View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14369_low_6 (Length: 320)
Name: NF14369_low_6
Description: NF14369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14369_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 35796974 - 35797274
Alignment:
| Q |
1 |
tagacaaacaatgagttatttaaattattcagttgtaggaaacttcaattggagcttcttaaaatgttgtaaaatgcgtagaatccaaatcaagtctaaa |
100 |
Q |
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| T |
35796974 |
tagacaaacaacgagttatttaaattatttagttgtaggaaacttcaattggagcttcttaaaatgttgtaaaatgcgtagaatccaaatcaagtctaaa |
35797073 |
T |
|
| Q |
101 |
ctagaaagaggcaattgaacccttatctcaaatacttactttatgttagaaagcttttcacttgtattccaggcaaaatttcatatcttctttcttttct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
35797074 |
ctagaaagaggcaattgaacccttatctcaaatacttactttatgttagaaagcttttcaattgtattccaggcaaaatttcatatcttctttcttttct |
35797173 |
T |
|
| Q |
201 |
atgagttatcttgtgtaatcacaac------------------catagtgaaaagtcaaagggcttgtttaagctagtagatttgagaagacaaagtcct |
282 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35797174 |
atgagttatcttgtgtaatcacaaccatttttttttattccatcatagtgaaaagtcaaagggcttgtttaagctagtagatttgagaagacaaagtcct |
35797273 |
T |
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| Q |
283 |
t |
283 |
Q |
| |
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| T |
35797274 |
t |
35797274 |
T |
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