View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14370_low_4 (Length: 246)
Name: NF14370_low_4
Description: NF14370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14370_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 5770816 - 5770627
Alignment:
| Q |
11 |
caaaggaaggaaatttttacagatctggatagtccaaattagaggatgcaataatgtacaatatatcactactcttatgattagccataaaagaaatttc |
110 |
Q |
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| T |
5770816 |
caaaggaaggaaatttttacagatctggatagtccaaattagaggatgcaataatgtacaatatatcactactcttatgattagccataaaagaaatttc |
5770717 |
T |
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| Q |
111 |
aatcgtggacaaaacctgatcggtgtttaatcgtctcaaaatcaaaaactaatcaaactactcaataagcaaatctacaaacactagaag |
200 |
Q |
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| T |
5770716 |
aaccgtggacaaaacctgatcggtgtttaatcgtctcaaaatcaaaaactaatcaaactactcaataagcaaatctacaaacactagaag |
5770627 |
T |
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