View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14371_high_10 (Length: 242)
Name: NF14371_high_10
Description: NF14371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14371_high_10 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 7864404 - 7864163
Alignment:
| Q |
1 |
aaagaatgcacaacatcgacaaaagtcacaaactttggtnnnnnnnnntttggtttgaatcttaccaatattcttttgcaggctggtgatagaggtacaa |
100 |
Q |
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||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
7864404 |
aaagaatgcacaacatcgacaaaagtcacaaaccttggtaaaaacaaatttggtttgaatcttaccaatattcttttgcaggttggtgatagaggtacaa |
7864305 |
T |
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| Q |
101 |
aactttcaggaggtcaaaagcaaagaattgcattggctagagcaatgataaaaaatcctaaaatccttcttttagatgaacctaccagtgctcttgatgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7864304 |
aactttcaggaggtcaaaagcaaagaattgcattggctagagcaatgataaaaaatcctaaaatccttcttttagatgaacctaccagtgctcttgatgc |
7864205 |
T |
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| Q |
201 |
cgagtcagaagctgcagttcaaagggccattgacaagatttc |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
7864204 |
cgagtcagaagctgcagttcaaagggccattgacaagatttc |
7864163 |
T |
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