View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14371_low_1 (Length: 607)

Name: NF14371_low_1
Description: NF14371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14371_low_1
NF14371_low_1
[»] chr6 (19 HSPs)
chr6 (280-598)||(1780571-1780889)
chr6 (429-598)||(29486475-29486642)
chr6 (433-527)||(24428827-24428919)
chr6 (480-592)||(22956378-22956490)
chr6 (480-592)||(23831902-23832014)
chr6 (429-508)||(29363531-29363609)
chr6 (488-593)||(21216466-21216571)
chr6 (306-434)||(33224522-33224650)
chr6 (303-434)||(29486224-29486355)
chr6 (465-598)||(31216217-31216346)
chr6 (306-405)||(904253-904352)
chr6 (430-574)||(903975-904115)
chr6 (429-508)||(34729857-34729935)
chr6 (304-434)||(22956637-22956766)
chr6 (304-434)||(23831626-23831755)
chr6 (357-427)||(24428622-24428692)
chr6 (374-434)||(8560093-8560153)
chr6 (305-343)||(27673842-27673880)
chr6 (462-537)||(8559901-8559972)
[»] chr3 (21 HSPs)
chr3 (280-598)||(40763664-40763982)
chr3 (281-598)||(20843116-20843432)
chr3 (280-597)||(3458006-3458324)
chr3 (480-592)||(52403212-52403324)
chr3 (305-434)||(16152063-16152191)
chr3 (429-548)||(17652934-17653051)
chr3 (480-592)||(11906529-11906641)
chr3 (306-434)||(19795412-19795540)
chr3 (434-556)||(16152317-16152437)
chr3 (429-598)||(29648421-29648590)
chr3 (430-589)||(35106430-35106584)
chr3 (429-494)||(21296014-21296078)
chr3 (463-593)||(38171470-38171603)
chr3 (429-494)||(46823886-46823950)
chr3 (364-410)||(11033972-11034018)
chr3 (371-425)||(29123428-29123482)
chr3 (350-434)||(35061864-35061948)
chr3 (493-536)||(36312281-36312324)
chr3 (304-424)||(52403473-52403595)
chr3 (462-537)||(19795661-19795732)
chr3 (456-536)||(37175495-37175573)
[»] chr7 (29 HSPs)
chr7 (281-598)||(13465310-13465627)
chr7 (281-598)||(28491167-28491484)
chr7 (281-524)||(25439566-25439806)
chr7 (429-598)||(34659394-34659561)
chr7 (429-576)||(29715764-29715909)
chr7 (429-528)||(37202823-37202921)
chr7 (480-592)||(25592182-25592294)
chr7 (303-433)||(37202571-37202700)
chr7 (429-556)||(758911-759036)
chr7 (429-508)||(46211663-46211741)
chr7 (429-548)||(48609052-48609169)
chr7 (495-600)||(14047081-14047188)
chr7 (495-600)||(14357111-14357218)
chr7 (306-434)||(45855342-45855470)
chr7 (371-425)||(27097050-27097104)
chr7 (371-425)||(27181199-27181253)
chr7 (365-411)||(29716051-29716097)
chr7 (280-434)||(40253844-40253998)
chr7 (553-598)||(25439521-25439566)
chr7 (317-434)||(25591918-25592035)
chr7 (364-427)||(34658929-34658992)
chr7 (456-592)||(37049134-37049269)
chr7 (451-508)||(83617-83673)
chr7 (429-494)||(39719961-39720025)
chr7 (488-536)||(20926818-20926866)
chr7 (373-411)||(20927083-20927121)
chr7 (459-513)||(40253630-40253683)
chr7 (560-592)||(40253551-40253583)
chr7 (453-501)||(45228050-45228098)
[»] chr1 (33 HSPs)
chr1 (281-598)||(30950737-30951054)
chr1 (1-280)||(31032929-31033206)
chr1 (273-600)||(29798978-29799305)
chr1 (434-576)||(11142697-11142837)
chr1 (440-598)||(33240790-33240946)
chr1 (434-555)||(10406128-10406247)
chr1 (430-598)||(47367882-47368049)
chr1 (434-576)||(10177922-10178062)
chr1 (467-588)||(52110936-52111056)
chr1 (446-526)||(28403123-28403202)
chr1 (429-508)||(44961470-44961548)
chr1 (313-432)||(47367639-47367757)
chr1 (429-538)||(19313401-19313508)
chr1 (305-434)||(23614402-23614530)
chr1 (434-556)||(23614656-23614776)
chr1 (429-576)||(1600502-1600650)
chr1 (371-434)||(29357169-29357232)
chr1 (430-574)||(46515613-46515753)
chr1 (306-405)||(21972199-21972298)
chr1 (429-494)||(15757758-15757822)
chr1 (369-434)||(19313217-19313281)
chr1 (430-574)||(21972436-21972576)
chr1 (322-434)||(10989447-10989559)
chr1 (305-405)||(11142442-11142541)
chr1 (478-592)||(5184626-5184737)
chr1 (429-494)||(10620145-10620209)
chr1 (371-434)||(5184891-5184954)
chr1 (371-434)||(10177734-10177796)
chr1 (369-404)||(44960909-44960944)
chr1 (462-592)||(10989152-10989281)
chr1 (456-537)||(27696506-27696583)
chr1 (456-537)||(24134376-24134455)
chr1 (371-434)||(46515441-46515505)
[»] chr2 (21 HSPs)
chr2 (281-598)||(16546206-16546523)
chr2 (292-598)||(45655875-45656180)
chr2 (383-569)||(39070152-39070338)
chr2 (370-590)||(37614532-37614754)
chr2 (429-598)||(42799084-42799253)
chr2 (282-397)||(39070355-39070459)
chr2 (442-574)||(4435287-4435417)
chr2 (278-424)||(26180406-26180551)
chr2 (280-434)||(8230376-8230531)
chr2 (18-104)||(30760458-30760544)
chr2 (453-592)||(21746085-21746221)
chr2 (12-109)||(13534994-13535092)
chr2 (478-591)||(14802654-14802768)
chr2 (281-434)||(35524913-35525066)
chr2 (38-105)||(30758317-30758384)
chr2 (557-598)||(39069978-39070019)
chr2 (357-416)||(42799360-42799420)
chr2 (459-513)||(35524694-35524747)
chr2 (305-401)||(4435024-4435120)
chr2 (560-592)||(35524615-35524647)
chr2 (492-556)||(38881794-38881857)
[»] chr8 (26 HSPs)
chr8 (281-598)||(12491418-12491735)
chr8 (429-598)||(18881858-18882025)
chr8 (429-598)||(38172699-38172870)
chr8 (434-576)||(38699683-38699823)
chr8 (281-434)||(6115131-6115284)
chr8 (281-434)||(32415644-32415797)
chr8 (440-555)||(43115234-43115347)
chr8 (436-573)||(13541357-13541491)
chr8 (436-573)||(13682982-13683116)
chr8 (429-598)||(41570441-41570609)
chr8 (304-426)||(41570189-41570311)
chr8 (480-592)||(6114873-6114984)
chr8 (377-434)||(38172982-38173039)
chr8 (429-534)||(40118144-40118247)
chr8 (350-434)||(1233756-1233840)
chr8 (371-425)||(5808853-5808907)
chr8 (429-494)||(4072227-4072291)
chr8 (429-494)||(21441593-21441657)
chr8 (350-434)||(13641112-13641196)
chr8 (350-434)||(13741524-13741608)
chr8 (437-475)||(33613707-33613745)
chr8 (429-494)||(41323181-41323245)
chr8 (456-537)||(1233564-1233641)
chr8 (456-537)||(13640920-13640997)
chr8 (456-537)||(13741332-13741409)
chr8 (377-418)||(43115046-43115087)
[»] chr4 (24 HSPs)
chr4 (281-598)||(22785880-22786196)
chr4 (292-598)||(6016739-6017044)
chr4 (292-598)||(2407018-2407324)
chr4 (429-598)||(21790774-21790943)
chr4 (429-598)||(54165869-54166031)
chr4 (429-598)||(52628294-52628465)
chr4 (305-434)||(48861760-48861888)
chr4 (429-576)||(8745633-8745778)
chr4 (488-583)||(17815897-17815992)
chr4 (306-434)||(21790525-21790652)
chr4 (429-508)||(48841184-48841262)
chr4 (480-598)||(11950592-11950710)
chr4 (434-556)||(48862014-48862134)
chr4 (364-434)||(52628100-52628170)
chr4 (281-434)||(8762829-8762982)
chr4 (312-407)||(48840949-48841043)
chr4 (371-427)||(54166160-54166216)
chr4 (350-434)||(16608578-16608662)
chr4 (429-494)||(43892522-43892586)
chr4 (462-513)||(8762614-8762664)
chr4 (459-513)||(5476394-5476447)
chr4 (390-427)||(856894-856931)
chr4 (560-592)||(5476315-5476347)
chr4 (560-592)||(8762535-8762567)
[»] chr5 (20 HSPs)
chr5 (292-598)||(40528085-40528392)
chr5 (430-598)||(16908551-16908717)
chr5 (451-598)||(40360936-40361080)
chr5 (292-433)||(16908840-16908979)
chr5 (465-593)||(7008942-7009069)
chr5 (429-556)||(34034105-34034230)
chr5 (434-555)||(17695850-17695969)
chr5 (429-598)||(19948752-19948915)
chr5 (364-434)||(22098943-22099013)
chr5 (429-508)||(41640054-41640132)
chr5 (276-434)||(3498684-3498842)
chr5 (305-434)||(34033839-34033967)
chr5 (429-494)||(13517580-13517644)
chr5 (429-494)||(17768976-17769040)
chr5 (430-574)||(42353164-42353304)
chr5 (372-434)||(19949035-19949097)
chr5 (430-535)||(14521651-14521753)
chr5 (281-331)||(7008761-7008811)
chr5 (560-592)||(3498391-3498423)
chr5 (371-434)||(42352990-42353054)
[»] scaffold0186 (1 HSPs)
scaffold0186 (429-598)||(22726-22893)
[»] scaffold0795 (1 HSPs)
scaffold0795 (2-150)||(5044-5190)
[»] scaffold0361 (1 HSPs)
scaffold0361 (294-434)||(6917-7056)
[»] scaffold0002 (2 HSPs)
scaffold0002 (430-525)||(428333-428426)
scaffold0002 (371-434)||(428548-428611)
[»] scaffold0110 (1 HSPs)
scaffold0110 (372-434)||(7097-7159)
[»] scaffold0005 (1 HSPs)
scaffold0005 (429-575)||(292188-292332)
[»] scaffold0481 (2 HSPs)
scaffold0481 (429-502)||(6701-6773)
scaffold0481 (365-411)||(6516-6562)
[»] scaffold1554 (1 HSPs)
scaffold1554 (451-569)||(819-935)
[»] scaffold0271 (1 HSPs)
scaffold0271 (321-434)||(20141-20255)


Alignment Details
Target: chr6 (Bit Score: 299; Significance: 1e-168; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 280 - 598
Target Start/End: Complemental strand, 1780889 - 1780571
Alignment:
Q  280 gcaggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctacccca 379  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1780889 gcaggggcgcagcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaatgagttggtgtaaattaatattcggctacccca 1780790  T
Q  380 aataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgttt 479  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1780789 tataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataaccaatttgttt 1780690  T
Q  480 tacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctat 579  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1780689 tacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctat 1780590  T
Q  580 tgtcaatttttatcctttg 598  Q
     ||||||||||||||||||    
T  1780589 cgtcaatttttatcctttg 1780571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 429 - 598
Target Start/End: Original strand, 29486475 - 29486642
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgg 528  Q
    |||||||||||||| |||||| | ||||||||||||||||||||||| | |||||||| |||| | |||| |||||||||||||||||||||||||||||    
T  29486475 cataaacaaattaattggacaat-agtttcttgcaaataacctattt-tcttacattgaaaaatatattaataatctatttagtaaacggtcaattatgg 29486572  T
Q  529 ataaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    ||||| |||  ||||||||||| ||||  |||||||||| |||||| |||||||||||||||||| ||||    
T  29486573 ataaatttgacttcttgaaatgtatttgccacaacttttctaaataactattgtcaatttttatcatttg 29486642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 433 - 527
Target Start/End: Original strand, 24428827 - 24428919
Alignment:
Q  433 aacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatg 527  Q
    ||||||||||||||||||||||||||||| |||||||||||||| || |||||| ||||||||||||||||||||||||| |||||||| |||||    
T  24428827 aacaaattaaatggacattgagtttcttgaaaataacctatttg-ttaacattgaaaaagacattattaatctatttagt-aacggtcagttatg 24428919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 480 - 592
Target Start/End: Complemental strand, 22956490 - 22956378
Alignment:
Q  480 tacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctat 579  Q
    |||||||||||| | ||||||||||||||| |||||  |||| |||||||||||||||| |||||||||  |||||||   |||||||||||||||||||    
T  22956490 tacattggaaaatatattattaatctattttgtaaatagtcatttatggataaaattgggttcttgaaacacattttatcaaacttttttaaatagctat 22956391  T
Q  580 tgtcaatttttat 592  Q
     ||||||||||||    
T  22956390 cgtcaatttttat 22956378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 480 - 592
Target Start/End: Original strand, 23831902 - 23832014
Alignment:
Q  480 tacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctat 579  Q
    |||||||||||| | ||||||||||||||| |||||  |||| |||||||||||||||| |||||||||  |||||||   |||||||||||||||||||    
T  23831902 tacattggaaaatatattattaatctattttgtaaatagtcatttatggataaaattgggttcttgaaacacattttatcaaacttttttaaatagctat 23832001  T
Q  580 tgtcaatttttat 592  Q
     ||||||||||||    
T  23832002 cgtcaatttttat 23832014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 508
Target Start/End: Complemental strand, 29363609 - 29363531
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatt 508  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  29363609 catagacaaattaaatgtacaatgagtttcttgcaaataacctattt-atttacatttgaaaagacattattaatctatt 29363531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 593
Target Start/End: Original strand, 21216466 - 21216571
Alignment:
Q  488 aaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaatt 587  Q
    |||||||||||||||||||||| |||||  |||| |||||||||||||| | || |||||   |||||||   ||||||||||||||||||| |||||||    
T  21216466 aaaagacattattaatctattttgtaaatagtcatttatggataaaatttgctttttgaatcacattttatctaacttttttaaatagctatcgtcaatt 21216565  T
Q  588 tttatc 593  Q
    ||||||    
T  21216566 tttatc 21216571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 306 - 434
Target Start/End: Original strand, 33224522 - 33224650
Alignment:
Q  306 ggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaaa 405  Q
    ||||||||| | |||||||||||| | | | || |||| |||  |||||| || ||| |||||  |||||||||||||||||| |||||||||||| |||    
T  33224522 ggggtagcccttgctaccccaaaataaaaaatattcttaaattggttggtatatatttatatttagctaccccaaataataaatattgagctaccctaaa 33224621  T
Q  406 caaattcagttgtcgaaaattaacataaa 434  Q
    ||| ||  |||||||||||||||||||||    
T  33224622 caagtttggttgtcgaaaattaacataaa 33224650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 303 - 434
Target Start/End: Original strand, 29486224 - 29486355
Alignment:
Q  303 caaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctacccc 402  Q
    ||||||||||||||||||||||||||||||||| || |||| |||   ||||| |||| | ||||  ||||||| |||||||||||||| ||||||  ||    
T  29486224 caaggggtagccttggctaccccaaaaaatatactattcttcaattgtttggtataaaattatatctggctacctcaaataataaacatcgagctattcc 29486323  T
Q  403 aaacaaattcagttgtcgaaaattaacataaa 434  Q
    ||| ||||| | ||||   |||||||||||||    
T  29486324 aaataaatttaattgtaagaaattaacataaa 29486355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 465 - 598
Target Start/End: Complemental strand, 31216346 - 31216217
Alignment:
Q  465 ataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaact 564  Q
    ||||||||||||| | ||||||||||| |   ||||||||||||| |||||  |||| |||||||||||||||| |||||||||  ||||||   |||||    
T  31216346 ataacctatttgtgt-acattggaaaata---tattaatctattttgtaaatagtcatttatggataaaattggcttcttgaaacacattttgtccaact 31216251  T
Q  565 tttttaaatagctattgtcaatttttatcctttg 598  Q
     ||||||||||||||| |||| ||||||| ||||    
T  31216250 attttaaatagctattttcaagttttatcatttg 31216217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 306 - 405
Target Start/End: Complemental strand, 904352 - 904253
Alignment:
Q  306 ggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaaa 405  Q
    ||||||||||| |||||||||||||||| |||| |||| |||  |||| | |||| | | |||  |||||||||||||||||| ||||||||||||||||    
T  904352 ggggtagcctttgctaccccaaaaaataaattattcttgaattggttgatataaaattacatttagctaccccaaataataaatattgagctaccccaaa 904253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 430 - 574
Target Start/End: Complemental strand, 904115 - 903975
Alignment:
Q  430 ataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgga 529  Q
    |||||||||||||| ||||| | ||||| ||| ||||||| | ||||||| |||||| ||||  ||||| |||| |||||| ||||||||||||||||||    
T  904115 ataaacaaattaaaaggacaataagttt-ttgaaaataacttgtttgttt-acattgaaaaa--cattaataatttatttattaaacggtcaattatgga 904020  T
Q  530 taaaattggtttcttgaaatgcattttacacaacttttttaaata 574  Q
    |||||||   ||||| |||| |||||| | ||  |||||||||||    
T  904019 taaaatttacttcttaaaatacattttgcccacattttttaaata 903975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 508
Target Start/End: Original strand, 34729857 - 34729935
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatt 508  Q
    |||| |||| ||||||| ||| |||||||||||||||||||||||||  || |||||  |||||||||||||||||||||    
T  34729857 catagacaagttaaatgtacaatgagtttcttgcaaataacctattt-attaacatttaaaaagacattattaatctatt 34729935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 304 - 434
Target Start/End: Complemental strand, 22956766 - 22956637
Alignment:
Q  304 aaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctacccca 403  Q
    ||||||||| ||||||||||| ||||||   |||| ||||  || ||||||| |  ||  |||| | |||||||||||||||||| ||||||||||||||    
T  22956766 aaggggtagtcttggctacccaaaaaaaataattattcttgtattagttggtatgtatctatatccagctaccccaaataataaaaattgagctacccca 22956667  T
Q  404 aacaaattcagttgtcgaaaattaacataaa 434  Q
    ||||| || ||||| | |||| |||||||||    
T  22956666 aacaagtttagttg-ccaaaaataacataaa 22956637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 304 - 434
Target Start/End: Original strand, 23831626 - 23831755
Alignment:
Q  304 aaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctacccca 403  Q
    ||||||||| ||||||||||| ||||||   |||| ||||  || ||||||| |  ||  |||| | |||||||||||||||||| ||||||||||||||    
T  23831626 aaggggtagtcttggctacccaaaaaaaataattattcttgtattagttggtatgtatctatatccagctaccccaaataataaaaattgagctacccca 23831725  T
Q  404 aacaaattcagttgtcgaaaattaacataaa 434  Q
    ||||| || ||||| | |||| |||||||||    
T  23831726 aacaagtttagttg-ccaaaaataacataaa 23831755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 357 - 427
Target Start/End: Original strand, 24428622 - 24428692
Alignment:
Q  357 taaattaatattcggctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaatta 427  Q
    |||||| |||| ||| ||||| ||||||||||||||||  ||||| ||||||||||||||| |||||||||    
T  24428622 taaatttatatccggttaccctaaataataaacattgaattaccctaaacaaattcagttgccgaaaatta 24428692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 434
Target Start/End: Complemental strand, 8560153 - 8560093
Alignment:
Q  374 accccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    ||||||||||||||| |||||||||||||||| || ||  |||| ||||||||||||||||    
T  8560153 accccaaataataaatattgagctaccccaaataagtttggttgccgaaaattaacataaa 8560093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 343
Target Start/End: Original strand, 27673842 - 27673880
Alignment:
Q  305 aggggtagccttggctaccccaaaaaatatattaatctt 343  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  27673842 aggggtagccttggctaccccaaaaaaaatattattctt 27673880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 462 - 537
Target Start/End: Complemental strand, 8559972 - 8559901
Alignment:
Q  462 caaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattg 537  Q
    |||||||||||||   ||||||||| ||||||||||| |||||| |||| |||||  |||||||||||||||||||    
T  8559972 caaataacctattg--tttacattg-aaaagacattagtaatct-tttattaaacaatcaattatggataaaattg 8559901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 299; Significance: 1e-168; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 280 - 598
Target Start/End: Original strand, 40763664 - 40763982
Alignment:
Q  280 gcaggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctacccca 379  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40763664 gcaggggcgcaacccttcattgacaagaggtagccttggttaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctacccca 40763763  T
Q  380 aataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgttt 479  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40763764 aataataaacattgagctatcccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgttt 40763863  T
Q  480 tacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctat 579  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40763864 tacattggaaaaaacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctat 40763963  T
Q  580 tgtcaatttttatcctttg 598  Q
    |||||||||||||||||||    
T  40763964 tgtcaatttttatcctttg 40763982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 281 - 598
Target Start/End: Complemental strand, 20843432 - 20843116
Alignment:
Q  281 caggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaa 380  Q
    |||||||| | ||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||  |||||| |||||| || ||||||||||||||    
T  20843432 caggggcgtagccctttattggcaaggggtagccttggctaccccaaaaaatatattaatatttaattggttggtataaatttattttcggctaccccaa 20843333  T
Q  381 ataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgtttt 480  Q
    |||||||||||||||||||||||||||||||||||||||||||  || ||||||||| ||||||||||||||| |||||||||||||||||||||| |||    
T  20843332 ataataaacattgagctaccccaaacaaattcagttgtcgaaagctagcataaacaatttaaatggacattgaatttcttgcaaataacctatttg-ttt 20843234  T
Q  481 acattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctatt 580  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  20843233 acattggaaaagacattattaatctatttagtaaatggtctattatggataaaattggcttcttgaaatgcattttacccaacttttttaaatagctatt 20843134  T
Q  581 gtcaatttttatcctttg 598  Q
    || |||| ||||||||||    
T  20843133 gttaattcttatcctttg 20843116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 280 - 597
Target Start/End: Complemental strand, 3458324 - 3458006
Alignment:
Q  280 gcaggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctacccca 379  Q
    ||||||||| | |||||||||| |||  ||||||||||||||||| ||||||||||||||||||||||   ||||| |||||| ||||||||||||||||    
T  3458324 gcaggggcgtagcccttcattggcaacaggtagccttggctacccaaaaaaatatattaatctttaattgtttggtctaaatttatattcggctacccca 3458225  T
Q  380 aataataaacattgagcta--ccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgt 477  Q
     |||||||| |||||| ||  ||||||  ||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  3458224 tataataaatattgagatataccccaagtaaattcagttgccgaaaattagcataaacaaattaaatggatattgagtttcttgcaaataacttatttgt 3458125  T
Q  478 tttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagct 577  Q
    || ||| |||| |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||  ||||||| |||| |||||||||||      
T  3458124 tt-acactggagaagacattattaatttatctagtaaacggtcaattatagataaaattggtttcttgaaatttattttacccaacctttttaaatagtc 3458026  T
Q  578 attgtcaatttttatccttt 597  Q
     |||||||||||||||||||    
T  3458025 gttgtcaatttttatccttt 3458006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 480 - 592
Target Start/End: Complemental strand, 52403324 - 52403212
Alignment:
Q  480 tacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctat 579  Q
    |||||||||||| | ||||||||||||||| |||||  |||| |||||||||||||||| |||||||||  |||||||  ||||||||||||||||||||    
T  52403324 tacattggaaaatatattattaatctattttgtaaatagtcatttatggataaaattgggttcttgaaacacattttatccaacttttttaaatagctat 52403225  T
Q  580 tgtcaatttttat 592  Q
     ||||||||||||    
T  52403224 cgtcaatttttat 52403212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 305 - 434
Target Start/End: Original strand, 16152063 - 16152191
Alignment:
Q  305 aggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaa 404  Q
    |||||||||||||||||||||||||||  ||||| |||| ||| | | ||| || ||| |||| ||||||||||||||||||||||||||||||||||||    
T  16152063 aggggtagccttggctaccccaaaaaaagtattattcttgaattaatcggtatatatttatatccggctaccccaaataataaacattgagctaccccaa 16152162  T
Q  405 acaaattcagttgtcgaaaattaacataaa 434  Q
    | || || ||||| | ||||||| ||||||    
T  16152163 ataagtttagttg-caaaaattagcataaa 16152191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 548
Target Start/End: Complemental strand, 17653051 - 17652934
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgg 528  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||  || ||||| |||||||||||||||||||| ||| |||||   ||||||| |    
T  17653051 catagacaaattaaatgtacaatgagtttcttgcaaataacctattt-attaacatttgaaaagacattattaatcta-ttattaaacaaacaattattg 17652954  T
Q  529 ataaaattggtttcttgaaa 548  Q
    || ||||||| |||||||||    
T  17652953 atgaaattgggttcttgaaa 17652934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 480 - 592
Target Start/End: Complemental strand, 11906641 - 11906529
Alignment:
Q  480 tacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctat 579  Q
    ||||||| |||| | ||||||||||||||| |||||  |||| ||||| ||||||||||  ||||||||  ||||| |  ||||||||||||||||||||    
T  11906641 tacattgaaaaatatattattaatctattttgtaaattgtcatttatgaataaaattgggctcttgaaacacatttcatccaacttttttaaatagctat 11906542  T
Q  580 tgtcaatttttat 592  Q
     ||||||||||||    
T  11906541 cgtcaatttttat 11906529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 306 - 434
Target Start/End: Original strand, 19795412 - 19795540
Alignment:
Q  306 ggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaaa 405  Q
    ||||||||| | |||||||||||| | | | || |||| |||  |||||| || ||| |||||  ||||| |||||||||||| ||||||||||||||||    
T  19795412 ggggtagcccttgctaccccaaaataaaaaatattcttgaattggttggtatatatttatatttagctactccaaataataaatattgagctaccccaaa 19795511  T
Q  406 caaattcagttgtcgaaaattaacataaa 434  Q
    ||| ||  |||||||||||||||||||||    
T  19795512 caagtttggttgtcgaaaattaacataaa 19795540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 434 - 556
Target Start/End: Original strand, 16152317 - 16152437
Alignment:
Q  434 acaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaa 533  Q
    ||||||||||  |||| ||||||||||||||||||| |||||  ||||||||  ||||| ||||||||||||| ||| ||||| | ||||||| ||| ||    
T  16152317 acaaattaaacagacaatgagtttcttgcaaataacatattt-atttacatttaaaaagtcattattaatcta-ttattaaacagacaattattgatgaa 16152414  T
Q  534 attggtttcttgaaatgcatttt 556  Q
    ||||| ||||| |||||||||||    
T  16152415 attgggttcttcaaatgcatttt 16152437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 429 - 598
Target Start/End: Original strand, 29648421 - 29648590
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtca--attat 526  Q
    ||||| ||||||||| ||||| |  |||| |||||||| |  | ||||||| | |||| |||||| ||||||||| ||||||||||||  |||  |||||    
T  29648421 cataatcaaattaaacggacaataggtttattgcaaatgatttctttgttt-atattgaaaaagagattattaatttatttagtaaacaatcaatattat 29648519  T
Q  527 ggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    |||||||||||  ||||| |||| |||||| | |||||||| | |||| ||||||||||||||||| |||||    
T  29648520 ggataaaattgacttcttaaaatccattttgctcaacttttct-aataactattgtcaatttttattctttg 29648590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 430 - 589
Target Start/End: Complemental strand, 35106584 - 35106430
Alignment:
Q  430 ataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgga 529  Q
    |||||||||||||| ||||| | ||||| ||| |||| |||| ||| ||| |||||| ||||  ||||| ||||||||||| ||||| ||||||||||||    
T  35106584 ataaacaaattaaaaggacaataagttt-ttgaaaattacctgtttcttt-acattgaaaaa--cattaataatctatttattaaacagtcaattatgga 35106489  T
Q  530 taaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaatttt 589  Q
    ||||||||  ||||| ||||   |||| | ||| ||||||||||| || |||||||||||    
T  35106488 taaaattgacttcttaaaatatgttttgcccaaattttttaaata-cttttgtcaatttt 35106430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 429 - 494
Target Start/End: Original strand, 21296014 - 21296078
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagac 494  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||  |||||||| ||||||||    
T  21296014 catagacaaattaaatgtacaatgagtttcttgcaaataacctattt-atttacatttgaaaagac 21296078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 463 - 593
Target Start/End: Original strand, 38171470 - 38171603
Alignment:
Q  463 aaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaa----ttatggataaaattggtttcttgaaatgcattttac 558  Q
    ||||||||||||||| | | ||| ||||||||||||||||||||||| ||||||  ||||    |||||||||||||||  || || |||  ||||||      
T  38171470 aaataacctatttgtgtaa-attagaaaagacattattaatctattttgtaaacaatcaatcatttatggataaaattgactttttaaaacacattttgt 38171568  T
Q  559 acaacttttttaaatagctattgtcaatttttatc 593  Q
     |||||||||| |||||||||| | ||||||||||    
T  38171569 tcaacttttttgaatagctatttttaatttttatc 38171603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 429 - 494
Target Start/End: Original strand, 46823886 - 46823950
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagac 494  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||  |||||||| ||||||||    
T  46823886 catagacaaattaaatgtacaatgagtttcttgcaaataacctattt-atttacatttgaaaagac 46823950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 410
Target Start/End: Complemental strand, 11034018 - 11033972
Alignment:
Q  364 atattcggctaccccaaataataaacattgagctaccccaaacaaat 410  Q
    |||| ||| |||| |||||||||||||||||||||||||||||||||    
T  11034018 atatccggttacctcaaataataaacattgagctaccccaaacaaat 11033972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 425
Target Start/End: Original strand, 29123428 - 29123482
Alignment:
Q  371 gctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaat 425  Q
    |||||||||||||||||| ||||||||| |||||| |||||  ||||||||||||    
T  29123428 gctaccccaaataataaatattgagctatcccaaataaatttcgttgtcgaaaat 29123482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 434
Target Start/End: Original strand, 35061864 - 35061948
Alignment:
Q  350 gttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    |||||| || ||| |||||  |||||| ||||||||||| |||||||||| | ||| || ||  |||||||||||||||||||||    
T  35061864 gttggtatatatttatatttagctacctcaaataataaatattgagctactctaaataagtttggttgtcgaaaattaacataaa 35061948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 536
Target Start/End: Complemental strand, 36312324 - 36312281
Alignment:
Q  493 acattattaatctatttagtaaacggtcaattatggataaaatt 536  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||    
T  36312324 acattaataatctatttattaaacagtcaattatggataaaatt 36312281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 424
Target Start/End: Complemental strand, 52403595 - 52403473
Alignment:
Q  304 aaggggtagccttggctaccccaaaaaat--atattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccc 401  Q
    ||||||||||||| ||||||| ||||||   |||||| ||||  || ||||||| |  ||  |||| | ||||||| ||||||||||||||||| |||||    
T  52403595 aaggggtagccttagctacccaaaaaaaataatattattcttgtattagttggtatgtatctatatccagctaccctaaataataaacattgagataccc 52403496  T
Q  402 caaacaaattcagttgtcgaaaa 424  Q
     ||| || |||||||||| ||||    
T  52403495 taaataagttcagttgtcaaaaa 52403473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 462 - 537
Target Start/End: Original strand, 19795661 - 19795732
Alignment:
Q  462 caaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattg 537  Q
    |||||||||||||   ||||||||| ||||||||||| |||||| |||| |||||  |||||||||||||||||||    
T  19795661 caaataacctattg--tttacattg-aaaagacattagtaatct-tttattaaacaatcaattatggataaaattg 19795732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 536
Target Start/End: Original strand, 37175495 - 37175573
Alignment:
Q  456 ttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaatt 536  Q
    ||||||||||||| |||||| ||| |||||  ||||||||||| ||||||||||| ||| |  | ||||||||||||||||    
T  37175495 ttcttgcaaataatctatttattt-acatta-aaaagacattaataatctatttattaatcatttaattatggataaaatt 37175573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 290; Significance: 1e-162; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 281 - 598
Target Start/End: Original strand, 13465310 - 13465627
Alignment:
Q  281 caggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaa 380  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13465310 caggggtgcaacccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaa 13465409  T
Q  381 ataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgtttt 480  Q
    ||||| ||||||||||||||| ||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13465410 ataattaacattgagctaccctaaacaaattcagtttccgaaatttaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgtttt 13465509  T
Q  481 acattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctatt 580  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13465510 acattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctatt 13465609  T
Q  581 gtcaatttttatcctttg 598  Q
    ||||||||||||||||||    
T  13465610 gtcaatttttatcctttg 13465627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 281 - 598
Target Start/End: Original strand, 28491167 - 28491484
Alignment:
Q  281 caggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaa 380  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  28491167 caggggcgcagcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattgatactcggctaccccaa 28491266  T
Q  381 ataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgtttt 480  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28491267 ataataaacattgagctatcccaaacaaattcagttgccgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttatttt 28491366  T
Q  481 acattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctatt 580  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28491367 acattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaaattttttaaatagctatt 28491466  T
Q  581 gtcaatttttatcctttg 598  Q
    ||||||||||||||||||    
T  28491467 gtcaatttttatcctttg 28491484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 281 - 524
Target Start/End: Complemental strand, 25439806 - 25439566
Alignment:
Q  281 caggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaa 380  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25439806 caggggcgcagcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaa 25439707  T
Q  381 ataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgtttt 480  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  25439706 ataataaatattgagctaccccgaacaaattcagttgccgaaaattaacataaacaaattaaatggacattgagtttcttgca---aacctatttgtttt 25439610  T
Q  481 acattggaaaagacattattaatctatttagtaaacggtcaatt 524  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25439609 acattggaaaagacattattaatctatttagtaaacggtcaatt 25439566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 429 - 598
Target Start/End: Original strand, 34659394 - 34659561
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgg 528  Q
    ||||||||||||||||||| | ||||||| ||||||||||| |||| |||| |||||  |||| ||||||||||||||||||||||||  |||||||| |    
T  34659394 cataaacaaattaaatggataatgagtttattgcaaataacttattagttt-acatttaaaaatacattattaatctatttagtaaacactcaattatag 34659492  T
Q  529 ataaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    ||||||||||||||||||||||||||||   ||| |||| | |||||| ||||| ||||||| |||||||    
T  34659493 ataaaattggtttcttgaaatgcattttgtccaaattttct-aatagccattgtaaatttttgtcctttg 34659561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 429 - 576
Target Start/End: Complemental strand, 29715909 - 29715764
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgg 528  Q
    |||| |||||||||||||||  ||||||||||| |||||||||||||  |||||||| |||||||||||||||||||| ||| ||||| ||| ||||| |    
T  29715909 catagacaaattaaatggacggtgagtttcttgtaaataacctattt-atttacatttgaaaagacattattaatcta-ttattaaacagtctattattg 29715812  T
Q  529 ataaaattggtttcttgaaatgcattttacacaacttttttaaatagc 576  Q
    || ||||||| ||||||||| ||||||| | |||| ||| ||||||||    
T  29715811 atgaaattgggttcttgaaacgcattttgcccaacgtttctaaatagc 29715764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 429 - 528
Target Start/End: Original strand, 37202823 - 37202921
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgg 528  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||  ||||| |||||||||||||||||||||||||| ||| |||||    
T  37202823 cataaacaaattaaatggacattcagtttcttgcaaataatctatttg-tttacatcagaaaaaacattattaatctatttagtaaacggccaactatgg 37202921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 480 - 592
Target Start/End: Original strand, 25592182 - 25592294
Alignment:
Q  480 tacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctat 579  Q
    ||||||| |||| | ||||||||||||||| |||||  |||| |||||||||||||||| |||||||||  |||||||  ||||||||||||||||||||    
T  25592182 tacattgcaaaatatattattaatctattttgtaaatagtcatttatggataaaattgggttcttgaaacacattttatccaacttttttaaatagctat 25592281  T
Q  580 tgtcaatttttat 592  Q
     ||||||||||||    
T  25592282 cgtcaatttttat 25592294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 303 - 433
Target Start/End: Original strand, 37202571 - 37202700
Alignment:
Q  303 caaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctacccc 402  Q
    |||||||||||||||||||||| ||||||||||||| |||| |||  |||||| || ||| |||| | ||| |||||||||||||| ||| ||| | | |    
T  37202571 caaggggtagccttggctaccc-aaaaaatatattattcttcaattggttggtatatatttatatcctgctgccccaaataataaatattaagccatctc 37202669  T
Q  403 aaacaaattcagttgtcgaaaattaacataa 433  Q
    ||||||||| |||||||||||||||||||||    
T  37202670 aaacaaatttagttgtcgaaaattaacataa 37202700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 556
Target Start/End: Original strand, 758911 - 759036
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgg 528  Q
    |||| |||||||||||| ||| |||||||||||||||||| ||||||  |||||||| |||||||||||||||||||| ||| |||||   ||||||| |    
T  758911 catagacaaattaaatgtacaatgagtttcttgcaaataatctattt-atttacatttgaaaagacattattaatcta-ttattaaacaaacaattattg 759008  T
Q  529 ataaaattggtttcttgaaatgcatttt 556  Q
    || ||||| | ||||||||||| |||||    
T  759009 atgaaattcggttcttgaaatgtatttt 759036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 508
Target Start/End: Complemental strand, 46211741 - 46211663
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatt 508  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  46211741 catagacaaattaaatgtacaatgagtttcttgcaaataacctattt-atttacatttgaaaagacattattaatctatt 46211663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 429 - 548
Target Start/End: Complemental strand, 48609169 - 48609052
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgg 528  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||  || ||||| ||||| |||||||||||||| ||| |||||   ||||||| |    
T  48609169 catagacaaattaaatgtacaatgagtttcttgcaaataacctattt-attaacatttgaaaacacattattaatcta-ttattaaacaaacaattattg 48609072  T
Q  529 ataaaattggtttcttgaaa 548  Q
    || ||||||| |||||||||    
T  48609071 atgaaattgggttcttgaaa 48609052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 495 - 600
Target Start/End: Original strand, 14047081 - 14047188
Alignment:
Q  495 attattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaac--ttttttaaatagctattgtcaatttttat 592  Q
    ||||||||||||||| |||||  |||| |||||| |||||||||||||||||||  ||||||   ||||  |||||||||||| || |||||||||||||    
T  14047081 attattaatctattttgtaaatagtcatttatggctaaaattggtttcttgaaacacattttgtccaacttttttttaaatagttactgtcaatttttat 14047180  T
Q  593 cctttgct 600  Q
    | ||||||    
T  14047181 catttgct 14047188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 495 - 600
Target Start/End: Original strand, 14357111 - 14357218
Alignment:
Q  495 attattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaac--ttttttaaatagctattgtcaatttttat 592  Q
    ||||||||||||||| |||||  |||| |||||| |||||||||||||||||||  ||||||   ||||  |||||||||||| || |||||||||||||    
T  14357111 attattaatctattttgtaaatagtcatttatggctaaaattggtttcttgaaacacattttgtccaacttttttttaaatagttactgtcaatttttat 14357210  T
Q  593 cctttgct 600  Q
    | ||||||    
T  14357211 catttgct 14357218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 434
Target Start/End: Original strand, 45855342 - 45855470
Alignment:
Q  306 ggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaaa 405  Q
    ||||||||| | |||||||||||| | | | || |||| |||  || ||| || ||| |||||  |||||||||||||||||| ||||||||||||||||    
T  45855342 ggggtagcccttgctaccccaaaagaaaaaatattcttgaattggtcggtatatatttatatttagctaccccaaataataaatattgagctaccccaaa 45855441  T
Q  406 caaattcagttgtcgaaaattaacataaa 434  Q
     || ||  |||||||||||||||||||||    
T  45855442 taagtttggttgtcgaaaattaacataaa 45855470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 425
Target Start/End: Original strand, 27097050 - 27097104
Alignment:
Q  371 gctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaat 425  Q
    |||||||||||||||||| ||||||||||||||||||||||  ||||||||||||    
T  27097050 gctaccccaaataataaatattgagctaccccaaacaaatttggttgtcgaaaat 27097104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 425
Target Start/End: Complemental strand, 27181253 - 27181199
Alignment:
Q  371 gctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaat 425  Q
    |||||||||||||||||| ||||||||||||||||||||||  ||||||||||||    
T  27181253 gctaccccaaataataaatattgagctaccccaaacaaatttggttgtcgaaaat 27181199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 365 - 411
Target Start/End: Complemental strand, 29716097 - 29716051
Alignment:
Q  365 tattcggctaccccaaataataaacattgagctaccccaaacaaatt 411  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  29716097 tattcggctaccccaaataataaatattgagctaccccaaacaaatt 29716051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 280 - 434
Target Start/End: Complemental strand, 40253998 - 40253844
Alignment:
Q  280 gcaggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctacccca 379  Q
    |||||||||  ||||||||||  || | ||||||| |||||||||||||||| |||||  |||| |||| |||||| |   || |||||  |||| ||||    
T  40253998 gcaggggcggttcccttcattagcatgaggtagccatggctaccccaaaaaaaatattgttcttgaatatgttggtatgtttttatatttagctatccca 40253899  T
Q  380 aataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    ||||| ||| ||| |||||||||||| ||||| | ||||  ||||||||||||||    
T  40253898 aataaaaaatatttagctaccccaaataaatttatttgttaaaaattaacataaa 40253844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 553 - 598
Target Start/End: Complemental strand, 25439566 - 25439521
Alignment:
Q  553 ttttacacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  25439566 ttttacacaacttttttaaatagctattgttaatttttatcctttg 25439521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 25591918 - 25592035
Alignment:
Q  317 ggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaaacaaattcagtt 416  Q
    ||||||||||||||| |||||| ||||  || ||||||| |  ||  |||| | |||||||||||||||||| |||||||||| |||||||| |||||||    
T  25591918 ggctaccccaaaaaaaatattattcttgtattagttggtatgtatctatatccagctaccccaaataataaatattgagctactccaaacaagttcagtt 25592017  T
Q  417 gtcgaaaattaacataaa 434  Q
    | | ||||  ||||||||    
T  25592018 gccaaaaaacaacataaa 25592035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 427
Target Start/End: Original strand, 34658929 - 34658992
Alignment:
Q  364 atattcggctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaatta 427  Q
    |||||| ||||||| |||||||| |||||||||||| |||||||| ||||||||| ||||||||    
T  34658929 atattccgctaccctaaataatatacattgagctactccaaacaagttcagttgttgaaaatta 34658992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 456 - 592
Target Start/End: Original strand, 37049134 - 37049269
Alignment:
Q  456 ttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgca--t 553  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||||||| |||| ||||| || |||||   |||||||||| ||||| |||  ||  |    
T  37049134 ttcttacaaataacctatttgttt-acattg-aaaagacattattaatctttttattaaacagttaattacaaataaaattggcttctt-aaaaacatgt 37049230  T
Q  554 tttacacaacttttttaaatagctattgtcaatttttat 592  Q
    ||| | |||||||||||||||  | ||||||||||||||    
T  37049231 tttgcccaacttttttaaatatttgttgtcaatttttat 37049269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 451 - 508
Target Start/End: Complemental strand, 83673 - 83617
Alignment:
Q  451 tgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatt 508  Q
    ||||||||||| ||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  83673 tgagtttcttgtaaataacctatttattt-acatttgaaaagacattattaatctatt 83617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 429 - 494
Target Start/End: Original strand, 39719961 - 39720025
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagac 494  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||  |||||||| ||||||||    
T  39719961 catagacaaattaaatgtacaatgagtttcttgcaaataacctattt-atttacatttgaaaagac 39720025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 536
Target Start/End: Complemental strand, 20926866 - 20926818
Alignment:
Q  488 aaaagacattattaatctatttagtaaacggtcaattatggataaaatt 536  Q
    |||| |||||| ||||||||||| ||||| |||||||||||||||||||    
T  20926866 aaaaaacattaataatctatttattaaacagtcaattatggataaaatt 20926818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 411
Target Start/End: Complemental strand, 20927121 - 20927083
Alignment:
Q  373 taccccaaataataaacattgagctaccccaaacaaatt 411  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  20927121 taccccaaataataaatattgagctaccccaaataaatt 20927083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 40253683 - 40253630
Alignment:
Q  459 ttgcaaataacctatttgttttacattggaaaagacattattaatctatttagta 513  Q
    ||||||||||  ||||||||| |||||| |||||||||||||| |||||||||||    
T  40253683 ttgcaaataatttatttgttt-acattgaaaaagacattattagtctatttagta 40253630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 560 - 592
Target Start/End: Complemental strand, 40253583 - 40253551
Alignment:
Q  560 caacttttttaaatagctattgtcaatttttat 592  Q
    |||||||||||||||| ||||||||||||||||    
T  40253583 caacttttttaaatagttattgtcaatttttat 40253551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 45228050 - 45228098
Alignment:
Q  453 agtttcttgcaaataacctatttgttttacattggaaaagacattatta 501  Q
    |||||||| |||||||| |||||  ||||||||| ||||||||||||||    
T  45228050 agtttcttacaaataacttattttgtttacattgaaaaagacattatta 45228098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 290; Significance: 1e-162; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 281 - 598
Target Start/End: Complemental strand, 30951054 - 30950737
Alignment:
Q  281 caggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaa 380  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  30951054 caggggcgcagcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcgagtaccccaa 30950955  T
Q  381 ataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgtttt 480  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30950954 ataataaacattgagcatccccaaacaaattcagttgccgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgtttt 30950855  T
Q  481 acattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctatt 580  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30950854 acattgaaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctatt 30950755  T
Q  581 gtcaatttttatcctttg 598  Q
    ||||||||||||||||||    
T  30950754 gtcaatttttatcctttg 30950737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 31033206 - 31032929
Alignment:
Q  1 tcaattctaaattttttccatggggtgatgtcctctcggagaaggtcgaatgtgattatctctaataatgttaatggtgttcagatcgagggtgtggaag 100  Q
    |||||||||||||||| ||| ||| |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  31033206 tcaattctaaattttt-ccacgggatgatgtcctctcagagaaggttgaatgcgattatctctaataatgttaatggtgttcatatcgagggtgtggaag 31033108  T
Q  101 gggtgaggaacgcaatgtttcaacatttttcagtcacattttatagaggtaatgttgtctagatcagatgtagggaatatatcctttaaaacaatttcta 200  Q
    ||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||    
T  31033107 gggtgaggaacacaatatttcaacatttt-cagtcacattttatagaggtaatgttgtctagatcaggtgtaggggatctatcctttaaaacaatttcta 31033009  T
Q  201 tggaggatggagctaatcttattagaccttttctgttgaaagagattaaggcataggtgtgggattgtgacagttacaag 280  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31033008 tggagaatggagctaatcttattagaccttttgtgttgaaagagattaaggcataggtgtgggattgtgacagttacaag 31032929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 273 - 600
Target Start/End: Complemental strand, 29799305 - 29798978
Alignment:
Q  273 gttacaagcaggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggc 372  Q
    |||| ||||||||||| | |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||  |||||| |||||| |||||||||    
T  29799305 gttaaaagcaggggcgtagcccttcattggcaaggggtagccttggctaccc-aaaaaatatattaatctttaattggttggtataaatttatattcggc 29799207  T
Q  373 taccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataaccta 472  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||| | |||| || ||||||||||||||||||| |||||||||||| |||||||||||    
T  29799206 taccccaaataataaacattgagttactccaaataaattcagttgccaaaaactagcataaacaaattaaatggatattgagtttcttacaaataaccta 29799107  T
Q  473 tttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcatttta--cacaactttttta 570  Q
    |||| |||||||||| |||||||||||||||| |||||||||| | |||| ||| ||||||||||| ||||||||||||||||||  || ||     |||    
T  29799106 tttg-tttacattgggaaagacattattaatcaatttagtaaatgatcaaatatagataaaattggcttcttgaaatgcattttacccaaaaaaaaatta 29799008  T
Q  571 aatagctattgtcaatttttatcctttgct 600  Q
    ||||||||||||||||||||||||||||||    
T  29799007 aatagctattgtcaatttttatcctttgct 29798978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 434 - 576
Target Start/End: Original strand, 11142697 - 11142837
Alignment:
Q  434 acaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaa 533  Q
    |||||||||||||||| |||||||||||| ||||||||| ||  |||||||| |||||||||||||||||||| ||| ||||| | ||||||| ||||||    
T  11142697 acaaattaaatggacaatgagtttcttgcgaataaccta-ttcatttacatttgaaaagacattattaatcta-ttattaaacagacaattattgataaa 11142794  T
Q  534 attggtttcttgaaatgcattttacacaacttttttaaatagc 576  Q
    ||||| |||||||||  |||||||| |||| ||| ||||||||    
T  11142795 attgggttcttgaaacacattttacccaacgtttctaaatagc 11142837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 440 - 598
Target Start/End: Complemental strand, 33240946 - 33240790
Alignment:
Q  440 taaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggt 539  Q
    |||||||||||||| ||| ||| |||| ||||||| |||| ||||||||||| |||||||||||||||||| |||||  |||||||||||||||||||||    
T  33240946 taaatggacattgaatttattgaaaatgacctattagttt-acattggaaaatacattattaatctatttattaaacactcaattatggataaaattggt 33240848  T
Q  540 ttcttgaaatgcattttacacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    || || |||||||||||    || |||| | |||||| ||||||||||| |||||||||    
T  33240847 tttttaaaatgcattttgtctaaattttct-aatagccattgtcaatttctatcctttg 33240790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 434 - 555
Target Start/End: Complemental strand, 10406247 - 10406128
Alignment:
Q  434 acaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaa 533  Q
    ||||| |||||||||| |||||||||||||||||||||||||  |||||||| ||||| |||||||||||||| ||| ||||| ||||||||| ||| ||    
T  10406247 acaaactaaatggacagtgagtttcttgcaaataacctattt-atttacattcgaaaaaacattattaatcta-ttattaaacagtcaattattgatgaa 10406150  T
Q  534 attggtttcttgaaatgcattt 555  Q
    ||||| ||||||||| ||||||    
T  10406149 attgggttcttgaaacgcattt 10406128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 430 - 598
Target Start/End: Original strand, 47367882 - 47368049
Alignment:
Q  430 ataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgga 529  Q
    ||||||| || ||| || || |||||||||||||||||  ||| |||||| |||||||| |||||||||| | | ||||| ||||||  |||| ||||||    
T  47367882 ataaacatatcaaacgggcaatgagtttcttgcaaatagtctaattgttt-acattggagaagacattatcattatattttgtaaacaatcaaatatgga 47367980  T
Q  530 taaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    ||||||||  || ||||||  ||||||   |||||||||||||||| ||||||||||||||||| ||||    
T  47367981 taaaattgcctttttgaaacacattttgtccaacttttttaaatagatattgtcaatttttatcatttg 47368049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 434 - 576
Target Start/End: Original strand, 10177922 - 10178062
Alignment:
Q  434 acaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaa 533  Q
    ||||| |||||||||  |||||||||||||||||||||||||  || ||||| ||||| |||||||||||||| ||| ||||| ||||||||| ||| ||    
T  10177922 acaaactaaatggacggtgagtttcttgcaaataacctattt-attcacatttgaaaaaacattattaatcta-ttattaaacagtcaattattgatgaa 10178019  T
Q  534 attggtttcttgaaatgcattttacacaacttttttaaatagc 576  Q
    ||||  ||||||||| ||||||| | | || ||||||||||||    
T  10178020 attgagttcttgaaacgcattttgcccgacgtttttaaatagc 10178062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 467 - 588
Target Start/End: Complemental strand, 52111056 - 52110936
Alignment:
Q  467 aacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttt 566  Q
    ||||||||||||| | ||||||||||||||||||||| | |||||||||  |||||||||| |||||||||| ||||| ||| | |||||   |||||||    
T  52111056 aacctatttgttt-atattggaaaagacattattaatttgtttagtaaaaagtcaattatgaataaaattggcttcttaaaacgtattttgtccaacttt 52110958  T
Q  567 tttaaatagctattgtcaattt 588  Q
    |||||||| ||||||| |||||    
T  52110957 tttaaataactattgttaattt 52110936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 446 - 526
Target Start/End: Original strand, 28403123 - 28403202
Alignment:
Q  446 gacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattat 526  Q
    |||| |||||||| |||||||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||||    
T  28403123 gacaatgagtttcatgcaaataacctatttgttt-acattgaaaaagacattattgatctatttaataaacggtcaattat 28403202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 508
Target Start/End: Original strand, 44961470 - 44961548
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatt 508  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||  |||||||| |||||||||| |||||||||||    
T  44961470 catagacaaattaaatggacaatgagtttcttgcaaataacctattt-atttacatttgaaaagacatcattaatctatt 44961548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 313 - 432
Target Start/End: Original strand, 47367639 - 47367757
Alignment:
Q  313 ccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaaacaaattc 412  Q
    |||||||||||||||||||||| ||| | || ||| ||||||| |  ||| |||||  |||||| |||||||||||||||||||||||||||||| || |    
T  47367639 ccttggctaccccaaaaaatat-ttattgttgaattagttggtatgtatttatattttgctacctcaaataataaacattgagctaccccaaacatatcc 47367737  T
Q  413 agttgtcgaaaattaacata 432  Q
    | ||||||||||||| ||||    
T  47367738 aattgtcgaaaattagcata 47367757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 429 - 538
Target Start/End: Original strand, 19313401 - 19313508
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgg 528  Q
    |||| ||||||||||| || | ||||||||||||||||||| |||||  |||||||| |||||||||||||||||||| ||| ||||| ||||||||| |    
T  19313401 catagacaaattaaatagatagtgagtttcttgcaaataacttattt-atttacatttgaaaagacattattaatcta-ttattaaacagtcaattattg 19313498  T
Q  529 ataaaattgg 538  Q
    || |||||||    
T  19313499 atgaaattgg 19313508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 305 - 434
Target Start/End: Original strand, 23614402 - 23614530
Alignment:
Q  305 aggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaa 404  Q
    |||||||||||||||||||||||||||  ||||| |||| ||| | | ||| || ||| |||| ||||||||| |||||||||||||||||||||| |||    
T  23614402 aggggtagccttggctaccccaaaaaaagtattattcttgaattaatcggtatatatttatatccggctaccctaaataataaacattgagctacctcaa 23614501  T
Q  405 acaaattcagttgtcgaaaattaacataaa 434  Q
    | || || ||||| | ||||||| ||||||    
T  23614502 ataagtttagttg-caaaaattagcataaa 23614530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 434 - 556
Target Start/End: Original strand, 23614656 - 23614776
Alignment:
Q  434 acaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaa 533  Q
    ||||||||||  |||| ||||||||||||||||||| |||||  ||||||||  ||||| ||||||||||||| ||| ||||| | ||||||| ||| ||    
T  23614656 acaaattaaacagacaatgagtttcttgcaaataacatattt-atttacatttaaaaagtcattattaatcta-ttattaaacagacaattattgatgaa 23614753  T
Q  534 attggtttcttgaaatgcatttt 556  Q
    ||||| ||||| |||||||||||    
T  23614754 attgggttcttcaaatgcatttt 23614776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 429 - 576
Target Start/End: Complemental strand, 1600650 - 1600502
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaaga---cattattaatctatttagtaaacggtcaatta 525  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||  |||||||| |||||||   ||| ||||||||| ||| ||||    ||||||    
T  1600650 catagacaaattaaatggacaatgagtttcttgcaaataacctattt-atttacatttgaaaagaaatcatcattaatcta-ttattaaataaacaatta 1600553  T
Q  526 tggataaaattggtttcttgaaatgcattttacacaacttttttaaatagc 576  Q
    | ||| ||||||| ||| ||||| | ||||||| |||| ||| ||||||||    
T  1600552 ttgatgaaattgggttcctgaaacgtattttacccaacatttctaaatagc 1600502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 371 - 434
Target Start/End: Original strand, 29357169 - 29357232
Alignment:
Q  371 gctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    |||||||||||||||||| |||||||||||||||| || || ||||| ||||||||||||||||    
T  29357169 gctaccccaaataataaatattgagctaccccaaataagtttagttgccgaaaattaacataaa 29357232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 430 - 574
Target Start/End: Original strand, 46515613 - 46515753
Alignment:
Q  430 ataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgga 529  Q
    |||||||||||||| ||||| | ||||| ||| ||||||| | ||||||| |||||| ||||  ||||| ||||||||||| ||||| |||||| |||||    
T  46515613 ataaacaaattaaaaggacaataagttt-ttgaaaataacttgtttgttt-acattgaaaaa--cattaataatctatttattaaacagtcaatcatgga 46515708  T
Q  530 taaaattggtttcttgaaatgcattttacacaacttttttaaata 574  Q
    ||||||||  ||||| |||| | |||| | ||| |||||||||||    
T  46515709 taaaattgagttcttaaaatacgttttgcccaaattttttaaata 46515753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 405
Target Start/End: Original strand, 21972199 - 21972298
Alignment:
Q  306 ggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaaa 405  Q
    ||||||||||| |||||||||||||||| |||| |||| |||  |||| | |||| | | |||   ||||||||||||||||| ||||||||||||||||    
T  21972199 ggggtagcctttgctaccccaaaaaataaattattcttgaattggttgatataaaattacatttaactaccccaaataataaatattgagctaccccaaa 21972298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 429 - 494
Target Start/End: Original strand, 15757758 - 15757822
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagac 494  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||  |||||||| ||||||||    
T  15757758 catagacaaattaaatgtacaatgagtttcttgcaaataacctattt-atttacatttgaaaagac 15757822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 369 - 434
Target Start/End: Original strand, 19313217 - 19313281
Alignment:
Q  369 cggctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    |||||||||||||||||||| |||||||||||||||||| |||| |||| | || |||||||||||    
T  19313217 cggctaccccaaataataaatattgagctaccccaaacacattccgttg-caaatattaacataaa 19313281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 430 - 574
Target Start/End: Original strand, 21972436 - 21972576
Alignment:
Q  430 ataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgga 529  Q
    |||||||||||||| ||||| | ||||| ||| ||||||| | |||| || |||||| ||||  ||||| ||||||||||| ||||| ||||||||||||    
T  21972436 ataaacaaattaaaaggacaataagttt-ttgaaaataacttgtttgctt-acattgaaaaa--cattaataatctatttattaaacagtcaattatgga 21972531  T
Q  530 taaaattggtttcttgaaatgcattttacacaacttttttaaata 574  Q
    |||||||   ||||| |||| | |||| | ||| |||||||||||    
T  21972532 taaaatttacttcttaaaatacgttttgcccaaattttttaaata 21972576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 434
Target Start/End: Complemental strand, 10989559 - 10989447
Alignment:
Q  322 ccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaaacaaattcagttgtcga 421  Q
    ||||||||||  ||||| |||| |||| |||||| |   || |||||  |||||||||||||| ||| ||| |||||||||||||||||| | ||||  |    
T  10989559 ccccaaaaaaagtattattcttgaatatgttggtatgtttttatatttagctaccccaaataaaaaatatttagctaccccaaacaaatttatttgttaa 10989460  T
Q  422 aaattaacataaa 434  Q
    |||||||||||||    
T  10989459 aaattaacataaa 10989447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 405
Target Start/End: Original strand, 11142442 - 11142541
Alignment:
Q  305 aggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaa 404  Q
    ||||||||||||||||||||||||||| ||||||  ||| ||   || ||| |  | | ||||||||||||| |||||||||||||||||||||| ||||    
T  11142442 aggggtagccttggctaccccaaaaaa-atattatacttaaagtggtcggtatgtacttatattcggctacctcaaataataaacattgagctactccaa 11142540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 478 - 592
Target Start/End: Complemental strand, 5184737 - 5184626
Alignment:
Q  478 tttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagct 577  Q
    ||||||||| ||||||||||| ||||||||||| ||| | |||||||||| |||||||||  | ||| |||||| |||  | |||||||||||||||  |    
T  5184737 tttacattg-aaaagacattaataatctatttattaa-cagtcaattatgcataaaattgactccttaaaatgcgtttgcc-caacttttttaaatattt 5184641  T
Q  578 attgtcaatttttat 592  Q
     ||||||||||||||    
T  5184640 gttgtcaatttttat 5184626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 429 - 494
Target Start/End: Original strand, 10620145 - 10620209
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagac 494  Q
    |||| |||||||||||| ||| ||||||||||| |||||||||||||  |||||||| ||||||||    
T  10620145 catagacaaattaaatgtacaatgagtttcttgaaaataacctattt-atttacatttgaaaagac 10620209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 434
Target Start/End: Complemental strand, 5184954 - 5184891
Alignment:
Q  371 gctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    |||||||||||||||||| |||||| ||||| ||| || ||| |||||| ||||||| ||||||    
T  5184954 gctaccccaaataataaatattgagttaccctaaataagttcggttgtctaaaattagcataaa 5184891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 434
Target Start/End: Original strand, 10177734 - 10177796
Alignment:
Q  371 gctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    ||||| |||||||||||| |||||||||||| ||| |||||| |||| | ||||||||||||||    
T  10177734 gctactccaaataataaatattgagctaccctaaataaattccgttg-caaaaattaacataaa 10177796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 404
Target Start/End: Original strand, 44960909 - 44960944
Alignment:
Q  369 cggctaccccaaataataaacattgagctaccccaa 404  Q
    |||||||||||||||||||| |||||||||||||||    
T  44960909 cggctaccccaaataataaagattgagctaccccaa 44960944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 592
Target Start/End: Complemental strand, 10989281 - 10989152
Alignment:
Q  462 caaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacaca 561  Q
    |||||||| ||||||||| |||||| |||||||||||||| | |||||||||  |  |||||| || | ||||||   || || |||||  ||   | ||    
T  10989281 caaataacttatttgttt-acattgaaaaagacattattagtatatttagtatgcaatcaattctgaagaaaattaactttttaaaatgtgttgagccca 10989183  T
Q  562 acttttttaaatagctattgtcaatttttat 592  Q
    |||||||||||||| ||||||||||||||||    
T  10989182 acttttttaaatagttattgtcaatttttat 10989152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 537
Target Start/End: Complemental strand, 27696583 - 27696506
Alignment:
Q  456 ttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattg 537  Q
    ||||| |||||||||||||   ||||||||| ||||||||||| |||||| |||| |||||  |||||||||||||||||||    
T  27696583 ttcttacaaataacctattg--tttacattg-aaaagacattagtaatct-tttattaaacaatcaattatggataaaattg 27696506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 537
Target Start/End: Original strand, 24134376 - 24134455
Alignment:
Q  456 ttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattg 537  Q
    |||||||||||||| ||||||||| |||||  |||| |||||| |||||| ||||  |||  ||||||||||||||||||||    
T  24134376 ttcttgcaaataacatatttgttt-acatttaaaaa-acattaataatctttttatcaaatagtcaattatggataaaattg 24134455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 434
Target Start/End: Original strand, 46515441 - 46515505
Alignment:
Q  371 gctaccccaaataataaacattgagctaccccaaacaaattcag-ttgtcgaaaattaacataaa 434  Q
    ||||||| ||| |||||| |||||||||||||||| |||||  | ||||||||||||| ||||||    
T  46515441 gctaccctaaaaaataaatattgagctaccccaaataaatttggtttgtcgaaaattagcataaa 46515505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 286; Significance: 1e-160; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 281 - 598
Target Start/End: Original strand, 16546206 - 16546523
Alignment:
Q  281 caggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaa 380  Q
    |||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  16546206 caggggcgcaactcttcattgacaagggttagccttggctaccccaaaaaatatattaaactttaataagttggtgtaaatttatattcggctaccccaa 16546305  T
Q  381 ataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgtttt 480  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16546306 ataataaacattgagctaccctaaacaaattcagttgccgaaaattaacataaacaaattaaatggacattgagtttcttccaaataacctatttgtttt 16546405  T
Q  481 acattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctatt 580  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16546406 acattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctatt 16546505  T
Q  581 gtcaatttttatcctttg 598  Q
    ||||||||||||||||||    
T  16546506 gtcaatttttatcctttg 16546523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 292 - 598
Target Start/End: Complemental strand, 45656180 - 45655875
Alignment:
Q  292 cccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacat 391  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||  |||||| |||||| || |||||||||||||||||||||| ||    
T  45656180 cccttcattggcaaggggtagccttggctaccccaaaaaatatattaatttttaattggttggtataaatttattttcggctaccccaaataataaatat 45656081  T
Q  392 tgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaa 491  Q
    ||||||||||||||||||||||||||||||||  || ||||||||| | ||||||||||||| |||||||||||||||||||||| ||||||||| ||||    
T  45656080 tgagctaccccaaacaaattcagttgtcgaaagctagcataaacaattgaaatggacattgaatttcttgcaaataacctatttg-tttacattgaaaaa 45655982  T
Q  492 gacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaattttta 591  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||||||||||||||||| |||| |||    
T  45655981 gacattattaatctatttagtaaacggtcaattatgaataaaattggctttttgaaatgcattttacccaacttttttaaatagctattgttaattctta 45655882  T
Q  592 tcctttg 598  Q
    |||||||    
T  45655881 tcctttg 45655875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 383 - 569
Target Start/End: Complemental strand, 39070338 - 39070152
Alignment:
Q  383 aataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttac 482  Q
    ||||||||||||| ||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39070338 aataaacattgagataccctaaacaaattcagttgccgaaaattaacataaataaattaaatggacattgagtttcttgcaaataacctatttgttttac 39070239  T
Q  483 attggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaactttttt 569  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39070238 attggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaactttttt 39070152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 370 - 590
Target Start/End: Original strand, 37614532 - 37614754
Alignment:
Q  370 ggctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataac 469  Q
    ||||||||||||||||||||||||||| ||||||| |||||| | | ||||||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  37614532 ggctaccccaaataataaacattgagccaccccaagcaaatttaatcgtcgaaaattagcataaacaaattaaatagacattgaatttcttgcaaataac 37614631  T
Q  470 ctatttgttt--tacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaactttt 567  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||  ||||||| ||||| |||| ||||||||||||||||||| ||||||||    
T  37614632 ctatttgtttactacattggaaaagacattattaatctatttagtaaacggctaattatgaataaatttggcttcttgaaatgcattttacccaactttt 37614731  T
Q  568 ttaaatagctattgtcaattttt 590  Q
    || |||  ||||||||| |||||    
T  37614732 tttaatttctattgtcatttttt 37614754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 429 - 598
Target Start/End: Complemental strand, 42799253 - 42799084
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacgg-tcaattatg 527  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||  | |||||||||    
T  42799253 cataaacaaattaaatggacattgagtttcttgcaaataaactatttgttt-acattggaaaagacattattaatctatttagtaaaatgatcaattatg 42799155  T
Q  528 gataaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  42799154 gataaaattggcttcttgaaatgcattttatccaacttttttaaatagctattgtcaatttttatcatttg 42799084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 282 - 397
Target Start/End: Complemental strand, 39070459 - 39070355
Alignment:
Q  282 aggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaa 381  Q
    ||||||||| |||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  39070459 aggggcgcagcccttcattgacaaggggtag-----------ccaaaaaatatattaatctttaataagttggtgtaaatttatattcggctacctcaaa 39070371  T
Q  382 taataaacattgagct 397  Q
    ||||||||||||||||    
T  39070370 taataaacattgagct 39070355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 442 - 574
Target Start/End: Original strand, 4435287 - 4435417
Alignment:
Q  442 aatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggttt 541  Q
    |||||||| ||||||||||| ||||||||||||| ||| ||||| |||||||||||||||||||| ||| ||||| | ||||||||||| ||||||  ||    
T  4435287 aatggacaatgagtttcttgtaaataacctatttattt-acatttgaaaagacattattaatcta-ttattaaacagacaattatggatgaaattgagtt 4435384  T
Q  542 cttgaaatgcattttacacaacttttttaaata 574  Q
    ||||||||||||||| | |||| ||| ||||||    
T  4435385 cttgaaatgcattttgcccaacgtttctaaata 4435417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 278 - 424
Target Start/End: Original strand, 26180406 - 26180551
Alignment:
Q  278 aagcaggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccc 377  Q
    ||||||||||| | ||||||||  |||||| ||||||||||||| |||||||||||||||||| || ||| ||||||| |  ||| ||||   |||||      
T  26180406 aagcaggggcgtagcccttcatatacaaggagtagccttggcta-cccaaaaaatatattaattttgaattagttggtatgtatttatatctagctactt 26180504  T
Q  378 caaataataaacattgagctaccccaaacaaattcagttgtcgaaaa 424  Q
    ||||||||||| ||||||||||| ||||||| || ||||||| ||||    
T  26180505 caaataataaatattgagctacctcaaacaagtttagttgtccaaaa 26180551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 280 - 434
Target Start/End: Complemental strand, 8230531 - 8230376
Alignment:
Q  280 gcaggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaata-tattaatctttaataagttggtgtaaattaatattcggctacccc 378  Q
    |||||||||  ||||||||||  || | ||||||| |||||||||||||||| | ||||| |||| |||| |||||| |   || |||||  ||||||||    
T  8230531 gcaggggcggttcccttcattagcatgaggtagccatggctaccccaaaaaaaagtattattcttgaatatgttggtatgtttttatatttagctacccc 8230432  T
Q  379 aaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    |||||| ||| ||| |||||||||||||||||| | ||||  ||||||||||||||    
T  8230431 aaataaaaaatatttagctaccccaaacaaatttatttgttaaaaattaacataaa 8230376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 30760544 - 30760458
Alignment:
Q  18 ccatggggtgatgtcctctcggagaaggtcgaatgtgattatctctaataatgttaatggtgttcagatcgagggtgtggaaggggt 104  Q
    |||||| |||||||| | |||||||||||| ||||| ||||| |||| |||||| |||||||||||| | |||||||||||||||||    
T  30760544 ccatggagtgatgtcttttcggagaaggtcaaatgtcattatttctattaatgtaaatggtgttcaggtagagggtgtggaaggggt 30760458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 21746221 - 21746085
Alignment:
Q  453 agtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgca 552  Q
    |||||| ||||| |||| ||||| ||| |||||| ||| |||||||||| ||||||||||| ||  ||||||| | ||||||||| ||| ||||||||      
T  21746221 agtttcatgcaagtaacttatttattt-acattgaaaatgacattattagtctatttagtatacaatcaattaagaataaaattgattttttgaaatg-- 21746125  T
Q  553 ttttacacaacttttttaaatagctattgtcaatttttat 592  Q
    || |   |||||||||||||||||| ||||||||||||||    
T  21746124 ttgtgtccaacttttttaaatagcttttgtcaatttttat 21746085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 13535092 - 13534994
Alignment:
Q  12 ttttttccatggggtgatgtcctctcggagaagg-tcgaatgtgattatctctaataatgttaatggtgttcagatcgagggtgtggaaggggtgagga 109  Q
    |||||||||||||||| |||| ||| ||||| || || | ||||||||| |||| ||||||||| |||||||||||  ||||||||||||||| |||||    
T  13535092 ttttttccatggggtggtgtcttctaggagacgggtcaactgtgattatttctattaatgttaaaggtgttcagattaagggtgtggaaggggcgagga 13534994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 478 - 591
Target Start/End: Complemental strand, 14802768 - 14802654
Alignment:
Q  478 tttacattggaaaagacattattaatctattta-gtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagc 576  Q
    |||||||| ||||| |||||||||||||||||  ||||||  ||||||||  |||||||||| ||||||||| || ||||   |||||||| |||||||     
T  14802768 tttacattagaaaaaacattattaatctatttttgtaaacaatcaattataaataaaattggcttcttgaaacgcgttttgtccaacttttctaaatagt 14802669  T
Q  577 tattgtcaattttta 591  Q
    | |||||||||||||    
T  14802668 tgttgtcaattttta 14802654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 281 - 434
Target Start/End: Complemental strand, 35525066 - 35524913
Alignment:
Q  281 caggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaa 380  Q
    ||||||||  ||||||||||  || | ||||||| ||||||||||||||||  ||||  |||| |||| |||||| |   || |||||  ||||||||||    
T  35525066 caggggcggttcccttcattagcatgaggtagccatggctaccccaaaaaaattatttttcttgaatatgttggtatgtttttatatttagctaccccaa 35524967  T
Q  381 ataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    |||| ||| ||| |||||||||||| ||||| | ||||  ||||||||||||||    
T  35524966 ataaaaaatatttagctaccccaaataaatttatttgttaaaaattaacataaa 35524913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 30758384 - 30758317
Alignment:
Q  38 ggagaaggtcgaatgtgattatctctaataatgttaatggtgttcagatcgagggtgtggaaggggtg 105  Q
    |||||||||| ||||| ||||| |||| |||||| |||||||||||| | ||||||||||||||||||    
T  30758384 ggagaaggtcaaatgtcattatttctattaatgtaaatggtgttcaggtagagggtgtggaaggggtg 30758317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 598
Target Start/End: Complemental strand, 39070019 - 39069978
Alignment:
Q  557 acacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  39070019 acacaacttttttaaatagctattgtcaatttttatactttg 39069978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 416
Target Start/End: Complemental strand, 42799420 - 42799360
Alignment:
Q  357 taaattaatattcggctacccc-aaataataaacattgagctaccccaaacaaattcagtt 416  Q
    |||||| |||||| |||||||| |||||||||||||| |||||| ||||||||||||||||    
T  42799420 taaatttatattcagctacccccaaataataaacattcagctacaccaaacaaattcagtt 42799360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 35524747 - 35524694
Alignment:
Q  459 ttgcaaataacctatttgttttacattggaaaagacattattaatctatttagta 513  Q
    ||||||||||| ||||||||| |||||| |||||||||||||| |||||||||||    
T  35524747 ttgcaaataacttatttgttt-acattgaaaaagacattattagtctatttagta 35524694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 4435024 - 4435120
Alignment:
Q  305 aggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccc 401  Q
    ||||||||||  |||||||| ||||||||||||| |||| |||  || ||| |  ||| |||| ||| ||||  |||||||||||||||| ||||||    
T  4435024 aggggtagccaaggctacccaaaaaaatatattattcttgaattggtcggtatgtatttatatccggttaccttaaataataaacattgaactaccc 4435120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 560 - 592
Target Start/End: Complemental strand, 35524647 - 35524615
Alignment:
Q  560 caacttttttaaatagctattgtcaatttttat 592  Q
    |||||||||||||||| ||||||||||||||||    
T  35524647 caacttttttaaatagttattgtcaatttttat 35524615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 492 - 556
Target Start/End: Original strand, 38881794 - 38881857
Alignment:
Q  492 gacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcatttt 556  Q
    ||||||||||||||||| | ||||| | ||||||| ||| ||||||| ||||||||||| |||||    
T  38881794 gacattattaatctatt-attaaacagacaattatagatgaaattgggttcttgaaatgtatttt 38881857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 282; Significance: 1e-158; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 281 - 598
Target Start/End: Original strand, 12491418 - 12491735
Alignment:
Q  281 caggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaa 380  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12491418 caggggcgcaacccttcattgacaaggggtagccttggctactccaaaaaatatattaatctttaataagttggtgcaaattaatattcggctaccccaa 12491517  T
Q  381 ataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgtttt 480  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12491518 ataacaaacattgagctgccccaaacaaattcagttgccgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgtttt 12491617  T
Q  481 acattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctatt 580  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12491618 acattggaaaaaacattattaatctatttagtaaacggtcaattatggatacaattggtttcttgaaatgcattttacacaacttttttaaatagctatt 12491717  T
Q  581 gtcaatttttatcctttg 598  Q
    ||||||||| ||||||||    
T  12491718 gtcaattttaatcctttg 12491735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 429 - 598
Target Start/End: Original strand, 18881858 - 18882025
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgg 528  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||  ||||||||||    
T  18881858 cataaacatattaaatgggcaatgagtttcttgcaaataacctatttgttt-acattggaaaaaacattattaatctattttgtaaacaatcaattatgg 18881956  T
Q  529 ataaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    |||||||||  |||||||||| ||||||   ||| |||| ||||||| ||||||||||||||||| ||||    
T  18881957 ataaaattgccttcttgaaat-cattttgtccaaattttctaaatagttattgtcaatttttatcatttg 18882025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 429 - 598
Target Start/End: Complemental strand, 38172870 - 38172699
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctat----ttagtaaacggtcaatt 524  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||| |||| |||||||| || |||||||||||||||    |||||||||  ||||||    
T  38172870 cataaacaaattaaatgaacaatgagtttattgcaaataacctattagttt-acattggagaatacattattaatctatatatttagtaaacactcaatt 38172772  T
Q  525 atggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    ||||||||||||||||| ||||||||||| ||   ||| |||| | ||||||||||||||||||||||||||||    
T  38172771 atggataaaattggttttttgaaatgcatcttgtccaaattttct-aatagctattgtcaatttttatcctttg 38172699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 434 - 576
Target Start/End: Complemental strand, 38699823 - 38699683
Alignment:
Q  434 acaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaa 533  Q
    |||||||||||||| | |||||||||||||||||||||||||  |||||||| |||||||||||||||||||| ||| ||||| ||| ||||| ||| ||    
T  38699823 acaaattaaatggagagtgagtttcttgcaaataacctattt-atttacatttgaaaagacattattaatcta-ttattaaacagtctattattgatgaa 38699726  T
Q  534 attggtttcttgaaatgcattttacacaacttttttaaatagc 576  Q
    ||||| ||||||||| ||||||| | |||| ||| ||||||||    
T  38699725 attgggttcttgaaacgcattttgcccaacgtttctaaatagc 38699683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 281 - 434
Target Start/End: Complemental strand, 6115284 - 6115131
Alignment:
Q  281 caggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaa 380  Q
    |||||||| |||| ||||||   |||||||||||||||||||||||||||| |||||| ||||  || ||||||| |  ||  |||| | ||||||  ||    
T  6115284 caggggcgtatcctttcattaggaaggggtagccttggctaccccaaaaaaaatattattcttgtattagttggtatgtatctatatccagctaccataa 6115185  T
Q  381 ataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    |||||||||||||| ||||||||||||| |||||||| | |||| |||||||||    
T  6115184 ataataaacattgaactaccccaaacaagttcagttgccaaaaaataacataaa 6115131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 281 - 434
Target Start/End: Original strand, 32415644 - 32415797
Alignment:
Q  281 caggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaa 380  Q
    |||||||| | |||||||  ||||||||||| | |||||||||| ||||||||||||| |||| |||  |||||| |||| | ||||  ||| |||  ||    
T  32415644 caggggcgtagcccttcaacgacaaggggtaactttggctacccaaaaaaatatattattcttcaattggttggtataaacttatatctggcaaccttaa 32415743  T
Q  381 ataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    ||||||||||||||| ||||||||| ||||| ||||||| |||||||| |||||    
T  32415744 ataataaacattgagttaccccaaataaattaagttgtcaaaaattaatataaa 32415797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 440 - 555
Target Start/End: Original strand, 43115234 - 43115347
Alignment:
Q  440 taaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggt 539  Q
    |||||||||| ||||||||||||||||||| |||||  |||||||| ||||| |||||||||||||| ||| ||||| ||||||||| ||| |||||||     
T  43115234 taaatggacagtgagtttcttgcaaataacatattt-atttacatttgaaaaaacattattaatcta-ttattaaacagtcaattattgatgaaattggg 43115331  T
Q  540 ttcttgaaatgcattt 555  Q
    ||||||||| ||||||    
T  43115332 ttcttgaaacgcattt 43115347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 436 - 573
Target Start/End: Complemental strand, 13541491 - 13541357
Alignment:
Q  436 aaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaat 535  Q
    |||||||||||||| |||||||||||||||||||||||||  |||||||| ||||||| |||||||||||||||  ||||| | ||||||  ||| ||||    
T  13541491 aaattaaatggacaatgagtttcttgcaaataacctattt-atttacatttgaaaagatattattaatctattt--taaacagacaattagtgatgaaat 13541395  T
Q  536 tggtttcttgaaatgcattttacacaacttttttaaat 573  Q
    ||  |||| |||| ||||||| | |||| |||||||||    
T  13541394 tgagttctcgaaacgcattttgcccaacgtttttaaat 13541357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 436 - 573
Target Start/End: Original strand, 13682982 - 13683116
Alignment:
Q  436 aaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaat 535  Q
    |||||||||||||| |||||||||||||||||||||||||  |||||||| ||||||| |||||||||||||||  ||||| | ||||||  ||| ||||    
T  13682982 aaattaaatggacaatgagtttcttgcaaataacctattt-atttacatttgaaaagatattattaatctattt--taaacagacaattagtgatgaaat 13683078  T
Q  536 tggtttcttgaaatgcattttacacaacttttttaaat 573  Q
    ||  |||| |||| ||||||| | |||| |||||||||    
T  13683079 tgagttctcgaaacgcattttgcccaacgtttttaaat 13683116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 429 - 598
Target Start/End: Original strand, 41570441 - 41570609
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgg 528  Q
    |||||||| ||||||||   | ||||||||||||||||||||||||||||| || ||  |||| |||  |||||||||||| ||||||  ||||||||||    
T  41570441 cataaacatattaaatgagtaatgagtttcttgcaaataacctatttgttt-accttaaaaaa-acaacattaatctattttgtaaacaatcaattatgg 41570538  T
Q  529 at-aaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    || |||||||| ||||||||| ||||||    |||||||| ||||||||||| ||||||| ||||| ||||    
T  41570539 ataaaaattggcttcttgaaacgcatttagtccaacttttctaaatagctatggtcaattcttatcatttg 41570609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 304 - 426
Target Start/End: Original strand, 41570189 - 41570311
Alignment:
Q  304 aaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctacccca 403  Q
    |||||||||||||||||||||||||||  |||||  |||| | |  || ||| |  ||| |||||| |||||||||||||||||| ||||||||||||||    
T  41570189 aaggggtagccttggctaccccaaaaacaatatttttcttgagttggtaggtatgtatttatattcagctaccccaaataataaatattgagctacccca 41570288  T
Q  404 aacaaattcagttgtcgaaaatt 426  Q
    || || |||||||| ||||||||    
T  41570289 aaaaagttcagttgccgaaaatt 41570311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 480 - 592
Target Start/End: Complemental strand, 6114984 - 6114873
Alignment:
Q  480 tacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctat 579  Q
    |||||||||||| | |||||||||||||||  ||||  |||  |||||||||||||||| |||||||||  |||||||  || |||||||||||||||||    
T  6114984 tacattggaaaatatattattaatctattttataaatagtcctttatggataaaattgg-ttcttgaaacacattttatccagcttttttaaatagctat 6114886  T
Q  580 tgtcaatttttat 592  Q
      |||||||||||    
T  6114885 catcaatttttat 6114873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 434
Target Start/End: Complemental strand, 38173039 - 38172982
Alignment:
Q  377 ccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    |||||||||||||||||||||||||||||||| |||| |||| ||||||||| |||||    
T  38173039 ccaaataataaacattgagctaccccaaacaagttcaattgttgaaaattaagataaa 38172982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 429 - 534
Target Start/End: Original strand, 40118144 - 40118247
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgg 528  Q
    ||||||||||||||||||||| ||| ||| |||||||||| ||||| | |||||||| ||||| | ||||||||||||  ||||||||  ||||||||||    
T  40118144 cataaacaaattaaatggacaatgaatttattgcaaataatctattag-tttacatt-gaaaatatattattaatctacctagtaaacactcaattatgg 40118241  T
Q  529 ataaaa 534  Q
    | ||||    
T  40118242 aaaaaa 40118247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 350 - 434
Target Start/End: Complemental strand, 1233840 - 1233756
Alignment:
Q  350 gttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    |||||| || ||| |||||  |||||||||||||||||| ||||||||||||||| ||| ||  |||| ||||||||||||||||    
T  1233840 gttggtatatatttatatttagctaccccaaataataaatattgagctaccccaagcaagtttggttgccgaaaattaacataaa 1233756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 371 - 425
Target Start/End: Complemental strand, 5808907 - 5808853
Alignment:
Q  371 gctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaat 425  Q
    |||||||||||||||||| |||||||||||||||| |||||  ||||||||||||    
T  5808907 gctaccccaaataataaatattgagctaccccaaataaatttggttgtcgaaaat 5808853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 429 - 494
Target Start/End: Complemental strand, 4072291 - 4072227
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagac 494  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||  |||||||| ||||||||    
T  4072291 catagacaaattaaatgtacaatgagtttcttgcaaataacctattt-atttacatttgaaaagac 4072227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 429 - 494
Target Start/End: Complemental strand, 21441657 - 21441593
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagac 494  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||  |||||||| ||||||||    
T  21441657 catagacaaattaaatgtacaatgagtttcttgcaaataacctattt-atttacatttgaaaagac 21441593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 434
Target Start/End: Complemental strand, 13641196 - 13641112
Alignment:
Q  350 gttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    |||||| || ||| |||||  |||||| ||||||||||| ||||||||||||||| ||| ||  |||| ||||||||||||||||    
T  13641196 gttggtatatatttatatttagctacctcaaataataaatattgagctaccccaagcaagtttggttgccgaaaattaacataaa 13641112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 434
Target Start/End: Complemental strand, 13741608 - 13741524
Alignment:
Q  350 gttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    |||||| || ||| |||||  |||||| ||||||||||| ||||||||||||||| ||| ||  |||| ||||||||||||||||    
T  13741608 gttggtatatatttatatttagctacctcaaataataaatattgagctaccccaagcaagtttggttgccgaaaattaacataaa 13741524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 475
Target Start/End: Original strand, 33613707 - 33613745
Alignment:
Q  437 aattaaatggacattgagtttcttgcaaataacctattt 475  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  33613707 aattaaatggacaatgagtttcttgcaaataacctattt 33613745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 429 - 494
Target Start/End: Complemental strand, 41323245 - 41323181
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagac 494  Q
    |||| |||||||||||| ||| |||||||||||||||||| ||||||  |||||||| ||||||||    
T  41323245 catagacaaattaaatgtacaatgagtttcttgcaaataaactattt-atttacatttgaaaagac 41323181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 537
Target Start/End: Complemental strand, 1233641 - 1233564
Alignment:
Q  456 ttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattg 537  Q
    ||||| |||||||||||||   ||||||||| ||||||||||| |||||| |||| |||||  |||||||||||||||||||    
T  1233641 ttcttacaaataacctattg--tttacattg-aaaagacattagtaatct-tttattaaacaatcaattatggataaaattg 1233564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 537
Target Start/End: Complemental strand, 13640997 - 13640920
Alignment:
Q  456 ttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattg 537  Q
    ||||| |||||||||||||   ||||||||| ||||||||||| |||||| |||| |||||  |||||||||||||||||||    
T  13640997 ttcttacaaataacctattg--tttacattg-aaaagacattagtaatct-tttattaaacaatcaattatggataaaattg 13640920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 537
Target Start/End: Complemental strand, 13741409 - 13741332
Alignment:
Q  456 ttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattg 537  Q
    ||||| |||||||||||||   ||||||||| ||||||||||| |||||| |||| |||||  |||||||||||||||||||    
T  13741409 ttcttacaaataacctattg--tttacattg-aaaagacattagtaatct-tttattaaacaatcaattatggataaaattg 13741332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 418
Target Start/End: Original strand, 43115046 - 43115087
Alignment:
Q  377 ccaaataataaacattgagctaccccaaacaaattcagttgt 418  Q
    |||||||||||| ||||||||||| ||||||||||| |||||    
T  43115046 ccaaataataaatattgagctacctcaaacaaattccgttgt 43115087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 238; Significance: 1e-131; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 281 - 598
Target Start/End: Original strand, 22785880 - 22786196
Alignment:
Q  281 caggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaa 380  Q
    |||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||| || ||||||||||||||    
T  22785880 caggggcgtagcccttcattggcaaggggtagccttggctaccccaaaaaatatattaatctttaattggttggtataaatttattttcggctaccccaa 22785979  T
Q  381 ataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgtttt 480  Q
    |||||||||||||||||||||||||||||||||||||||||||  || ||||||||| ||||||||||||||| |||||||||||||||||||||| |||    
T  22785980 ataataaacattgagctaccccaaacaaattcagttgtcgaaagctagcataaacaatttaaatggacattgaatttcttgcaaataacctatttg-ttt 22786078  T
Q  481 acattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctatt 580  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  22786079 acattggaaaagacattattaatctatttagtaaacggtcgattatggataaaattggcttcttgaaatgcattttacccaacttttttaaatagctatt 22786178  T
Q  581 gtcaatttttatcctttg 598  Q
    || |||| ||||||||||    
T  22786179 gttaattcttatcctttg 22786196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 292 - 598
Target Start/End: Complemental strand, 6017044 - 6016739
Alignment:
Q  292 cccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacat 391  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||| || || ||||||||||||||||||||||    
T  6017044 cccttcattggcaaggggtagccttggctaccccaaaaattatattaatctttaattggttggtataaatttatttttggctaccccaaataataaacat 6016945  T
Q  392 tgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaa 491  Q
    ||||||||||||||||||||||||||||||||  || ||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  6016944 tgagctaccccaaacaaattcagttgtcgaaagctagcataaacaatttaaatgtacattgagtttcttgcaaataacctatttg-tttacattgaaaaa 6016846  T
Q  492 gacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaattttta 591  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6016845 gacattattaatctatttagtaaacggtcaattatggataaaattggcttattgaaatgcattttacccaacttttttaaatagctattgtcaattttta 6016746  T
Q  592 tcctttg 598  Q
    |||||||    
T  6016745 tcctttg 6016739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 292 - 598
Target Start/End: Original strand, 2407018 - 2407324
Alignment:
Q  292 cccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacat 391  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||  |||||| |||||| || ||| |||||||||||||||||||||    
T  2407018 cccttcattggcaaggggtagccttggctacctcaaaaaatatattaatctttaattggttggtataaatttattttcagctaccccaaataataaacat 2407117  T
Q  392 tgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattgg-aaa 490  Q
    |||||||||||||  |||||||||||||||||  || ||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||| |||    
T  2407118 tgagctaccccaactaaattcagttgtcgaaagctagcataaacaatttaaatggacattgaatttcttgcaaataacctatttg-tttacattggaaaa 2407216  T
Q  491 agacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaattttt 590  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||| |||| ||    
T  2407217 agacattattaatctatttagtaaacggtcaattattgataaaattgacttcttgaaatgcattttactcaacttttttaaatagctattgttaattctt 2407316  T
Q  591 atcctttg 598  Q
    ||||||||    
T  2407317 atcctttg 2407324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 429 - 598
Target Start/End: Original strand, 21790774 - 21790943
Alignment:
Q  429 cataaacaaattaaatggacattgagtttctt--gcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattat 526  Q
    ||||||||||| ||||||||| ||||||| ||  ||||||||||||||| ||| || ||||||||||||||||||||||| |||||||||  ||||||||    
T  21790774 cataaacaaataaaatggacaatgagttttttttgcaaataacctatttattt-ac-ttggaaaagacattattaatctagttagtaaacaatcaattat 21790871  T
Q  527 ggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    ||| |||||||  ||||| ||||||||||||| |||||||| |||||| |||  || |||||||||||||||    
T  21790872 ggacaaaattgacttcttaaaatgcattttacccaacttttctaaatacctacggtaaatttttatcctttg 21790943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 429 - 598
Target Start/End: Complemental strand, 54166031 - 54165869
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgg 528  Q
    |||||| |||||||||||||| ||||||| |||||||||||||||| | ||||||||| |||| ||||||||||||||     ||| || ||||||||||    
T  54166031 cataaataaattaaatggacaatgagtttattgcaaataacctattag-tttacattgaaaaatacattattaatcta-----taatcgctcaattatgg 54165938  T
Q  529 ataaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    | ||||||| ||||||||||| ||||||   |||||||| | |||| |||||||||||||||||||||||    
T  54165937 aaaaaattgatttcttgaaatacattttgtccaacttttct-aataactattgtcaatttttatcctttg 54165869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 429 - 598
Target Start/End: Original strand, 52628294 - 52628465
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatc----tatttagtaaacggtcaatt 524  Q
    |||||| |||||||||| ||| ||||||| |||||||||||||||| | |||||||||||||| | ||||||||||    ||||||||||||  ||||||    
T  52628294 cataaataaattaaatgaacaatgagtttattgcaaataacctattag-tttacattggaaaatatattattaatctatatatttagtaaacactcaatt 52628392  T
Q  525 atggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    ||  |||||| |||||||||||||||||| ||   ||| |||| | ||||||||||||||||||||||||||||    
T  52628393 atttataaaactggtttcttgaaatgcatcttgtccaaattttct-aatagctattgtcaatttttatcctttg 52628465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 305 - 434
Target Start/End: Original strand, 48861760 - 48861888
Alignment:
Q  305 aggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaa 404  Q
    |||||||||||||||||||||||||||  ||||| |||| ||| | | ||| || ||| ||||||||||||||||||||||||||||| |||||||||||    
T  48861760 aggggtagccttggctaccccaaaaaaagtattattcttgaattaatcggtatatatttatattcggctaccccaaataataaacattaagctaccccaa 48861859  T
Q  405 acaaattcagttgtcgaaaattaacataaa 434  Q
    | || || ||||| | ||||||| ||||||    
T  48861860 ataagtttagttg-caaaaattagcataaa 48861888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 576
Target Start/End: Complemental strand, 8745778 - 8745633
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgg 528  Q
    |||| |||||||||||||||| |||||||||| | ||||||||||||  |||||||| |||||||||||||||||||| ||| ||||  | ||||||| |    
T  8745778 catagacaaattaaatggacaatgagtttcttacgaataacctattt-atttacatttgaaaagacattattaatcta-ttattaaataggcaattattg 8745681  T
Q  529 ataaaattggtttcttgaaatgcattttacacaacttttttaaatagc 576  Q
    || ||||||| |||| ||||  |||||| | |||| ||| ||||||||    
T  8745680 atgaaattgggttctcgaaacacattttgcccaacgtttctaaatagc 8745633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 488 - 583
Target Start/End: Complemental strand, 17815992 - 17815897
Alignment:
Q  488 aaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtc 583  Q
    |||| ||||||||||||||||| ||||||  |||| ||||||||||||||  ||||| ||| ||||||| | ||||||||||||||||||||||||    
T  17815992 aaaaaacattattaatctattttgtaaacaatcaactatggataaaattgacttctttaaacgcattttgcccaacttttttaaatagctattgtc 17815897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 306 - 434
Target Start/End: Original strand, 21790525 - 21790652
Alignment:
Q  306 ggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaaa 405  Q
    |||||||||| || || |||||||||||||||| |||| ||  ||||| | |||||| ||||||  |||||| |||||||||| ||||||| |||  |||    
T  21790525 ggggtagcct-ggttatcccaaaaaatatattattcttcaaatagttgttataaatttatattcaactaccctaaataataaatattgagccaccataaa 21790623  T
Q  406 caaattcagttgtcgaaaattaacataaa 434  Q
     ||||||||||| ||||||||||||||||    
T  21790624 taaattcagttgccgaaaattaacataaa 21790652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 429 - 508
Target Start/End: Original strand, 48841184 - 48841262
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatt 508  Q
    |||| |||||||||||||| | || ||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  48841184 catagacaaattaaatggataatgggtttcttgcaaataacctattt-atttacatttgaaaagacattattaatctatt 48841262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 480 - 598
Target Start/End: Original strand, 11950592 - 11950710
Alignment:
Q  480 tacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaacttttttaaatagctat 579  Q
    ||||| ||||||||||| |||||||||||| |||||  |||| ||||| || ||||||| ||||||||    |||||   |||||||| |||||||||||    
T  11950592 tacatcggaaaagacatcattaatctattttgtaaatagtcatttatgaattaaattggcttcttgaagcagattttgtccaacttttctaaatagctat 11950691  T
Q  580 tgtcaatttttatcctttg 598  Q
    |||||||||||||| ||||    
T  11950692 tgtcaatttttatcatttg 11950710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 434 - 556
Target Start/End: Original strand, 48862014 - 48862134
Alignment:
Q  434 acaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaa 533  Q
    ||||||||||  |||| ||||||||||||||||||| |||||  ||||||||  ||||| ||||||||||||| ||| ||||| | ||||||| ||| ||    
T  48862014 acaaattaaacagacaatgagtttcttgcaaataacatattt-atttacatttaaaaagtcattattaatcta-ttattaaacagacaattattgatgaa 48862111  T
Q  534 attggtttcttgaaatgcatttt 556  Q
    ||||| ||||| |||||||||||    
T  48862112 attgggttcttcaaatgcatttt 48862134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 364 - 434
Target Start/End: Original strand, 52628100 - 52628170
Alignment:
Q  364 atattcggctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    |||| |||||||| ||||||||||||||||||||||||||||||| |||| |||| ||||||||| |||||    
T  52628100 atatccggctacctcaaataataaacattgagctaccccaaacaagttcaattgttgaaaattaagataaa 52628170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 281 - 434
Target Start/End: Complemental strand, 8762982 - 8762829
Alignment:
Q  281 caggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaa 380  Q
    ||||||||  ||||||||||  || | ||||||| ||||||||||||||||  ||||  |||| |||| |||||| ||  || |||||  ||||||||||    
T  8762982 caggggcggttcccttcattagcatgaggtagccatggctaccccaaaaaaagtattgttcttgaatatgttggtatatttttatatttagctaccccaa 8762883  T
Q  381 ataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    |||| ||| ||| |||||||||||| ||||| | ||||  ||||||||||||||    
T  8762882 ataaaaaatatttagctaccccaaataaatttatttgttaaaaattaacataaa 8762829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 312 - 407
Target Start/End: Original strand, 48840949 - 48841043
Alignment:
Q  312 gccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaaaca 407  Q
    |||||||||||||||||||| | |||| ||||||||  || ||| |  ||| |||| ||||||||| |||||||||||||||||||||||||||||    
T  48840949 gccttggctaccccaaaaaaaa-attattctttaattcgtcggtatgtatttatatccggctaccctaaataataaacattgagctaccccaaaca 48841043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 371 - 427
Target Start/End: Complemental strand, 54166216 - 54166160
Alignment:
Q  371 gctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaatta 427  Q
    |||| ||||||||||||||||||||||||| ||||||| |||||||||| |||||||    
T  54166216 gctatcccaaataataaacattgagctacctcaaacaagttcagttgtctaaaatta 54166160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 434
Target Start/End: Complemental strand, 16608662 - 16608578
Alignment:
Q  350 gttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    |||||| || ||| |||||  |||||||||||||||||| |||||||||||||||| || ||  |||  ||||||||||||||||    
T  16608662 gttggtatatatttatatttagctaccccaaataataaatattgagctaccccaaaaaagtttggttaccgaaaattaacataaa 16608578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 429 - 494
Target Start/End: Complemental strand, 43892586 - 43892522
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagac 494  Q
    |||| ||||||||||||  || |||||||||||||||||||||||||  |||||||| ||||||||    
T  43892586 catagacaaattaaatgtgcaatgagtttcttgcaaataacctattt-atttacatttgaaaagac 43892522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 513
Target Start/End: Complemental strand, 8762664 - 8762614
Alignment:
Q  462 caaataacctatttgttttacattggaaaagacattattaatctatttagta 513  Q
    |||||||| ||||||||| |||||| |||||||||||||| |||||||||||    
T  8762664 caaataacttatttgttt-acattgaaaaagacattattagtctatttagta 8762614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 5476447 - 5476394
Alignment:
Q  459 ttgcaaataacctatttgttttacattggaaaagacattattaatctatttagta 513  Q
    ||||||||||| ||||||||| |||||| |||||||||||||| | |||||||||    
T  5476447 ttgcaaataacttatttgttt-acattgaaaaagacattattagtgtatttagta 5476394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 427
Target Start/End: Complemental strand, 856931 - 856894
Alignment:
Q  390 attgagctaccccaaacaaattcagttgtcgaaaatta 427  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  856931 attgagctaacccaaacaagttcagttgtcgaaaatta 856894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 560 - 592
Target Start/End: Complemental strand, 5476347 - 5476315
Alignment:
Q  560 caacttttttaaatagctattgtcaatttttat 592  Q
    |||||||||||||||| ||||||||||||||||    
T  5476347 caacttttttaaatagttattgtcaatttttat 5476315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 560 - 592
Target Start/End: Complemental strand, 8762567 - 8762535
Alignment:
Q  560 caacttttttaaatagctattgtcaatttttat 592  Q
    |||||||||||||||| ||||||||||||||||    
T  8762567 caacttttttaaatagttattgtcaatttttat 8762535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 166; Significance: 1e-88; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 292 - 598
Target Start/End: Complemental strand, 40528392 - 40528085
Alignment:
Q  292 cccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacat 391  Q
    |||||||||| |||||| ||| ||||||||||  ||||||||||||||||||||||  |||||| |||||| ||||||| ||| || |||||||||||||    
T  40528392 cccttcattggcaagggatagtcttggctaccttaaaaaatatattaatctttaattggttggtataaatttatattcgactatcctaaataataaacat 40528293  T
Q  392 tgagctaccccaaacaaattcagttgtcgaaaattaacataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaa 491  Q
    ||||||||||||| |||||||||||| |||||| || |||||||||||||| |||| |||||||||||| ||||||||||||||| ||||||||| ||||    
T  40528292 tgagctaccccaagcaaattcagttgccgaaaactagcataaacaaattaagtggatattgagtttcttacaaataacctatttg-tttacattgaaaaa 40528194  T
Q  492 gacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcatttta--cacaacttttttaaatagctattgtcaatttt 589  Q
    ||||||||||||| |||||||||||| |||| ||| ||||||||||| ||||||||||||||||||  || ||     ||||||||||||||||||||||    
T  40528193 gacattattaatcaatttagtaaacgatcaaatatagataaaattggcttcttgaaatgcattttacccaaaaaaaaattaaatagctattgtcaatttt 40528094  T
Q  590 tatcctttg 598  Q
    |||||||||    
T  40528093 tatcctttg 40528085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 430 - 598
Target Start/End: Complemental strand, 16908717 - 16908551
Alignment:
Q  430 ataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgga 529  Q
    ||||| |||||||||||||| | |||||||| ||| |||||||||||||| |||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  16908717 ataaataaattaaatggacaat-agtttctttcaagtaacctatttgttt-acattgaaaaatacattattaatctatttagtaaacagtcaattatgga 16908620  T
Q  530 taaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    |||| |||| || |||||||||||||||| |||||||| ||||||  ||||||||||||||||||||||    
T  16908619 taaatttggctttttgaaatgcattttacccaacttttctaaataattattgtcaatttttatcctttg 16908551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 451 - 598
Target Start/End: Complemental strand, 40361080 - 40360936
Alignment:
Q  451 tgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatg 550  Q
    ||||||||||||||||||||||||||||| | ||   |||||||||||||||||||||| |||||| ||||||||||||||||||||   |||||||| |    
T  40361080 tgagtttcttgcaaataacctatttgttt-agatcataaaagacattattaatctattttgtaaacagtcaattatggataaaattg--atcttgaaaag 40360984  T
Q  551 cattttacacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    |||||| | ||| ||||||||||| ||||| |||||||||||| ||||    
T  40360983 cattttgcccaaattttttaaataactattttcaatttttatcatttg 40360936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 292 - 433
Target Start/End: Complemental strand, 16908979 - 16908840
Alignment:
Q  292 cccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacat 391  Q
    |||||||| ||||||||| ||||||||||||||||||||| |||||| |||| | |  |||||| || ||| |||| |||||||| ||||||||||| ||    
T  16908979 cccttcatggacaaggggcagccttggctaccccaaaaaa-atattattcttcatttggttggtatatatttatatccggctacctcaaataataaatat 16908881  T
Q  392 tgagctaccccaaacaaattcagttgtcgaaaattaacataa 433  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||    
T  16908880 tgagcta-cccaaacaaattcagttgttgaatattaacataa 16908840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 465 - 593
Target Start/End: Original strand, 7008942 - 7009069
Alignment:
Q  465 ataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatgcattttacacaact 564  Q
    ||||||||||||| | |||||||||||| |||||||||||||||| ||||||  ||  ||||||||||||||||||||||||||   |||||   |||||    
T  7008942 ataacctatttgtgt-acattggaaaaggcattattaatctattttgtaaacaatcgtttatggataaaattggtttcttgaaacagattttgtccaact 7009040  T
Q  565 tttttaaatagctattgtcaatttttatc 593  Q
    || |||||||| |||||||||||||||||    
T  7009041 ttgttaaatagatattgtcaatttttatc 7009069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 429 - 556
Target Start/End: Original strand, 34034105 - 34034230
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgg 528  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||  |||||||| |||||||||||||||||||| ||| ||||| | || |||| |    
T  34034105 catagacaaattaaatggacaatgagtttcttgcaaataacttattt-atttacatttgaaaagacattattaatcta-ttattaaacagacagttattg 34034202  T
Q  529 ataaaattggtttcttgaaatgcatttt 556  Q
    || ||||||| ||||| |||||||||||    
T  34034203 atgaaattgggttcttcaaatgcatttt 34034230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 434 - 555
Target Start/End: Complemental strand, 17695969 - 17695850
Alignment:
Q  434 acaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaa 533  Q
    ||||| |||||||||| ||||||||||||||||||| |||||  |||||||| ||||| |||||||||||||| ||| ||||| ||||||||| ||| ||    
T  17695969 acaaactaaatggacagtgagtttcttgcaaataacttattt-atttacatttgaaaaaacattattaatcta-ttattaaacagtcaattattgatgaa 17695872  T
Q  534 attggtttcttgaaatgcattt 555  Q
    ||||| ||||||||| ||||||    
T  17695871 attgggttcttgaaacgcattt 17695850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 429 - 598
Target Start/End: Complemental strand, 19948915 - 19948752
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgg 528  Q
    |||||||  |||||||||||| ||| |||||||||||||| ||| ||| ||||||||||| || | ||||||| || |||| ||||||| | ||||||||    
T  19948915 cataaacctattaaatggacaatgaatttcttgcaaataatctagttg-tttacattggagaaaatattattattccattttgtaaacgattaattatgg 19948817  T
Q  529 ataaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    |||||    | ||||||||||||||||| | |||||||| || |||| ||||||||||||||||| ||||    
T  19948816 ataaa----gcttcttgaaatgcattttgc-caacttttctatatagttattgtcaatttttatcatttg 19948752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 364 - 434
Target Start/End: Original strand, 22098943 - 22099013
Alignment:
Q  364 atattcggctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| || |||||||||||||||| |||||    
T  22098943 atattcggctaccccaaataaaaaatattgagctaccccaaacaagtttagttgtcgaaaattaagataaa 22099013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 429 - 508
Target Start/End: Complemental strand, 41640132 - 41640054
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatt 508  Q
    |||| |||||||||||| ||| ||||||||||||||||||| |||||  |||||||| ||||||||||||||||||||||    
T  41640132 catagacaaattaaatgtacaatgagtttcttgcaaataacatattt-atttacatttgaaaagacattattaatctatt 41640054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 276 - 434
Target Start/End: Complemental strand, 3498842 - 3498684
Alignment:
Q  276 acaagcaggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctac 375  Q
    |||| ||||||||  ||||||||||  || | ||||||| ||||||||||||||||  ||||| |||| |||| |||||| |   || |||||  |||||    
T  3498842 acaaccaggggcggttcccttcattagcatgaggtagccatggctaccccaaaaaaagtattattcttgaatatgttggtatgtttttatatttagctac 3498743  T
Q  376 cccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    ||||||||| ||| ||| |||||||||||| ||||| | ||||  ||||||||||||||    
T  3498742 cccaaataaaaaatatttagctaccccaaataaatttatttgttaaaaattaacataaa 3498684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 305 - 434
Target Start/End: Original strand, 34033839 - 34033967
Alignment:
Q  305 aggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaa 404  Q
    ||||||||||||||||||||||||||| |||||| |||| ||| ||| ||| |  ||| ||||  ||||||||||| |||||||||||  |||||| |||    
T  34033839 aggggtagccttggctaccccaaaaaaaatattattcttgaattagtcggtatgtattgatatctggctaccccaattaataaacatttggctacctcaa 34033938  T
Q  405 acaaattcagttgtcgaaaattaacataaa 434  Q
    |||| || ||||| | ||||||| ||||||    
T  34033939 acaagtttagttg-caaaaattagcataaa 34033967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 429 - 494
Target Start/End: Original strand, 13517580 - 13517644
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagac 494  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||  |||||||| ||||||||    
T  13517580 catagacaaattaaatgtacaatgagtttcttgcaaataacctattt-atttacatttgaaaagac 13517644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 429 - 494
Target Start/End: Complemental strand, 17769040 - 17768976
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagac 494  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||  |||||||| ||||||||    
T  17769040 catagacaaattaaatgtacaatgagtttcttgcaaataacctattt-atttacatttgaaaagac 17768976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 430 - 574
Target Start/End: Original strand, 42353164 - 42353304
Alignment:
Q  430 ataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgga 529  Q
    ||||||| |||||| ||||| | ||||| ||| ||||||| | ||||||| |||||| ||||  ||||| ||||||||||| ||||| ||||||||||||    
T  42353164 ataaacagattaaaaggacaataagttt-ttgaaaataacttgtttgttt-acattgaaaaa--cattaataatctatttattaaacagtcaattatgga 42353259  T
Q  530 taaaattggtttcttgaaatgcattttacacaacttttttaaata 574  Q
    ||||||||  ||| | |||| | |||| | ||| |||||||||||    
T  42353260 taaaattgacttcataaaatacgttttgcccaaattttttaaata 42353304  T

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Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 434
Target Start/End: Complemental strand, 19949097 - 19949035
Alignment:
Q  372 ctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    ||||||| |||||||||||||||||||   |||| || || ||||||||||||||||||||||    
T  19949097 ctaccccgaataataaacattgagctatttcaaataagtttagttgtcgaaaattaacataaa 19949035  T

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Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 430 - 535
Target Start/End: Original strand, 14521651 - 14521753
Alignment:
Q  430 ataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgga 529  Q
    |||||||||||||| | ||| | ||||  ||||||||||| | ||||||| |||||| |||| |||||| |||| |||||| ||||| ||||||||||||    
T  14521651 ataaacaaattaaaagtacaataagttg-ttgcaaataacttgtttgttt-acattgaaaaa-acattaataatatatttattaaacagtcaattatgga 14521747  T
Q  530 taaaat 535  Q
    ||||||    
T  14521748 taaaat 14521753  T

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Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 7008761 - 7008811
Alignment:
Q  281 caggggcgcatcccttcattgacaaggggtagccttggctaccccaaaaaa 331  Q
    |||||||| |||| |||||||  |||||||||||||||||||| |||||||    
T  7008761 caggggcgtatcctttcattgtgaaggggtagccttggctacctcaaaaaa 7008811  T

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Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 560 - 592
Target Start/End: Complemental strand, 3498423 - 3498391
Alignment:
Q  560 caacttttttaaatagctattgtcaatttttat 592  Q
    |||||||||||||||| ||||||||||||||||    
T  3498423 caacttttttaaatagttattgtcaatttttat 3498391  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 434
Target Start/End: Original strand, 42352990 - 42353054
Alignment:
Q  371 gctaccccaaataataaacattgagctaccccaaacaaa-ttcagttgtcgaaaattaacataaa 434  Q
    ||||| |||||||||||| |||||||||||||||| ||| ||   ||||||||||||| ||||||    
T  42352990 gctactccaaataataaatattgagctaccccaaataaacttggtttgtcgaaaattagcataaa 42353054  T

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Target: scaffold0186 (Bit Score: 86; Significance: 8e-41; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 429 - 598
Target Start/End: Original strand, 22726 - 22893
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgg 528  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||  |||||||||     
T  22726 cataaacatattaaatgggcattgaatttcttgcaaataacctatttgttt-acattggaaaaaacattattaatctattttgtaaacaatcaattatga 22824  T
Q  529 ataaaattggtttcttgaaatgcattttacacaacttttttaaatagctattgtcaatttttatcctttg 598  Q
    |||||||||  |||||||||| ||||||   ||| |||| ||||||| ||||||||||||||||| ||||    
T  22825 ataaaattgacttcttgaaat-cattttgtccaaattttctaaatagttattgtcaatttttatcatttg 22893  T

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Target: scaffold0795 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 5044 - 5190
Alignment:
Q  2 caattctaaattttttccatggggtgatgtcctctcggagaaggtcgaatgtgattatctctaataatgttaatggtgttcagatcgagggtgtggaagg 101  Q
    ||||||||||||||  ||| ||||||||||||||| ||||||||| ||| ||||||||||| | ||||||||||||||||||||| |||||| |||||||    
T  5044 caattctaaatttta-ccacggggtgatgtcctctaggagaaggttgaacgtgattatctcgattaatgttaatggtgttcagattgagggtttggaagg 5142  T
Q  102 ggtgaggaacgcaatgtttcaacatttttcagtcacattttatagaggt 150  Q
    ||||||||| ||| ||||||||||  |||||||| ||||||| ||||||    
T  5143 ggtgaggaatgcagtgtttcaaca-ctttcagtctcattttaaagaggt 5190  T

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Target: scaffold0361 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 294 - 434
Target Start/End: Original strand, 6917 - 7056
Alignment:
Q  294 cttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattg 393  Q
    |||||| || ||| |||||||||||||||||| |||||||||||| |||| |||   ||||| |||||| |||| |||||| || |||||||||| ||||    
T  6917 cttcatagataagaggtagccttggctacccccaaaaatatattattcttcaattgtttggtataaatttatatccggctaacctaaataataaatattg 7016  T
Q  394 agctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    ||||| |||||||||||| ||||||||||||||| ||||||    
T  7017 agcta-cccaaacaaatttagttgtcgaaaattagcataaa 7056  T

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Target: scaffold0002 (Bit Score: 56; Significance: 7e-23; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 430 - 525
Target Start/End: Complemental strand, 428426 - 428333
Alignment:
Q  430 ataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaatta 525  Q
    |||||||||||||||||||| | |||||||| ||||||| ||||||| || ||||||||||| |||||||||||||||||||||||| ||||||||    
T  428426 ataaacaaattaaatggacaat-agtttcttacaaataatctatttgctt-acattggaaaatacattattaatctatttagtaaacagtcaatta 428333  T

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Target: scaffold0002; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 371 - 434
Target Start/End: Complemental strand, 428611 - 428548
Alignment:
Q  371 gctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    |||||| |||||||||||||||||||||||| ||| ||||||||||||| |||||||| |||||    
T  428611 gctacctcaaataataaacattgagctaccctaaataaattcagttgtcaaaaattaatataaa 428548  T

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Target: scaffold0110 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 372 - 434
Target Start/End: Complemental strand, 7159 - 7097
Alignment:
Q  372 ctaccccaaataataaacattgagctaccccaaacaaattcagttgtcgaaaattaacataaa 434  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||    
T  7159 ctaccccaaataataaacattgagttaccccaaacaagttcagttgtcgaaaattaagataaa 7097  T

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Target: scaffold0005 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 429 - 575
Target Start/End: Complemental strand, 292332 - 292188
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatgg 528  Q
    |||| |||||||||||| ||| |||||||||||| ||||||||||||  |||| ||| ||||||||| |||||||||| ||| ||||| | ||||||| |    
T  292332 catagacaaattaaatgaacaatgagtttcttgcgaataacctattt-atttatatttgaaaagacactattaatcta-ttattaaacaggcaattattg 292235  T
Q  529 ataaaattggtttcttgaaatgcattttacacaacttttttaaatag 575  Q
    || ||||||| |||||||||  |||||| | |||| ||| |||||||    
T  292234 atgaaattgggttcttgaaacacattttgcccaacgtttctaaatag 292188  T

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Target: scaffold0481 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 429 - 502
Target Start/End: Original strand, 6701 - 6773
Alignment:
Q  429 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaa 502  Q
    |||| |||||||||||||||| ||| |||||||||||||||||||||  |||||||| ||||||||||||||||    
T  6701 catagacaaattaaatggacaatgaatttcttgcaaataacctattt-atttacatttgaaaagacattattaa 6773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 411
Target Start/End: Original strand, 6516 - 6562
Alignment:
Q  365 tattcggctaccccaaataataaacattgagctaccccaaacaaatt 411  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||    
T  6516 tattcggctacctcaaataataaatattgagctactccaaacaaatt 6562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1554 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold1554
Description:

Target: scaffold1554; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 451 - 569
Target Start/End: Original strand, 819 - 935
Alignment:
Q  451 tgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacggtcaattatggataaaattggtttcttgaaatg 550  Q
    |||||||| |||||||||||||||| | | ||||  ||||||| |||||||||||||| | ||||| | || |||| ||| ||||||| |||||||||||    
T  819 tgagtttcatgcaaataacctatttatat-acatctgaaaagatattattaatctatt-attaaacagacatttattgatgaaattgggttcttgaaatg 916  T
Q  551 cattttacacaactttttt 569  Q
    |||||| | |||| |||||    
T  917 cattttgcccaacattttt 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0271 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 434
Target Start/End: Original strand, 20141 - 20255
Alignment:
Q  321 accccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctaccccaaacaaattcag-ttgtc 419  Q
    ||||||||||||| |||| | || |||  |||||| |||| | | |||  ||||| |||||||||||| |||||||||||||||| |||||  | |||||    
T  20141 accccaaaaaataaattatttttgaattggttggtataaaattacatttagctactccaaataataaatattgagctaccccaaataaatttggtttgtc 20240  T
Q  420 gaaaattaacataaa 434  Q
    |||||||| ||||||    
T  20241 gaaaattagcataaa 20255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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