View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14371_low_10 (Length: 356)
Name: NF14371_low_10
Description: NF14371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14371_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 27802694 - 27802877
Alignment:
| Q |
1 |
atagattattgaaattagacaaagtttttcgttatgtttgattaatcatatgttagaatattattgtctcatataatacaagatagtattttaacatcca |
100 |
Q |
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| T |
27802694 |
atagattattgaaactagacaaagtttttcgttatgtttgattaatcatatgttagaatattat---ctcatataatacaagatagtattttaacatcca |
27802790 |
T |
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| Q |
101 |
aacataaatttaaaatattcacttaatacctaagaatacaacttaacatc-nnnnnnnatttgtgttctcctccttaagtatttcac |
186 |
Q |
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| T |
27802791 |
aacataaatttaaaatattcacttaatacctaagaatacaacttaacatcttttttttatttgtgttctcctccttaagtatttcac |
27802877 |
T |
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