View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14371_low_2 (Length: 594)
Name: NF14371_low_2
Description: NF14371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14371_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 464; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 93 - 576
Target Start/End: Complemental strand, 37002113 - 37001630
Alignment:
| Q |
93 |
gggaaatttttgcagtttcgataaattgatggattagagcaacatcgtcttataaattcatgtagtagaatagtttattgttatcaaattatgacacctc |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
37002113 |
gggaaatttttgcagtttcgataaattgatggattagagcaacatcgtcttatacattcatgtagtagaatagtttattgttatcaaattatgacaccgc |
37002014 |
T |
|
| Q |
193 |
tgagttagaaacttgataattaagaaacaaaattgacaaaatgaaatttcatgatcagaagaaatctaagaaagtaggtagtgtcatagtggtaccttag |
292 |
Q |
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||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37002013 |
tgagttagaaagttcataattaagaaacaaaattgacaaaatgaaatttcatgatcagaagaaatctaagaaagtaggtagtgtcatagtggtaccttag |
37001914 |
T |
|
| Q |
293 |
catgttgaggttcagaaacatcttgataaacaccaaccctaatatttcccgtaaattcaacactaggaacaaaatctccaaccaaaacatcttttttgtc |
392 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37001913 |
catgttgaggttcagaaacatcttgataaacaccaaccctgatatttcccgtaaattcaacactaggaacaaaatctccaaccaaaacatcttttttgtc |
37001814 |
T |
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| Q |
393 |
aacaaggtccatatcaaagagatgggagaaagacttacaatcaagaactgcaatgatgttaggattaacgttggtgaagaaagggaacgtgggtggaaca |
492 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37001813 |
aacaaggtccatatcaaagagatgggagaaagacttacaatcaagaactgcaatgatgttaggattaacgttggtgaagaaagggaacgtgggtggaaca |
37001714 |
T |
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| Q |
493 |
ttggtacggaacacagtacttttgtacttgtccattcgtgttctgaagaagttttctggcttctggaaccagaaataatctaac |
576 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37001713 |
ttggtacggaacacagtacttttgtacttgtccattcgtgttctgaagaagttttctggcttctggaaccagaaataatctaac |
37001630 |
T |
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