View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14372_high_12 (Length: 232)
Name: NF14372_high_12
Description: NF14372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14372_high_12 |
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Alignment Details
Target: chr5 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 28341112 - 28341310
Alignment:
| Q |
16 |
aatatgatggtcgagtatgatcgtatgtgtcgcgcttctccaaagcagccggtaagattgaggctcttcctcttccctgttcgtgctaacaacaagaacg |
115 |
Q |
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| T |
28341112 |
aatatgatggtcgagtatgatcgtatgtgtcgcgcttctccaaagcagccggtaagattgaggcttttcctcttccctgttcgtgctaacaacaagaacg |
28341211 |
T |
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| Q |
116 |
gccacaattcaagacctaacagtctccttgagttgctcaattccgttcacgttccaaagtttgaagattcatctcctccgccactggaagattcaactc |
214 |
Q |
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| T |
28341212 |
gccacaattcaagatcttacagtctctttgagttgctcaattccgttcacgttccaaaatttgaagattcatctcctccgccaatggaagattcaactc |
28341310 |
T |
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