View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14372_high_2 (Length: 563)
Name: NF14372_high_2
Description: NF14372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14372_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 509; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 15 - 547
Target Start/End: Original strand, 33044523 - 33045055
Alignment:
| Q |
15 |
atatggcagaagaaaaaatgactaaattatctaataaacttaaaacagctcacttttgtccattgtccccacattacagctaaagaaaaaatgatgtttg |
114 |
Q |
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| T |
33044523 |
atatggcagaagaaaaaatgactaaattatctaataaacttaaaacatctcacttttgtccattgtccccacattacagctaaagaaaaaatgatgtttg |
33044622 |
T |
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| Q |
115 |
atagcgaaatccatctgatgaacactactaaataaaattaaaaattgttccttcgtttaaggcgtaataaatacaccaaaagtaacagtgcacttattat |
214 |
Q |
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| T |
33044623 |
atagcgaaatccatctgatgaacactactaaataaaattaaaaatcattccttcgtttaaggcgtaataattacaccaaaagtaacagtgcacttattat |
33044722 |
T |
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| Q |
215 |
ctgatcacagattatataatgtcatatatccagactctgttgcttcctcgcactatgttaaatcaatcattctattgaggaagaaaacatataggcatga |
314 |
Q |
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| T |
33044723 |
ctgatcacagattatataatgtcatatatccagactctgttgcttcctcgcactatgttaaatcaatcattttattgaggaagaaaacatataggcatga |
33044822 |
T |
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| Q |
315 |
cagctagctgtttaaaaacatagaatcaaaatgtttaccagcaaaactattgaccaaattcaccttgaggtactcgatgatggcctctggcttgaatcta |
414 |
Q |
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| T |
33044823 |
cagctagctgtttaaaaacatagaagcaaaatgtttaccagcaaaactattgaccaaattcaccttgaggtactcgatgatggcctctggcttgaatcta |
33044922 |
T |
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| Q |
415 |
tgagcaatcttggactggctagactctgactctttcaccgatttattaataatttcaagggcttcacggtgcatggagttgcacttgtaaagttctacta |
514 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33044923 |
tgagcaatcttggactggctagactctgactctttcaccgatttattaataatttcaagggcttcacggtgcatggagttgcacttgtaaagttctacta |
33045022 |
T |
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| Q |
515 |
aagaaacatgataacttccttcttgaagtatct |
547 |
Q |
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| T |
33045023 |
aagaaacatgataacttccttcttgaagtatct |
33045055 |
T |
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