View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14372_low_7 (Length: 336)

Name: NF14372_low_7
Description: NF14372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14372_low_7
NF14372_low_7
[»] chr3 (1 HSPs)
chr3 (19-320)||(37462640-37462941)
[»] chr4 (1 HSPs)
chr4 (148-320)||(26575144-26575316)
[»] chr2 (20 HSPs)
chr2 (60-302)||(10353298-10353546)
chr2 (148-286)||(10372141-10372279)
chr2 (167-297)||(9283900-9284030)
chr2 (225-302)||(10348139-10348216)
chr2 (167-279)||(9292221-9292333)
chr2 (168-274)||(9274806-9274912)
chr2 (168-286)||(9321267-9321385)
chr2 (58-125)||(12006000-12006067)
chr2 (180-290)||(8573216-8573326)
chr2 (180-294)||(9060848-9060962)
chr2 (180-286)||(9316331-9316437)
chr2 (234-274)||(8579220-8579260)
chr2 (222-319)||(12012234-12012331)
chr2 (70-115)||(16269279-16269324)
chr2 (168-276)||(9328887-9328995)
chr2 (233-320)||(10336197-10336287)
chr2 (63-122)||(8573384-8573443)
chr2 (63-122)||(9061020-9061079)
chr2 (232-320)||(7115326-7115414)
chr2 (60-124)||(9316211-9316275)
[»] scaffold0667 (1 HSPs)
scaffold0667 (224-297)||(4830-4903)
[»] chr8 (1 HSPs)
chr8 (53-124)||(41966606-41966677)
[»] chr1 (4 HSPs)
chr1 (168-280)||(29467516-29467628)
chr1 (168-274)||(29423559-29423665)
chr1 (234-274)||(29443060-29443100)
chr1 (234-279)||(29453041-29453086)


Alignment Details
Target: chr3 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 19 - 320
Target Start/End: Original strand, 37462640 - 37462941
Alignment:
Q  19 gcaacatcaagtgcaaaactcttattactcttaatttgacttatttcaaccggaagaggaacctcgttaaaaatctcaaatgttaggttaaatgcgaaaa 118  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37462640 gcaacatcaagtccaaaactcttattactcttaatttgacttatttcaaccggaagaggaacctcgttaaaaatctcaaatgttaggttaaatgcgaaaa 37462739  T
Q  119 ttaaacgaggttcaaacagttcgttgttggcaacccaatgaatagaattagaattgtcaataaaaacccccatggtttgacaatattcaagagagtaggg 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37462740 ttaaacgaggttcaaacagttcgttgttggcaacccaatgaatagaattagaattgtcgataaaaacccccatggtttgacaatattcaagagagtaggg 37462839  T
Q  219 aaaactaggaactattttccacgagtttgttttggagctgaagagtctcacatgtggatcataaaaagggttttgtagatcgagaagccaagagattctg 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37462840 aaaactaggaactattttccacgagtttgttttggagctgaagagtctcacatgtggatcataaaaagggttttgtagatcgagaagccaagagattctg 37462939  T
Q  319 ag 320  Q
    ||    
T  37462940 ag 37462941  T

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Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 148 - 320
Target Start/End: Original strand, 26575144 - 26575316
Alignment:
Q  148 gcaacccaatgaatagaattagaattgtcaataaaaacccccatggtttgacaatattcaagagagtagggaaaactaggaactattttccacgagtttg 247  Q
    |||||||| |||| |||| ||||||| |||| |||||| ||||| ||| ||  ||| | ||||| ||| |||||| |||||| ||||||||| |||||||    
T  26575144 gcaacccagtgaagagaactagaattctcaacaaaaacacccattgttcgagtatagtaaagagcgtaaggaaaattaggaattattttccatgagtttg 26575243  T
Q  248 ttttggagctgaagagtctcacatgtggatcataaaaagggttttgtagatcgagaagccaagagattctgag 320  Q
    ||||  ||||||||||||| ||||||||||||||||||||||||||||||||||| |   |||||||||||||    
T  26575244 ttttcaagctgaagagtctaacatgtggatcataaaaagggttttgtagatcgagcaagtaagagattctgag 26575316  T

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Target: chr2 (Bit Score: 69; Significance: 6e-31; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 60 - 302
Target Start/End: Original strand, 10353298 - 10353546
Alignment:
Q  60 tatttcaaccggaagaggaacctcgttaaaaatctcaaatgttaggttaaatgcgaaaattaaacgaggttcaaacagtt---cgttgttgg---caacc 153  Q
    ||||||| | |||||||||||||| || ||| |||||| |||||||||||| |||| |||||||  ||||| ||||||||   | ||  | |   | |||    
T  10353298 tatttcatcaggaagaggaacctcattgaaagtctcaagtgttaggttaaacgcgagaattaaatcaggttgaaacagttgaactttcctcgtcgctacc 10353397  T
Q  154 caatgaatagaattagaattgtcaataaaaacccccatggtttgacaatattcaagagagtagggaaaactaggaactattttccacgagtttgttttgg 253  Q
    || |||| |||| ||||||| |||| |||||||||||| |||  |  ||| | |||||| || || ||| |||||| || |||||| |||||||||||      
T  10353398 cagtgaagagaactagaattctcaacaaaaacccccattgttaaagcatagtaaagagaataaggcaaattaggaattactttccatgagtttgttttca 10353497  T
Q  254 agctgaagagtctcacatgtggatcataaaaagggttttgtagatcgag 302  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10353498 agctgaagagtctgacatgtggatcataaaaagggttttgtagatcgag 10353546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 286
Target Start/End: Original strand, 10372141 - 10372279
Alignment:
Q  148 gcaacccaatgaatagaattagaattgtcaataaaaacccccatggtttgacaatattcaagagagtagggaaaactaggaactattttccacgagtttg 247  Q
    |||||||| ||||||||| |||||||||||| ||||||||||||||| ||| |||| | ||||  ||| || | | |||||| ||| ||||||||||| |    
T  10372141 gcaacccagtgaatagaactagaattgtcaacaaaaacccccatggtgtgataatactgaagaacgtacggcatagtaggaattatcttccacgagttag 10372240  T
Q  248 ttttggagctgaagagtctcacatgtggatcataaaaag 286  Q
     |||||||||||||||||  |||||||||||||||||||    
T  10372241 ctttggagctgaagagtcgaacatgtggatcataaaaag 10372279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 167 - 297
Target Start/End: Complemental strand, 9284030 - 9283900
Alignment:
Q  167 tagaattgtcaataaaaacccccatggtttgacaatattcaagagagtagggaaaactaggaactattttccacgagtttgttttggagctgaagagtct 266  Q
    ||||||| |||| |||||||||||||| ||||  ||| | || || |||||| | | |||||| ||||||||||||||||||||||||||||||||||||    
T  9284030 tagaattctcaacaaaaacccccatggcttgagcatagtaaacagtgtagggcataataggaattattttccacgagtttgttttggagctgaagagtct 9283931  T
Q  267 cacatgtggatcataaaaagggttttgtaga 297  Q
      |||||| || |||||||| ||||||||||    
T  9283930 ggcatgtgaatgataaaaagagttttgtaga 9283900  T

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Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 302
Target Start/End: Original strand, 10348139 - 10348216
Alignment:
Q  225 aggaactattttccacgagtttgttttggagctgaagagtctcacatgtggatcataaaaagggttttgtagatcgag 302  Q
    ||||| ||| ||||| |||||||||||  |||||||||||||||| |||||||||||||||||||| |||||||||||    
T  10348139 aggaattatcttccatgagtttgttttcaagctgaagagtctcacttgtggatcataaaaagggttctgtagatcgag 10348216  T

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Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 9292221 - 9292333
Alignment:
Q  167 tagaattgtcaataaaaacccccatggtttgacaatattcaagagagtagggaaaactaggaactattttccacgagtttgttttggagctgaagagtct 266  Q
    ||||||| | || |||||||||||| | ||||  ||||| ||||| ||| || | ||||||||  |||||||||||||| ||||||||||||||||||||    
T  9292221 tagaattctgaacaaaaacccccatagcttgaacatattgaagagcgtacggcatactaggaatgattttccacgagttagttttggagctgaagagtct 9292320  T
Q  267 cacatgtggatca 279  Q
    ||| |||||||||    
T  9292321 cacctgtggatca 9292333  T

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Target: chr2; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 168 - 274
Target Start/End: Original strand, 9274806 - 9274912
Alignment:
Q  168 agaattgtcaataaaaacccccatggtttgacaatattcaagagagtagggaaaactaggaactattttccacgagtttgttttggagctgaagagtctc 267  Q
    |||||| |||| ||||| |||||||| ||||  ||||| ||||| ||| || | ||| |||| |||||||||||||||||||||  ||||||||||||||    
T  9274806 agaattctcaacaaaaatccccatggcttgaacatatttaagagcgtacggcatactgggaattattttccacgagtttgttttcaagctgaagagtctc 9274905  T
Q  268 acatgtg 274  Q
    |||||||    
T  9274906 acatgtg 9274912  T

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Target: chr2; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 168 - 286
Target Start/End: Original strand, 9321267 - 9321385
Alignment:
Q  168 agaattgtcaataaaaacccccatggtttgacaatattcaagagagtagggaaaactaggaactattttccacgagtttgttttggagctgaagagtctc 267  Q
    |||||| |||| |||||||||||||  ||||  |||   ||||||||| || | ||| |||| ||||||||||||||||||| | ||||||||||||||     
T  9321267 agaattctcaacaaaaacccccatgaattgagcatagataagagagtacggcatactgggaattattttccacgagtttgttatagagctgaagagtctg 9321366  T
Q  268 acatgtggatcataaaaag 286  Q
    ||||||| |||||||||||    
T  9321367 acatgtgaatcataaaaag 9321385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 12006067 - 12006000
Alignment:
Q  58 cttatttcaaccggaagaggaacctcgttaaaaatctcaaatgttaggttaaatgcgaaaattaaacg 125  Q
    ||||||||| | |||| |||||||||||| |||| ||||| |||||||||||| ||||||||||||||    
T  12006067 cttatttcatcaggaaaaggaacctcgttgaaaacctcaagtgttaggttaaacgcgaaaattaaacg 12006000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 290
Target Start/End: Complemental strand, 8573326 - 8573216
Alignment:
Q  180 aaaaacccccatggtttgacaatattcaagagagtagggaaaactaggaactattttccacgagtttgttttggagctgaagagtctcacatgtggatca 279  Q
    |||||||||||||| ||||  ||||| ||||| ||| ||   ||| |||| | |||||||||||||||||||  |||| |||||| | ||||||| ||||    
T  8573326 aaaaacccccatggcttgaacatattgaagagcgtatggcgtactgggaattgttttccacgagtttgttttcaagctaaagagtgtgacatgtgaatca 8573227  T
Q  280 taaaaagggtt 290  Q
    |||||||||||    
T  8573226 taaaaagggtt 8573216  T

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Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 9060962 - 9060848
Alignment:
Q  180 aaaaacccccatggtttgacaatattcaagagagtagggaaaactaggaactattttccacgagtttgttttggagctgaagagtctcacatgtggatca 279  Q
    |||||||||||||| ||||  ||||| ||||| ||| || | ||| |||| | |||||||||||||||||||  |||| ||||| || ||||||| ||||    
T  9060962 aaaaacccccatggcttgaacatattgaagagcgtacggcatactgggaattgttttccacgagtttgttttcaagctaaagagactgacatgtgaatca 9060863  T
Q  280 taaaaagggttttgt 294  Q
    ||||||  |||||||    
T  9060862 taaaaaatgttttgt 9060848  T

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Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 286
Target Start/End: Original strand, 9316331 - 9316437
Alignment:
Q  180 aaaaacccccatggtttgacaatattcaagagagtagggaaaactaggaactattttccacgagtttgttttggagctgaagagtctcacatgtggatca 279  Q
    |||||||||||||| ||||  ||||| ||||| ||| || | ||| |||| | |||||||||||||||||||  |||| ||||| || ||||||| ||||    
T  9316331 aaaaacccccatggcttgaacatattgaagagcgtacggcatactgggaattgttttccacgagtttgttttcaagctaaagagactgacatgtgaatca 9316430  T
Q  280 taaaaag 286  Q
    |||||||    
T  9316431 taaaaag 9316437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 8579260 - 8579220
Alignment:
Q  234 tttccacgagtttgttttggagctgaagagtctcacatgtg 274  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  8579260 tttccacgagtttgttttggagctgaagagtctcacctgtg 8579220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 319
Target Start/End: Complemental strand, 12012331 - 12012234
Alignment:
Q  222 actaggaactattttccacgagtttgttttggagctgaagagtctcacatgtggatcataaaaagggttttgtagatcgagaagccaagagattctga 319  Q
    |||||||| || |||||||||||||||||| ||| |||||||||| |||| || |||| ||  || |||||||| ||| |  | ||||||||||||||    
T  12012331 actaggaagtactttccacgagtttgttttcgaggtgaagagtctgacatatgaatcaaaagtagagttttgtaaatcaacgaaccaagagattctga 12012234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 16269279 - 16269324
Alignment:
Q  70 ggaagaggaacctcgttaaaaatctcaaatgttaggttaaatgcga 115  Q
    ||||||||||||||||| |||||||||| |||||||||||| ||||    
T  16269279 ggaagaggaacctcgttgaaaatctcaagtgttaggttaaacgcga 16269324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 276
Target Start/End: Original strand, 9328887 - 9328995
Alignment:
Q  168 agaattgtcaataaaaacccccatggtttgacaatattcaagagagtagggaaaactaggaactattttccacgagtttgttttggagctgaagagtctc 267  Q
    |||||| ||||  ||||||||| || |||||  |||  |||||| |||||| | |  ||||| ||||||||| ||||||||||| ||| ||||||||||     
T  9328887 agaattctcaaccaaaacccccgtgttttgagcatagacaagagcgtagggcatagcaggaattattttccaagagtttgttttagagttgaagagtctg 9328986  T
Q  268 acatgtgga 276  Q
    |||||||||    
T  9328987 acatgtgga 9328995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 320
Target Start/End: Original strand, 10336197 - 10336287
Alignment:
Q  233 ttttccacgagtttgttttggagctgaagagtctcacatgtggatcataaaaag---ggttttgtagatcgagaagccaagagattctgag 320  Q
    ||||||| ||||||||||| |||||||||||| ||| ||||| || || |||||   ||| |||||||||||  | |||||||||||||||    
T  10336197 ttttccaagagtttgttttcgagctgaagagtgtcaaatgtgaattatcaaaagtatggtgttgtagatcgacgaaccaagagattctgag 10336287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 8573443 - 8573384
Alignment:
Q  63 ttcaaccggaagaggaacctcgttaaaaatctcaaatgttaggttaaatgcgaaaattaa 122  Q
    |||||| ||||||||||||||||  ||||| |||| ||| ||||||||||||| ||||||    
T  8573443 ttcaacaggaagaggaacctcgtagaaaatttcaagtgtgaggttaaatgcgacaattaa 8573384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 9061079 - 9061020
Alignment:
Q  63 ttcaaccggaagaggaacctcgttaaaaatctcaaatgttaggttaaatgcgaaaattaa 122  Q
    |||||| |||||||||||||| || ||||| |||| ||| ||||||||||||| ||||||    
T  9061079 ttcaacgggaagaggaacctcattgaaaatttcaagtgtgaggttaaatgcgacaattaa 9061020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 320
Target Start/End: Complemental strand, 7115414 - 7115326
Alignment:
Q  232 attttccacgagtttgttttggagctgaagagtctcacatgtggatcataaaaagggttttgtagatcgagaagccaagagattctgag 320  Q
    ||||||||||||||||||||  | ||||||||||| |  |||| ||||||||||| |||| || ||| |   | |||||||||||||||    
T  7115414 attttccacgagtttgttttcaaactgaagagtctgatctgtgaatcataaaaagagtttggtggattgcataaccaagagattctgag 7115326  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 9316211 - 9316275
Alignment:
Q  60 tatttcaaccggaagaggaacctcgttaaaaatctcaaatgttaggttaaatgcgaaaattaaac 124  Q
    ||||||| | |||||||||||| | || |||||||||| |||||||||||| |||| ||| ||||    
T  9316211 tatttcagcaggaagaggaaccacattgaaaatctcaagtgttaggttaaacgcgacaatgaaac 9316275  T

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Target: scaffold0667 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 4830 - 4903
Alignment:
Q  224 taggaactattttccacgagtttgttttggagctgaagagtctcacatgtggatcataaaaagggttttgtaga 297  Q
    |||||| ||||||||||||||| |||||  |||| |||||||| ||||||||||||||||||||||||||||||    
T  4830 taggaattattttccacgagttggttttcaagctaaagagtctaacatgtggatcataaaaagggttttgtaga 4903  T

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Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 41966677 - 41966606
Alignment:
Q  53 tttgacttatttcaaccggaagaggaacctcgttaaaaatctcaaatgttaggttaaatgcgaaaattaaac 124  Q
    |||||| ||||||| | ||||||||||||| ||| |||||||||| |||||||||||| |||| ||||||||    
T  41966677 tttgacctatttcagcaggaagaggaacctggttgaaaatctcaagtgttaggttaaacgcgacaattaaac 41966606  T

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Target: chr1 (Bit Score: 37; Significance: 0.000000000008; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 280
Target Start/End: Complemental strand, 29467628 - 29467516
Alignment:
Q  168 agaattgtcaataaaaacccccatggtttgacaatattcaagagagtagggaaaactaggaactattttccacgagtttgttttggagctgaagagtctc 267  Q
    |||||| |||| ||||||| |||||||||||  ||| | ||||||||| || | ||||| || || |||||| ||||| ||||| |||||||||||| |     
T  29467628 agaattctcaacaaaaaccaccatggtttgaggatagtaaagagagtacggcatactagaaagtactttccaggagttcgttttcgagctgaagagtgta 29467529  T
Q  268 acatgtggatcat 280  Q
    ||||||| |||||    
T  29467528 acatgtgaatcat 29467516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 274
Target Start/End: Original strand, 29423559 - 29423665
Alignment:
Q  168 agaattgtcaataaaaacccccatggtttgacaatattcaagagagtagggaaaactaggaactattttccacgagtttgttttggagctgaagagtctc 267  Q
    |||||| |||| |||||||||||| ||||||  ||| | ||||| ||| || |   |||||| |  |||||||||||||||||| |||||||||||||||    
T  29423559 agaattctcaacaaaaacccccattgtttgagcatagtaaagagtgtaaggcatggtaggaagttctttccacgagtttgttttcgagctgaagagtctc 29423658  T
Q  268 acatgtg 274  Q
     ||||||    
T  29423659 gcatgtg 29423665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 29443100 - 29443060
Alignment:
Q  234 tttccacgagtttgttttggagctgaagagtctcacatgtg 274  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  29443100 tttccacgagtttgttttgaagctgaagagtctaacatgtg 29443060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 29453086 - 29453041
Alignment:
Q  234 tttccacgagtttgttttggagctgaagagtctcacatgtggatca 279  Q
    ||||||||||||  |||| |||||||||||||||||||||| ||||    
T  29453086 tttccacgagttcattttcgagctgaagagtctcacatgtgaatca 29453041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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