View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14373_high_1 (Length: 291)
Name: NF14373_high_1
Description: NF14373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14373_high_1 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 19 - 291
Target Start/End: Complemental strand, 914597 - 914325
Alignment:
| Q |
19 |
aatcctcacatattctaagatttttaacaatgcgaatgcacgattcattcctcctactaattagcccatagcaaactgctaacttttcactatgccatag |
118 |
Q |
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| T |
914597 |
aatcctcacatattctaagatttttaacaatgcgaatgcaggattcattcctcctactaattagcccatagcaaactgctaacttttcactatgccatag |
914498 |
T |
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| Q |
119 |
aaccaattcttttttatcttcctcttctaaatcaatcaaaatgcctgaagtactaggtttgtagccgaccaacttcaatttactgactacctcatctaac |
218 |
Q |
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| T |
914497 |
aaccaattcttttttatcttcctcttctaaatcaatcaaaatgcctgaagtactaggtttgtagccgaccaacttcaatttactgactacctcatctaac |
914398 |
T |
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| Q |
219 |
ttctcatatatctcatctgactgtttatgatatctatcagccatcataaacatatgcacctgattgtttattt |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
914397 |
ttctcatatatctcatctgactgtttatgatatctatcagccatcataaacatatgcacctgattgtttattt |
914325 |
T |
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