View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14374_low_7 (Length: 452)
Name: NF14374_low_7
Description: NF14374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14374_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 270; Significance: 1e-150; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 1 - 442
Target Start/End: Original strand, 35044673 - 35045138
Alignment:
| Q |
1 |
ataacatggaaaaatactgcaataatctattgtnnnnnnnntagatatgtgcacaatcg----tgtcaattggtgcagtttaactatcgtaaccattgat |
96 |
Q |
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| T |
35044673 |
ataacatggaaaaatactgcaataatttattgtaaaaaaa-tagacatctgcacaatcgatcgtgccaattggtgcagtttaactatcgtaacaattgat |
35044771 |
T |
|
| Q |
97 |
ctacatgaaggaagctcaatgcgaggatcatga-gagaagaaaaaagaaattgagaatggagtaatcatcaagacagaaatatgaacggattaaataaat |
195 |
Q |
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| T |
35044772 |
c-acatgaaagaagctcaaagcgaggatcatgaagagaagaaaaaagaaattgagaatagagtaatcatcaagacagaaatatgaacggattaaataaaa |
35044870 |
T |
|
| Q |
196 |
aagttaatcaaaccaataatttccaaatgcactttgagtaacttgacatcaattaatttattaaatcaacttaaaaacaacttaaattgagaataggtga |
295 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||| |
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| T |
35044871 |
aagttaatgaaaccaataatttccaaatgcactttgagtaacttgacatcaattaatttattaaatcacctttaaaacatcttaaattgagaataggtga |
35044970 |
T |
|
| Q |
296 |
cttg---------------------aataacttaaataactcacttctagctttctaactactctttaatcacaactaccacattctcttattttatttc |
374 |
Q |
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|||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
35044971 |
cttgaagaagttttctcaagaaaaaaaaaacttaaataactcacttctagctttctaactactctctaatcacaactaccacattctcttattttatttc |
35045070 |
T |
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| Q |
375 |
acttcaaaccttaattgaataaaaatgggataaaatccactgacggaaccataccatgatgccctttg |
442 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |
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| T |
35045071 |
acttcaaaccttaattgaataaaaatgtgataaaatccactgactgaaccataccatgatgccctttg |
35045138 |
T |
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