View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14376_high_37 (Length: 345)
Name: NF14376_high_37
Description: NF14376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14376_high_37 |
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Alignment Details
Target: chr2 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 7431050 - 7431381
Alignment:
| Q |
1 |
acttggcatgattgatagccaataatccacacaaactcaaatatccttaaacaatctttttatttcctttctcacgacctctcttcattttctggctgcc |
100 |
Q |
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| T |
7431050 |
acttggcatgattgatagccaataatccacacaaactcaaatatccttaaacaatctttttatttcctttctcacgacctctcttcattttctggctgcc |
7431149 |
T |
|
| Q |
101 |
tcctttaaattttataggctttccaatagttatgtagatagagatgaaaataacaacaattttcatatttcataaatctagttgaagtttctaaaattga |
200 |
Q |
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| T |
7431150 |
tcctttaaattttataggctttccaatagttatgtagatagagatgaaaataacaacaattttcatatttcataaatctagttgaagtttctaaaattga |
7431249 |
T |
|
| Q |
201 |
caaatgannnnnnnnnnnnatataataaagagccatgttcccattctgatgtaag----atagggtaatttaatacttcgcaaattatcctaataggact |
296 |
Q |
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||||||| ||| ||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
7431250 |
caaatgagtgtgcgtgtgtgtat-ataaagagccatgttcccattctgaaggaagatatatagggtaatttaatacttcgcaaattatcctaataggact |
7431348 |
T |
|
| Q |
297 |
tttctctaaatttactcctattcgcaaagaatt |
329 |
Q |
| |
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||||||||||||||||||||||||||||||||| |
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| T |
7431349 |
tttctctaaatttactcctattcgcaaagaatt |
7431381 |
T |
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