View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14376_low_27 (Length: 410)
Name: NF14376_low_27
Description: NF14376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14376_low_27 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 345; Significance: 0; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 13 - 390
Target Start/End: Complemental strand, 1758512 - 1758135
Alignment:
| Q |
13 |
acaaataacaaacaaaacccattattccaaatcnnnnnnngattacttttttagcaagaaacacaagtttcaacacataccattgaatcagattcagggg |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1758512 |
acaaaaaacaaacaaaacccattattccaaatcaaaaaaagattacttttttagcaagaaacacaagtttcaacacataccattgaatcagattcagggg |
1758413 |
T |
 |
| Q |
113 |
tggttttttcagcagagttcaaataacgagcaactgcttctttaacctcagaaggatcaataacttcagatatacatctcctgattggaggcagaggctg |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1758412 |
tggttttttcagcagagttcaaataacgagcaactgcttctttaacctcagaaggatcaataacttcagatatacatctcctgattggaggcagaggctg |
1758313 |
T |
 |
| Q |
213 |
caaagcagttgacagcccttttaccggaatggattgatctggcgaggtgcatggatcagagacacagcggctaagagcattcccgcggagactgaaagga |
312 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1758312 |
caaagcagttgatagcccttttaccggaatggattgatctggcgaggtgcatggatcagagacacagcggctaagagcattcccgcggagactgaaagga |
1758213 |
T |
 |
| Q |
313 |
agtgtaatggcagagaagccattacgggtgagattgcttgcgtcaaaagaatgcttcttgagtgatggttggtgagca |
390 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1758212 |
agtgtaatggcggagaagccattacgggtgagattgcttgcgtcaaaagaatgcttcttgagtgatggttggtgagca |
1758135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 19 - 390
Target Start/End: Original strand, 29568110 - 29568482
Alignment:
| Q |
19 |
aacaaacaaaacccattattccaaa-tcnnnnnnngattacttttttagcaagaaacacaagtttcaacacataccattgaatcagattcaggggtggtt |
117 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
29568110 |
aacaaacaaaacccattattccaaaataaaaaaaagattacttttttagcaagaaacacatgtttcaacacataccaatgaatcagattcaggggtggtt |
29568209 |
T |
 |
| Q |
118 |
ttttcagcagagttcaaataacgagcaactgcttctttaacctcagaaggatcaataacttcagatatacatctcctgattggaggcagaggctgcaaag |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
29568210 |
ttttcagcagagttcaaataacgagcaactgcttctttaacctcagaaggatcaataacttcagatatacatctactgatcggaggcagaggctgcaaag |
29568309 |
T |
 |
| Q |
218 |
cagttgacagcccttttaccggaatggattgatctggcgaggtgcatggatcagagacacagcggctaagagcattcccgcggagactgaaaggaagtgt |
317 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
29568310 |
cagttgacagcccttttaccggcatggattgatccggcaaggtgcatggatcagagacacagcggctaagagcattcccacggagactgaaaggaagtgt |
29568409 |
T |
 |
| Q |
318 |
aatggcagagaagccattacgggtgagattgcttgcgtcaaaagaatgcttcttgagtgatggttggtgagca |
390 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||| |
|
|
| T |
29568410 |
aatggcggagaagccattacgggtgagattgcttgcgtcgaaagaatgcttcttggatgatagttggtgagca |
29568482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 53 - 390
Target Start/End: Complemental strand, 29168579 - 29168242
Alignment:
| Q |
53 |
gattacttttttagcaagaaacacaagtttcaacacataccattgaatcagattcaggggtggttttttcagcagagttcaaataacgagcaactgcttc |
152 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||| |
|
|
| T |
29168579 |
gattacttttttagcaagaaacacaattttcaacacataccattgaatcagattcaggggtggttctttcagaagagttcaaataaagagcaactgcttc |
29168480 |
T |
 |
| Q |
153 |
tttaacctcagaaggatcaataacttcagatatacatctcctgattggaggcagaggctgcaaagcagttgacagcccttttaccggaatggattgatct |
252 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
29168479 |
tttaaccttagaaggatcaataacttcagatatacatctactgatcggaggcagaggctgcaaagcagttgacagcccttttaccggcatggattgatcc |
29168380 |
T |
 |
| Q |
253 |
ggcgaggtgcatggatcagagacacagcggctaagagcattcccgcggagactgaaaggaagtgtaatggcagagaagccattacgggtgagattgcttg |
352 |
Q |
| |
|
||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
29168379 |
ggcaaggtgcatggatcagagacacagcagctaagagcattcccacggagactgaaaggaagtgtaatggtggagaagccattacgggtgagattgcttg |
29168280 |
T |
 |
| Q |
353 |
cgtcaaaagaatgcttcttgagtgatggttggtgagca |
390 |
Q |
| |
|
||| ||||||||||| ||| |||| ||||||||||| |
|
|
| T |
29168279 |
cgttgaaagaatgcttattggatgatagttggtgagca |
29168242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 53 - 390
Target Start/End: Complemental strand, 27918974 - 27918637
Alignment:
| Q |
53 |
gattacttttttagcaagaaacacaagtttcaacacataccattgaatcagattcaggggtggttttttcagcagagttcaaataacgagcaactgcttc |
152 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
27918974 |
gattacttttttagcaagaaacacaagtttcaacacacaccattgaatcagattcaggggtggttttttcagcagagttcaaataacaagaaactgcttc |
27918875 |
T |
 |
| Q |
153 |
tttaacctcagaaggatcaataacttcagatatacatctcctgattggaggcagaggctgcaaagcagttgacagcccttttaccggaatggattgatct |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||| ||| |||||| |||||||||||||||||| |
|
|
| T |
27918874 |
tttaacctcagaaggatcaataacttcagatatacatctcctgatcggagggagaggcggcaaagcagtcgacgaccctttaaccggaatggattgatct |
27918775 |
T |
 |
| Q |
253 |
ggcgaggtgcatggatcagagacacagcggctaagagcattcccgcggagactgaaaggaagtgtaatggcagagaagccattacgggtgagattgcttg |
352 |
Q |
| |
|
||| | ||||||||||| || ||||||| | |||||| || || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
27918774 |
ggcaaagtgcatggatcggatacacagcagtgaagagcgttgccacggagactgaaaggaagtgtaatggcggagaagccattacgggtgagattgcttg |
27918675 |
T |
 |
| Q |
353 |
cgtcaaaagaatgcttcttgagtgatggttggtgagca |
390 |
Q |
| |
|
|| || |||||||||||||| |||| ||||||||||| |
|
|
| T |
27918674 |
cgccagaagaatgcttcttggatgatagttggtgagca |
27918637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 53 - 390
Target Start/End: Complemental strand, 29425630 - 29425283
Alignment:
| Q |
53 |
gattacttttttagcaagaaacacaagtttca----------acacataccattgaatcagattcaggggtggttttttcagcagagttcaaataacgag |
142 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||||||||||||||| || |
|
|
| T |
29425630 |
gattacttttttagcaagaaacacaagtttcataataatccaacacataccaatgaatcagattcaggtgtagttttttcagcagagttcaaataacaag |
29425531 |
T |
 |
| Q |
143 |
caactgcttctttaacctcagaaggatcaataacttcagatatacatctcctgattggaggcagaggctgcaaagcagttgacagcccttttaccggaat |
242 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| || |
|
|
| T |
29425530 |
aaactgcttctttaaccttataaggatcaataacttcatatatacatctactgatcggaggcagaggctgcaaagcagttgacggcccttttaccggcat |
29425431 |
T |
 |
| Q |
243 |
ggattgatctggcgaggtgcatggatcagagacacagcggctaagagcattcccgcggagactgaaaggaagtgtaatggcagagaagccattacgggtg |
342 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
29425430 |
ggattgattcggcaaggtgcatggatcagagacacagcggctaagagcattcccacggagactgaaaggaagtgtaatggcagagaagccattacgcatg |
29425331 |
T |
 |
| Q |
343 |
agattgcttgcgtcaaaagaatgcttcttgagtgatggttggtgagca |
390 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
29425330 |
agattgcttgcgtcaaaagaatgcttcttggatgatggttggtgagca |
29425283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 53 - 293
Target Start/End: Complemental strand, 38157592 - 38157354
Alignment:
| Q |
53 |
gattacttttttagcaagaaacacaagtttcaacacataccattgaatcagattcaggggtggttttttcagcagagttcaaataacgagcaactgcttc |
152 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| || ||||| ||| |
|
|
| T |
38157592 |
gattactattttagcaagaaaaacaagtttcaacacataccattgaatcagattcagatgtaattttttcagcagagttcaaataacaagaaactgtttc |
38157493 |
T |
 |
| Q |
153 |
tttaacctcagaaggatcaataacttcagatatacatctcctgattggaggcagaggctgcaaagcagttgacagcccttttaccggaatggattgatct |
252 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||| ||||| ||||||||||| |
|
|
| T |
38157492 |
tttaacctcagaaggatcaataacttcagatatacatctcctgattagaggcagaggcggcaaaccagttgacgaccctttaaccggcatggattgatcc |
38157393 |
T |
 |
| Q |
253 |
ggcgaggtgcatggatcagagacacagcggctaagagcatt |
293 |
Q |
| |
|
||| || |||||| ||| ||||||||||| ||||||||| |
|
|
| T |
38157392 |
ggccag--gcatgggtcattgacacagcggcgaagagcatt |
38157354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 29569708 - 29569813
Alignment:
| Q |
285 |
aagagcattcccgcggagactgaaaggaagtgtaatggcagagaagccattacgggtgagattgcttgcgtcaaaagaatgcttcttgagtgatggttgg |
384 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| |
|
|
| T |
29569708 |
aagagcattgccacggagactgaaaggaagtgtaatggcggagaagccattacgggtgagattgcttgcgtcggaagaatgcttcttggatgatagttgg |
29569807 |
T |
 |
| Q |
385 |
tgagca |
390 |
Q |
| |
|
|||||| |
|
|
| T |
29569808 |
tgagca |
29569813 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 287; Significance: 1e-161; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 19 - 386
Target Start/End: Original strand, 27521077 - 27521444
Alignment:
| Q |
19 |
aacaaacaaaacccattattccaaatcnnnnnnngattacttttttagcaagaaacacaagtttcaacacataccattgaatcagattcaggggtggttt |
118 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27521077 |
aacaaacaaaacccattattccaaatcaaaaaaagagtacttttttatcaagaaacacaagtttcaacacataccattgaatcagattcaggggtggttt |
27521176 |
T |
 |
| Q |
119 |
tttcagcagagttcaaataacgagcaactgcttctttaacctcagaaggatcaataacttcagatatacatctcctgattggaggcagaggctgcaaagc |
218 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| |
|
|
| T |
27521177 |
ttttagcagagttcaaataacgagctactgcttctttaacctcaaaaggatcaataacttcagatatacatctgctgatcggaggctgaggctgcaaagc |
27521276 |
T |
 |
| Q |
219 |
agttgacagcccttttaccggaatggattgatctggcgaggtgcatggatcagagacacagcggctaagagcattcccgcggagactgaaaggaagtgta |
318 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27521277 |
agttgacggcccttttaccggcatggattgatccggcaaggtgcaaggatcagagacacagcggctaagagcattcccgcggagactgaaaggaagtgta |
27521376 |
T |
 |
| Q |
319 |
atggcagagaagccattacgggtgagattgcttgcgtcaaaagaatgcttcttgagtgatggttggtg |
386 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
27521377 |
atggcagagaagccattacgggtgagattgcttgcgtcaaaagaatgcttcttggatgatggttggtg |
27521444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 13 - 387
Target Start/End: Complemental strand, 27462364 - 27461990
Alignment:
| Q |
13 |
acaaataacaaacaaaacccattattccaaatcnnnnnnngattacttttttagcaagaaacacaagtttcaacacataccattgaatcagattcagggg |
112 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27462364 |
acaaaaaacaaacaaaacccaatattccaaatcaaaaaaagtttacttttttagcaagaaacacaagtttcaacacataccattgaatcagattcagggg |
27462265 |
T |
 |
| Q |
113 |
tggttttttcagcagagttcaaataacgagcaactgcttctttaacctcagaaggatcaataacttcagatatacatctcctgattggaggcagaggctg |
212 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
27462264 |
tggttttttcagcacagttcaaataacgagctactgcttctttaacctcagtaggatcaataacttcagatatacatctgctgatcggaggcagaggctg |
27462165 |
T |
 |
| Q |
213 |
caaagcagttgacagcccttttaccggaatggattgatctggcgaggtgcatggatcagagacacagcggctaagagcattcccgcggagactgaaagga |
312 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
27462164 |
caaagcagttgacggcccttttaccggcatggattgatccggaaaggtgcatggatcagagacacagcggctaagagcatttccacggagactgaaagga |
27462065 |
T |
 |
| Q |
313 |
agtgtaatggcagagaagccattacgggtgagattgcttgcgtcaaaagaatgcttcttgagtgatggttggtga |
387 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
27462064 |
agtgtaatggcagagaagccattacgggtgagattgcttgcgtcaaaagaatgcttcttggatgatggttggtga |
27461990 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 13 - 390
Target Start/End: Complemental strand, 18986465 - 18986087
Alignment:
| Q |
13 |
acaaataacaaacaaaacccattattccaaatcnnnnnnn-gattacttttttagcaagaaacacaagtttcaacacataccattgaatcagattcaggg |
111 |
Q |
| |
|
||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
18986465 |
acaaaaaacaaacaaaacccattattccaagtcaaaaaaaagattacttttttagcaagaaacacaagtttcaacacataccattgaatcagattcaagg |
18986366 |
T |
 |
| Q |
112 |
gtggttttttcagcagagttcaaataacgagcaactgcttctttaacctcagaaggatcaataacttcagatatacatctcctgattggaggcagaggct |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18986365 |
gtggttttttcagcagagttcaaataacgatcaactgcttctttaacatcagacggatcaataacttcagatatacatctcctgattggaggcagaggct |
18986266 |
T |
 |
| Q |
212 |
gcaaagcagttgacagcccttttaccggaatggattgatctggcgaggtgcatggatcagagacacagcggctaagagcattcccgcggagactgaaagg |
311 |
Q |
| |
|
|||||||||||||| ||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
18986265 |
gcaaagcagttgacggcccttttaccggcatggattgatccggcaaggtgcatggatcagagacacagcggctaagagtattcccacggagactgaaaga |
18986166 |
T |
 |
| Q |
312 |
aagtgtaatggcagagaagccattacgggtgagattgcttgcgtcaaaagaatgcttcttgagtgatggttggtgagca |
390 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
18986165 |
aagtgtaatggcggagaagccattacgggtgagattgcttgcgtcaaaagaatgcttcttggatgacggttggtgagca |
18986087 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 13 - 387
Target Start/End: Complemental strand, 27482504 - 27482129
Alignment:
| Q |
13 |
acaaataacaaacaaaacccattattccaaatcnnnnnnn-gattacttttttagcaagaaacacaagtttcaacacataccattgaatcagattcaggg |
111 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27482504 |
acaaaaaacaaacaaaacccattattccaaattaaaaaaaagattacttttttagcaagaaacacaagtttcaacacataccattgaatcagattcaggg |
27482405 |
T |
 |
| Q |
112 |
gtggttttttcagcagagttcaaataacgagcaactgcttctttaacctcagaaggatcaataacttcagatatacatctcctgattggaggcagaggct |
211 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
27482404 |
gtggttttttcagcacagttcaaataacgagctactgcttctttaacctcagtaggatcgataacttcagatatacatctgctgatcggaggcagaggct |
27482305 |
T |
 |
| Q |
212 |
gcaaagcagttgacagcccttttaccggaatggattgatctggcgaggtgcatggatcagagacacagcggctaagagcattcccgcggagactgaaagg |
311 |
Q |
| |
|
|||||||||||||| |||||||||| || ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27482304 |
gcaaagcagttgacggcccttttactggcatggattgatccggaaaggtgcatggatcagagacacagcggctaagagcattcccgcggagactgaaagg |
27482205 |
T |
 |
| Q |
312 |
aagtgtaatggcagagaagccattacgggtgagattgcttgcgtcaaaagaatgcttcttgagtgatggttggtga |
387 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
27482204 |
aattgtaatggcagagaagccattacgggtgagattgcttgcgtcaaaagaatgcttcttggatgatggttggtga |
27482129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 53 - 388
Target Start/End: Complemental strand, 25518808 - 25518473
Alignment:
| Q |
53 |
gattacttttttagcaagaaacacaagtttcaacacataccattgaatcagattcaggggtggttttttcagcagagttcaaataacgagcaactgcttc |
152 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
25518808 |
gattacttttttagcaagaaacacaagtttcaacacataccattgaatcagattcaggggtggttttttcagcagagttcaaataacaagcaactgcttc |
25518709 |
T |
 |
| Q |
153 |
tttaacctcagaaggatcaataacttcagatatacatctcctgattggaggcagaggctgcaaagcagttgacagcccttttaccggaatggattgatct |
252 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||| |||||| ||||| || | |||||| |
|
|
| T |
25518708 |
tttaacctccaaaggatcaataacttcagatatacatctcctgatcggaggcagaggcggcaaagcagtcgacgaccctttaaccggcatagcttgatcc |
25518609 |
T |
 |
| Q |
253 |
ggcgaggtgcatggatcagagacacagcggctaagagcattcccgcggagactgaaaggaagtgtaatggcagagaagccattacgggtgagattgcttg |
352 |
Q |
| |
|
||| ||||||||||||||| |||||||| || ||||||||| || || ||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
25518608 |
ggcaaggtgcatggatcagcgacacagcagcgaagagcattaccacgaagactgaaaggaagtgtaatggcggagaagccattacgggtgagattgcttg |
25518509 |
T |
 |
| Q |
353 |
cgtcaaaagaatgcttcttgagtgatggttggtgag |
388 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||| |
|
|
| T |
25518508 |
cgtcgaaagaatgcttcttggatgatggttggtgag |
25518473 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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