View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14376_low_30 (Length: 395)
Name: NF14376_low_30
Description: NF14376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14376_low_30 |
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Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 143 - 379
Target Start/End: Original strand, 32776815 - 32777051
Alignment:
| Q |
143 |
acacgagaggggcgattcccctctttatttatatccctcttacagttttaaatgagttatcagcgcacacaaatattttttcatataaaaatataaagga |
242 |
Q |
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| T |
32776815 |
acacgagaggggtgattcccctctttatttatatccctcttacagttttaaatgagttatcagcgcacacaaatattttttcatataaaaatataaagga |
32776914 |
T |
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| Q |
243 |
aggtaatatattaaacttctaaaaccccaactcacacttggaaaagtgaacatttgatgtatatacttgcaaacaaaagaaagatatacactattaatta |
342 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
32776915 |
aggtaatatattaaacttctaaaaccccaactcacacttggaaaagtgaacatttgatgtatatacttgcaaacaacagaaagatatacactattaatta |
32777014 |
T |
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| Q |
343 |
acttgacaatatgaaatgaaatgatggtggcttaatg |
379 |
Q |
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| T |
32777015 |
acttgacaatatgaaatgaaatgatggtggcttaatg |
32777051 |
T |
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