View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14376_low_70 (Length: 240)

Name: NF14376_low_70
Description: NF14376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14376_low_70
NF14376_low_70
[»] chr6 (26 HSPs)
chr6 (1-213)||(21593449-21593659)
chr6 (1-214)||(5043410-5043622)
chr6 (1-213)||(603253-603465)
chr6 (13-214)||(3808893-3809094)
chr6 (12-214)||(2973122-2973325)
chr6 (1-214)||(26830297-26830510)
chr6 (1-177)||(17762807-17762985)
chr6 (1-172)||(22425000-22425170)
chr6 (8-168)||(5740970-5741131)
chr6 (83-177)||(17757902-17757998)
chr6 (1-106)||(25073457-25073563)
chr6 (1-55)||(4045364-4045418)
chr6 (1-53)||(9183204-9183255)
chr6 (29-151)||(11660452-11660574)
chr6 (1-53)||(28137581-28137632)
chr6 (1-42)||(16567160-16567201)
chr6 (1-53)||(26954458-26954509)
chr6 (1-42)||(16568997-16569038)
chr6 (1-53)||(2171704-2171754)
chr6 (1-53)||(3039076-3039127)
chr6 (1-53)||(5406372-5406422)
chr6 (1-53)||(5410697-5410747)
chr6 (1-42)||(16452503-16452543)
chr6 (1-42)||(31404847-31404887)
chr6 (1-53)||(5413566-5413616)
chr6 (5-53)||(33211362-33211409)
[»] chr3 (52 HSPs)
chr3 (2-214)||(6095773-6095985)
chr3 (1-214)||(46860253-46860469)
chr3 (17-214)||(34490995-34491193)
chr3 (1-214)||(49199643-49199857)
chr3 (1-214)||(30235907-30236120)
chr3 (1-214)||(54593487-54593699)
chr3 (5-177)||(4569769-4569943)
chr3 (1-214)||(41819696-41819907)
chr3 (1-214)||(55302138-55302351)
chr3 (15-214)||(36018633-36018833)
chr3 (21-214)||(40913120-40913315)
chr3 (1-214)||(47304034-47304246)
chr3 (1-214)||(5434051-5434264)
chr3 (1-214)||(43403918-43404119)
chr3 (1-214)||(43401975-43402176)
chr3 (43-213)||(1683270-1683440)
chr3 (1-137)||(26323247-26323385)
chr3 (1-213)||(35138879-35139091)
chr3 (12-84)||(31340384-31340456)
chr3 (39-209)||(20937444-20937613)
chr3 (2-121)||(39127421-39127541)
chr3 (45-151)||(34795713-34795819)
chr3 (1-54)||(9666640-9666693)
chr3 (1-53)||(29196560-29196612)
chr3 (1-53)||(44700651-44700703)
chr3 (1-52)||(46173311-46173361)
chr3 (1-53)||(5236629-5236680)
chr3 (1-53)||(9581227-9581278)
chr3 (1-53)||(29682303-29682354)
chr3 (1-53)||(40734442-40734493)
chr3 (1-53)||(44331489-44331540)
chr3 (1-53)||(19684062-19684113)
chr3 (1-53)||(22835175-22835226)
chr3 (1-53)||(31314389-31314440)
chr3 (1-53)||(39153534-39153585)
chr3 (2-53)||(23392083-23392133)
chr3 (2-53)||(29810812-29810862)
chr3 (1-51)||(32891049-32891098)
chr3 (1-42)||(16498984-16499025)
chr3 (1-42)||(23410502-23410543)
chr3 (1-42)||(40735337-40735378)
chr3 (1-42)||(51398768-51398809)
chr3 (1-42)||(53921676-53921717)
chr3 (1-53)||(760791-760842)
chr3 (1-53)||(5258318-5258368)
chr3 (1-53)||(5260497-5260547)
chr3 (1-53)||(23198111-23198161)
chr3 (1-53)||(23200310-23200360)
chr3 (1-53)||(45095109-45095159)
chr3 (1-42)||(7764422-7764462)
chr3 (1-42)||(9636300-9636340)
chr3 (1-53)||(2075230-2075281)
[»] chr1 (61 HSPs)
chr1 (1-177)||(11348516-11348693)
chr1 (1-214)||(34603358-34603571)
chr1 (15-214)||(7482418-7482616)
chr1 (1-214)||(37033246-37033459)
chr1 (1-214)||(42298148-42298361)
chr1 (1-177)||(13547262-13547439)
chr1 (1-177)||(13549173-13549350)
chr1 (1-214)||(29136030-29136242)
chr1 (1-214)||(37168079-37168292)
chr1 (1-214)||(37879084-37879297)
chr1 (1-214)||(28242171-28242384)
chr1 (1-177)||(47114989-47115166)
chr1 (1-177)||(193429-193606)
chr1 (46-214)||(34602557-34602725)
chr1 (1-214)||(31925880-31926092)
chr1 (1-214)||(19754273-19754489)
chr1 (1-209)||(19752472-19752680)
chr1 (1-177)||(47255513-47255689)
chr1 (1-200)||(6808242-6808441)
chr1 (1-211)||(41135605-41135815)
chr1 (7-149)||(25651931-25652075)
chr1 (39-151)||(22079166-22079278)
chr1 (40-214)||(16216709-16216880)
chr1 (1-55)||(15820249-15820302)
chr1 (1-53)||(197081-197132)
chr1 (1-53)||(928150-928202)
chr1 (43-146)||(3331403-3331505)
chr1 (1-53)||(3847294-3847345)
chr1 (1-53)||(10925167-10925218)
chr1 (1-53)||(28265727-28265778)
chr1 (1-53)||(50167348-50167399)
chr1 (1-52)||(1833467-1833517)
chr1 (1-51)||(13138147-13138196)
chr1 (1-42)||(31659192-31659233)
chr1 (1-42)||(37503727-37503768)
chr1 (1-42)||(46064872-46064913)
chr1 (1-53)||(834340-834391)
chr1 (72-147)||(12318725-12318801)
chr1 (1-53)||(44455104-44455155)
chr1 (1-53)||(50169383-50169434)
chr1 (1-42)||(4552810-4552851)
chr1 (77-117)||(6068471-6068512)
chr1 (1-42)||(8550960-8551001)
chr1 (1-42)||(13659509-13659550)
chr1 (40-152)||(33775756-33775866)
chr1 (1-54)||(44650336-44650389)
chr1 (2-42)||(28220400-28220440)
chr1 (1-53)||(28223594-28223645)
chr1 (1-37)||(49918309-49918345)
chr1 (136-215)||(4535783-4535862)
chr1 (2-53)||(23555439-23555489)
chr1 (1-52)||(40122371-40122421)
chr1 (7-53)||(30476627-30476672)
chr1 (1-42)||(37560042-37560083)
chr1 (1-42)||(45644528-45644569)
chr1 (2-50)||(1485947-1485995)
chr1 (1-53)||(3189275-3189325)
chr1 (1-53)||(3198092-3198142)
chr1 (1-53)||(3206931-3206981)
chr1 (1-33)||(16455585-16455617)
chr1 (1-53)||(20762616-20762666)
[»] chr4 (68 HSPs)
chr4 (15-214)||(379161-379360)
chr4 (16-214)||(35662224-35662421)
chr4 (1-213)||(55085537-55085750)
chr4 (1-215)||(12073174-12073387)
chr4 (1-215)||(50262871-50263085)
chr4 (12-214)||(50674029-50674232)
chr4 (1-214)||(54882802-54883015)
chr4 (5-209)||(33989649-33989853)
chr4 (1-172)||(12119362-12119533)
chr4 (1-213)||(6655739-6655951)
chr4 (1-177)||(41964233-41964410)
chr4 (1-214)||(8665189-8665403)
chr4 (1-214)||(46703283-46703495)
chr4 (1-214)||(8647920-8648134)
chr4 (40-214)||(26364047-26364222)
chr4 (1-130)||(2209578-2209708)
chr4 (100-214)||(40630766-40630879)
chr4 (1-89)||(40632353-40632440)
chr4 (1-139)||(27417138-27417273)
chr4 (1-211)||(33089683-33089873)
chr4 (53-214)||(34112393-34112555)
chr4 (39-142)||(41961264-41961368)
chr4 (13-78)||(41639345-41639410)
chr4 (1-168)||(26699618-26699786)
chr4 (51-151)||(3785934-3786034)
chr4 (1-151)||(22882924-22883077)
chr4 (1-151)||(22934588-22934741)
chr4 (1-151)||(35369614-35369763)
chr4 (1-53)||(52467527-52467579)
chr4 (1-150)||(32091324-32091473)
chr4 (1-59)||(21688186-21688243)
chr4 (43-151)||(35370553-35370661)
chr4 (1-53)||(5429623-5429674)
chr4 (1-53)||(5871764-5871815)
chr4 (1-53)||(13009604-13009655)
chr4 (1-53)||(24969055-24969107)
chr4 (1-53)||(26175809-26175860)
chr4 (1-53)||(48142986-48143037)
chr4 (1-53)||(52095535-52095586)
chr4 (1-52)||(12745609-12745659)
chr4 (1-55)||(36463562-36463615)
chr4 (4-53)||(4587902-4587950)
chr4 (1-42)||(36994478-36994519)
chr4 (1-42)||(48893815-48893856)
chr4 (1-53)||(6542354-6542405)
chr4 (1-53)||(37229895-37229947)
chr4 (102-214)||(46569821-46569932)
chr4 (1-53)||(47038582-47038633)
chr4 (1-53)||(52082830-52082881)
chr4 (1-53)||(54200079-54200130)
chr4 (1-52)||(5208015-5208066)
chr4 (1-51)||(31474096-31474145)
chr4 (1-55)||(48142551-48142605)
chr4 (4-42)||(51337018-51337056)
chr4 (1-63)||(52065530-52065592)
chr4 (1-53)||(12739723-12739774)
chr4 (1-53)||(12747929-12747980)
chr4 (1-53)||(13992459-13992509)
chr4 (5-53)||(29056301-29056349)
chr4 (1-53)||(29254438-29254489)
chr4 (1-53)||(34570587-34570638)
chr4 (13-53)||(41639207-41639247)
chr4 (1-53)||(56178810-56178860)
chr4 (1-36)||(3913408-3913443)
chr4 (27-73)||(43135583-43135630)
chr4 (7-55)||(3677403-3677451)
chr4 (1-49)||(5349853-5349901)
chr4 (1-53)||(37740570-37740620)
[»] chr5 (44 HSPs)
chr5 (1-214)||(40147043-40147256)
chr5 (12-214)||(38746787-38746990)
chr5 (1-214)||(5057829-5058042)
chr5 (12-214)||(27015314-27015517)
chr5 (1-214)||(213251-213460)
chr5 (1-214)||(28278098-28278311)
chr5 (1-172)||(27637786-27637961)
chr5 (17-200)||(4160429-4160611)
chr5 (1-156)||(16641113-16641269)
chr5 (39-211)||(316550-316720)
chr5 (3-211)||(33906202-33906412)
chr5 (1-143)||(35616023-35616164)
chr5 (39-152)||(14689622-14689735)
chr5 (49-177)||(21205873-21206002)
chr5 (1-52)||(42926838-42926888)
chr5 (1-42)||(8566119-8566160)
chr5 (1-42)||(42428603-42428644)
chr5 (1-53)||(533713-533764)
chr5 (1-53)||(5887589-5887640)
chr5 (1-53)||(28750828-28750879)
chr5 (1-53)||(31182917-31182968)
chr5 (2-42)||(32636778-32636818)
chr5 (2-42)||(33831634-33831674)
chr5 (1-53)||(39468722-39468773)
chr5 (26-119)||(8019464-8019557)
chr5 (1-52)||(42426408-42426458)
chr5 (1-42)||(13488157-13488198)
chr5 (1-53)||(13239696-13239746)
chr5 (1-53)||(13343005-13343055)
chr5 (1-53)||(19806328-19806378)
chr5 (1-53)||(25412706-25412756)
chr5 (1-53)||(36074218-36074268)
chr5 (1-52)||(537970-538020)
chr5 (1-52)||(9049514-9049565)
chr5 (7-124)||(10700827-10700945)
chr5 (154-213)||(30802723-30802782)
chr5 (3-53)||(3075833-3075882)
chr5 (1-63)||(32576471-32576533)
chr5 (2-47)||(13695865-13695910)
chr5 (1-42)||(30683094-30683134)
chr5 (1-53)||(16409427-16409477)
chr5 (1-53)||(26170726-26170776)
chr5 (1-53)||(26177835-26177885)
chr5 (1-53)||(30182533-30182583)
[»] chr2 (40 HSPs)
chr2 (1-214)||(1631905-1632118)
chr2 (1-214)||(35447057-35447270)
chr2 (2-213)||(45726712-45726923)
chr2 (13-214)||(42288294-42288495)
chr2 (1-214)||(24397839-24398050)
chr2 (1-158)||(17450428-17450586)
chr2 (1-214)||(33647951-33648165)
chr2 (43-204)||(30218250-30218410)
chr2 (49-151)||(43730992-43731093)
chr2 (1-53)||(723917-723968)
chr2 (1-53)||(11049493-11049545)
chr2 (1-53)||(11690445-11690496)
chr2 (1-53)||(13121712-13121764)
chr2 (1-53)||(14633999-14634050)
chr2 (1-53)||(24885605-24885656)
chr2 (1-53)||(29867813-29867864)
chr2 (1-53)||(34139944-34139995)
chr2 (1-53)||(36773506-36773557)
chr2 (1-53)||(42362296-42362347)
chr2 (2-53)||(11067249-11067299)
chr2 (1-42)||(17057542-17057583)
chr2 (1-42)||(17085525-17085566)
chr2 (1-42)||(36318182-36318223)
chr2 (43-211)||(42261826-42261993)
chr2 (137-177)||(7451118-7451158)
chr2 (1-53)||(11151764-11151815)
chr2 (1-53)||(39284829-39284880)
chr2 (1-55)||(33162623-33162676)
chr2 (1-53)||(2334591-2334641)
chr2 (1-53)||(4503306-4503356)
chr2 (1-53)||(5723428-5723478)
chr2 (1-53)||(12123757-12123809)
chr2 (5-53)||(14202584-14202631)
chr2 (1-53)||(38312184-38312235)
chr2 (1-53)||(45099699-45099749)
chr2 (1-53)||(4484504-4484554)
chr2 (1-53)||(5700295-5700347)
chr2 (1-53)||(7815446-7815498)
chr2 (1-53)||(36205837-36205887)
chr2 (1-53)||(36988249-36988299)
[»] chr7 (58 HSPs)
chr7 (1-213)||(6431754-6431966)
chr7 (12-214)||(2390064-2390267)
chr7 (1-214)||(2361145-2361357)
chr7 (12-213)||(4512573-4512775)
chr7 (1-214)||(34310889-34311102)
chr7 (1-213)||(4508879-4509091)
chr7 (1-214)||(3258778-3258990)
chr7 (12-214)||(48599517-48599720)
chr7 (12-213)||(4510731-4510933)
chr7 (12-173)||(6360095-6360258)
chr7 (1-213)||(8359490-8359703)
chr7 (1-214)||(22328570-22328785)
chr7 (1-177)||(29608554-29608732)
chr7 (1-172)||(22269796-22269968)
chr7 (1-53)||(36146581-36146633)
chr7 (1-151)||(1360326-1360478)
chr7 (91-204)||(5116426-5116539)
chr7 (1-53)||(4538713-4538764)
chr7 (1-53)||(24526070-24526121)
chr7 (1-53)||(31733142-31733193)
chr7 (1-53)||(43864188-43864239)
chr7 (1-42)||(14070006-14070047)
chr7 (1-42)||(14380034-14380075)
chr7 (1-42)||(31105566-31105607)
chr7 (1-42)||(47674116-47674157)
chr7 (1-53)||(1113601-1113652)
chr7 (1-53)||(4586105-4586156)
chr7 (1-53)||(8153286-8153337)
chr7 (1-53)||(12098032-12098083)
chr7 (26-151)||(23794024-23794149)
chr7 (1-53)||(27347761-27347812)
chr7 (1-41)||(30024905-30024945)
chr7 (1-53)||(38671395-38671446)
chr7 (1-53)||(41649183-41649234)
chr7 (1-53)||(47676309-47676360)
chr7 (1-53)||(48491523-48491574)
chr7 (1-55)||(23554982-23555034)
chr7 (96-150)||(43363683-43363737)
chr7 (1-42)||(25615817-25615858)
chr7 (1-53)||(2761475-2761526)
chr7 (1-53)||(4178719-4178769)
chr7 (1-53)||(4253702-4253754)
chr7 (1-53)||(5514182-5514234)
chr7 (5-53)||(18126588-18126635)
chr7 (1-53)||(24514934-24514984)
chr7 (1-53)||(29990999-29991049)
chr7 (1-53)||(35853859-35853909)
chr7 (1-53)||(39731321-39731371)
chr7 (1-53)||(41317607-41317658)
chr7 (1-53)||(48408747-48408797)
chr7 (1-53)||(48489375-48489426)
chr7 (1-52)||(25767131-25767180)
chr7 (1-52)||(26417261-26417311)
chr7 (1-39)||(31518752-31518790)
chr7 (39-117)||(37545121-37545199)
chr7 (1-53)||(19502122-19502172)
chr7 (91-151)||(22552697-22552757)
chr7 (1-53)||(36574688-36574740)
[»] scaffold0466 (1 HSPs)
scaffold0466 (1-214)||(7110-7322)
[»] chr8 (46 HSPs)
chr8 (1-210)||(40221531-40221740)
chr8 (1-214)||(11383768-11383981)
chr8 (12-214)||(40328561-40328764)
chr8 (1-211)||(44353577-44353788)
chr8 (1-177)||(4283342-4283519)
chr8 (1-214)||(42435164-42435377)
chr8 (12-150)||(18655246-18655385)
chr8 (51-200)||(40585521-40585669)
chr8 (1-53)||(18141764-18141816)
chr8 (1-151)||(33655477-33655628)
chr8 (1-51)||(8965864-8965914)
chr8 (1-53)||(4731602-4731653)
chr8 (106-194)||(9633816-9633904)
chr8 (1-53)||(30291549-30291601)
chr8 (1-53)||(41365020-41365071)
chr8 (1-53)||(43036367-43036418)
chr8 (1-52)||(41366787-41366837)
chr8 (1-55)||(5689213-5689266)
chr8 (39-151)||(10240004-10240113)
chr8 (1-54)||(10930372-10930424)
chr8 (1-42)||(27811232-27811273)
chr8 (1-53)||(4743376-4743427)
chr8 (43-150)||(10020292-10020398)
chr8 (1-53)||(15212730-15212781)
chr8 (1-53)||(33352094-33352145)
chr8 (1-55)||(1345544-1345597)
chr8 (27-151)||(10101351-10101475)
chr8 (1-55)||(40321022-40321075)
chr8 (1-42)||(4162454-4162495)
chr8 (1-53)||(1746392-1746442)
chr8 (1-53)||(3303843-3303894)
chr8 (1-53)||(6598916-6598967)
chr8 (1-53)||(6674369-6674420)
chr8 (5-53)||(8153705-8153753)
chr8 (147-203)||(11136933-11136989)
chr8 (1-53)||(17982597-17982647)
chr8 (1-53)||(18106251-18106302)
chr8 (1-53)||(31218201-31218251)
chr8 (1-53)||(44303798-44303848)
chr8 (91-214)||(3846083-3846205)
chr8 (1-42)||(10929753-10929794)
chr8 (1-42)||(19945534-19945574)
chr8 (1-42)||(34254503-34254543)
chr8 (1-53)||(1292636-1292687)
chr8 (1-53)||(12702812-12702862)
chr8 (1-41)||(42498149-42498188)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-214)||(80456-80669)
[»] scaffold0176 (1 HSPs)
scaffold0176 (12-214)||(18186-18387)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-213)||(11341-11552)
[»] scaffold0197 (1 HSPs)
scaffold0197 (23-150)||(1591-1729)
[»] scaffold0002 (1 HSPs)
scaffold0002 (43-211)||(490661-490828)
[»] scaffold0053 (1 HSPs)
scaffold0053 (7-63)||(24986-25041)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-42)||(149270-149311)
[»] scaffold1519 (1 HSPs)
scaffold1519 (1-53)||(861-911)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-53)||(114547-114597)
[»] scaffold0129 (1 HSPs)
scaffold0129 (6-53)||(19117-19163)
[»] scaffold0066 (1 HSPs)
scaffold0066 (7-42)||(20594-20629)
[»] scaffold0491 (1 HSPs)
scaffold0491 (1-53)||(11335-11385)


Alignment Details
Target: chr6 (Bit Score: 153; Significance: 3e-81; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 21593659 - 21593449
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagctttgatttc 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  21593659 caagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagctttgatttc 21593561  T
Q  101 ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaag 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||| |  || ||||| || |||||||    
T  21593560 ctaaggatcttctcttttggtttcacaagactcacccaagttgctcaaaaatgactctccactcatgtgttttccaaccccatgaatct-tctccaaaag 21593462  T
Q  201 gcacgaacccttt 213  Q
    |||| ||||||||    
T  21593461 gcaccaacccttt 21593449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 5043622 - 5043410
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||     
T  5043622 caagacactca-tgattttcactctcacaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaactcttagcctttgattc 5043524  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||||||||| |||| |  || ||  ||| ||||||    
T  5043523 cactaaggatcttctcttttggtttcacaagactcacccaaattgctcacaaaagactctccactcatgtgtttcccaaccccatgaa--tcttcccaaa 5043426  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  5043425 aggcaccaaccctttt 5043410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 603253 - 603465
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||| |||||||||    
T  603253 caagacactca-tgattttcactatcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaaccattagcctttgattt 603351  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||||||||| |||| |  || ||||| || |||||    
T  603352 cactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaggacactccactcatgtgtttcccaaccccatgaatct-tctccaaa 603450  T
Q  199 aggcacgaacccttt 213  Q
    |||||| ||||||||    
T  603451 aggcaccaacccttt 603465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 13 - 214
Target Start/End: Original strand, 3808893 - 3809094
Alignment:
Q  13 tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttc-ctaaggatct 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||| |||||||||| |||||||| |    
T  3808893 tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaa-agaaccaacccttagcctttgatttcactaaggattt 3808991  T
Q  111 tctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaaccc 210  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||| |||| |  || ||||| || |||||||| || |||||    
T  3808992 tctcttttggttttacaagactcacccaagttgctcacaaatgactctccactcatgtgtttcccaaccccatgaatct-tctccaaaaggaaccaaccc 3809090  T
Q  211 tttt 214  Q
    ||||    
T  3809091 tttt 3809094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 12 - 214
Target Start/End: Original strand, 2973122 - 2973325
Alignment:
Q  12 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttc-ctaaggatc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||| ||||| |||||||||| |||||||||    
T  2973122 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaatccctaaaagagaaccaacccttagcctttgatttcactaaggatc 2973221  T
Q  110 ttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaacc 209  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||  || |||||||||| |||| |  || ||||| |||| |||| |||| ||||    
T  2973222 ttctcttttggtttcacaagactcacccaagttgttcacaaatgactctgcattcatgtgtttcccaaccccatgaatct-tcccaaaaaagcaccaacc 2973320  T
Q  210 ctttt 214  Q
    |||||    
T  2973321 ctttt 2973325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 26830297 - 26830510
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  26830297 caagacactca-tgattttcactctcccaaggtgtttacaattgttttccaactctagaatctaacccccaaaagagaaccaacccttagcctttgattt 26830395  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||  | ||||| ||||| |||| |  || ||||| || |||||    
T  26830396 cactaagaatcttctcttttggtttcacaagactcgcccaagttgctcacaaatgactctgcgctcatctgtttcccaaccccatgaatct-tctccaaa 26830494  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||| ||||    
T  26830495 aggcaccaaccttttt 26830510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 17762985 - 17762807
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    |||||||||||   |||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  17762985 caagacactcatgaattttcactctctcaaagtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgattt 17762886  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaa 177  Q
    | |||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||| |||||||||||||| ||||    
T  17762885 cactaaggatcttctctttttgtttcacaagactcacccaagttgctcccaaaagactctccactcatgtgtttcccaa 17762807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 22425000 - 22425170
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagctttgatttc 100  Q
    |||||||||||   |||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||    
T  22425000 caagacactcatgaattttcactctcccaaagtgtttacaattgtttcccaactctataatctaacc-ccaaaagagaaccaacccttagctttgatttc 22425098  T
Q  101 ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttt 172  Q
    |||||||| ||||||||||||||||||||| | ||| |||||||||  |||||||||  ||| |||||||||    
T  22425099 ctaaggatattctcttttggtttcacaagactaaccgaagttgctcttaaatgactcttcacccatgtgttt 22425170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 5740970 - 5741131
Alignment:
Q  8 ctcaatgattttcactctcccaaggtgtttac-aattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttcctaag 105  Q
    ||||||||||| ||||| || ||||||||| | |||||||| |||||| |||||||||||| || |||   ||||||| |||||| |||||||| |||||    
T  5740970 ctcaatgattt-cactcaccgaaggtgttttccaattgttttccaactttagaatctaaccccccaaaagtaaccaacccttagcctttgatttactaag 5741068  T
Q  106 gatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgt 168  Q
    ||||||| ||||| ||||| ||||| |||||||| ||||||||||| |||||||  |||||||    
T  5741069 gatcttcactttttgtttctcaagattcacccaaattgctcacaaaagactcccttctcatgt 5741131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 177
Target Start/End: Complemental strand, 17757998 - 17757902
Alignment:
Q  83 actcttagc-tttgatttc-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaa 177  Q
    ||||||||| ||||||||| || | ||||||||||||| ||||||||||| |||||||||||||||||||| ||||| |||||||||||||| ||||    
T  17757998 actcttagcctttgatttcactgatgatcttctctttttgtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaa 17757902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 25073563 - 25073457
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttac-aattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatt 98  Q
    ||||| |||||||||||| ||||| |||||| ||||| | |||||||||||||||||||||||||||| ||||||||||| |||| ||||| |||| |||    
T  25073563 caagatactcaatgattt-cactcacccaagatgtttcccaattgtttcccaactctagaatctaacccccaaaagagaatcaacccttagcctttaatt 25073465  T
Q  99 tcctaagg 106  Q
    ||||||||    
T  25073464 tcctaagg 25073457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4045418 - 4045364
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactc 55  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||||||||||    
T  4045418 caagacactcaatgattttcactcaccctaggtgtttacaaatgtttcccaactc 4045364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9183204 - 9183255
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  9183204 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 9183255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 11660574 - 11660452
Alignment:
Q  29 aaggtgtttacaa-ttgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttcctaaggatcttctcttttggtttcac 126  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||||  |||||||| ||||| |||||| |||||| || | | |||||||||| || |    
T  11660574 aaggtgtttacaaattgtttccgaactctagaatctaacc-ccaaaa-tgaaccaacccttagcctttgaattcctatggttatcctcttttggtctccc 11660477  T
Q  127 aagagtcacccaagttgctcacaaa 151  Q
    |||| ||| |||| |||||||||||    
T  11660476 aagattcatccaaattgctcacaaa 11660452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28137581 - 28137632
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  28137581 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 28137632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16567201 - 16567160
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  16567201 caagacactcaatgattttcactcacccaaggtgtttacaat 16567160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26954458 - 26954509
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| || ||||||||||||| |||||||||||    
T  26954458 caagacactcaatgattttcactccccaaaggtgtttacaa-tgtttcccaac 26954509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16569038 - 16568997
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  16569038 caagacactcaatgattttcacttacccaaggtgtttacaat 16568997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2171704 - 2171754
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  2171704 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 2171754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3039076 - 3039127
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||| |||||||||||||||| | |||||||||||||| |||||||||||    
T  3039076 caagacattcaatgattttcactcactcaaggtgtttacaa-tgtttcccaac 3039127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5406372 - 5406422
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  5406372 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 5406422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5410697 - 5410747
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  5410697 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 5410747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16452503 - 16452543
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  16452503 caagacactcaatgattttcactc-accaaggtgtttacaat 16452543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31404847 - 31404887
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  31404847 caagacactcaatgattttcactc-accaaggtgtttacaat 31404887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5413566 - 5413616
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  |||| |||||||||| |||||||||||    
T  5413566 caagacactcaatgattttcactc-accaatgtgtttacaa-tgtttcccaac 5413616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 33211362 - 33211409
Alignment:
Q  5 acactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||| |  |||||||||||||||| |||||||||||    
T  33211362 acactcaatgattttcagtgacccaaggtgtttacaa-tgtttcccaac 33211409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 139; Significance: 7e-73; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 6095773 - 6095985
Alignment:
Q  2 aagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttc 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||| |||||||||    
T  6095773 aagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacctttagcatttgatttc 6095871  T
Q  101 -ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaa 199  Q
     |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| |  || ||||| |||||||||    
T  6095872 actaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttcccaaccccatgaatct-tccccaaaa 6095970  T
Q  200 ggcacgaaccctttt 214  Q
    ||||| |||||||||    
T  6095971 ggcaccaaccctttt 6095985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 46860469 - 46860253
Alignment:
Q  1 caagacactcaatga-ttttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaac--tcttag-ctttga 96  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||  |||||| ||||||    
T  46860469 caagacactcattgaattttcactctcccaaggtgtttacaattgtttctcaactctagaatctaacccccaaaagagaaccaaccctcttagtctttga 46860370  T
Q  97 tttcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctcccca 196  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||  |  || ||||| ||||||    
T  46860369 tttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttcccatccctatgaatct-tcccca 46860271  T
Q  197 aaaggcacgaaccctttt 214  Q
    |||||||| |||||||||    
T  46860270 aaaggcaccaaccctttt 46860253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 34491193 - 34490995
Alignment:
Q  17 tttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttc-ctaaggatcttctc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||    
T  34491193 tttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctc 34491094  T
Q  115 ttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaaccctttt 214  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||    || ||||| || ||||||||||| |||||||||    
T  34491093 ttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttttcaactccatgaatct-tctccaaaaggcaccaaccctttt 34490995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 49199643 - 49199857
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||| |||||||||    
T  49199643 caagacactca-tgattttcactctcccaaagtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaaccattagcctttgattt 49199741  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtc-acccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaa 197  Q
    | |||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||| ||||| |||| |  || ||||| |||||||    
T  49199742 cactaaggatcttctcttttggtttcacaagactcaacccaagttgctcacaaaagactctccactcatatgtttcccaaccccatgaatct-tccccaa 49199840  T
Q  198 aaggcacgaaccctttt 214  Q
    ||||||| |||||||||    
T  49199841 aaggcaccaaccctttt 49199857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 30236120 - 30235907
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||   |||| ||| |||||    
T  30236120 caagacactca-tgattttcactatcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaatcattagccttcgattt 30236022  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| |||||||||||| |  || ||| | ||||||||    
T  30236021 cactaaggatcttctcttttggtttcacaagactcacccaacttgctcacaaatgactctccactcttgtgttttccaaccccatgaatat-tccccaaa 30235923  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  30235922 aggcaccaaccctttt 30235907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 54593699 - 54593487
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||| |||||||||    
T  54593699 caagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaa-caacccttagcctttgattt 54593602  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | ||||||||||||| |||||||||||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||  |  || ||||| ||||||||    
T  54593601 cactaaggatcttctattttggtttcacaagactcactcaagttgctcacaaaagactctccactcatgtgttttccatccccatgaatct-tccccaaa 54593503  T
Q  199 aggcacgaaccctttt 214  Q
    ||| || |||||||||    
T  54593502 aggtaccaaccctttt 54593487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 4569943 - 4569769
Alignment:
Q  5 acactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttc-ct 102  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| |||||||||| ||    
T  4569943 acactcaatgattttcactcacccaaggtgtttacaattgttttccaactctagaatctaaccaccaaaagagaaccaacccttagcctttgatttcact 4569844  T
Q  103 aaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaa 177  Q
    || |||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| ||||    
T  4569843 aaagatcatctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaa 4569769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 41819696 - 41819907
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagctttgatttc 100  Q
    |||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||    
T  41819696 caagacactcatgaattttcactctcccaaggtgtttacaattatttcccaactctagaatctaaccgctaaaagagaaccaacccttagctttgatttc 41819795  T
Q  101 ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaag 200  Q
     ||| |||||||||||||||||||| |||| |||| |||||||||||||||||| || |||||||||||||| |||| |  || ||  ||| ||||||||    
T  41819796 ataaagatcttctcttttggtttcataagactcactcaagttgctcacaaatgagtctccactcatgtgtttcccaaccccatgaa--tcttcccaaaag 41819893  T
Q  201 gcacgaaccctttt 214  Q
    |||| |||||||||    
T  41819894 gcaccaaccctttt 41819907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 55302138 - 55302351
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||| | ||| |||||||||    
T  55302138 caagacactca-tgattttcactctcccaaggtatttacaattgtttcccaactctataatctaacctacaaaagagaaccaacccctagcctttgattt 55302236  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||| |||| ||||||||||||||| || || ||||||||||||||||||| |  || ||| | | ||||||    
T  55302237 cactaaggatcttctcttttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaacctcatgaat-ttttcccaaa 55302335  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  55302336 aggcaccaaccctttt 55302351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 15 - 214
Target Start/End: Complemental strand, 36018833 - 36018633
Alignment:
Q  15 attttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttc-ctaaggatcttc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||  | ||| |||||||||| ||||||||||||    
T  36018833 attttcactctcccaaggtgtttacaattgtttcccaactctagaatctaaaccccaaaagagaaccaatccatagcctttgatttcactaaggatcttc 36018734  T
Q  113 tcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaaccctt 212  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| |||  |  ||  |||| |||||||||||||| |||||||    
T  36018733 tcttttggtttcacaagactcacccaagttgctcacaaatgactctccattcatgtgtttcccatccccatggatct-tccccaaaaggcaccaaccctt 36018635  T
Q  213 tt 214  Q
    ||    
T  36018634 tt 36018633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 21 - 214
Target Start/End: Complemental strand, 40913315 - 40913120
Alignment:
Q  21 actctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactctt-agctttgatttc-ctaaggatcttctctttt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| | |||| ||||| ||||||||||||||||||    
T  40913315 actctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttaacctttaatttcactaaggatcttctctttt 40913216  T
Q  119 ggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaaccctttt 214  Q
    | |||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||| |  || |||||   || ||||||||| |||||||||    
T  40913215 gctttcacaagactcacccaatttgctcacaaatgactctccactcatgtgtttcccaaccccatgaatcttctccaaaaaggcaccaaccctttt 40913120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 47304246 - 47304034
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||| |||||||||||||||| |||||  ||||||||    
T  47304246 caagacactca-tgattttcactctcccagggtgtttaaaattgttttccaactctagaatctaacccccaaaagagaaccaacccttagtttttgattt 47304148  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||| |||||||||||||| |||||| ||||| ||||||||||||||  |||| |||||||||||||| |||| |  || ||||| ||||||||    
T  47304147 cactaaggatattctcttttggttttacaagactcacctaagttgctcacaaa-aactctccactcatgtgtttcccaaccccatgaatct-tccccaaa 47304050  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  47304049 aggcaccaaccctttt 47304034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 5434051 - 5434264
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||   |||| ||||||||     
T  5434051 caagacactcaatgattttcactcacc-aaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaatcaatctttagtctttgatta 5434149  T
Q  100 cctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaa 199  Q
    | ||||||||||||||||||||||| ||||| |||||||| ||||||||||| ||||| |||||||||||||| | || |  || |||||||||| ||||    
T  5434150 cataaggatcttctcttttggtttcccaagactcacccaacttgctcacaaaagactctccactcatgtgtttcctaaccccatgaatctctccctaaaa 5434249  T
Q  200 ggcacgaaccctttt 214  Q
      ||| |||||||||    
T  5434250 aacactaaccctttt 5434264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 43403918 - 43404119
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgattt 99  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||            |||||||||||| | |||| ||||||||    
T  43403918 caagacactca-tgattttcactctcccaaagtgtttacaattgtttcccaactttagaa------------aagagaaccaacccatagcctttgattt 43404004  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||| |  || ||||| ||||||||    
T  43404005 cactaaggatcttctcttttagtttcacaagactcacccaagttgctcccaaatgactctccactcatgtgttttccaaccccatgaatct-tccccaaa 43404103  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  43404104 aggcaccaaccctttt 43404119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 43401975 - 43402176
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgattt 99  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||            |||||||||||| | |||| ||||||||    
T  43401975 caagacactca-tgattttcactctcccaaggtgtttacaatcgtttcccaactctagaa------------aagagaaccaacccatagcctttgattt 43402061  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||| | |||||||||| |||||||||| || |||||||||||||| |||| |  || ||||| ||||||||    
T  43402062 cactaaggatcttctcttttggtttcacaagacttacccaagttgttcacaaatgattctccactcatgtgtttcccaaccccatgaatct-tccccaaa 43402160  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  43402161 aggcaccaaccctttt 43402176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 1683440 - 1683270
Alignment:
Q  43 tgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttcctaaggatcttctcttttggtttcacaagagtcacccaagt 141  Q
    ||||||||||||||||| ||||||| |||||||| ||||||| |||||| |||||||| ||||||||||||||||||||| |||||||| ||||| ||||    
T  1683440 tgtttcccaactctagattctaacc-ccaaaagataaccaacccttagcctttgattttctaaggatcttctcttttggtctcacaagactcaccaaagt 1683342  T
Q  142 tgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaacccttt 213  Q
    |||||| |||||| |  ||||||||||||||||||| |  || ||||||| ||||||| |||| ||||||||    
T  1683341 tgctcataaatgattatccactcatgtgttttccaaccccatgaatctcttcccaaaatgcaccaacccttt 1683270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 26323247 - 26323385
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttac-aattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatt 98  Q
    ||||||||| |||||| ||||||| | |||||||||| | |||||||||||||||||| |||||||||  ||||||||||||||| |||||| |||||||    
T  26323247 caagacacttaatgatgttcactcactcaaggtgtttcccaattgtttcccaactctaaaatctaaccctcaaaagagaaccaacccttagcttttgatt 26323346  T
Q  99 tcctaaggatcttctcttttggtttcacaagagtcaccc 137  Q
    |||||||||| |||| ||||||| || ||||| ||||||    
T  26323347 tcctaaggatattcttttttggtctcccaagactcaccc 26323385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 35138879 - 35139091
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgttt-acaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc--tttgat 97  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||| ||||| |||||||||||  ||| ||||||  ||| ||    
T  35138879 caagacactcaatgattttcactctcccaaggtgtttcacaattgttt-ccaactttaaaatttaacc-ccaaaagagaattaacccttagcttttttat 35138976  T
Q  98 ttcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaa 197  Q
    |||||||||||||||| ||||||| || ||||| |||  ||||||||||| ||| ||||| |   | || |||||||||| |  || ||||||||| |||    
T  35138977 ttcctaaggatcttctattttggtctcccaagactcattcaagttgctcataaa-gactctcatttgatttgttttccaacctcatgaatctctcctcaa 35139075  T
Q  198 aaggcacgaacccttt 213  Q
    ||||||  ||||||||    
T  35139076 aaggcatcaacccttt 35139091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 31340384 - 31340456
Alignment:
Q  12 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaac 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||    
T  31340384 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccctaaaagggcaccaac 31340456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 20937613 - 20937444
Alignment:
Q  39 caattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttcctaaggatcttctcttttggtttcacaagagtcaccc 137  Q
    ||||| |||| |||||||||||||||  | ||||||||||||||||  ||| | |||||||||||||| ||||||||||||||| || ||||| ||||||    
T  20937613 caattatttctcaactctagaatctactc-ccaaaagagaaccaacctttatcctttgatttcctaagaatcttctcttttggtctcccaagaatcaccc 20937515  T
Q  138 aagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaacc 209  Q
    |||||  ||||||| |||||||   | ||||||||| ||| || || ||||||||| |||||||||| ||||    
T  20937514 aagtttgtcacaaa-gactcccttttgatgtgtttttcaaccacatgaatctctcctcaaaaggcaccaacc 20937444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 39127541 - 39127421
Alignment:
Q  2 aagacactcaatgattttcactctcccaaggt-gtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||| |||||||||||||||||| |||||||  ||| ||||||||||| ||||||||||| |||||  ||||||||||| ||| ||||| |||||||||    
T  39127541 aagacgctcaatgattttcactcttccaaggtattttccaattgtttccaaactctagaatttaacc-acaaaagagaactaacccttagcctttgattt 39127443  T
Q  100 cctaaggatcttctcttttggt 121  Q
    ||||||| | ||||||||||||    
T  39127442 cctaagggtattctcttttggt 39127421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 34795819 - 34795713
Alignment:
Q  45 tttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttcctaaggatcttctcttttggtttcacaagagtcacccaagttg 143  Q
    |||||||||| |||||| ||||| | |||||||||||| | |||||| |||||||| ||||||||||||||||||||| || ||||| |||||||||||     
T  34795819 tttcccaactttagaatttaaccac-aaaagagaaccatcccttagcctttgattttctaaggatcttctcttttggtctcccaagactcacccaagttt 34795721  T
Q  144 ctcacaaa 151  Q
    || |||||    
T  34795720 cttacaaa 34795713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9666640 - 9666693
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaact 54  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  9666640 caagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaact 9666693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29196560 - 29196612
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  29196560 caagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaac 29196612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 44700651 - 44700703
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  44700651 caagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaac 44700703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 46173361 - 46173311
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaa 52  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  46173361 caagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaa 46173311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5236629 - 5236680
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  5236629 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 5236680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9581278 - 9581227
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  9581278 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 9581227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29682354 - 29682303
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  29682354 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 29682303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40734493 - 40734442
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  40734493 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 40734442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 44331540 - 44331489
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  44331540 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 44331489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19684062 - 19684113
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||||||    
T  19684062 caagacattcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 19684113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22835175 - 22835226
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  22835175 caagacactcaatgattttcactcacccaaggtgattacaa-tgtttcccaac 22835226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31314440 - 31314389
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  31314440 caagacactcaatgattttcactcacccaaagtgtttacaa-tgtttcccaac 31314389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39153534 - 39153585
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||| || |||||||||||||||| |||||||||||    
T  39153534 caagacactcaatgattttcattcacccaaggtgtttacaa-tgtttcccaac 39153585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 23392083 - 23392133
Alignment:
Q  2 aagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||| |||||||||||||| |||||||||||||||| |||||||||||    
T  23392083 aagacactaaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 23392133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 29810862 - 29810812
Alignment:
Q  2 aagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||    
T  29810862 aagacattcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 29810812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32891098 - 32891049
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttccca 51  Q
    ||||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  32891098 caagacactcaatgatttttactcacccaaggtgtttacaa-tgtttccca 32891049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16499025 - 16498984
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  16499025 caagacactcaatgattttcactaccccaaggtgtttacaat 16498984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23410502 - 23410543
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  23410502 caagacactcaatgattttcactcactcaaggtgtttacaat 23410543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40735378 - 40735337
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  40735378 caagacactcaatgattttcacttttccaaggtgtttacaat 40735337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 51398809 - 51398768
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  51398809 caagacactcaatgattttcactcatccaaggtgtttacaat 51398768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 53921676 - 53921717
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  53921676 caagacactcaatgattttcactcacccaaggtttttacaat 53921717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 760842 - 760791
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  |||||||||||| || |||||||||||    
T  760842 caagacactcaatgattttcactcatccaaggtgtttataa-tgtttcccaac 760791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5258318 - 5258368
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  5258318 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 5258368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5260497 - 5260547
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  5260497 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 5260547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23198111 - 23198161
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  23198111 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 23198161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23200310 - 23200360
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  23200310 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 23200360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 45095159 - 45095109
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  45095159 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 45095109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7764462 - 7764422
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  7764462 caagacactcaatgattttcactc-accaaggtgtttacaat 7764422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9636300 - 9636340
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  9636300 caagacactcaatgattttcactc-accaaggtgtttacaat 9636340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2075230 - 2075281
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||   ||||||||||| || |||||||||||    
T  2075230 caagacactcaatgattttcactc-agcaaggtgtttataaatgtttcccaac 2075281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 7e-73; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 11348693 - 11348516
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  11348693 caagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgattt 11348595  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaa 177  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  11348594 cactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgttttccaa 11348516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 34603571 - 34603358
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  34603571 caagacactcatgaattttcactttcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaacccttagcctttgattt 34603472  T
Q  100 cctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaa 199  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||   |||||||||||||||||| |  || ||||| |||||||||    
T  34603471 cctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagacttttcactcatgtgttttccaaccccatgaatct-tccccaaaa 34603373  T
Q  200 ggcacgaaccctttt 214  Q
    ||||| |||||||||    
T  34603372 ggcaccaaccctttt 34603358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 15 - 214
Target Start/End: Original strand, 7482418 - 7482616
Alignment:
Q  15 attttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagctttgatttcctaaggatcttctc 114  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  7482418 attttcactttcccaaggtgtttacaattgcttcccaactctagaatctaacccccaaaagagaaccaacccttagctttgatttcctaaggatcttctc 7482517  T
Q  115 ttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaaccctttt 214  Q
    |||| ||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||| |  || ||||| |||||||||||||| |||||||||    
T  7482518 tttttgtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaaccctttt 7482616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 37033246 - 37033459
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| | ||| |||||||||    
T  37033246 caagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaaccccaaaaagagaaccaacccatagcctttgattt 37033344  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| |  || ||||| ||| ||||    
T  37033345 cactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttcccaacctcatgaatct-tcctcaaa 37033443  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  37033444 aggcaccaaccctttt 37033459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 42298148 - 42298361
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  42298148 caagacactca-tgatttttactctcccaaggtgtttacaattgtttcacaactctagaatctaacccccaaaagagaaccaactcttagcctttgattt 42298246  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | || ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||| |||| |  || ||||| || |||||    
T  42298247 cacttaggatcttctcttttggtttcacaagactcacccaagttgctcgcaaatgactctccactcatgtgtttcccaaccccatgaatct-tctccaaa 42298345  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  42298346 aggcaccaaccctttt 42298361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 13547262 - 13547439
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||    
T  13547262 caagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaaatctagaatctaacccccaaaagagaaccaacccttagcctttgattt 13547360  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaa 177  Q
    | ||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||    
T  13547361 cactaagtatcttctcttttggtttcacaagattcacccaagttgctcacaaaagactctccactcatgtgttttccaa 13547439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 13549173 - 13549350
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||    
T  13549173 caagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaaatctagaatctaacccccaaaagagaaccaacccttagcctttgattt 13549271  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaa 177  Q
    | ||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||    
T  13549272 cactaagtatcttctcttttggtttcacaagattcacccaagttgctcacaaaagactctccactcatgtgttttccaa 13549350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 29136242 - 29136030
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||| ||||| |||||||||    
T  29136242 caagacactca-tgattttcactctcccaaggtgtttacaattgtttcacaactctagaatctaacccccaaaagagaactaacccttagcctttgattt 29136144  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||| ||||||||||||||||||||  |||| |||||||||| |||||||| |  || ||||| ||||||||    
T  29136143 cactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaaaactctccactcatgt-ttttccaaccccatgaatct-tccccaaa 29136046  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  29136045 aggcaccaaccctttt 29136030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 37168292 - 37168079
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||  |||| |||||||||    
T  37168292 caagacactca-tgattttcactctctcaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaatcaacctttagcctttgattt 37168194  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||| |  || ||||| ||||||||    
T  37168193 cactaaggatcttctcttttagtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaaa 37168095  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  37168094 aggcaccaaccctttt 37168079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 37879084 - 37879297
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||| |||||||||    
T  37879084 caagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaatccttagcctttgattt 37879182  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||| |  || ||| | ||||||||    
T  37879183 cactaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaat-tttccccaaa 37879281  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||| ||||    
T  37879282 aggcaccaaccttttt 37879297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 28242384 - 28242171
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| | ||| |||||||||    
T  28242384 caagacactcaagaattttcactctcccaaggtgtttacaattgttttccaactctagaatctaacccctaaaagagaaccaacccatagcctttgattt 28242285  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| |  || ||  ||| ||||||    
T  28242284 cactaaggatattctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttcccaaccttatgaa--tcttcccaaa 28242187  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  28242186 aggcaccaaccctttt 28242171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 47115166 - 47114989
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  47115166 caagacactca-tgattttcactctcccaagatgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgattt 47115068  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaa 177  Q
    |  ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| |||||||||| ||||    
T  47115067 cattaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccattcatgtgtttcccaa 47114989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 193606 - 193429
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  193606 caagacactca-tgattttcaccctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgattt 193508  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaa 177  Q
    | |||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||  ||| ||||||||| ||||    
T  193507 cactaaggatcttctcttttggtttcacaagactcatccaagttgctcacaaaagactcttcacacatgtgtttcccaa 193429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 46 - 214
Target Start/End: Original strand, 34602557 - 34602725
Alignment:
Q  46 ttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttcctaaggatcttctcttttggtttcacaagagtcacccaagttgc 144  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34602557 ttcccaactctagaatctaacctccaaaagagaaccaacccttagcctttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgc 34602656  T
Q  145 tcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaaccctttt 214  Q
    ||||||| ||||   |||||||||||||||||| |  || ||||| |||||||||||||| |||||||||    
T  34602657 tcacaaaagacttttcactcatgtgttttccaaccccatgaatct-tccccaaaaggcaccaaccctttt 34602725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 31925880 - 31926092
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgattt 99  Q
    ||||||||||| ||||||||||||||||||||||||||||| || |||| ||||||||||||||||| ||||||||||||||||  ||||| ||||||||    
T  31925880 caagacactca-tgattttcactctcccaaggtgtttacaactgcttcc-aactctagaatctaacccccaaaagagaaccaaccattagcctttgattt 31925977  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||  |||||||||||||||||||| || || ||||||| |||||| |||| |  || ||||| ||||||||    
T  31925978 cactaaggatcttctcttttggtttcacaagtctcacccaagttgctcacaaaagattctccactcacgtgtttcccaaacccatgaatct-tccccaaa 31926076  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  31926077 aggcaccaaccctttt 31926092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 19754489 - 19754273
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgattt 99  Q
    ||||||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||  ||| | ||||||||    
T  19754489 caagacactca-tgattttcactctctcaaggtgtttacgaatgtttcccaactctagaatctaacccccaaaagagaaccaaccattatcctttgattt 19754391  T
Q  100 cc----taaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctcccc 195  Q
    |     ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||| |  || ||||| |||||    
T  19754390 cacttataaggattttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatct-tcccc 19754292  T
Q  196 aaaaggcacgaaccctttt 214  Q
    ||||||||| |||||||||    
T  19754291 aaaaggcaccaaccctttt 19754273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 19752680 - 19752472
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||   |||| |||||||||    
T  19752680 caagacactca-tgattttcactctctcaaggtgtttacgattatttcccaactctagaatctaacccccaaaagagaaccaatcattagcctttgattt 19752582  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||| ||| | ||||||||||||||  |||| |||||||||||||| ||||   ||| ||||| ||||||||    
T  19752581 cactaaggatcttctcttttggtttcacaagactcatctaagttgctcacaaaatactctccactcatgtgtttcccaactcaatgaatct-tccccaaa 19752483  T
Q  199 aggcacgaacc 209  Q
    |||||| ||||    
T  19752482 aggcaccaacc 19752472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 47255513 - 47255689
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  47255513 caagacactca-tgattttcactctcccaaggcatttacaattatttcccaactctagaatctaacccccaaaagagaaccaacccttagtctttgattt 47255611  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaa 177  Q
    | |||||||||||||||||||||||||||||| ||| | |||||||||||||| ||||| ||| |||||||||| ||||    
T  47255612 cactaaggatcttctcttttggtttcacaagactca-ctaagttgctcacaaaagactctccaatcatgtgtttcccaa 47255689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 6808441 - 6808242
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||||| |||||||||||||||| |||||| | | |||||| ||||||||||||||||||| | |||||||||||||  |  | ||||||||     
T  6808441 caagacactcaataattttcactctcccaaagtgtttcccaatgtttctcaactctagaatctaacct-cgaaagagaaccaaccttccgtctttgatta 6808343  T
Q  100 cctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaa 199  Q
    | ||| ||||||||||||||||||  ||  | |||||| |||||||||||||||||||  || ||||||||||||||| |  || ||||||| |||||||    
T  6808342 cataatgatcttctcttttggttttccattactcaccctagttgctcacaaatgactcttcattcatgtgttttccaaccccatgaatctcttcccaaaa 6808243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 41135815 - 41135605
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgttta-caattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatt 98  Q
    ||||| |||||||||||| | ||| ||||||||||||  ||| |||||| |||||||||||||||||| |||||||||||||||  |||||| ||| |||    
T  41135815 caagagactcaatgatttcc-ctcacccaaggtgtttttcaaatgtttctcaactctagaatctaacccccaaaagagaaccaatccttagcctttaatt 41135717  T
Q  99 tcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    ||| || |||||||||||||||||||  |||| ||||||||||| |||||||| ||||| ||  | |||||||| |||| |  || |||||||||| |||    
T  41135716 tccaaatgatcttctcttttggtttcctaagactcacccaagtttctcacaaa-gactctcctttgatgtgtttcccaaccccatgaatctctccctaaa 41135618  T
Q  199 aggcacgaaccct 211  Q
    |||||| ||||||    
T  41135617 aggcaccaaccct 41135605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 7 - 149
Target Start/End: Complemental strand, 25652075 - 25651931
Alignment:
Q  7 actcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctc-caaaagagaaccaactctt-agctttgatttcctaa 104  Q
    |||||||||||||||| | |  |||||||||||||||||||||||||||||||||||| | ||  ||||||||||||| |||| |  |||||||| ||||    
T  25652075 actcaatgattttcacacacttaaggtgtttacaattgtttcccaactctagaatctaccttcataaaagagaaccaattcttaatatttgattttctaa 25651976  T
Q  105 ggatcttctcttttggtttcacaagagtcacccaagttgctcaca 149  Q
    |||||||| |||||| |||| ||||| ||||||||||||||||||    
T  25651975 ggatcttcacttttgctttcccaagattcacccaagttgctcaca 25651931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 22079278 - 22079166
Alignment:
Q  39 caattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttcctaaggatcttctcttttggtttcacaagagtcaccc 137  Q
    |||||||||| |||||||||||||||||| ||||||||||| |||  ||||| |||||||||| |||| ||||| | |||||||||  ||||| |||||     
T  22079278 caattgtttctcaactctagaatctaacccccaaaagagaa-caatccttagcctttgatttcataagcatcttatattttggtttgccaagactcacct 22079180  T
Q  138 aagttgctcacaaa 151  Q
    ||||||||||||||    
T  22079179 aagttgctcacaaa 22079166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 40 - 214
Target Start/End: Original strand, 16216709 - 16216880
Alignment:
Q  40 aattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttcctaaggatcttctcttttggtttcacaagagtcaccca 138  Q
    ||||||||| ||||||||||||||||||  | |||   ||||||||| |||| |||||||||||||||||||||||||||   ||  ||| | |||| ||    
T  16216709 aattgtttctcaactctagaatctaacc--ctaaactaaaccaactcgtagcctttgatttcctaaggatcttctcttttaagttttcaaaattcactca 16216806  T
Q  139 agttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaaccctttt 214  Q
    |||||||||| |||||||| || ||||||||||| |||| || || ||| |||  |||||| |||| |||||||||    
T  16216807 agttgctcac-aatgactctcctctcatgtgtttgccaa-cacatgaatttctatccaaaatgcaccaaccctttt 16216880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15820302 - 15820249
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactc 55  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  15820302 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaactc 15820249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 197081 - 197132
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  197081 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 197132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 928150 - 928202
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||| |||||||||||| |||||||||||||||| |||||||||||    
T  928150 caagacactcattgattttcactcacccaaggtgtttacaaatgtttcccaac 928202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 3331505 - 3331403
Alignment:
Q  43 tgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttcctaaggatcttctcttttggtttcacaagagtcacccaagt 141  Q
    |||||||||||||||||||| |||| |||||||| ||| ||| |||||| ||||||||||||||||||| ||||||||||  |  |||| ||||| ||||    
T  3331505 tgtttcccaactctagaatccaacc-ccaaaaga-aacaaacccttagcctttgatttcctaaggatctcctcttttggtaccctaagattcacctaagt 3331408  T
Q  142 tgctc 146  Q
    |||||    
T  3331407 tgctc 3331403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3847294 - 3847345
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  3847294 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 3847345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10925218 - 10925167
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  10925218 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 10925167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28265727 - 28265778
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  28265727 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 28265778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 50167348 - 50167399
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  50167348 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 50167399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 1833517 - 1833467
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaa 52  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  1833517 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaa 1833467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13138147 - 13138196
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttccca 51  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  13138147 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttccca 13138196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31659233 - 31659192
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  31659233 caagacactcaatgattttcactcacccaaggtgtttacaat 31659192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37503727 - 37503768
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  37503727 caagacactcaatgattttcactcacccaaggtgtttacaat 37503768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 46064913 - 46064872
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  46064913 caagacactcaatgattttcactcacccaaggtgtttacaat 46064872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 834340 - 834391
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||| | |||||||||||||||| |||||||||||    
T  834340 caagacactcaatgattttcacgcacccaaggtgtttacaa-tgtttcccaac 834391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 147
Target Start/End: Original strand, 12318725 - 12318801
Alignment:
Q  72 aaagagaaccaactcttagc-tttgatttcctaaggatcttctcttttggtttcacaagagtcacccaagttgctca 147  Q
    ||||||||||||| |||||| |||||||||| || ||| |||| ||||||| || ||||| ||||||||||||||||    
T  12318725 aaagagaaccaacccttagcctttgatttccaaaagattttctattttggtctcccaagactcacccaagttgctca 12318801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 44455155 - 44455104
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||| ||||||||| |||||||||||||||| |||||||||||    
T  44455155 caagacactcaatggttttcactcacccaaggtgtttacaa-tgtttcccaac 44455104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 50169383 - 50169434
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||||||||||    
T  50169383 caagacactcaatgattttcactcacccaaggtatttacaa-tgtttcccaac 50169434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4552810 - 4552851
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  4552810 caagacactcaatgattttccctcacccaaggtgtttacaat 4552851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 6068512 - 6068471
Alignment:
Q  77 gaaccaactcttagc-tttgatttcctaaggatcttctcttt 117  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  6068512 gaaccaactcttagcctttgatttcctaaggatcttctcttt 6068471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8550960 - 8551001
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  8550960 caagacactcaatgattttcactcacccaatgtgtttacaat 8551001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13659509 - 13659550
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  13659509 caagacactcaatgattttcactaccccaaggtgtttacaat 13659550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 33775866 - 33775756
Alignment:
Q  40 aattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttcctaaggatcttctcttttggtttcacaagagtcaccca 138  Q
    ||||||||||||| ||||||||||||||| |||||| |||| ||||||||| ||||||||| ||||  ||||  |||||| || || ||||| || | ||    
T  33775866 aattgtttcccaattctagaatctaacct-caaaag-gaacaaactcttagtctttgattttctaa-aatctcatcttttagtctctcaagattcgctca 33775770  T
Q  139 agttgctcacaaat 152  Q
    ||||||||||||||    
T  33775769 agttgctcacaaat 33775756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44650336 - 44650389
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaact 54  Q
    ||||||||||||| |||||||||| ||||| |||||||||| ||||| ||||||    
T  44650336 caagacactcaataattttcactcacccaaagtgtttacaaatgttttccaact 44650389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 28220400 - 28220440
Alignment:
Q  2 aagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  28220400 aagacactcaatgattttcactcacccaaggtgttttcaat 28220440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28223594 - 28223645
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||| | ||| |||||||||||    
T  28223594 caagacactcaatgattttcactcacccaaggtgtcttcaa-tgtttcccaac 28223645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 49918345 - 49918309
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgttt 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  49918345 caagacactcaatgattttcactcacccaaggtgttt 49918309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 4535783 - 4535862
Alignment:
Q  136 ccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaacccttttt 215  Q
    |||||||||||||||| ||||  ||||||||||||||| ||| |  || ||||| | |||||||| ||| ||||||||||    
T  4535783 ccaagttgctcacaaacgactatccactcatgtgtttttcaaccccatgaatctattcccaaaagacaccaacccttttt 4535862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 23555439 - 23555489
Alignment:
Q  2 aagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||| ||||||| || |||||||||||||||| |||||||||||    
T  23555439 aagacactcaataattttcattcacccaaggtgtttacaa-tgtttcccaac 23555489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 40122371 - 40122421
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaa 52  Q
    ||||||| ||||||||||| |||| |||||||||||||||| ||||||||||    
T  40122371 caagacattcaatgatttttactcacccaaggtgtttacaa-tgtttcccaa 40122421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 30476627 - 30476672
Alignment:
Q  7 actcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||| | |||||||||||||||| |||||||||||    
T  30476627 actcaatgattttcacccacccaaggtgtttacaa-tgtttcccaac 30476672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37560042 - 37560083
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| || || |||||||||||    
T  37560042 caagacactcaatgattttcactcacctaatgtgtttacaat 37560083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 45644528 - 45644569
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    ||||||||| |||||||||||||| |||||| ||||||||||    
T  45644528 caagacacttaatgattttcactcacccaagatgtttacaat 45644569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 1485947 - 1485995
Alignment:
Q  2 aagacactcaatgattttcactctcccaaggtgtttacaattgtttccc 50  Q
    |||| |||||||||||||||||| |  || |||||||||||||||||||    
T  1485947 aagatactcaatgattttcactcacttaatgtgtttacaattgtttccc 1485995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3189325 - 3189275
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||| ||||||||||||  ||||||||||||||| |||||||||||    
T  3189325 caagacactcagtgattttcactc-accaaggtgtttacaa-tgtttcccaac 3189275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3198142 - 3198092
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||| ||||||||||||  ||||||||||||||| |||||||||||    
T  3198142 caagacactcagtgattttcactc-accaaggtgtttacaa-tgtttcccaac 3198092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3206981 - 3206931
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||| ||||||||||||  ||||||||||||||| |||||||||||    
T  3206981 caagacactcagtgattttcactc-accaaggtgtttacaa-tgtttcccaac 3206931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 16455617 - 16455585
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  16455617 caagacactcaatgattttcactcacccaaggt 16455585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20762666 - 20762616
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||| ||||||||||||||||||  ||||||||||||||| |||||||||||    
T  20762666 caagatactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 20762616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 3e-69; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 15 - 214
Target Start/End: Complemental strand, 379360 - 379161
Alignment:
Q  15 attttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttcctaaggatcttct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||| ||||||||||||||||||||||    
T  379360 attttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccacaaaagagaaccaacccttagcctttgatttcctaaggatcttct 379261  T
Q  114 cttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaacccttt 213  Q
    |||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| ||  || ||||| ||||||||||||||  |||||||    
T  379260 cttttgatttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttcccattctcatgaatct-tccccaaaaggcaccgacccttt 379162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 35662421 - 35662224
Alignment:
Q  16 ttttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagctttgatttcctaaggatcttctct 115  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||    
T  35662421 ttttcacactctcaaggtgtttacaattgtttcccaactctagaatctaacacccaaaagagaaccaacccttagctttgatttcctaaggatcttctct 35662322  T
Q  116 tttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaaccctttt 214  Q
    ||||||||||||||| ||||||||||||||||||||  |||| ||| ||||||||||||||| |  || ||||| |||||||||||||| |||||||||    
T  35662321 tttggtttcacaagactcacccaagttgctcacaaagaactctccattcatgtgttttccaaccccatgaatct-tccccaaaaggcaccaaccctttt 35662224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 55085537 - 55085750
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||| ||||| |||||||||    
T  55085537 caagacagtcaatgattttcactcacccaaggtgtttacaattgtttccgaactctagaatctaacccccaaaggagaatcaacccttagcctttgattt 55085636  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||| |  || ||||| ||||||||    
T  55085637 cactaaggatcttctcttttggtttcacaagactcacacaagttgctcacaaatgactctccactcatgtgtttcccaaccccatgaatct-tccccaaa 55085735  T
Q  199 aggcacgaacccttt 213  Q
    |||||| ||||||||    
T  55085736 aggcaccaacccttt 55085750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 12073387 - 12073174
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgattt 99  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  12073387 caagacactca-tgattttcacactcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcatttgattt 12073289  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||  |||||||||||||||||| |  || ||  ||| ||||||    
T  12073288 cactaaggatcttctcttttggtttcataagactcacccaagttgctcacaaaagactcttcactcatgtgttttccaaccccatgaa--tcttcccaaa 12073191  T
Q  199 aggcacgaacccttttt 215  Q
    |||||| ||||||||||    
T  12073190 aggcaccaacccttttt 12073174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 50262871 - 50263085
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||  |||| |||||||||    
T  50262871 caagacactca-tgattttcactctcccaaggtatttacaattgtttcccaactctagaatctaacccccaaaagagaaccaaccattagcctttgattt 50262969  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||| ||||||||||||||||||||||||||||| | |||||||||||| ||||| |||||||||||||| |||| |  || ||||| ||||||||    
T  50262970 cactaagggtcttctcttttggtttcacaagagtcaccgaggttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaaa 50263068  T
Q  199 aggcacgaacccttttt 215  Q
    |||||| ||||||||||    
T  50263069 aggcaccaacccttttt 50263085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 12 - 214
Target Start/End: Original strand, 50674029 - 50674232
Alignment:
Q  12 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttc-ctaaggatc 109  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||    
T  50674029 atgattttcactctcccaaggtgtttacaattgttttccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatc 50674128  T
Q  110 ttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaacc 209  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||| |  || ||||| | |||| ||||||| ||||    
T  50674129 ttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatct-ttcccataaggcaccaacc 50674227  T
Q  210 ctttt 214  Q
    |||||    
T  50674228 ctttt 50674232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 54883015 - 54882802
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  54883015 caagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgattt 54882917  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||| ||| ||||||||||| |||||||| |||||  ||||||||||||| |||| |  || ||||| || |||||    
T  54882916 cactaaggatcttctcttttggtttcacgagactcacccaagtttctcacaaaagactctacactcatgtgtttcccaaccccatgaatct-tctccaaa 54882818  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  54882817 aggcaccaaccctttt 54882802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 209
Target Start/End: Complemental strand, 33989853 - 33989649
Alignment:
Q  5 acactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttccta 103  Q
    ||||||||| ||||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||  |||||| ||||||| ||||    
T  33989853 acactcaataatttttactcaaccaaggtgtttacagttgtttcccaactctagaatctaacctccaaaagagaacaaatccttagcctttgattaccta 33989754  T
Q  104 aggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggca 203  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||| ||||||  || ||||||| |||||||||||    
T  33989753 aggatcttctcttttggtttcaaaagactcacccaagttgctcacaaatgactctccactcatgtgtttcccaatcccatgaatctct-cccaaaaggca 33989655  T
Q  204 cgaacc 209  Q
    | ||||    
T  33989654 ccaacc 33989649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 12119533 - 12119362
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagctttgatttc 100  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| ||| ||||||    
T  12119533 caagacactcattgattttcactctcccaaggtatttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttaacttcgatttc 12119434  T
Q  101 ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttt 172  Q
     |||||||||||||||||||||||||||||  ||||||| |||||||||||||| || ||||| ||||||||    
T  12119433 ttaaggatcttctcttttggtttcacaagacacacccaaattgctcacaaatgattcaccactaatgtgttt 12119362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 6655951 - 6655739
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttga-tt 98  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||  |||| |||||| ||    
T  6655951 caagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaaccccaaaaagagaaacaacctttagcctttgattt 6655853  T
Q  99 tcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||| |  || ||||| || |||||    
T  6655852 tactaatgatcttctcttttggtttcacaagactcacccaagttgctcagaaatgactctccactcatgtgtttcccaaccccatgaatct-tctccaaa 6655754  T
Q  199 aggcacgaacccttt 213  Q
    |||||| ||||||||    
T  6655753 aggcaccaacccttt 6655739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 41964410 - 41964233
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgattt 99  Q
    |||||||||||   ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  41964410 caagacactcatgaattttcactttcccaaggtgtttacaattgtttcccaactctagaatctaacc-ccaaaagagaaccaacccttagcctttgattt 41964312  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaa 177  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | |||||||||||| ||||    
T  41964311 cactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctctactcatgtgtttcccaa 41964233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 8665403 - 8665189
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgattt 99  Q
    |||||||||||   ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| | || | ||||||||    
T  8665403 caagacactcatgaattttcactcttccaaggtgtttacaattgtttcccaactccagaatctaacccccaaaagaaaaccaacacataacctttgattt 8665304  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| ||||||| |||| |  || ||||| ||||||||    
T  8665303 cactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcctgtgtttcccaaccccatgaatct-tccccaaa 8665205  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  8665204 aggcaccaaccctttt 8665189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 46703495 - 46703283
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||| |||| |||||||||    
T  46703495 caagacactcatgaattttcactctcccaaggtgtttacaattgtttcccaacactataatctaacccccaaaagagaaccaacttttagcctttgattt 46703396  T
Q  100 cctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaa 199  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||| ||||| ||||| ||| |||||| ||| |||  |  || ||||| |||||||||    
T  46703395 cctaaggattttctcttttggtttcacaagactcacccaagttgctgacaaaagactctccattcatgt-tttcccatccccatgaatct-tccccaaaa 46703298  T
Q  200 ggcacgaaccctttt 214  Q
    ||||| |||||||||    
T  46703297 ggcaccaaccctttt 46703283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 8648134 - 8647920
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgattt 99  Q
    |||||||||||   ||||||||||| |||||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||| | || | ||||||||    
T  8648134 caagacactcatgaattttcactcttccaaggtgtttacagttgtttcctaactccagaatctaacccccaaaagagaaccaacacataacatttgattt 8648035  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| |||||| ||||||| |||| |  || ||||| ||||||||    
T  8648034 cactaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaaagactctccactcctgtgtttcccaaccccatgaatct-tccccaaa 8647936  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  8647935 aggcaccaaccctttt 8647920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 26364222 - 26364047
Alignment:
Q  40 aattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttc-ctaaggatcttctcttttggtttcacaagagtcaccc 137  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| ||||||    
T  26364222 aattgtttcccaactctaaaatctaaccaccaaaagagaaccaacccttagcatttgatttcactaaggatcttctcttttggtttcacaagactcaccc 26364123  T
Q  138 aagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaaccctttt 214  Q
    |||||||||||||||||||| |||||||||||||| |||| |  || ||||| || ||||||||| | |||||||||    
T  26364122 aagttgctcacaaatgactctccactcatgtgtttcccaaccccatgaatct-tctccaaaaggccccaaccctttt 26364047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 2209708 - 2209578
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| | ||| |||||||||    
T  2209708 caagacactca-tgattttcactctcccaaggtgtttacaattatttcccaactctagaatctaacccccaaaagagaaccaacccatagcctttgattt 2209610  T
Q  100 c-ctaaggatcttctcttttggtttcacaaga 130  Q
    | ||||||||||||||||||||||||||||||    
T  2209609 cactaaggatcttctcttttggtttcacaaga 2209578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 100 - 214
Target Start/End: Complemental strand, 40630879 - 40630766
Alignment:
Q  100 cctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaa 199  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||| |  || ||||| |||||||||    
T  40630879 cctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaaaa 40630781  T
Q  200 ggcacgaaccctttt 214  Q
    ||||| |||||||||    
T  40630780 ggcaccaaccctttt 40630766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 40632440 - 40632353
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactctta 89  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||    
T  40632440 caagacactca-tgattttcactctcccaaggtgtttacaattgtttctcaactctagaatctaacccccaaaagagaaccaaccctta 40632353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 27417138 - 27417273
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||    ||||||||||||||||  ||||| ||||||||||| |||||||||||||||| ||||| |||||||||    
T  27417138 caagacactca-tgattttcactctccc----tgtttacaattgtttcaaaactcaagaatctaacccccaaaagagaaccaacccttagtctttgattt 27417232  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaa 139  Q
    | ||||||||||||| ||||||||| |||||| ||||||||    
T  27417233 cactaaggatcttcttttttggttttacaagactcacccaa 27417273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 33089873 - 33089683
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||||||||||||||||| |||||||||||          |||||||||| ||||||||||||||||||||||||||  |||| |||||||||    
T  33089873 caagacactcaatgattttcactcttccaaggtgttt----------cccaactctataatctaacctccaaaagagaaccaacctttagcctttgattt 33089784  T
Q  100 cctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaa 199  Q
     |||||||||||||||||||           ||| ||||||||||||||||||||||| ||||||||||||||| | | |  || |||||||| ||||||    
T  33089783 tctaaggatcttctcttttg-----------gtctcccaagttgctcacaaatgactctccactcatgtgtttttcgaccccatgaatctctctccaaaa 33089695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 53 - 214
Target Start/End: Complemental strand, 34112555 - 34112393
Alignment:
Q  53 ctctagaatctaacctccaaaagagaaccaactcttagc-tttgatttcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaa 151  Q
    ||||| |||||| | ||||||||||||||||   ||||| |||||||||||||||||||||  ||||| |||  ||||| ||| |||||||||||||| |    
T  34112555 ctctataatctaccttccaaaagagaaccaaactttagcctttgatttcctaaggatcttcagttttgtttttccaagattcatccaagttgctcacaga 34112456  T
Q  152 tgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaaccctttt 214  Q
    |||||| ||||||||||||||||||| |   | || ||||||||||||||||| |||||||||    
T  34112455 tgactctccactcatgtgttttccaaccccgtgaacctctccccaaaaggcaccaaccctttt 34112393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 41961368 - 41961264
Alignment:
Q  39 caattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttcctaaggatcttctcttttggtttcacaagagtcaccc 137  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| |||||| ||||||||||||||||| |||| ||||||| || ||||| ||||||    
T  41961368 caattgtttcccaactctagaatctaaccctcaaaagagaaccaacccttagcttttgatttcctaaggatattcttttttggtctcccaagactcaccc 41961269  T
Q  138 aagtt 142  Q
    |||||    
T  41961268 aagtt 41961264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 41639410 - 41639345
Alignment:
Q  13 tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagaga 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41639410 tgattttcactctcctaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagaga 41639345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 26699618 - 26699786
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaa-ctcttagctttgattt 99  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||| | ||||||||||||| || | | ||||||||     
T  26699618 caagacattcaatgattttcactcacccaaagtgtttacaattgtttcccaactttataatctaacccctaaaagagaaccaacctttaacctttgatta 26699717  T
Q  100 cctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgt 168  Q
    | ||| |||| |||||||| ||||   |||| ||| |  ||||| |||| ||||| || ||||||||||    
T  26699718 cataaagatcatctcttttagttttctaagactcatctgagttgttcactaatgaatctccactcatgt 26699786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 151
Target Start/End: Complemental strand, 3786034 - 3785934
Alignment:
Q  51 aactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcaca 149  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| || ||||| || | ||| |||||||||    
T  3786034 aactctagaatctaccc-ccaaaagagaaccaactcttagcctttgatttcctaaggatattctcttttggtctcccaagactcgcacaatttgctcaca 3785936  T
Q  150 aa 151  Q
    ||    
T  3785935 aa 3785934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 22882924 - 22883077
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttac-aattgtttcccaactctagaatctaacctcc-aaaagagaaccaactcttagc-tttgat 97  Q
    |||| |||||||||||||||||| || ||| | |||  | |||||||| |||| |||||||||||||| || ||||||||||||||  ||| | ||||||    
T  22882924 caaggcactcaatgattttcactttctcaaagcgttacctaattgttttccaattctagaatctaaccccccaaaagagaaccaaccattatcctttgat 22883023  T
Q  98 ttcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaa 151  Q
    || ||||||||||||||||||||| ||  |||| || ||||| |||||||||||    
T  22883024 tttctaaggatcttctcttttggtctcctaagactcgcccaaattgctcacaaa 22883077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 22934588 - 22934741
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttac-aattgtttcccaactctagaatctaacctcc-aaaagagaaccaactcttagc-tttgat 97  Q
    |||| |||||||||||||||||| || ||| | |||  | |||||||| |||| |||||||||||||| || ||||||||||||||  ||| | ||||||    
T  22934588 caaggcactcaatgattttcactttctcaaagcgttacctaattgttttccaattctagaatctaaccccccaaaagagaaccaaccattatcctttgat 22934687  T
Q  98 ttcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaa 151  Q
    || ||||||||||||||||||||| ||  |||| || ||||| |||||||||||    
T  22934688 tttctaaggatcttctcttttggtctcctaagactcgcccaaattgctcacaaa 22934741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 35369614 - 35369763
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgttt-acaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatt 98  Q
    |||||||||||||||||||||||||  ||||||||||  |||||||||||||| |||| |||| |||| |||||||||||||||| ||||| |||||| |    
T  35369614 caagacactcaatgattttcactct-acaaggtgtttcccaattgtttcccaattctataatccaacc-ccaaaagagaaccaacccttagcctttga-t 35369710  T
Q  99 tcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaa 151  Q
    ||| || |||||||| ||||| | ||   ||| |||||||||||||| |||||    
T  35369711 tcccaaagatcttctattttgctatccatagactcacccaagttgcttacaaa 35369763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 52467527 - 52467579
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  52467527 caagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaac 52467579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 32091473 - 32091324
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgttta-caattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatt 98  Q
    ||||| |||||||||||| | ||| ||||| ||||||  ||||||||||| |||| |||||||| ||| |||||| ||||||||| ||| || |||||||    
T  32091473 caagagactcaatgattt-cgctcacccaatgtgtttctcaattgtttccaaactttagaatcttacc-ccaaaaaagaaccaacactttgcctttgatt 32091376  T
Q  99 tcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaa 150  Q
    |||||||||||||||| | |||| || ||| | | |||||||||| ||||||    
T  32091375 tcctaaggatcttctcctctggtctcccaaaacttacccaagttgttcacaa 32091324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 21688243 - 21688186
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctaga 59  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  21688243 caagacactca-tgattttcactcccccaaggtgtttagaattgtttcccaactctaga 21688186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 35370553 - 35370661
Alignment:
Q  43 tgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttcctaaggatcttctcttttggtttcacaagagtcacccaagt 141  Q
    |||||||||| |||| |||||||| |||||||||||||||||  ||||| |||||||||| || |||||||| ||||||| ||   ||| ||||||||||    
T  35370553 tgtttcccaattctataatctaac-tccaaaagagaaccaaccattagcctttgatttcccaaagatcttctattttggtatccatagactcacccaagt 35370651  T
Q  142 tgctcacaaa 151  Q
    |||| |||||    
T  35370652 tgcttacaaa 35370661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5429674 - 5429623
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  5429674 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 5429623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5871815 - 5871764
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  5871815 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 5871764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13009604 - 13009655
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  13009604 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 13009655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24969107 - 24969055
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  24969107 caagactctcaatgattttcactcacccaaggtgtttacaaatgtttcccaac 24969055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26175809 - 26175860
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  26175809 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 26175860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48143037 - 48142986
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  48143037 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 48142986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 52095535 - 52095586
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  52095535 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 52095586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12745609 - 12745659
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaa 52  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  12745609 caagacactcaatgattttcactcacccaaggtgtttac-attgtttcccaa 12745659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 36463562 - 36463615
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactc 55  Q
    ||||||||||||||| |||||||| |||||||||||||||| |||||||||||||    
T  36463562 caagacactcaatgaatttcactcacccaaggtgtttacaa-tgtttcccaactc 36463615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 4587950 - 4587902
Alignment:
Q  4 gacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  4587950 gacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 4587902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 36994519 - 36994478
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  36994519 caagacactcaatgattttcactcacccaaggtgtttacaat 36994478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 48893815 - 48893856
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  48893815 caagacactcaatgattttcactcacccaaggtgtttacaat 48893856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6542354 - 6542405
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  6542354 caagacactcaataattttcactcacccaaggtgtttacaa-tgtttcccaac 6542405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37229895 - 37229947
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||||| |||||    
T  37229895 caagacactcattgattttcactcacccaaggtgtttacaaatgttttccaac 37229947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 214
Target Start/End: Original strand, 46569821 - 46569932
Alignment:
Q  102 taaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaagg 201  Q
    |||||| ||||||||||||||||| |||| ||||| |||||| ||||||| ||||  |||||||| ||||| |||| |  || ||||| | |||||||||    
T  46569821 taaggaccttctcttttggtttcataagattcacctaagttgttcacaaaagactttccactcatttgtttcccaaccccatgaatct-ttcccaaaagg 46569919  T
Q  202 cacgaaccctttt 214  Q
    ||| || ||||||    
T  46569920 caccaatcctttt 46569932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 47038582 - 47038633
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| ||||||||||||| || |||||||||||    
T  47038582 caagacactcaatgattttcactcacccaaggtgtttataa-tgtttcccaac 47038633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 52082830 - 52082881
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||||||    
T  52082830 caagacagtcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 52082881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 54200079 - 54200130
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  54200079 caagacactcaatgattttcactcacccaatgtgtttacaa-tgtttcccaac 54200130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 5208015 - 5208066
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaa 52  Q
    |||| |||| |||||||||||||| |||||||||||||||| ||||||||||    
T  5208015 caagtcactaaatgattttcactcacccaaggtgtttacaaatgtttcccaa 5208066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31474145 - 31474096
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttccca 51  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||    
T  31474145 caagacactcaatgattttcactcacccaaagtgtttacaa-tgtttccca 31474096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 48142551 - 48142605
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactc 55  Q
    |||||||||||||||||||||||| ||| | ||||||| || |||||||||||||    
T  48142551 caagacactcaatgattttcactcacccgaagtgtttaaaaatgtttcccaactc 48142605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 51337056 - 51337018
Alignment:
Q  4 gacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  51337056 gacactcaatgattttcactcacccaaggtgtttacaat 51337018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 52065592 - 52065530
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatct 63  Q
    ||||| |||| ||||||||||||| ||||||| ||| |||||||||||||||| | |||||||    
T  52065592 caagagactcgatgattttcactcacccaaggggttcacaattgtttcccaacccaagaatct 52065530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12739723 - 12739774
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||| ||||| || ||||||||||||| |||||||||||    
T  12739723 caagacactcaatgatttccactcacctaaggtgtttacaa-tgtttcccaac 12739774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12747929 - 12747980
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||| ||||| || ||||||||||||| |||||||||||    
T  12747929 caagacactcaatgatttccactcacctaaggtgtttacaa-tgtttcccaac 12747980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13992459 - 13992509
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  13992459 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 13992509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 29056349 - 29056301
Alignment:
Q  5 acactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||| |||| |||||||||||| ||| |||||||||||    
T  29056349 acactcaatgatttttactcacccaaggtgtttccaaatgtttcccaac 29056301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29254489 - 29254438
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||||    
T  29254489 caagacactcaatgattttcattcacccaatgtgtttacaa-tgtttcccaac 29254438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34570587 - 34570638
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||| ||||| ||| |||||||||||    
T  34570587 caagacactcaatgattttcactcacccaagatgttttcaa-tgtttcccaac 34570638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 41639247 - 41639207
Alignment:
Q  13 tgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  41639247 tgattttcactctcctaaggtgtttacaattgttacccaac 41639207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 56178810 - 56178860
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  56178810 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 56178860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 3913443 - 3913408
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtt 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  3913443 caagacactcaatgattttcactcacccaaggtgtt 3913408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 43135583 - 43135630
Alignment:
Q  27 ccaaggtgttta-caattgtttcccaactctagaatctaacctccaaa 73  Q
    |||||||||||  ||||||||||||||||||||||||||| |||||||    
T  43135583 ccaaggtgtttctcaattgtttcccaactctagaatctaaactccaaa 43135630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 3677451 - 3677403
Alignment:
Q  7 actcaatgattttcactctcccaaggtgtttacaattgtttcccaactc 55  Q
    |||||||||||||| |||   ||||||||||| ||||||||||||||||    
T  3677451 actcaatgattttctctcatacaaggtgtttataattgtttcccaactc 3677403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5349901 - 5349853
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcc 49  Q
    |||||||||||| |||||||| ||  ||||||||||||||| |||||||    
T  5349901 caagacactcaaagattttcaatcatccaaggtgtttacaaatgtttcc 5349853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 37740620 - 37740570
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||| ||||||||||||  ||||||||||||||| |||||||||||    
T  37740620 caagacactcagtgattttcactc-accaaggtgtttacaa-tgtttcccaac 37740570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 40147256 - 40147043
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  40147256 caagacactca-tgatttccactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgattt 40147158  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||| |  || ||||| ||||||||    
T  40147157 cactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaaa 40147059  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||| ||||    
T  40147058 aggcaccaaccatttt 40147043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 12 - 214
Target Start/End: Complemental strand, 38746990 - 38746787
Alignment:
Q  12 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttc-ctaaggatc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||  ||||||||    
T  38746990 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcaataaggatc 38746891  T
Q  110 ttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaacc 209  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||| |||||| |||| |  || ||||| |||||||||||||| ||||    
T  38746890 ttctcttttggtttcacaagactcacccaagttgctcgcaaatgactctccactcacgtgtttcccaaccccatgaatct-tccccaaaaggcaccaacc 38746792  T
Q  210 ctttt 214  Q
    |||||    
T  38746791 ctttt 38746787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 5058042 - 5057829
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgattt 99  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  5058042 caagacactca-tgattttcactcttccaaggtgtttacaattgttttccaactctagaatctaacccccaaaagagaaccaacccttagcctttgattt 5057944  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
      |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||| |  || ||||| ||||||||    
T  5057943 tactaaggatcttctcttttggtttcacaagactcgcccaagttgctcacaaatgactctccactcatgtgttttccaaccccatgaatct-tccccaaa 5057845  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||| ||||    
T  5057844 aggcaccaaccttttt 5057829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 12 - 214
Target Start/End: Complemental strand, 27015517 - 27015314
Alignment:
Q  12 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttc-ctaaggatc 109  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||    
T  27015517 atgattttcactctcccaagatgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatc 27015418  T
Q  110 ttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaacc 209  Q
    |||||||||||||| |||||| |||||||||||||||||||| ||||| |||||||||||||| |||| |  || | ||| |||||||||||||| ||||    
T  27015417 ttctcttttggttttacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgattct-tccccaaaaggcaccaacc 27015319  T
Q  210 ctttt 214  Q
    |||||    
T  27015318 ctttt 27015314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 213460 - 213251
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    ||||| |||||||||    
T  213460 caagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaacc----cttagcctttgattt 213366  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||| |  || ||||| || |||||    
T  213365 cactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatct-tctccaaa 213267  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  213266 aggcaccaaccctttt 213251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 28278311 - 28278098
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgattt 99  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||| ||||| |||||| ||||||||    
T  28278311 caagacactca-tgattttcactctcccaatgtgtttacaattgtttcccaactctagaatctaacccctaaaagagagccaacccttagcatttgattt 28278213  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | ||||  ||||||||||||| |||||||||| |||||||||||||||||||  | ||| |||||||||||||| |||| |  || ||||| ||||||||    
T  28278212 cactaacaatcttctcttttgatttcacaagactcacccaagttgctcacaatagtctctccactcatgtgtttcccaaccccatgaatct-tccccaaa 28278114  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  28278113 aggcaccaaccctttt 28278098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 27637786 - 27637961
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    |||||||||||   ||||||||||| |||||||||| ||||||||||||||||||||| |||||||| |||||||||||| |||| |||| |||||||||    
T  27637786 caagacactcatgaattttcactcttccaaggtgttcacaattgtttcccaactctagcatctaacccccaaaagagaacaaacttttagtctttgattt 27637885  T
Q  100 c-ctaaggatct--tctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttt 172  Q
    | ||||||||||  |||||||||||||||||||| |||||||||||||||| ||| |||||  |||||||||||||    
T  27637886 cactaaggatcttctctcttttggtttcacaagactcacccaagttgctcataaaagactcttcactcatgtgttt 27637961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 4160611 - 4160429
Alignment:
Q  17 tttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttcctaaggatcttctct 115  Q
    ||||||||  |||| ||||||||||||||||| ||||||| |||||||||| |||||||||||||||| |||||| ||| ||| ||||||||||||||||    
T  4160611 tttcactcaaccaatgtgtttacaattgtttctcaactct-gaatctaacccccaaaagagaaccaacccttagcctttaattacctaaggatcttctct 4160513  T
Q  116 tttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaag 200  Q
    ||||||||| ||||| |||||| ||||||||||||||||||| ||||| | ||| || |||| |  || ||||||||||||||||    
T  4160512 tttggtttcccaagattcaccctagttgctcacaaatgactctccacttacgtg-ttcccaaccctatgaatctctccccaaaag 4160429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 16641113 - 16641269
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||| ||||| |||||||| | |||||||||||||| |||| |||||||||||||||||| | ||||||||||||||||  |||| |||||||||    
T  16641113 caagacacttaatgaatttcactcactcaaggtgtttacaaatgttccccaactctagaatctaatccccaaaagagaaccaacctttagcctttgattt 16641212  T
Q  100 cctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgact 156  Q
      |||| |||||||||||||||||||||||| ||||| |||||| |||||| |||||    
T  16641213 tttaagtatcttctcttttggtttcacaagactcaccaaagttgttcacaattgact 16641269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 39 - 211
Target Start/End: Complemental strand, 316720 - 316550
Alignment:
Q  39 caattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttcctaaggatcttctcttttggtttcacaagagtcaccc 137  Q
    ||||||||| |||||| || ||||||||| |||||||||||||||| ||||| |||||||||||| ||||| |||||||||||| || ||||| ||| ||    
T  316720 caattgttttccaactttaaaatctaacccccaaaagagaaccaacccttagcctttgatttcct-aggattttctcttttggtctcccaagattca-cc 316623  T
Q  138 aagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaaccct 211  Q
    |||||||||||||| ||||| |   | |||||||| |||| |  || |||||||||||||||||||| ||||||    
T  316622 aagttgctcacaaa-gactctcttttgatgtgtttcccaaccttatgaatctctccccaaaaggcaccaaccct 316550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 211
Target Start/End: Original strand, 33906202 - 33906412
Alignment:
Q  3 agacactcaatgattttcactctcccaaggtgttta-caattgtttcccaactctagaatctaacctccaaaagagaac-caactc-ttagc-tttgatt 98  Q
    |||||||||||||| ||||||||| ||||||||||  || ||||||| |||||||||||| || || || ||| ||||| | | || ||||| |||||||    
T  33906202 agacactcaatgatgttcactctcgcaaggtgtttctcatttgtttcacaactctagaatatatccccccaaa-agaacgccagtcattagcctttgatt 33906300  T
Q  99 tcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||| || | ||| ||  | ||||||||  ||| |  || ||||||||||||||    
T  33906301 tcctaaggatcttctcttttggtttcccaagactcacccaagttgctcactaa-gtctctcctttgatgtgtttctcaaccccatgaatctctccccaaa 33906399  T
Q  199 aggcacgaaccct 211  Q
    |||||| ||||||    
T  33906400 aggcaccaaccct 33906412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 35616164 - 35616023
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttac-aattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagctttgattt 99  Q
    ||||| |||||||||||| ||||| |||||||||||| | |||||||||| ||||||||||||||||| | ||||||||| |||||||   |||||||||    
T  35616164 caagagactcaatgattt-cactcacccaaggtgtttcctaattgtttccaaactctagaatctaaccac-aaaagagaatcaactctagcctttgattt 35616067  T
Q  100 cctaaggatcttctcttttggtttcacaagagtcacccaagttg 143  Q
    | | | ||||||| ||||||||||| ||||| ||||| ||||||    
T  35616066 cttgatgatcttcgcttttggtttcccaagactcaccaaagttg 35616023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 152
Target Start/End: Original strand, 14689622 - 14689735
Alignment:
Q  39 caattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttcctaaggatcttctcttttggtttcacaagagtcaccc 137  Q
    |||||||||| ||||||||||||||| || |||||||||||||||| | |||| |||||||| ||||||||||| ||||||||| || ||||| | | |     
T  14689622 caattgtttcacaactctagaatctatcc-ccaaaagagaaccaacccctagcctttgattttctaaggatcttttcttttggtgtcccaagacttatct 14689720  T
Q  138 aagttgctcacaaat 152  Q
    |||||||||||||||    
T  14689721 aagttgctcacaaat 14689735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 21205873 - 21206002
Alignment:
Q  49 ccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttcctaaggatcttctcttttggtttcacaagagtcacccaagttgctca 147  Q
    ||||||| | |||||||||  ||||||||||||||  ||||| |||||||||| ||||| ||||| ||||| |||||  || | |||||||| || || |    
T  21205873 ccaactccataatctaaccctcaaaagagaaccaatccttagtctttgatttcataaggttcttcacttttagtttcctaaaattcacccaaatttctga 21205972  T
Q  148 caaatgactccccactcatgtgttttccaa 177  Q
    ||||||||||| ||||||||||||| ||||    
T  21205973 caaatgactcctcactcatgtgtttcccaa 21206002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 42926888 - 42926838
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaa 52  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  42926888 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaa 42926838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8566119 - 8566160
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  8566119 caagacactcaatgattttcactcacccaaggtgtttacaat 8566160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42428603 - 42428644
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  42428603 caagacactcaatgattttcactcacccaaggtgtttacaat 42428644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 533764 - 533713
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  533764 caagacacgcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 533713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5887589 - 5887640
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||||||    
T  5887589 caagacattcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 5887640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28750828 - 28750879
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  28750828 caagacactcaatgattttcactcacccaaggtgttttcaa-tgtttcccaac 28750879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31182968 - 31182917
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| || ||||||||||||| |||||||||||    
T  31182968 caagacactcaatgattttcactcacctaaggtgtttacaa-tgtttcccaac 31182917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 32636818 - 32636778
Alignment:
Q  2 aagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  32636818 aagacactcaatgattttcactcacccaaggtgtttacaat 32636778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 33831674 - 33831634
Alignment:
Q  2 aagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  33831674 aagacactcaatgattttcactcacccaaggtgtttacaat 33831634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39468722 - 39468773
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| | |||||||||||||| |||||||||||    
T  39468722 caagacactcaatgattttcactcactcaaggtgtttacaa-tgtttcccaac 39468773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 8019557 - 8019464
Alignment:
Q  26 cccaaggtgtttac-aattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttcctaaggatcttctcttttg 119  Q
    |||||||||||| | |||| |||||||||| |||||||||||| |||||| | ||||||| ||||| ||||||||| |||||||||||| ||||||    
T  8019557 cccaaggtgtttcctaattatttcccaactatagaatctaacccccaaaa-ataaccaac-cttagcctttgattttctaaggatcttcacttttg 8019464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 42426408 - 42426458
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaa 52  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||||||    
T  42426408 caagacactcaataattttcactcacccaaggtgtttacaa-tgtttcccaa 42426458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 13488198 - 13488157
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  13488198 caagacactcaataattttcactcacccaaggtgtttacaat 13488157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13239746 - 13239696
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  13239746 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 13239696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13343055 - 13343005
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  13343055 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 13343005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19806378 - 19806328
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  19806378 caagacactcaatgattt-cactcacccaaggtgtttacaa-tgtttcccaac 19806328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25412756 - 25412706
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  25412756 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 25412706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36074218 - 36074268
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  36074218 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 36074268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 538020 - 537970
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaa 52  Q
    |||||||| ||||||||||||||| |||||||||||||| | ||||||||||    
T  538020 caagacacgcaatgattttcactcacccaaggtgtttacga-tgtttcccaa 537970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 9049514 - 9049565
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaa 52  Q
    ||||||||||| ||||||| |||| ||||| |||||||||| ||||||||||    
T  9049514 caagacactcagtgatttttactcacccaaagtgtttacaaatgtttcccaa 9049565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 10700827 - 10700945
Alignment:
Q  7 actcaatgattttcactctcccaaggtgtttac-aattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttcctaa 104  Q
    |||||||||||||||| | |||||||||||| | ||||||||||||  | ||||||||| || |||||||   |||||  ||||| |||| ||||||| |    
T  10700827 actcaatgattttcacgcacccaaggtgtttcctaattgtttcccatttttagaatctagcccccaaaag-tcaccaaaccttagccttttatttcctga 10700925  T
Q  105 ggatcttctcttttggtttc 124  Q
    |||||||| | |||||||||    
T  10700926 ggatcttcacgtttggtttc 10700945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 30802782 - 30802723
Alignment:
Q  154 actccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaacccttt 213  Q
    |||| |||||||||||||||| || |  || |||||||||||||||||||| ||||||||    
T  30802782 actctccactcatgtgttttctaaccccatgaatctctccccaaaaggcacaaacccttt 30802723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 3075833 - 3075882
Alignment:
Q  3 agacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||  | ||||||||||||| |||||||||||    
T  3075833 agacactcaatgattttcactcatcaaaggtgtttacaa-tgtttcccaac 3075882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 32576471 - 32576533
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatct 63  Q
    ||||| ||| ||||||||||||||  |  |||||||||||||||||||||||| | |||||||    
T  32576471 caagagacttaatgattttcactcatcttaggtgtttacaattgtttcccaacccaagaatct 32576533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 13695865 - 13695910
Alignment:
Q  2 aagacactcaatgattttcactctcccaaggtgtttacaattgttt 47  Q
    |||| |||||||||||||||||| | |||||||||||||| |||||    
T  13695865 aagatactcaatgattttcactcacacaaggtgtttacaaatgttt 13695910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30683094 - 30683134
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  30683094 caagacactcaatgattttcactc-accaaggtgtttacaat 30683134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 16409477 - 16409427
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||| | |||||||||||    
T  16409477 caagacactcaatgattttcactc-accaaggtgtttacca-tgtttcccaac 16409427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26170776 - 26170726
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||| | |||||||||||    
T  26170776 caagacactcaatgattttcactc-accaaggtgtttacca-tgtttcccaac 26170726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26177885 - 26177835
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||| | |||||||||||    
T  26177885 caagacactcaatgattttcactc-accaaggtgtttacca-tgtttcccaac 26177835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30182583 - 30182533
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||| ||| |||||||||||    
T  30182583 caagacactcaatgattttcactc-accaaggtgtttgcaa-tgtttcccaac 30182533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 1e-68; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 1631905 - 1632118
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  1631905 caagacactca-tgattttcactctctcaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgattt 1632003  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||| |  || ||||| ||||||||    
T  1632004 cactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaaa 1632102  T
Q  199 aggcacgaaccctttt 214  Q
    || ||| |||||||||    
T  1632103 agacaccaaccctttt 1632118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 35447057 - 35447270
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  35447057 caagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgattt 35447155  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | ||||| ||||||||||||||||| |||||| |||||||||||||||||||| ||||| |||||||||||||| |||| |  || ||||| | ||||||    
T  35447156 cactaagtatcttctcttttggttttacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatct-ttcccaaa 35447254  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  35447255 aggcaccaaccctttt 35447270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 213
Target Start/End: Complemental strand, 45726923 - 45726712
Alignment:
Q  2 aagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttc 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  45726923 aagacactca-tgattttcactctcccaaggtgtttacaattgtttcctaaccctagaatctaacccccaaaagagaaccaacccttagcctttgatttc 45726825  T
Q  101 -ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaa 199  Q
     ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||| | || |  || ||||| |||||||||    
T  45726824 actaaggatcttctcttttggtttcacatgactcacccaagttgctcacaaatgactctccactcatgtgtttccaaaccccatgaatct-tccccaaaa 45726726  T
Q  200 ggcacgaacccttt 213  Q
    ||||| ||||||||    
T  45726725 ggcaccaacccttt 45726712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 13 - 214
Target Start/End: Original strand, 42288294 - 42288495
Alignment:
Q  13 tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttc-ctaaggatct 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||| ||||| |||||||||| ||||||||||    
T  42288294 tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaaacccgaaaagagaaccaacccttagcctttgatttcactaaggatct 42288393  T
Q  111 tctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaaccc 210  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||| |  || ||  ||| |||||||||||| |||||    
T  42288394 tctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaa--tcttcccaaaaggcaccaaccc 42288491  T
Q  211 tttt 214  Q
    ||||    
T  42288492 tttt 42288495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 24398050 - 24397839
Alignment:
Q  1 caagacactcaatgattttcactctcccaa-ggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagctttgattt 99  Q
    ||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||| |||||   |||||||| ||||||||||| ||    
T  24398050 caagacactcattgattttcactcttccaaaggtgtttacaattgtttcccaactctataatctaacccccaaa---gaaccaacccttagctttgactt 24397954  T
Q  100 cctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaa 199  Q
     |||||||| ||||||||||||||||||||| | |||||| ||| ||||||||||||| |||||||||||||| |||  |  || | |||||||| ||||    
T  24397953 tctaaggatattctcttttggtttcacaagactaacccaaattggtcacaaatgactctccactcatgtgtttaccagcccgatgagtctctccctaaaa 24397854  T
Q  200 ggcacgaaccctttt 214  Q
    ||||| |||||||||    
T  24397853 ggcaccaaccctttt 24397839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 17450586 - 17450428
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||||| |||||||||||||| |||| |||| |||||| |||| ||||| |||||||||    
T  17450586 caagacactcaatgattttcactcacccaaggtgtttgcaaatgtttgccaactctagaatccaacccccaatagagaatcaacccttagcctttgattt 17450487  T
Q  100 cctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactcc 158  Q
    ||||| ||||||||||||||||||||||||| ||||||||||| ||||||| |||||||    
T  17450486 cctaatgatcttctcttttggtttcacaagactcacccaagtttctcacaattgactcc 17450428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 33648165 - 33647951
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgttt-acaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagctttgattt 99  Q
    ||||||||||||| ||||||||||||||||| ||||| ||  || | ||||||||||||||||||||| |||||||| ||  ||| ||| ||||||||||    
T  33648165 caagacactcaattattttcactctcccaagatgttttacggttatgtcccaactctagaatctaacccccaaaagataattaaccctt-gctttgattt 33648067  T
Q  100 cc-taaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    || |||||||||||||||||||||| | |||| || || |||| ||| ||||||||||| | |||||| |||||||||| |   | ||||||||| ||||    
T  33648066 ccctaaggatcttctcttttggttttataagactcgcctaagtagctaacaaatgactctctactcatatgttttccaacctcgtgaatctctcctcaaa 33647967  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  33647966 aggcaccaaccctttt 33647951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 204
Target Start/End: Original strand, 30218250 - 30218410
Alignment:
Q  43 tgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttcctaaggatcttctcttttggtttcacaagagtcacccaagt 141  Q
    |||||||||||||||||  |||||| |||||||||||||||   ||||| ||||||||||||||||||  | ||||||||||| ||||| |||| |||||    
T  30218250 tgtttcccaactctagagcctaacccccaaaagagaaccaatatttagcttttgatttcctaaggatc-ccccttttggtttcgcaagactcactcaagt 30218348  T
Q  142 tgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcac 204  Q
    |||||||||| || || ||  |  ||||||| |||| |  || ||||||||||||||||||||    
T  30218349 tgctcacaaa-gattctcctttggtgtgtttcccaaccccatgaatctctccccaaaaggcac 30218410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 43731093 - 43730992
Alignment:
Q  49 ccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttcctaaggatcttctcttttggtttcacaagagtcacccaagttgctca 147  Q
    ||||||||||||| ||||| |||||||| |||||||  |||| ||||||||||||| |||| |||| |||||||||| ||||| |||||||| |||||||    
T  43731093 ccaactctagaatttaacc-ccaaaaga-aaccaacctttagactttgatttcctacggatattctattttggtttcccaagattcacccaaattgctca 43730996  T
Q  148 caaa 151  Q
    ||||    
T  43730995 caaa 43730992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 723917 - 723968
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  723917 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 723968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11049545 - 11049493
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  11049545 caagacactcaatgattttcacttacccaaggtgtttacaaatgtttcccaac 11049493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11690496 - 11690445
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  11690496 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 11690445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13121764 - 13121712
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  13121764 caagacactcaatgattttcactcacccaatgtgtttacaaatgtttcccaac 13121712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14633999 - 14634050
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  14633999 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 14634050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24885656 - 24885605
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  24885656 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 24885605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29867864 - 29867813
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  29867864 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 29867813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34139944 - 34139995
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  34139944 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 34139995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36773557 - 36773506
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  36773557 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 36773506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 42362347 - 42362296
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  42362347 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 42362296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 11067299 - 11067249
Alignment:
Q  2 aagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  11067299 aagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 11067249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17057542 - 17057583
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  17057542 caagacactcaatgattttcactcacccaaggtgtttacaat 17057583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17085525 - 17085566
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  17085525 caagacactcaatgattttcactcacccaaggtgtttacaat 17085566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36318182 - 36318223
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  36318182 caagacactcaatgattttcactcacccaaggtgtttacaat 36318223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 211
Target Start/End: Original strand, 42261826 - 42261993
Alignment:
Q  43 tgtttcccaactctagaatctaacctccaaaagagaaccaactcttagcttt-gatttcctaaggatcttctcttttggtttcacaagagtcacccaagt 141  Q
    ||||||||||||||||| ||||||| | ||||| |||||||  | ||||||| |||||||||| ||| | |||||||||| ||  |||| || |||||||    
T  42261826 tgtttcccaactctagattctaacccctaaaag-gaaccaatccgtagcttttgatttcctaatgatatactcttttggtctcgtaagactcgcccaagt 42261924  T
Q  142 tgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaaccct 211  Q
    |||||| |||  |||| ||  | |||||||| ||||||  || |||||||| || |||||||| ||||||    
T  42261925 tgctcataaa-aactctcctttgatgtgtttcccaatcccatgaatctctcacctaaaggcaccaaccct 42261993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 7451158 - 7451118
Alignment:
Q  137 caagttgctcacaaatgactccccactcatgtgttttccaa 177  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  7451158 caagttgctcacaaatgactctccactcatgtgttttccaa 7451118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11151764 - 11151815
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||| |||||||||||||||||| |||||||||||||||| |||||||||||    
T  11151764 caagagactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 11151815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39284880 - 39284829
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||| |||||||||||||||||| |||||||||||||||| |||||||||||    
T  39284880 caagatactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 39284829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 33162623 - 33162676
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactc 55  Q
    |||||||||| |||||||||| || |||||||||||||||| |||||||||||||    
T  33162623 caagacactcgatgattttcaatcacccaaggtgtttacaa-tgtttcccaactc 33162676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2334591 - 2334641
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  2334591 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 2334641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4503306 - 4503356
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  4503306 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 4503356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5723428 - 5723478
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  5723428 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 5723478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12123757 - 12123809
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||| |||||||||||||  |||||||||||| || |||||||||||    
T  12123757 caagacactcgatgattttcactcatccaaggtgtttataaatgtttcccaac 12123809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 14202584 - 14202631
Alignment:
Q  5 acactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  14202584 acactcaataattttcactcacccaaggtgtttacaa-tgtttcccaac 14202631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38312235 - 38312184
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| | |||||||| ||||| |||||||||||    
T  38312235 caagacactcaatgattttcactcacacaaggtgtatacaa-tgtttcccaac 38312184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 45099749 - 45099699
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  45099749 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 45099699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4484504 - 4484554
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  4484504 caagacactcaatgatttacactc-accaaggtgtttacaa-tgtttcccaac 4484554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5700295 - 5700347
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||| |||||| || ||||| |||||||||| |||||| ||||    
T  5700295 caagacactcaatgtttttcattcacccaaagtgtttacaaatgtttctcaac 5700347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7815446 - 7815498
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||| ||||||||||||| | || ||||||||||||| |||||| ||||    
T  7815446 caagacacgcaatgattttcacccacctaaggtgtttacaaatgtttctcaac 7815498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36205837 - 36205887
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||| | |||||||||||    
T  36205837 caagacactcaatgattttcactc-accaaggtgtttacca-tgtttcccaac 36205887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36988249 - 36988299
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||| | |||||||||||    
T  36988249 caagacactcaatgattttcactc-accaaggtgtttacta-tgtttcccaac 36988299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 4e-68; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 6431966 - 6431754
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgattt 99  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||| ||||||||    
T  6431966 caagacactca-tgattttcactctcccaatgtgtttacaattgtttcccaactctagaatctaaccctcaaaagagaaccaacccttagcatttgattt 6431868  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||  |||||||||||||||||| |  || ||||| ||||||||    
T  6431867 cactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctacactcatgtgttttccaaccccatgaatct-tccccaaa 6431769  T
Q  199 aggcacgaacccttt 213  Q
    |||||| ||||||||    
T  6431768 aggcaccaacccttt 6431754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 12 - 214
Target Start/End: Complemental strand, 2390267 - 2390064
Alignment:
Q  12 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttc-ctaaggatc 109  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||    
T  2390267 atgattttcgctctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatc 2390168  T
Q  110 ttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaacc 209  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||  ||||||||||||||||||| |  || ||||| |||||||||| ||| ||||    
T  2390167 ttctcttttggtttcacaagactcacccaagttgctcacaaaagactatccactcatgtgttttccaaccccatgaatct-tccccaaaagccaccaacc 2390069  T
Q  210 ctttt 214  Q
    |||||    
T  2390068 ctttt 2390064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 2361145 - 2361357
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||    
T  2361145 caagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacct-caaaagagaaccaacccttagcctttgattt 2361242  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||| |||||||||||||| |||| |  || ||||  ||||||||    
T  2361243 cactaaggatcttctcttttggtttcataagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatc-atccccaaa 2361341  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  2361342 aggcaccaaccctttt 2361357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 12 - 213
Target Start/End: Original strand, 4512573 - 4512775
Alignment:
Q  12 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttc-ctaaggatc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||| ||||| |||||||||| |||||||||    
T  4512573 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatataacccccaaaagagaactaacccttagcctttgatttcactaaggatc 4512672  T
Q  110 ttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaacc 209  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| | || |  || ||||| |||||||||||||| ||||    
T  4512673 ttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttccaaaccccatgaatct-tccccaaaaggcaccaacc 4512771  T
Q  210 cttt 213  Q
    ||||    
T  4512772 cttt 4512775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 34310889 - 34311102
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||  |||| |||||||||    
T  34310889 caagacactca-tgattttcactctcccaaggtgtttacaattatttcccaactctagaatctaacccccaaaagagaaccaacctttagcctttgattt 34310987  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||  |  || || || ||||||||    
T  34310988 cactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgttttccatccccatgaacct-tccccaaa 34311086  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  34311087 aggcaccaaccctttt 34311102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 4508879 - 4509091
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||  ||||| |||||||||    
T  4508879 caagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccataaaagagaaccaatccttagcctttgattt 4508977  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||| |  || ||||| ||||||||    
T  4508978 cactaaggatcttatcttttggtttcacaagactcaccaaagttgctcacaaatgactctccactcatgtgtttcccaaccccatgaatct-tccccaaa 4509076  T
Q  199 aggcacgaacccttt 213  Q
    |||||| ||||||||    
T  4509077 aggcaccaacccttt 4509091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 3258990 - 3258778
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagctttgatttc 100  Q
    |||||||||||   ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||| |||||||||    
T  3258990 caagacactcatgaattttcactttcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaatgagaaccaacccttaggtttgatttc 3258891  T
Q  101 ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaag 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||| | ||| ||||| |||||||| ||||| |||  |  || ||||| ||||||||||    
T  3258890 ctaaggatcttctcttttggtttcacaagactcacccaagttgctaataaaagactctccactcatatgtttcccatccccatgaatct-tccccaaaag 3258792  T
Q  201 gcacgaaccctttt 214  Q
    |||| |||||||||    
T  3258791 gcaccaaccctttt 3258778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 12 - 214
Target Start/End: Original strand, 48599517 - 48599720
Alignment:
Q  12 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttc-ctaaggatc 109  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||| |||||||||| |||||||||    
T  48599517 atgattttcactcctccaaggtgtttacaattgtttcccaactctagaatataacccccaaaagagaaccaacccttagcctttgatttcactaaggatc 48599616  T
Q  110 ttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaacc 209  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||| | |||||||| |||||||| |  || ||||| |||||||||||||| ||||    
T  48599617 ttctcttttggtttcacaagactcacccaagttgctcacaaaagactctctactcatgttttttccaaccccatgaatct-tccccaaaaggcaccaacc 48599715  T
Q  210 ctttt 214  Q
    |||||    
T  48599716 ctttt 48599720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 12 - 213
Target Start/End: Original strand, 4510731 - 4510933
Alignment:
Q  12 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttc-ctaaggatc 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||   ||||| ||||||||| |||||||||    
T  4510731 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccataaaagagaaccaatcgttagcctttgatttcactaaggatc 4510830  T
Q  110 ttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaacc 209  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||| |  || ||||| |||||||||||||| ||||    
T  4510831 ttctcttttggtttcacaagactcaccaaagttgctcacaaatgactctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaacc 4510929  T
Q  210 cttt 213  Q
    ||||    
T  4510930 cttt 4510933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 6360095 - 6360258
Alignment:
Q  12 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttc-ctaaggatc 109  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||    
T  6360095 atgattttcattctcccaaggtgtttaaaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatc 6360194  T
Q  110 ttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgtttt 173  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  6360195 ttctcttttgatttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttt 6360258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 8359490 - 8359703
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaa-cctccaaaagagaaccaactcttagc-tttgatt 98  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||| ||||||||| || |||||| | |||||||||||||| |||||||    
T  8359490 caagacactca-tgattttcactctctcaaggtgtttacaattgttttccaactcaagaatctaaacccccaaaaaataaccaactcttagcctttgatt 8359588  T
Q  99 tc-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaa 197  Q
    || |||||||| ||||||||||||||||||||| ||| |||||||||||||||| ||||| |||||||||||||| |||| |  || ||||| |||||||    
T  8359589 tcactaaggattttctcttttggtttcacaagactcatccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaa 8359687  T
Q  198 aaggcacgaacccttt 213  Q
    ||||||| ||||||||    
T  8359688 aaggcaccaacccttt 8359703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 22328570 - 22328785
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctcc-aaaagagaaccaactcttagcttt-gatt 98  Q
    ||||||||||||||||||||| || | ||||||||||||||||||||||||||| ||| |||||||| || |||||||||||||| ||||||||| ||||    
T  22328570 caagacactcaatgattttcattccctcaaggtgtttacaattgtttcccaactttaggatctaaccccccaaaagagaaccaacccttagcttttgatt 22328669  T
Q  99 tcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
     | ||||||| ||||||||| ||||| ||||| |||||||||||||||||||||||||| | |||||||| ||| |||| |  || ||||||||||||||    
T  22328670 acataaggatattctcttttagtttcccaagattcacccaagttgctcacaaatgactctctactcatgtttttcccaaccctatgaatctctccccaaa 22328769  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| ||| |||||    
T  22328770 aggcaccaactctttt 22328785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 29608732 - 29608554
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    |||||||||||   | |||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  29608732 caagacactcatgaagtttcgctctctcaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgattt 29608633  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaa 177  Q
    | ||||| ||||||| |||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| ||||    
T  29608632 cactaagaatcttctattttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaa 29608554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 22269968 - 22269796
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagctt-tgattt 99  Q
    |||||||||||   |||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||| | |||| | ||||||    
T  22269968 caagacactcatgaattttcactctcccaaggtgtttagaattgtttcc-aactctagaatctaacccccaaaagagaaccaacccatagcctatgattt 22269870  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttt 172  Q
    | ||||||||||||| |||||||||||||||| ||||||||||| ||| |||  ||||| ||||||||||||||    
T  22269869 cactaaggatcttctattttggtttcacaagactcacccaagtttctctcaatagactctccactcatgtgttt 22269796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36146581 - 36146633
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  36146581 caagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaac 36146633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 1360326 - 1360478
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttac-aattgtttcccaactctagaatctaa-cctccaaaagagaaccaactctta-gctttgat 97  Q
    ||||| |||||||||||| ||||| || ||||||||| | ||||||||  |||||||||||||||| || |||||||||||||||  | ||  |||||||    
T  1360326 caagagactcaatgattt-cactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaaagagaaccaatccatatcctttgat 1360424  T
Q  98 ttcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaa 151  Q
    |||| ||  || ||||||||||||||  ||||| |||| |||||||||| ||||    
T  1360425 ttcccaaaaatattctcttttggttttccaagactcactcaagttgctcgcaaa 1360478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 5116539 - 5116426
Alignment:
Q  91 ctttgatttcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctc 190  Q
    |||||||||||| ||||||||||||||||||| | ||||| ||||| |||||  ||||||||||| | |   | | |||||| |||||| ||| ||||||    
T  5116539 ctttgatttcctgaggatcttctcttttggttacccaagactcacctaagtttatcacaaatgaccctcatttgaagtgtttaccaatccaatgaatctc 5116440  T
Q  191 tccccaaaaggcac 204  Q
    || |||||||||||    
T  5116439 tctccaaaaggcac 5116426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4538713 - 4538764
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  4538713 caagacactcaatgattttcactcacccaaggtgtttacaatt-tttcccaac 4538764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24526070 - 24526121
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  24526070 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 24526121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31733142 - 31733193
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  31733142 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 31733193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43864239 - 43864188
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  43864239 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 43864188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14070006 - 14070047
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  14070006 caagacactcaatgattttcactcacccaaggtgtttacaat 14070047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14380034 - 14380075
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  14380034 caagacactcaatgattttcactcacccaaggtgtttacaat 14380075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31105566 - 31105607
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  31105566 caagacactcaatgattttcactcacccaaggtgtttacaat 31105607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 47674116 - 47674157
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  47674116 caagacactcaatgattttcactcacccaaggtgtttacaat 47674157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1113652 - 1113601
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  1113652 caagacactcaatgattttcactcacccaagttgtttacaa-tgtttcccaac 1113601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4586156 - 4586105
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  4586156 caagacactcaatgatttacactcacccaaggtgtttacaa-tgtttcccaac 4586105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8153337 - 8153286
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  8153337 caagacactcaatgattttcactcacccaatgtgtttacaa-tgtttcccaac 8153286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12098032 - 12098083
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  12098032 caagacactcaatgattttcactcacccaagatgtttacaa-tgtttcccaac 12098083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 23794024 - 23794149
Alignment:
Q  26 cccaaggtgtttacaa-ttgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttcctaaggatcttctcttttggttt 123  Q
    ||||| |||||||||| ||||||  |||||||||||||||||| | ||| ||  ||||||  ||||| |||||||| |||||||||| |||||||||| |    
T  23794024 cccaatgtgtttacaaattgtttttcaactctagaatctaaccacaaaatga--accaaccattagcctttgattttctaaggatctcctcttttggtct 23794121  T
Q  124 cacaagagtcacccaagttgctcacaaa 151  Q
    |  | || |||||||| |||||||||||    
T  23794122 cttacgattcacccaaattgctcacaaa 23794149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 27347812 - 27347761
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  27347812 caagacactcaatgattttcactcacccaatgtgtttacaa-tgtttcccaac 27347761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30024905 - 30024945
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  30024905 caagacactcaatgattttcactcacccaaggtgtttacaa 30024945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38671395 - 38671446
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||||||||||    
T  38671395 caagacactcaatgattttcgctcacccaaggtgtttacaa-tgtttcccaac 38671446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41649183 - 41649234
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  41649183 caagacactcaatgattttcacttacccaaggtgtttacaa-tgtttcccaac 41649234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 47676309 - 47676360
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||| |||||||||||| |||||||||||||||| |||||||||||    
T  47676309 caagacactcattgattttcactcacccaaggtgtttacaa-tgtttcccaac 47676360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48491574 - 48491523
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  48491574 caagacactcaatgattttcactcacccaaagtgtttacaa-tgtttcccaac 48491523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23555034 - 23554982
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactc 55  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  23555034 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaactc 23554982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 43363683 - 43363737
Alignment:
Q  96 atttcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaa 150  Q
    ||||||||| |||||||||||||||| || ||||| |||||||| ||||||||||    
T  43363683 atttcctaaagatcttctcttttggtctctcaagattcacccaaattgctcacaa 43363737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25615858 - 25615817
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  25615858 caagacactcaatgattttctctcacccaaggtgtttacaat 25615817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2761475 - 2761526
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||| ||||||||||||| ||||| |||||||||| |||||||||||    
T  2761475 caagacactcgatgattttcactcacccaatgtgtttacaa-tgtttcccaac 2761526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4178769 - 4178719
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  4178769 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 4178719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4253702 - 4253754
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||| |||||||||||||||||| || ||||||||||||| ||||| |||||    
T  4253702 caagaaactcaatgattttcactcacctaaggtgtttacaaatgttttccaac 4253754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5514182 - 5514234
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||| ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  5514182 caagaaactcaatgattttcactcatcgaaggtgtttacaagtgtttcccaac 5514234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 18126635 - 18126588
Alignment:
Q  5 acactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  18126635 acactcaatgattttcactcacccaagttgtttacaa-tgtttcccaac 18126588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24514934 - 24514984
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  24514934 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 24514984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29991049 - 29990999
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  29991049 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 29990999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 35853909 - 35853859
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  35853909 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 35853859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39731371 - 39731321
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  39731371 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 39731321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41317607 - 41317658
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||| ||||||||||||||||||  ||||||||||||||| |||||||||||    
T  41317607 caagagactcaatgattttcactcatccaaggtgtttacaa-tgtttcccaac 41317658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48408797 - 48408747
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  48408797 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 48408747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48489426 - 48489375
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||| | |||||||||||||| |||||||||||||||| |||||||||||    
T  48489426 caagacatttaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 48489375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25767131 - 25767180
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaa 52  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  25767131 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaa 25767180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 26417311 - 26417261
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaa 52  Q
    |||||||||||||||||||||| | | |||||||||||||| ||||||||||    
T  26417311 caagacactcaatgattttcacccgctcaaggtgtttacaa-tgtttcccaa 26417261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 31518790 - 31518752
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttac 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  31518790 caagacactcgatgattttcactcacccaaggtgtttac 31518752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 37545121 - 37545199
Alignment:
Q  39 caattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttga-tttcctaaggatcttctcttt 117  Q
    ||||||||||| ||||||  ||||||||||  |||| ||||||||||||||| |||||| |||  ||||||||||||||||    
T  37545121 caattgtttcctaactctgtaatctaacct--aaaaaagaaccaactcttagcctttgatttttgtaaggatcttctcttt 37545199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19502172 - 19502122
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||| ||||||  ||||||||||||||| |||||||||||    
T  19502172 caagacactcaatgattctcactc-accaaggtgtttacaa-tgtttcccaac 19502122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 22552697 - 22552757
Alignment:
Q  91 ctttgatttcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaa 151  Q
    ||||||||||||| | ||||||||||||||| || ||||| ||||||| || | |||||||    
T  22552697 ctttgatttcctatgaatcttctcttttggtctcccaagattcacccatgtagttcacaaa 22552757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36574688 - 36574740
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||| || |||||||||| || ||||||||||||| ||||| |||||    
T  36574688 caagacactcgataattttcactcacctaaggtgtttacaaatgttttccaac 36574740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 7322 - 7110
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgattt 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  7322 caagacactca-tgattttcactctcccaaggtgtttacaattgtttcc-agctctagaatctaacccccaaaagagaaccaacccttagcctttgattt 7225  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
      |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| |  || ||||| ||||||||    
T  7224 tactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgttttccaaccccatgaatct-tccccaaa 7126  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  7125 aggcaccaaccctttt 7110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 7e-64; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 40221740 - 40221531
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||| |||||||||    
T  40221740 caagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacctttagcctttgattt 40221642  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | ||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||| |||||||||||||| |||| |  || ||||| ||||||||    
T  40221641 cactaaggatcttctcttttggttttacaagactcacctaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaaa 40221543  T
Q  199 aggcacgaaccc 210  Q
    |||||| |||||    
T  40221542 aggcactaaccc 40221531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 11383981 - 11383768
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  11383981 caagacactca-tgattttcactctcccaaggtgtttacaattatttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgattt 11383883  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||  ||||| |||| ||| |||| |  || ||||| ||| ||||    
T  11383882 cactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactttccacttatgtatttcccaaccccatgaatct-tcctcaaa 11383784  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  11383783 aggcaccaaccctttt 11383768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 12 - 214
Target Start/End: Complemental strand, 40328764 - 40328561
Alignment:
Q  12 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttc-ctaaggatc 109  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||| |||| ||||    
T  40328764 atgattttcactctcccaagatgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaactcatagcctttgatttcactaaagatc 40328665  T
Q  110 ttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaacc 209  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||  ||||||||||||| |||  |  || ||||| |||| ||||||||| ||||    
T  40328664 ttctcttttggtttcacaagactcacccaagttgctcacaaaagactctacactcatgtgtttcccatccccatgaatct-tccctaaaaggcaccaacc 40328566  T
Q  210 ctttt 214  Q
    |||||    
T  40328565 ctttt 40328561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 44353788 - 44353577
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||| ||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  44353788 caagatactcaatgatttttactcacccaatgtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgattt 44353689  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | ||||| ||||| |||||||||||||||||| |||||||||||||||||  ||||||| ||||||||||||||||||| |  || ||||| || |||||    
T  44353688 cactaagaatcttttcttttggtttcacaagactcacccaagttgctcaccgatgactctccactcatgtgttttccaaccccatgaatct-tctccaaa 44353590  T
Q  199 aggcacgaaccct 211  Q
    |||||| ||||||    
T  44353589 aggcaccaaccct 44353577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 4283519 - 4283342
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  4283519 caagacactca-tgattttcactctcctaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgattt 4283421  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaa 177  Q
    | |||||||||||||||||||||||||||||| ||| ||||||| |||||||| ||||  |||||||||||||| ||||    
T  4283420 cactaaggatcttctcttttggtttcacaagactcaaccaagtttctcacaaaagactttccactcatgtgtttcccaa 4283342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 42435164 - 42435377
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||  ||||||||||||||| ||||| |||||||||    
T  42435164 caagacactca-tgattttcactctcccaaagtgtttacaattgtttaccaactctagaatctaaccctcaaaagagaaccaacccttagcctttgattt 42435262  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||| ||| |||| ||||| |||| |  || ||||| ||||||||    
T  42435263 cactaaggatcttctcttttggtttcacaagactcactcaagttgctcacaaaagactctccattcatatgtttcccaaccccatgaatct-tccccaaa 42435361  T
Q  199 aggcacgaaccctttt 214  Q
    || ||| |||| ||||    
T  42435362 agtcaccaaccttttt 42435377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 150
Target Start/End: Complemental strand, 18655385 - 18655246
Alignment:
Q  12 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttc-ctaaggatc 109  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| | |||| ||||| |||||||||| |||||||||    
T  18655385 atgattttcactctcccaaggtgtttacaattgtttcctaagtctagaatctaacc-ccaaaagagtatcaacccttagcctttgatttcactaaggatc 18655287  T
Q  110 ttctcttttggtttcacaagagtcacccaagttgctcacaa 150  Q
    |||||||||| |||||||||| ||||| |||||||||||||    
T  18655286 ttctcttttgatttcacaagactcaccgaagttgctcacaa 18655246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 200
Target Start/End: Complemental strand, 40585669 - 40585521
Alignment:
Q  51 aactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcaca 149  Q
    |||| ||||||||| || |||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |  ||| | |||||||| |||||||||    
T  40585669 aactttagaatctaccc-ccaaaagagaaccaacccttagtctttgatttcctaaggatcttctcttttggtctaccaatactcacccaaattgctcaca 40585571  T
Q  150 aatgactccccactcatgtgttttccaatcaaattaatctctccccaaaag 200  Q
    || ||||| ||  | |||||||||| || |  || |||||||| |||||||    
T  40585570 aa-gactctcctttgatgtgttttcaaaccccatgaatctctcaccaaaag 40585521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18141816 - 18141764
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  18141816 caagacactcaatgattttcactcgcccaaggtgtttacaaatgtttcccaac 18141764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 33655477 - 33655628
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaa-ttgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatt 98  Q
    |||||||||||||||||| |||||  ||||| ||||| ||| || ||| ||||||||| ||| |||||    ||||||||||||| |||| | |||||||    
T  33655477 caagacactcaatgattt-cactcatccaagatgttttcaaattattttccaactctaaaatttaacccttgaaagagaaccaacccttaacctttgatt 33655575  T
Q  99 tcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaa 151  Q
    | ||||||||||||||||||| | ||  |||| |||||||| |||||||||||    
T  33655576 ttctaaggatcttctcttttgttctcctaagattcacccaaattgctcacaaa 33655628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8965864 - 8965914
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttccca 51  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  8965864 caagacactcaatgattttcactcacccaaggtgtttacaaatgtttccca 8965914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4731653 - 4731602
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  4731653 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 4731602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 9633816 - 9633904
Alignment:
Q  106 gatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccc 194  Q
    ||||||||| |||||||||  |||| |||||||||||||||||||||||||| |  || |||||||| |||| |  |||||||||||||    
T  9633816 gatcttctcgtttggtttcctaagattcacccaagttgctcacaaatgactctcatcttatgtgtttaccaaccccattaatctctccc 9633904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30291601 - 30291549
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||| || |||||||||||||||| |||||||||||    
T  30291601 caagacactcaatgattttcaatcacccaaggtgtttacaaatgtttcccaac 30291549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41365020 - 41365071
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  41365020 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 41365071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43036418 - 43036367
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  43036418 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 43036367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 41366787 - 41366837
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaa 52  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  41366787 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaa 41366837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5689266 - 5689213
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactc 55  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  5689266 caagacactcaatgattttcactcacccaaggtgtttacaa-tgtttccaaactc 5689213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 10240113 - 10240004
Alignment:
Q  39 caattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagctttgatttcctaaggatcttctcttttggtttcacaagagtcaccca 138  Q
    |||||||||||||| |||||||||||||  || ||||||||||||||||||||  ||||||  |||||||||||| |||| ||    ||||| ||| |||    
T  10240113 caattgtttcccaaatctagaatctaac--cccaaagagaaccaactcttagc-ctgattttttaaggatcttcttttttagtagtccaagattcatcca 10240017  T
Q  139 agttgctcacaaa 151  Q
    |||| ||||||||    
T  10240016 agttactcacaaa 10240004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10930372 - 10930424
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaact 54  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  10930372 caagacactca-tgattttcactctcccaaaatgtttacaattgtttcccaact 10930424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27811273 - 27811232
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  27811273 caagacactcaatgattttcactcacccaaggtgtttacaat 27811232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4743376 - 4743427
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||||||||||    
T  4743376 caagacactcaatgattttcgctcacccaaggtgtttacaa-tgtttcccaac 4743427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 10020398 - 10020292
Alignment:
Q  43 tgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgatttcctaaggatcttctcttttggtttcacaagagtcacccaagt 141  Q
    |||||||||||||||||||| |||| | |||||| ||| ||| |||||| ||||||||||||||||||| ||||||||||  |  |||| ||||| ||||    
T  10020398 tgtttcccaactctagaatccaacc-caaaaaga-aacaaacccttagcctttgatttcctaaggatctcctcttttggtaccctaagattcacctaagt 10020301  T
Q  142 tgctcacaa 150  Q
    || ||||||    
T  10020300 tgttcacaa 10020292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15212781 - 15212730
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||||||    
T  15212781 caagacattcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 15212730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33352145 - 33352094
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||| || |||||||||||||||| |||||||||||    
T  33352145 caagacactcaatgattttcaatcacccaaggtgtttacaa-tgtttcccaac 33352094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1345544 - 1345597
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactc 55  Q
    ||||||| |||||||||||||||| |||||||||||||||| | |||||||||||    
T  1345544 caagacattcaatgattttcactcacccaaggtgtttacaa-tatttcccaactc 1345597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 10101351 - 10101475
Alignment:
Q  27 ccaaggtgtttacaa-ttgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttcctaaggatcttctcttttggtttc 124  Q
    ||||||||||||||| || ||||| ||| ||||||||||||| ||||||  | |||||| ||||| |||||||||  ||||||||| |||||||| | ||    
T  10101351 ccaaggtgtttacaaattatttcctaacactagaatctaacc-ccaaaac-gtaccaacccttagactttgatttaataaggatctcctcttttgatctc 10101448  T
Q  125 acaagagtcacccaagttgctcacaaa 151  Q
      |||| ||| ||||||||||||||||    
T  10101449 ctaagattcatccaagttgctcacaaa 10101475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40321075 - 40321022
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactc 55  Q
    ||||||||||||||||||||| || | |||||||||||||| |||||||||||||    
T  40321075 caagacactcaatgattttcagtcactcaaggtgtttacaa-tgtttcccaactc 40321022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4162495 - 4162454
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  4162495 caagacactcaatgattttcactcgctcaaggtgtttacaat 4162454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1746392 - 1746442
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  1746392 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 1746442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3303843 - 3303894
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||| |||||||||||||||||| | |||||||||||||| |||||||||||    
T  3303843 caagatactcaatgattttcactcactcaaggtgtttacaa-tgtttcccaac 3303894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6598967 - 6598916
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||| |||||||||||||| | |||||||||||||| |||||||||||    
T  6598967 caagacacttaatgattttcactcactcaaggtgtttacaa-tgtttcccaac 6598916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6674420 - 6674369
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||| |||||||||||||| | |||||||||||||| |||||||||||    
T  6674420 caagacacttaatgattttcactcactcaaggtgtttacaa-tgtttcccaac 6674369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 8153753 - 8153705
Alignment:
Q  5 acactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||  ||||||||| ||||| |||||||||||    
T  8153753 acactcaatgattttcactcatccaaggtgtatacaaatgtttcccaac 8153705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 11136989 - 11136933
Alignment:
Q  147 acaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggca 203  Q
    ||||||||||| ||||||||||||||||| | | ||| || ||||||||||||||||    
T  11136989 acaaatgactctccactcatgtgttttcctacccaatgaacctctccccaaaaggca 11136933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17982647 - 17982597
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  17982647 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 17982597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 18106251 - 18106302
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||  |||||||||| |||||||||||||||| |||||||||||    
T  18106251 caagacactcaacaattttcactcacccaaggtgtttacaa-tgtttcccaac 18106302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31218251 - 31218201
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  31218251 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 31218201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 44303848 - 44303798
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  44303848 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 44303798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 214
Target Start/End: Original strand, 3846083 - 3846205
Alignment:
Q  91 ctttgatttcctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctc 190  Q
    ||||||||||| || |||| ||||||||||| ||  |||| | |||||| ||||||||||| || ||  | ||||||||||| |||| |  || ||||||    
T  3846083 ctttgatttccaaaagatcgtctcttttggtatccaaagatttacccaatttgctcacaaa-gaatcttctctcatgtgtttcccaaccccatgaatctc 3846181  T
Q  191 tccccaaaaggcacgaaccctttt 214  Q
    |||||||||| ||| ||| |||||    
T  3846182 tccccaaaagacaccaactctttt 3846205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10929794 - 10929753
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||   ||||||||||||||||    
T  10929794 caagacactcaatgattttcactaatccaaggtgtttacaat 10929753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 19945534 - 19945574
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  19945534 caagacactcaatgattttcactc-accaaggtgtttacaat 19945574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34254503 - 34254543
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  34254503 caagacactcaatgattttcactc-accaaggtgtttacaat 34254543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1292636 - 1292687
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||| |||||||||| ||||||||||| || | |||||||||||    
T  1292636 caagacactcaataattttcactcacccaaggtgttcac-agtgtttcccaac 1292687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12702812 - 12702862
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||| ||||||||||||||  ||||||||||||||| |||||||||||    
T  12702812 caagacacttaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 12702862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42498188 - 42498149
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaa 41  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  42498188 caagacactcaatgattttcactc-accaaggtgtttacaa 42498149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 80456 - 80669
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgattt 99  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| ||||||||| ||||| |||||||||    
T  80456 caagacactca-tgattttcactctcccaaggtgttcacaattgtttcctaactctagaatctaacccccaaaatagaaccaacccttagcctttgattt 80554  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
    | |||||||||| ||||||| ||||| ||||| |||||||||||||||||||| ||||| || ||||||||||| |||| |  || ||||| ||||||||    
T  80555 cactaaggatctactcttttagtttcccaagactcacccaagttgctcacaaaagactctccgctcatgtgtttcccaaccccatgaatct-tccccaaa 80653  T
Q  199 aggcacgaaccctttt 214  Q
    |||||| |||||||||    
T  80654 aggcaccaaccctttt 80669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 12 - 214
Target Start/End: Original strand, 18186 - 18387
Alignment:
Q  12 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttag-ctttgatttc-ctaaggatc 109  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  18186 atgattttcactctcccaaagtgtttacaattgtttcc-aactctataatctaacc-ccaaaagagaaccaactcttagtctttgatttcactaaggatc 18283  T
Q  110 ttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaacc 209  Q
    |||||||||||||| |||||| |||| |||||||||||||||| |||| ||||||||||||||| ||| |  || |||||  ||||||||||||| ||||    
T  18284 ttctcttttggttttacaagactcactcaagttgctcacaaataactctccactcatgtgtttt-caacctcatgaatcttcccccaaaaggcaccaacc 18382  T
Q  210 ctttt 214  Q
    |||||    
T  18383 ctttt 18387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 11552 - 11341
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaactcttagc-tttgattt 99  Q
    |||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||| | ||||||||| ||||  ||||| ||||||||    
T  11552 caagacactcaatgattttcactcacc-aaggtgtttacaat-gtttcccaactctagaatctaaccccaaaaagagaaacaacctttagcctttgattt 11455  T
Q  100 c-ctaaggatcttctcttttggtttcacaagagtcacccaagttgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaa 198  Q
      |||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||| |  || ||||| || |||||    
T  11454 tactaatgatcttctcttttggtttcacaagactcacccaagttgctcagaaatgactctccactcatgtgtttcccaaccccatgaatct-tctccaaa 11356  T
Q  199 aggcacgaacccttt 213  Q
    |||||| ||||||||    
T  11355 aggcaccaacccttt 11341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 150
Target Start/End: Original strand, 1591 - 1729
Alignment:
Q  23 tctcccaaggtgtttac-aattgtttcccaactctagaatctaacctccaaaagagaaccaactctt----------agc-tttgatttcctaaggatct 110  Q
    ||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||| |||          ||| |||||||||||||||||||    
T  1591 tctcccaaggtgttttctaattgtttcccaactctagaatctaacc-ccaaaagagaaccaacacttataagttataagcttttgatttcctaaggatct 1689  T
Q  111 tctcttttggtttcacaagagtcacccaagttgctcacaa 150  Q
    ||||||||| | || ||||| || ||||||||||||||||    
T  1690 tctcttttgatctcccaagactcgcccaagttgctcacaa 1729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 211
Target Start/End: Original strand, 490661 - 490828
Alignment:
Q  43 tgtttcccaactctagaatctaacctccaaaagagaaccaactcttagcttt-gatttcctaaggatcttctcttttggtttcacaagagtcacccaagt 141  Q
    ||||||||||||||||| ||||||| | ||||| |||||||  | ||||||| |||||||||| ||| | |||||||||| ||  |||| || |||||||    
T  490661 tgtttcccaactctagattctaacccctaaaag-gaaccaatccgtagcttttgatttcctaatgatatactcttttggtctcgtaagactcgcccaagt 490759  T
Q  142 tgctcacaaatgactccccactcatgtgttttccaatcaaattaatctctccccaaaaggcacgaaccct 211  Q
    |||||| |||  |||| ||  | |||||||| ||||||  || |||||||| || |||||||| ||||||    
T  490760 tgctcataaa-aactctcctttgatgtgtttcccaatcccatgaatctctcacctaaaggcaccaaccct 490828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 25041 - 24986
Alignment:
Q  7 actcaatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatct 63  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||| | |||||||    
T  25041 actcaatgattt-cactctcccaaggtgtttacaattgtttccaaacccaagaatct 24986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 149270 - 149311
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  149270 caagacactcaatgattttcactaccccaaggtgtttacaat 149311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 911 - 861
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  911 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 114597 - 114547
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  114597 caagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 114547  T

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Target: scaffold0129 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 19117 - 19163
Alignment:
Q  6 cactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  19117 cactcaatgattttcactcacccaa-gtgtttacaaatgtttcccaac 19163  T

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Target: scaffold0066 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 20594 - 20629
Alignment:
Q  7 actcaatgattttcactctcccaaggtgtttacaat 42  Q
    |||||||||||||||||| |||||||||||||||||    
T  20594 actcaatgattttcactcacccaaggtgtttacaat 20629  T

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Target: scaffold0491 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11335 - 11385
Alignment:
Q  1 caagacactcaatgattttcactctcccaaggtgtttacaattgtttcccaac 53  Q
    |||||||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  11335 caagacactcaatgatttacactc-accaaggtgtttacaa-tgtttcccaac 11385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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