View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14378_high_3 (Length: 400)
Name: NF14378_high_3
Description: NF14378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14378_high_3 |
 | |
|
| [»] scaffold0065 (1 HSPs) |
| | |
|
| [»] scaffold0671 (1 HSPs) |
| | |
|
| [»] scaffold0308 (1 HSPs) |
| | |
|
| [»] scaffold0034 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 370; Significance: 0; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 11474925 - 11475306
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11474925 |
taaggaggccctaactcaattggtggcaaaagtcttggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
11475024 |
T |
|
| Q |
101 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
11475025 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggtccaaaaacactaag |
11475124 |
T |
|
| Q |
201 |
tgtggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
300 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11475125 |
tatggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
11475224 |
T |
|
| Q |
301 |
aaaaacaaggcattaaagagcatttaatctgaaggaggaaagaatgcaagaattgaagaggaaagggacaagacttcaatga |
382 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11475225 |
aaaaacaaggcattaaagagcatttaatctgaaggaggaaagaatgcaagaattgaagaggaaagggacaagacttcaatga |
11475306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 34455003 - 34455169
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||| || |||||| |||||||||||||| ||||||| ||| || |||| ||||||||||||||||||||||| |
|
|
| T |
34455003 |
taaggaggcgctaactcaattggtggcaaacttcttggagttcaaacctacactaggaagcatgaagggtagaatgatcatgtgcatcaaaccattggag |
34455102 |
T |
|
| Q |
101 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtg |
168 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||| |
|
|
| T |
34455103 |
gaggggtggagcgcatctcttgcagcccattttatctagtt-atattgttatgttgtaataaaaagtg |
34455169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 354; Significance: 0; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 18775098 - 18774717
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
100 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
18775098 |
taaggaggacctaactcaattggtggaaaaagtcttggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccaatggag |
18774999 |
T |
|
| Q |
101 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
18774998 |
gaggggtggggcgcatctcttgctgcccattttatttagatgttcttgttatgttgtaataaaaagtgtaagagaccaattttggtccaaaaacactaag |
18774899 |
T |
|
| Q |
201 |
tgtggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
300 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18774898 |
tatggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
18774799 |
T |
|
| Q |
301 |
aaaaacaaggcattaaagagcatttaatctgaaggaggaaagaatgcaagaattgaagaggaaagggacaagacttcaatga |
382 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18774798 |
aaaaacaaggcattaaagagcatttaatctgaaggaggaaagaatgcaagaattgaagaggaaagggacaagacttcaatga |
18774717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 17465572 - 17465181
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatgg------------tcatgtgcatc |
88 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
17465572 |
taaggaggccctaacacaattggtggcaaaagtcttggagtccaaacctacactagaaagcatggaggataaaatggaggataaaatggtcatgtgcatc |
17465473 |
T |
|
| Q |
89 |
aaaccattggaggaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggccc |
188 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
17465472 |
aaaccattggaggaggggtggggcgcatctcttgctgcccattttgtttagttgttcttgttatgttgtaataaaaagtgcaaga--ccaattttggccc |
17465375 |
T |
|
| Q |
189 |
aaaaacactaagtgtggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgc |
288 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
17465374 |
aaaaacactaagcatggttattttgtgtgtttaatccattttaaagattccaaagctttaaatgaaatgttttgtgtgtttatttcgtgcaaaggagtgc |
17465275 |
T |
|
| Q |
289 |
tgaagacaaaagaaaaacaaggcattaaagagcatttaatctgaaggaggaaagaatgcaagaattgaagaggaaagggacaagacttcaatga |
382 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
17465274 |
tgaagacaaaagaaaaacaaggcattaaagagcttttaatctgaaggaggaaagaatgcaagaattgaagaggaaagagacaagacttcaatga |
17465181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 101 - 380
Target Start/End: Complemental strand, 17463061 - 17462782
Alignment:
| Q |
101 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
17463061 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaatactaag |
17462962 |
T |
|
| Q |
201 |
tgtggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
300 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17462961 |
tatggttattttgtgtgtttaatccattttaaagcttccaaagctttaaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
17462862 |
T |
|
| Q |
301 |
aaaaacaaggcattaaagagcatttaatctgaaggaggaaagaatgcaagaattgaagaggaaagggacaagacttcaat |
380 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
17462861 |
aaaaacaaggcattaaagagcatttaatctgaaggaggaaagaatgcaagaattgaagaggaaagagacaagacatcaat |
17462782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 18784048 - 18783946
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18784048 |
taaggaggccctaactcaattggtggaaaaagtcttggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
18783949 |
T |
|
| Q |
101 |
gag |
103 |
Q |
| |
|
||| |
|
|
| T |
18783948 |
gag |
18783946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 18445606 - 18445697
Alignment:
| Q |
149 |
ttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaagtgtggttattttgtgtgtttaatccattttaaagcttccaaa |
242 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||| ||||| ||||||||||||| || | | | |||||||| |||||||||||||||| |||| |
|
|
| T |
18445606 |
ttatgttgtaataaaa-gtgtaagggaccaattctggcc-aaaaacactaagtttgaatttctagtgtgttttatccattttaaagctttcaaa |
18445697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 350; Significance: 0; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 16156316 - 16156697
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16156316 |
taaggaggccctaactcaattggtggaaaaagtcttggagtccaaacctacactagaaatcatggaggataaaatggtcatgtgcatcaaaccattggag |
16156415 |
T |
|
| Q |
101 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaag |
200 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16156416 |
gaggggtggggcacatctcttgctgctcattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaag |
16156515 |
T |
|
| Q |
201 |
tgtggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
300 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16156516 |
tatggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
16156615 |
T |
|
| Q |
301 |
aaaaacaaggcattaaagagcatttaatctgaaggaggaaagaatgcaagaattgaagaggaaagggacaagacttcaatga |
382 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16156616 |
aaaaataaggcattaaagatcatttaatctgaaggaggaaagaatgcaagaattgaagaggaaagggacaagacttcaatga |
16156697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 1 - 343
Target Start/End: Complemental strand, 21369415 - 21369072
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
21369415 |
taaggaggccctaactcaattgatggcaaaagtcttggagtccaaacctacactagaaagcatggatgataaaatggtcatgtgcatcaaaccattggag |
21369316 |
T |
|
| Q |
101 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaag |
200 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
21369315 |
gaggggtggggcgcatctgttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagaatccaattttggcccaaaaacactaag |
21369216 |
T |
|
| Q |
201 |
tgtggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
300 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21369215 |
tatggttattttgtgtgtttaatccattttaaagcttccaaagctttaaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
21369116 |
T |
|
| Q |
301 |
a-aaaacaaggcattaaagagcatttaatctgaaggaggaaaga |
343 |
Q |
| |
|
| ||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
21369115 |
aaaaaacaaggcattaaagagtatttaatctgaaggaggaaaga |
21369072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 379
Target Start/End: Complemental strand, 22708615 - 22708237
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22708615 |
taaggaggccctaactcaattgatggcaaaagtcttggagttcaaacctacgctagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
22708516 |
T |
|
| Q |
101 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaag |
200 |
Q |
| |
|
|| || |||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| || ||||||||||||||||||| ||| |
|
|
| T |
22708515 |
gatggatggggcgcatatcttgctgcccattttatttagttatttttgttatgttgtaataaaaagtgtaagggatcaattttggcccaaaaacaacaag |
22708416 |
T |
|
| Q |
201 |
tgtggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
300 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| | ||| ||||||||||| | |
|
|
| T |
22708415 |
tatggttattttgtgtgtttaatccattttaaagcttccaaagctttaaatggaatgttttgtgtgtttattttgtgcaatgaagtactgaagacaaatg |
22708316 |
T |
|
| Q |
301 |
aaaaacaaggcattaaagagcatttaatctgaaggaggaaagaatgcaagaattgaagaggaaagggacaagacttcaa |
379 |
Q |
| |
|
||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
22708315 |
aaagacaagacattaaagaacatttaatctgaaggaggaaagaatgtaagaattgaaaaggaaacagacaagacttcaa |
22708237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 12365031 - 12364979
Alignment:
| Q |
207 |
tattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgtt |
259 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| |||| ||||||||||| |
|
|
| T |
12365031 |
tattttgtgtgtttaatccattttaaagtttccaaaactttaaatggaatgtt |
12364979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 350; Significance: 0; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 13180684 - 13180303
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13180684 |
taaggaggccctaactcaattggtggcaaaagtcttggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
13180585 |
T |
|
| Q |
101 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
13180584 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttataataaaaagtgtaagagaccaattttggtccaaaaacactaag |
13180485 |
T |
|
| Q |
201 |
tgtggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
300 |
Q |
| |
|
| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13180484 |
tatggttattttgtgtgtttaatccatttcgaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
13180385 |
T |
|
| Q |
301 |
aaaaacaaggcattaaagagcatttaatctgaaggaggaaagaatgcaagaattgaagaggaaagggacaagacttcaatga |
382 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13180384 |
aaaaacaaggcattaacgagcatttaatctgaaggatgaaagaatgcaagaattgaagaggaaagggacaagacttcaatga |
13180303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 33758762 - 33758381
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
100 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33758762 |
taaggaggccttaactcaattggtggcaaaagttttggagtccaaacctacactataaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
33758663 |
T |
|
| Q |
101 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaag |
200 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33758662 |
gaggggtggggcgcatctcttgctgtccattttatttagttgttcttattatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaag |
33758563 |
T |
|
| Q |
201 |
tgtggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
300 |
Q |
| |
|
| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
33758562 |
tatggttattttttgtgtttaatccattttaaagcttccaaagcttttaatggaatgttttgtgtgtttatttcgtgcaaaggagtgttgaagacaaaag |
33758463 |
T |
|
| Q |
301 |
aaaaacaaggcattaaagagcatttaatctgaaggaggaaagaatgcaagaattgaagaggaaagggacaagacttcaatga |
382 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
33758462 |
aaaaacaaggcattaaagagcatttaatctgaaagaggaaagaatgtaagaattgaagaggaaagagacaagacttcaatga |
33758381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 13185218 - 13184989
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13185218 |
taaggaggccctaactcaattggtggcaaaagtcttggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
13185119 |
T |
|
| Q |
101 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
13185118 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttataataaaaagtgtaagagaccaattttggtccaaaaacactaag |
13185019 |
T |
|
| Q |
201 |
tgtggttattttgtgtgtttaatccatttt |
230 |
Q |
| |
|
| |||||||||||||||||||||||||||| |
|
|
| T |
13185018 |
tatggttattttgtgtgtttaatccatttt |
13184989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 149 - 253
Target Start/End: Complemental strand, 16020125 - 16020022
Alignment:
| Q |
149 |
ttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaagtgtggttattttgtgtgtttaatccattttaaagcttccaa-agcttt |
247 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||| ||||| ||||||||||| | || | | | |||||||| |||||||||||||||| ||| |||||| |
|
|
| T |
16020125 |
ttatgttgtaataaaa-gtgtaagggaccaattctggcc-aaaaacactaattttgaatttctagtgtgttttatccattttaaagctttcaacagcttt |
16020028 |
T |
|
| Q |
248 |
gaatgg |
253 |
Q |
| |
|
||||| |
|
|
| T |
16020027 |
aaatgg |
16020022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 382
Target Start/End: Complemental strand, 13184990 - 13184961
Alignment:
| Q |
353 |
ttgaagaggaaagggacaagacttcaatga |
382 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
13184990 |
ttgaagaggaaagggacaagacttcaatga |
13184961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 238
Target Start/End: Original strand, 23331521 - 23331550
Alignment:
| Q |
209 |
ttttgtgtgtttaatccattttaaagcttc |
238 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
23331521 |
ttttgtgtgtttaatccattttaaagcttc |
23331550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 343; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 37259691 - 37260070
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37259691 |
taaggaggccctaactcaattggtggcaaaagtctt--agtccaaacatacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
37259788 |
T |
|
| Q |
101 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
37259789 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttattatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactgag |
37259888 |
T |
|
| Q |
201 |
tgtggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
300 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
37259889 |
tatggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggaatgctgaagacaaaag |
37259988 |
T |
|
| Q |
301 |
aaaaacaaggcattaaagagcatttaatctgaaggaggaaagaatgcaagaattgaagaggaaagggacaagacttcaatga |
382 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37259989 |
aaaaacaaggcattaaagagcatttaatctgaaggagggaagaatgcaagaattgaagaggaaagggacaagacttcaatga |
37260070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 334; Significance: 0; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 12638872 - 12639253
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12638872 |
taaggaggccctaactcaattggtggcaaaagtcttggagtccaaaccgacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
12638971 |
T |
|
| Q |
101 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
12638972 |
gaggggtggggcgcatctcttgctgcccattttatttaattgttcttgttatgttgtaataaaaagtgtaagagaccaattctggcccaaaaacactaag |
12639071 |
T |
|
| Q |
201 |
tgtggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
300 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
12639072 |
tatggttattttgtgtgtttaatccattttaaagcttccaaagctttaaatggaatgttttgtgtgtttatttcgtgcaaaaaagtgctgaaatcaaaag |
12639171 |
T |
|
| Q |
301 |
aaaaacaaggcattaaagagcatttaatctgaaggaggaaagaatgcaagaattgaagaggaaagggacaagacttcaatga |
382 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
12639172 |
aaaaacaaggcattaaagagcatttaatctgaaggaggaaataatgcaagaattgaagaggaaagagacaagacttcaatga |
12639253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 9343729 - 9344110
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
100 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9343729 |
taaggagagcctaactcaattggtggcaaaagtcttggagttcaaaccaacactagaaaacatggaggataaaatggtcatgtgcatcaaaccattggag |
9343828 |
T |
|
| Q |
101 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaa-agtgtaagagaccaattttggcccaaaaacactaa |
199 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||||||||||||| || ||||| |||||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
9343829 |
gaggggtggggtgcatctcttgctgcc-attttatttagttgtttttattatggtgtaataaaaaagtgtaagggaccaattttggcccaaaaacactaa |
9343927 |
T |
|
| Q |
200 |
gtgtggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaa |
299 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9343928 |
gtgtggttattttgtgtgtttaatccattttaaagcttccaaagctttaaatgaaatgttttgtgtgtttatttcgtgcaaagaagtgctgaagacaaaa |
9344027 |
T |
|
| Q |
300 |
gaaaaacaaggcattaaagagcatttaatctgaaggaggaaagaatgcaagaattgaagaggaaagggacaagacttcaatga |
382 |
Q |
| |
|
|||| ||| | |||||||||||||||||||||||||||||||||||||||||| |||| || ||| |||||||||||||||| |
|
|
| T |
9344028 |
gaaagacatgacattaaagagcatttaatctgaaggaggaaagaatgcaagaactgaaaagaaaacagacaagacttcaatga |
9344110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 21302575 - 21302302
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21302575 |
taaggaggccctaactcaattggtggcaaaagtcttggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
21302476 |
T |
|
| Q |
101 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
21302475 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggtccaaaaacacttat |
21302376 |
T |
|
| Q |
201 |
tgtggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttc |
274 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21302375 |
tatggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttc |
21302302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0065 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: scaffold0065
Description:
Target: scaffold0065; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 34551 - 34172
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34551 |
taaggaggccctaactcaattggtggcaaaagtcttagagttcaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
34452 |
T |
|
| Q |
101 |
gaggggtggggcgcatctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34451 |
gaggggtggggcgcatctcttgctgcccgttttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaag |
34352 |
T |
|
| Q |
201 |
tgtggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
300 |
Q |
| |
|
| |||||||||| |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34351 |
tatggttatttt--gtgtttaatccactttaaagcttccaaagctttaaatggattgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaag |
34254 |
T |
|
| Q |
301 |
aaaaacaaggcattaaagagcatttaatctgaaggaggaaagaatgcaagaattgaagaggaaagggacaagacttcaatga |
382 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
34253 |
aaaaacaaggcattaaggagcatttaatctgaaggaggaaataatgcaagaattgaagaggaaagagacaagacttcaatga |
34172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 315; Significance: 1e-177; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 16 - 382
Target Start/End: Complemental strand, 22822076 - 22821710
Alignment:
| Q |
16 |
tcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggaggaggggtggggcgca |
115 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
22822076 |
tcaattggtggcaaaagtcttggagtccaaacctacactagaaagcattgaggataaaatggtcatgtgcatcaaaccattggaggaggtgtagggcgca |
22821977 |
T |
|
| Q |
116 |
tctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaagtgtggttattttgtg |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||| |
|
|
| T |
22821976 |
tctcttgctgcccattttatttagttgttcttgttatgttgtaataaaaagtgtaagagacctattttagcccaaaaacactaagtatgattattttgtg |
22821877 |
T |
|
| Q |
216 |
tgtttaatccattttaaagcttccaaagctttgaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaagaaaaacaaggcatta |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22821876 |
tgtttaatccattttaaagcttccaaagctttaaatggaatgttttgtgtgtttatttcgtgcaaaggagtgctgaagacaaaagaaaaacaagacatta |
22821777 |
T |
|
| Q |
316 |
aagagcatttaatctgaaggaggaaagaatgcaagaattgaagaggaaagggacaagacttcaatga |
382 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
22821776 |
aagagcatttaatctgaaggagaaaataatgcaagaattgaagaggaaagagacaagacttcaatga |
22821710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 161 - 380
Target Start/End: Complemental strand, 22822291 - 22822072
Alignment:
| Q |
161 |
aaaaagtgtaagagaccaattttggcccaaaaacactaagtgtggttattttgtgtgtttaatccattttaaagcttccaaagctttgaatggaatgttt |
260 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
22822291 |
aaaaagtgtcagagaccaattttggcccaaaaacactaagtatggttattttgtgtgtttaatccattttaaagcttccaaagctttaaatggaatgttt |
22822192 |
T |
|
| Q |
261 |
tgtgtgtttatttcgtgcaaaggagtgctgaagacaaaagaaaaacaaggcattaaagagcatttaatctgaaggaggaaagaatgcaagaattgaagag |
360 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22822191 |
tgtgtgtttatttcgtgcaaaggagtgctgaagacaaaagaaaaacaagacattaaagagcatttaatctgaaggaggaaataatgcaagaattgaagag |
22822092 |
T |
|
| Q |
361 |
gaaagggacaagacttcaat |
380 |
Q |
| |
|
||||| |||||||||||||| |
|
|
| T |
22822091 |
gaaagagacaagacttcaat |
22822072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 22825825 - 22825684
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
100 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |
|
|
| T |
22825825 |
taaggaggccctaactcaatgggtggcaaaagtcttggagtccaaacctacactagaaagcattgaggataaaatggtcatgtgcatcaaaccattgaag |
22825726 |
T |
|
| Q |
101 |
gaggggtggggcgcatctcttgctgcccattttatttagttg |
142 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22825725 |
gaggggtggggtgcatctcttgctgcccattttatttagttg |
22825684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0671 (Bit Score: 91; Significance: 6e-44; HSPs: 1)
Name: scaffold0671
Description:
Target: scaffold0671; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 1297 - 1399
Alignment:
| Q |
1 |
taaggaggccctaactcaattggtggcaaaagtcctggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
100 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1297 |
taaggaggtcctaactcaattggtggtaaaagtcttggagtccaaacctacactagaaagcatggaggataaaatggtcatgtgcatcaaaccattggag |
1396 |
T |
|
| Q |
101 |
gag |
103 |
Q |
| |
|
||| |
|
|
| T |
1397 |
gag |
1399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0308 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0308
Description:
Target: scaffold0308; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 16439 - 16525
Alignment:
| Q |
149 |
ttatgttgtaataaaaagtgtaagagaccaattttggcccaaaaacactaagtgtggttattttgtgtgtttaatccattttaaagctt |
237 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||| ||||| ||||||||||||| || | | | |||||||| |||||||||||||||| |
|
|
| T |
16439 |
ttatgttgtaataaaa-gtgtaaggaaccaattatggcc-aaaaacactaagtttgaatttatagtgtgttttatccattttaaagctt |
16525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0034 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0034
Description:
Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 84570 - 84492
Alignment:
| Q |
63 |
tggaggataaaatggtcatgtgcatcaaaccattggaggaggggtggggcgcatctcttgctgcccattttatttagtt |
141 |
Q |
| |
|
||||||| |||||||||| |||||||||||||| || || |||| |||||||| | |||| | |||||||||||||| |
|
|
| T |
84570 |
tggaggacaaaatggtcaattgcatcaaaccattcgaagatgggttgggcgcatgccatgctcctcattttatttagtt |
84492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University