View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14379_high_10 (Length: 340)
Name: NF14379_high_10
Description: NF14379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14379_high_10 |
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Alignment Details
Target: chr6 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 16 - 321
Target Start/End: Original strand, 10957632 - 10957937
Alignment:
| Q |
16 |
cacttctaaataataaatcaccatattttattttgcccaacaaacaccctcaccttcatgaactaaaaatcattggatcagtgttatccgtccactttac |
115 |
Q |
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| T |
10957632 |
cacttctaaataataaatcaccatattttattttgcccaacaaacaccctcaccttcatgaactaaaaatctttggatcagtgttatccgtccactttac |
10957731 |
T |
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| Q |
116 |
acatccacataaggaagcttgaaccaaaagccagaaaatatattttcttgggttacaaggcatgaatgaaaggtgatatatttcatgacctcaacaatat |
215 |
Q |
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| T |
10957732 |
acatccacataaggaagcttgaaccaaaagccagaaaatatattttcttgggttacaaggcatgaatgaaaggtgatatatttcatgacctcaacaatat |
10957831 |
T |
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| Q |
216 |
ataagacatttttatttcaagagatgtcacatatcatgaacatatcttaccttatcatgatatagatcctacattaatttggacctatcactcatcaaaa |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10957832 |
ataagacatttttatttcaagagatgtcacatatcatgaacatatcttaccttatcatgatatagatcctacattaatttggacctatcactcatcaaaa |
10957931 |
T |
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| Q |
316 |
ccctcc |
321 |
Q |
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|||||| |
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| T |
10957932 |
ccctcc |
10957937 |
T |
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