View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14379_high_2 (Length: 715)
Name: NF14379_high_2
Description: NF14379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14379_high_2 |
 |  |
|
| [»] scaffold0074 (1 HSPs) |
 |  |  |
|
| [»] scaffold0171 (2 HSPs) |
 |  |  |
|
| [»] scaffold0362 (1 HSPs) |
 |  |  |
|
| [»] scaffold0386 (2 HSPs) |
 |  |  |
|
| [»] scaffold0108 (1 HSPs) |
 |  |  |
|
| [»] scaffold0103 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 523; Significance: 0; HSPs: 16)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 523; E-Value: 0
Query Start/End: Original strand, 16 - 636
Target Start/End: Original strand, 6177894 - 6178520
Alignment:
| Q |
16 |
cctgtgaagaccaaaaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatcagaaactccacaacaaataaggaggaaaaa |
115 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||| |
|
|
| T |
6177894 |
cctgtgaagacaaaaaacttactactttgttacttgttacgatttgatgcacttgtcaatttgatccatcagaaatcccacaacaaataaggaagaaaaa |
6177993 |
T |
 |
| Q |
116 |
accacaaggtatgtaagagtagataacttttattaagtgggagaaattacaaaacctctctaaataaaagcatagacaagttaccttctctcttgaaata |
215 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6177994 |
accacaaggtatgtaagagtagataaattttattaagtgggagaaattacaaaacctctctaaataaaagcatagacaagttaccttctctcttgaaata |
6178093 |
T |
 |
| Q |
216 |
gagaaatactaacaccagatgaaaccttacaggagaaactctatttccttcctgtatttttcgctcactctccataaactctaattcttattgttgtatt |
315 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |
|
|
| T |
6178094 |
gagaaatactaacaccagaggaaaccttacaggagaaactctatttccttcctgtatttttcgctcactctccataaactctaattcttgttgttgtgtt |
6178193 |
T |
 |
| Q |
316 |
actattttatgggatgattgaaatggtgcaaataaacttgatttataggagaggtaaacaatagttccttac----agcaagacacttgtctttcatgca |
411 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
6178194 |
actattttatgggatgattgaaatggtgcaaataaacttgatttataggagaggtaaacaatagttccttacatatagcaagacacttgtctttcatgca |
6178293 |
T |
 |
| Q |
412 |
aaacttttggttaaatcttattaatctttagtaccctttaaaaagattttataaaaatgtcataagaattggataaagg--nnnnnnnntagtttgaatt |
509 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
6178294 |
aaacatttggttaaatcttattaatctttagtaccctttaaaaagattttataaaaatgtcataagaattggataagggaaaaaaaaaatagtttgaatt |
6178393 |
T |
 |
| Q |
510 |
atagaagatgctcatcaaagacaagaaatctttcattgttcttgaatgttggtcatatgttggaaatattagcttgattgttaaggatcaagaatggatg |
609 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |
|
|
| T |
6178394 |
atagaagatgctcatcaaagacaagaaatctttcattgttcttgaatgttggtcatatgttggaagtattagcttgattgttaaggattaagaatggatg |
6178493 |
T |
 |
| Q |
610 |
aaattctttcattgaacttcaatagat |
636 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
6178494 |
aaattctttcattgaacttcaatagat |
6178520 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 28 - 311
Target Start/End: Original strand, 6174074 - 6174357
Alignment:
| Q |
28 |
aaaaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatcagaaactccacaacaaataaggaggaaaaaaccacaaggtat |
127 |
Q |
| |
|
||||||||| ||||||| ||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||||||||| ||||||| ||| ||||| |
|
|
| T |
6174074 |
aaaaacttagtactttgctactttttacgatttgatgcacttgccaatttgatccatcagaaatcccacaacaaataaggaagaaaaaatcacggggtat |
6174173 |
T |
 |
| Q |
128 |
gtaagagtagataacttttattaagtgggagaaattacaaaacctctctaaataaaagcatagac-aagttaccttctctcttgaaatagagaaatacta |
226 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||||||| ||||||||||||| ||| | || | ||||||||||||||||||||||| |||||||||| |
|
|
| T |
6174174 |
gtaagagta-ataactttcattaagtgggagaaattacaagacctctctaaatacaagtagaggcaaagttaccttctctcttgaaataaagaaatacta |
6174272 |
T |
 |
| Q |
227 |
acaccagatgaaaccttacaggagaaactctatttccttcctgtatttttcgctcactctccataaactctaattcttattgttg |
311 |
Q |
| |
|
| || ||| ||| ||||| |||||||||| ||||||||| || |||||||| |||||| ||| || ||||||||||| |||||| |
|
|
| T |
6174273 |
aaactagaagaatccttataggagaaactatatttcctttctatatttttctctcactatccgcaagctctaattcttgttgttg |
6174357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 415
Target Start/End: Original strand, 6174556 - 6174656
Alignment:
| Q |
324 |
atgggatgattgaaatggtgcaaataaacttgat--ttataggagaggtaaacaatagt---tccttaca----gcaagacacttgtctttcatgcaaaa |
414 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||| |||||||||||| |
|
|
| T |
6174556 |
atgggatgattgaaatggtgcaaataaacttgatatttataggagaggtaaacaatagtagttccttacatatagcaagccacttgtgtttcatgcaaaa |
6174655 |
T |
 |
| Q |
415 |
c |
415 |
Q |
| |
|
| |
|
|
| T |
6174656 |
c |
6174656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 130 - 388
Target Start/End: Original strand, 23012623 - 23012889
Alignment:
| Q |
130 |
aagagtagataacttttattaagtgggagaaattacaaaacctctctaaataaaagcatagacaagttac---ct-tctctcttgaaatagagaaatact |
225 |
Q |
| |
|
||||||||| |||||| | |||||| |||||||| ||| |||||| |||||| || | |||||| |||| || |||||||||||||| | |||||| |
|
|
| T |
23012623 |
aagagtagagaactttcactaagtgagagaaatttcaagacctctttaaatacaatgagagacaaattactctctctctctcttgaaatatgggaatact |
23012722 |
T |
 |
| Q |
226 |
aacaccagatgaaaccttacaggagaaactctatttccttcctgtatttttcgctc--actctccataaactctaattcttattgttgtattactatttt |
323 |
Q |
| |
|
| ||| | |||||||||||| ||| ||| ||||||||| || ||||||| ||| |||||| | || ||||||||||| ||||||| |||| | || |
|
|
| T |
23012723 |
agcacttggagaaaccttacagaagagactatatttcctttctatatttttttctctaactctcaacaagctctaattcttgttgttgtgttacaacttg |
23012822 |
T |
 |
| Q |
324 |
atgggatgattgaaatggtgcaaataaacttg--atttataggagaggtaaacaatagttccttaca |
388 |
Q |
| |
|
|||||||||| ||||||||||||| | |||| ||||||| ||||||||| | ||| ||||||||| |
|
|
| T |
23012823 |
atgggatgataaaaatggtgcaaatgatcttggtatttataagagaggtaatccatatttccttaca |
23012889 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 556 - 614
Target Start/End: Original strand, 6171979 - 6172037
Alignment:
| Q |
556 |
tgttggtcatatgttggaaatattagcttgattgttaaggatcaagaatggatgaaatt |
614 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
6171979 |
tgttggtcatatgttggaaaaattagtttgattgttaaggattaagaatggatgaaatt |
6172037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 18968070 - 18967864
Alignment:
| Q |
130 |
aagagtagataacttttattaagtgggaga-aattacaaaac--ctctctaaataaaagcatagacaagttaccttctctcttgaaatagagaaatacta |
226 |
Q |
| |
|
||||||||| |||||| | ||||||| ||| |||||||| || ||||||||||| ||| | |||||| ||| | |||||| |||||||| ||||||| |
|
|
| T |
18968070 |
aagagtagaaaactttcactaagtggaagacaattacaagacttctctctaaatacaaggagagacaaattagcctctctcatgaaataggagaatacta |
18967971 |
T |
 |
| Q |
227 |
acaccagatgaaaccttacaggagaaactctatttccttcctgtattttt-cgctcactctccataaactctaattcttattgttgtattactattttat |
325 |
Q |
| |
|
|||| || ||||||| ||| |||||||| |||||||| | ||||||| | ||||||||| | || ||||||||||| ||||||| |||||| || || |
|
|
| T |
18967970 |
acactaggagaaacctcacaagagaaactatatttcctctttatatttttcctctcactctcaacaagctctaattcttgttgttgtgttactacttgat |
18967871 |
T |
 |
| Q |
326 |
gggatga |
332 |
Q |
| |
|
| ||||| |
|
|
| T |
18967870 |
gtgatga |
18967864 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 13782414 - 13782470
Alignment:
| Q |
31 |
aacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatcag |
87 |
Q |
| |
|
||||||||||||| ||| ||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
13782414 |
aacttactactttattaattgttacgatttggtgcacttgtcaatttcgtccatcag |
13782470 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 13789736 - 13789792
Alignment:
| Q |
31 |
aacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatcag |
87 |
Q |
| |
|
||||||||||||| ||| ||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
13789736 |
aacttactactttattaattgttacgatttggtgcacttgtcaatttcgtccatcag |
13789792 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 13803991 - 13804047
Alignment:
| Q |
31 |
aacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatcag |
87 |
Q |
| |
|
||||||||||||| ||| ||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
13803991 |
aacttactactttattaattgttacgatttggtgcacttgtcaatttcgtccatcag |
13804047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 15576197 - 15576253
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
15576197 |
aaactgactactttattacttgttacgatttgatgcacttgccaatttcgtccatca |
15576253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 13194289 - 13194341
Alignment:
| Q |
34 |
ttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||| ||||||| ||||||| |
|
|
| T |
13194289 |
ttactactttattacttgttacgatttggtgcacttgccaatttcgtccatca |
13194341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 17858993 - 17858937
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||| |||||||||| ||||||| |
|
|
| T |
17858993 |
aaacttactacttaattacttgttactatttgatgcacatgtcaatttcgtccatca |
17858937 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 6091976 - 6091919
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatcag |
87 |
Q |
| |
|
|||||| ||||||| ||| || ||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
6091976 |
aaactttctactttattattttttacgatttaatgcacttgtcaatttcgtccatcag |
6091919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 22727250 - 22727303
Alignment:
| Q |
34 |
ttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatcag |
87 |
Q |
| |
|
|||||||||| ||||||||||| ||||| ||||||||||||||| |||||||| |
|
|
| T |
22727250 |
ttactactttattacttgttacaatttggtgcacttgtcaattttgtccatcag |
22727303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 9395476 - 9395432
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaa |
74 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
9395476 |
aaacttactacttcattacttgttacgatttgttgcacttgtcaa |
9395432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 8037052 - 8037097
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaat |
75 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||||||| |||| |
|
|
| T |
8037052 |
aaacttactactttattacttgttacgatttagtgcacttgccaat |
8037097 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 130 - 388
Target Start/End: Original strand, 27350 - 27618
Alignment:
| Q |
130 |
aagagtagataacttttattaagtgggaga-aattacaaaac--ctctctaaataaaagcatagacaagttaccttctctcttgaaatagagaaatacta |
226 |
Q |
| |
|
||||||||| |||||| | ||||||| ||| |||||||| || ||||||||||| ||| | |||||| ||||| ||||||||||||||| ||||||| |
|
|
| T |
27350 |
aagagtagagaactttcactaagtggaagacaattacaatacttctctctaaatacaaggagagacaaattaccatctctcttgaaataggtgaatacta |
27449 |
T |
 |
| Q |
227 |
acaccagatgaaaccttacaggagaaactctatttccttcctgtattttt-cgctcactctccataaactctaattcttattgttgtattactattttat |
325 |
Q |
| |
|
|||| || ||||||| |||||||||||| |||||||| || ||||||| | ||||||||| | || ||||||||||| ||||||| ||||||||| || |
|
|
| T |
27450 |
acactaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcactctcaacaagctctaattcttgttgttgtgttactatttgat |
27549 |
T |
 |
| Q |
326 |
gggatga-ttgaaatg---gtgcaaataaacttg--atttataggagaggtaaacaatagttccttaca |
388 |
Q |
| |
|
| ||||| ||| ||| |||||||| |||||| ||||||||||||||||| | |||||||||||| |
|
|
| T |
27550 |
gtgatgagatgagatgattgtgcaaatgaacttgctatttataggagaggtaagccttagttccttaca |
27618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 61; Significance: 8e-26; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 133 - 332
Target Start/End: Complemental strand, 10427470 - 10427267
Alignment:
| Q |
133 |
agtagataacttttattaagtgggaga-aattacaaaac--ctctctaaataaaagcatagacaagttaccttctctcttgaaatagagaaatactaaca |
229 |
Q |
| |
|
||||||||||||| | ||||||| ||| |||||||| || ||||||||||| ||| | |||||| ||||| ||||||||||||||| |||||||||| |
|
|
| T |
10427470 |
agtagataactttcactaagtggaagacaattacaagacttctctctaaatacaaggagagacaaattaccctctctcttgaaataggagaatactaaca |
10427371 |
T |
 |
| Q |
230 |
ccagatgaaaccttacaggagaaactctatttccttcctgtattttt-cgctcactctccataaactctaattcttattgttgtattactattttatggg |
328 |
Q |
| |
|
| || ||||||| |||||||||||| |||||||| || ||||||| | ||||||||| | || ||||||||||| ||||||| |||||| || ||| | |
|
|
| T |
10427370 |
ctaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcactctcaacaagctctaattcttgttgttgtgttactacttgatgtg |
10427271 |
T |
 |
| Q |
329 |
atga |
332 |
Q |
| |
|
|||| |
|
|
| T |
10427270 |
atga |
10427267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 30797708 - 30797754
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatt |
76 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
30797708 |
aaacttactactttattacttgttacgatttgatgcacttgccaatt |
30797754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 10450354 - 10450301
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatcca |
83 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||| |||||||| |||||||||||| |
|
|
| T |
10450354 |
aaacttactactttattatttgttacgatttggtgcacttgccaatttcatcca |
10450301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 13553513 - 13553465
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttc |
78 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||| |||||||||||||| |
|
|
| T |
13553513 |
aaacttactactttattacttattacgatttgatacacttgtcaatttc |
13553465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 20717947 - 20717995
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttc |
78 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||| ||||||| |
|
|
| T |
20717947 |
aaacttactactttattacttgttacgatttggtgcacttgccaatttc |
20717995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 22219953 - 22220009
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||| |
|
|
| T |
22219953 |
aaacttactactttattacttgttatgatttagtgcacttgtcaatttcgtccatca |
22220009 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 25367735 - 25367780
Alignment:
| Q |
31 |
aacttactactttgttacttgttacgatttgatgcacttgtcaatt |
76 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| |||||||||||||| |
|
|
| T |
25367735 |
aacttactactttattacttgtttcgatttggtgcacttgtcaatt |
25367780 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 47023608 - 47023560
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttc |
78 |
Q |
| |
|
||||||||||| || |||||||||||||||||||| ||||| ||||||| |
|
|
| T |
47023608 |
aaacttactaccttattacttgttacgatttgatgtacttgccaatttc |
47023560 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 7023079 - 7023034
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaat |
75 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||| ||||||| ||||| |
|
|
| T |
7023079 |
aaacttactactttattatttgttacgatttggtgcacttatcaat |
7023034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 12805824 - 12805767
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatcag |
87 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||| || ||||||| | |||||| |
|
|
| T |
12805824 |
aaacttactactttattacttgttacgatttggtgcatttaccaatttcgttcatcag |
12805767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 33520225 - 33520286
Alignment:
| Q |
31 |
aacttactactttgttacttgt-tacgatttgatgcacttgtcaatttcatccatcagaaac |
91 |
Q |
| |
|
||||||||||||| ||||||| ||||||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
33520225 |
aacttactactttactacttgtctacgatttgatccacttaccaattccatccatcagaaac |
33520286 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 60; Significance: 3e-25; HSPs: 21)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 16183755 - 16183961
Alignment:
| Q |
130 |
aagagtagataacttttattaagtgggaga-aattacaaaacctct--ctaaataaaagcatagacaagttaccttctctcttgaaatagagaaatacta |
226 |
Q |
| |
|
||||||||| |||||| | ||||||| ||| |||||||| |||||| ||||||| ||| | |||||| ||||| ||||||||||||||| ||||||| |
|
|
| T |
16183755 |
aagagtagagaactttcactaagtggaagacaattacaagacctctctctaaatacaaggagagacaaattaccctctctcttgaaataggagaatacta |
16183854 |
T |
 |
| Q |
227 |
acaccagatgaaaccttacaggagaaactctatttccttcctgtattttt-cgctcactctccataaactctaattcttattgttgtattactattttat |
325 |
Q |
| |
|
|||| || ||||||| |||||||||||| |||||||| || ||||||| | ||||||||| | || ||||||||||| ||||||| |||||| || || |
|
|
| T |
16183855 |
acactaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcactctcaacaagctctaattcttgttgttgtgttactacttgat |
16183954 |
T |
 |
| Q |
326 |
gggatga |
332 |
Q |
| |
|
| ||||| |
|
|
| T |
16183955 |
gtgatga |
16183961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 7143582 - 7143638
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
7143582 |
aaacttgctactttattacttgttacgatttggtgcacttgtcaatttcatccatca |
7143638 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 2352188 - 2352143
Alignment:
| Q |
31 |
aacttactactttgttacttgttacgatttgatgcacttgtcaatt |
76 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
2352188 |
aacttactactttattacttgttacgatttgatgcacttgtcaatt |
2352143 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 21544736 - 21544680
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||| ||||||| ||||||| |
|
|
| T |
21544736 |
aaacttactactttattacttgttacgatttggtgcacttgccaatttcgtccatca |
21544680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 7152127 - 7152173
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatt |
76 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
7152127 |
aaacttactactttattacttgttacgatttggtgcacttgtcaatt |
7152173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 7494499 - 7494556
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatcag |
87 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||| |||||||| ||||||| |||||||| |
|
|
| T |
7494499 |
aaacttactaatttattacttgttacgatttggtgcacttgccaatttcgtccatcag |
7494556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 9687136 - 9687088
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttc |
78 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||| |||||||||||||| |
|
|
| T |
9687136 |
aaacttactactttattacttattacgatttgatacacttgtcaatttc |
9687088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 18497205 - 18497248
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtca |
73 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
18497205 |
aaacttactacattgttacttgttacgatttggtgcacttgtca |
18497248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 4091404 - 4091354
Alignment:
| Q |
28 |
aaaaacttactactttgttacttgttacgatttgatgcacttgtcaatttc |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| | |||||| ||||||| |
|
|
| T |
4091404 |
aaaaacttactactttattacttgttacgatttggtacacttgccaatttc |
4091354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 9071398 - 9071436
Alignment:
| Q |
28 |
aaaaacttactactttgttacttgttacgatttgatgca |
66 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
9071398 |
aaaaacttactacttttttacttgttacgatttgatgca |
9071436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 7325871 - 7325834
Alignment:
| Q |
39 |
actttgttacttgttacgatttgatgcacttgtcaatt |
76 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
7325871 |
actttattacttgttacgatttgatgcacttgtcaatt |
7325834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 14074479 - 14074548
Alignment:
| Q |
18 |
tgtgaagaccaaaaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatcag |
87 |
Q |
| |
|
||||||||| | |||||||||||||| |||||||||||||||| ||||||| || |||| |||||||| |
|
|
| T |
14074479 |
tgtgaagacgataaacttactactttattacttgttacgattttgtgcactttccagtttcgtccatcag |
14074548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 14384507 - 14384576
Alignment:
| Q |
18 |
tgtgaagaccaaaaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatcag |
87 |
Q |
| |
|
||||||||| | |||||||||||||| |||||||||||||||| ||||||| || |||| |||||||| |
|
|
| T |
14384507 |
tgtgaagacgataaacttactactttattacttgttacgattttgtgcactttccagtttcgtccatcag |
14384576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 3401086 - 3401130
Alignment:
| Q |
34 |
ttactactttgttacttgttacgatttgatgcacttgtcaatttc |
78 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
3401086 |
ttactactttattacttgttacgattttgtgcacttgtcaatttc |
3401130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 7776407 - 7776367
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttg |
70 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
7776407 |
aaacttactactttgttacttgttaagatttggtgcacttg |
7776367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 18494611 - 18494563
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttc |
78 |
Q |
| |
|
||||||||||| || ||||||||||||||||| |||||||| ||||||| |
|
|
| T |
18494611 |
aaacttactaccttattacttgttacgatttggtgcacttgccaatttc |
18494563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 3094189 - 3094236
Alignment:
| Q |
37 |
ctactttgttacttgttacgatttgatgcacttgtcaatttcatccat |
84 |
Q |
| |
|
||||||| ||||||||||||||||| ||| |||||||||||| ||||| |
|
|
| T |
3094189 |
ctactttattacttgttacgatttggtgctcttgtcaatttcctccat |
3094236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 5102715 - 5102749
Alignment:
| Q |
130 |
aagagtagataacttttattaagtgggagaaatta |
164 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |
|
|
| T |
5102715 |
aagagtagataacttttactaagtgggagaaatta |
5102749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 415
Target Start/End: Original strand, 5102860 - 5103002
Alignment:
| Q |
279 |
ctcactctccataaactctaattcttattgttgtattactattttatgggatgattgaaatggtgcaaataaact--tgatttataggagaggtaaacaa |
376 |
Q |
| |
|
||||||||| | | ||||||||| || ||||||| |||||| || ||| ||| ||||||||||||||||| || | | |||||||||| ||||||| | |
|
|
| T |
5102860 |
ctcactctctagagactctaattattgttgttgtgttactacttgatgagataattgaaatggtgcaaatgaaatgattatttataggatgggtaaacca |
5102959 |
T |
 |
| Q |
377 |
tagttcct----tacagcaagacacttgtctttcatgcaaaac |
415 |
Q |
| |
|
| ||| || | || |||| ||||||||||||||||||||| |
|
|
| T |
5102960 |
ttgtttcttgcatgcaacaagccacttgtctttcatgcaaaac |
5103002 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 10925081 - 10925122
Alignment:
| Q |
31 |
aacttactactttgttacttgttacgatttgatgcacttgtc |
72 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||||||||| |
|
|
| T |
10925081 |
aacttactactttattacttgatacgatttggtgcacttgtc |
10925122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 11466952 - 11466915
Alignment:
| Q |
35 |
tactactttgttacttgttacgatttgatgcacttgtc |
72 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
11466952 |
tactactttattacttcttacgatttgatgcacttgtc |
11466915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 60; Significance: 3e-25; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 46191424 - 46191218
Alignment:
| Q |
130 |
aagagtagataacttttattaagtgggaga-aattacaaaac--ctctctaaataaaagcatagacaagttaccttctctcttgaaatagagaaatacta |
226 |
Q |
| |
|
||||||||| |||||| | ||||||| ||| |||||||| || ||||||||||| ||| | |||||| ||||| ||||||||||||||| ||||||| |
|
|
| T |
46191424 |
aagagtagagaactttcactaagtggaagacaattacaagacttctctctaaatagaaggagagacaaattaccctctctcttgaaataggagaatacta |
46191325 |
T |
 |
| Q |
227 |
acaccagatgaaaccttacaggagaaactctatttccttcctgtattttt-cgctcactctccataaactctaattcttattgttgtattactattttat |
325 |
Q |
| |
|
|||| || ||||||| |||||||||||| |||||||| || ||||||| | ||||||||| | || ||||||||||| ||||||| |||||| || || |
|
|
| T |
46191324 |
acactaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcactctcaacaagctctaattcttgttgttgtgttactacttgat |
46191225 |
T |
 |
| Q |
326 |
gggatga |
332 |
Q |
| |
|
|||||| |
|
|
| T |
46191224 |
tggatga |
46191218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 27682937 - 27682993
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
|||||||||||||| |||||||||||| |||| |||||||||||||||| ||||||| |
|
|
| T |
27682937 |
aaacttactactttattacttgttacggtttggtgcacttgtcaatttcgtccatca |
27682993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 34522128 - 34522184
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||| |||||||| ||||||| ||||||| |
|
|
| T |
34522128 |
aaacttactattttattacttgttacgatttggtgcacttgccaatttcttccatca |
34522184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 50048254 - 50048310
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||||||| ||||||| ||||||| |
|
|
| T |
50048254 |
aaacttactactttattacttgttataatttgatgcacttgccaatttcgtccatca |
50048310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 17836845 - 17836791
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccat |
84 |
Q |
| |
|
|||||||||||||| |||||||||| |||||| |||||||| ||||||| ||||| |
|
|
| T |
17836845 |
aaacttactactttcttacttgttatgatttggtgcacttgccaatttcgtccat |
17836791 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 230
Target Start/End: Complemental strand, 4130278 - 4130175
Alignment:
| Q |
130 |
aagagtagataacttttattaagtgggaga-aattacaaaac--ctctctaaataaaagcatagacaagttaccttctctcttgaaatagagaaatacta |
226 |
Q |
| |
|
||||||||| |||||| | ||||||| ||| |||||||| || ||||||||||| ||| | |||||| ||||| ||||||||||||||| ||||||| |
|
|
| T |
4130278 |
aagagtagagaactttcactaagtggaagataattacaagacttctctctaaatacaaggagagacaaattaccctctctcttgaaataggacaatacta |
4130179 |
T |
 |
| Q |
227 |
acac |
230 |
Q |
| |
|
|||| |
|
|
| T |
4130178 |
acac |
4130175 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 23224632 - 23224680
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttc |
78 |
Q |
| |
|
||||||||||| || |||||||||||||||||| ||||||| ||||||| |
|
|
| T |
23224632 |
aaacttactaccttattacttgttacgatttgacgcacttgccaatttc |
23224680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 11768939 - 11768885
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccat |
84 |
Q |
| |
|
|||||||||||||| || ||| ||||||||||||||||||| ||||| |||||| |
|
|
| T |
11768939 |
aaacttactactttattccttattacgatttgatgcacttgcaaattttatccat |
11768885 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 30676679 - 30676729
Alignment:
| Q |
34 |
ttactactttgttacttgttacgatttgatgcacttgtcaatttcatccat |
84 |
Q |
| |
|
|||||||||| ||||||||||||||||| || ||||||||| ||| ||||| |
|
|
| T |
30676679 |
ttactactttattacttgttacgatttggtgaacttgtcaagttcgtccat |
30676729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 23420530 - 23420485
Alignment:
| Q |
31 |
aacttactactttgttacttgttacgatttgatgcacttgtcaatt |
76 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | |||||| ||||| |
|
|
| T |
23420530 |
aacttactactttattacttgttacgatttggtacacttgccaatt |
23420485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 51; Significance: 7e-20; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 171 - 332
Target Start/End: Original strand, 24671187 - 24671349
Alignment:
| Q |
171 |
ctctctaaataaaagcatagacaagttaccttctctcttgaaatagagaaatactaacaccagatgaaaccttacaggagaaactctatttccttcctgt |
270 |
Q |
| |
|
||||||||||| ||| | |||||| ||||| ||||||||||||||| ||||||||||| || ||||||| |||||||||||| |||||||| || | |
|
|
| T |
24671187 |
ctctctaaatacaaggagagacaaattaccctctctcttgaaataggagaatactaacactaggagaaacctcacaggagaaactatatttcctctctat |
24671286 |
T |
 |
| Q |
271 |
attttt-cgctcactctccataaactctaattcttattgttgtattactattttatgggatga |
332 |
Q |
| |
|
|||||| | ||||||||| | || |||||| |||| ||||||| |||||| || ||| ||||| |
|
|
| T |
24671287 |
atttttcctctcactctcaacaagctctaactcttgttgttgtgttactaattgatgtgatga |
24671349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 171 - 332
Target Start/End: Complemental strand, 4579240 - 4579078
Alignment:
| Q |
171 |
ctctctaaataaaagcatagacaagttaccttctctcttgaaatagagaaatactaacaccagatgaaaccttacaggagaaactctatttccttcctgt |
270 |
Q |
| |
|
||||||||||| ||| | |||||| ||||| |||||| |||||||| ||||||||| | | ||||||| |||||||||||| |||||||| || | |
|
|
| T |
4579240 |
ctctctaaatacaaggagagacaaattaccctctctcgtgaaataggagaatactaactctatgagaaacctcacaggagaaactatatttcctctctat |
4579141 |
T |
 |
| Q |
271 |
atttttcg-ctcactctccataaactctaattcttattgttgtattactattttatgggatga |
332 |
Q |
| |
|
||||||| ||||||||| | || ||||||||||| ||||||| |||||| || ||| ||||| |
|
|
| T |
4579140 |
atttttcctctcactctcaacaagctctaattcttgttgttgtgttactacttgatgtgatga |
4579078 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 412
Target Start/End: Original strand, 31204893 - 31205179
Alignment:
| Q |
133 |
agtagataacttttattaagtgggagaaattacaaaacctctctaaataaaagcatagacaagttaccttctctctt-gaaata-gagaaatactaacac |
230 |
Q |
| |
|
|||||| |||||| | ||||||||| ||||||||||||||||||||||| ||| | ||||||||| | ||||| || |||||| ||| ||||||||||| |
|
|
| T |
31204893 |
agtagagaactttcactaagtgggaaaaattacaaaacctctctaaatataaggagagacaagtttc--tctctattcgaaatatgag-aatactaacac |
31204989 |
T |
 |
| Q |
231 |
cagatgaaaccttacaggagaaactctatttccttcctgtatttt--tcgctcactctccataaactctaattcttattgttgtattactattttatggg |
328 |
Q |
| |
|
| | ||||||||| |||||||||| ||| | | || |||||| || |||| ||| | || ||||||||||| ||||||| ||| || | ||||| |
|
|
| T |
31204990 |
cgaaagaaaccttataggagaaactatatgccatctctatatttttctctctcattctttagaagctctaattcttgttgttgtgttaatacataatggg |
31205089 |
T |
 |
| Q |
329 |
atgattgaaatggtgcaaataaacttg--atttataggagaggtaaacaatagttcctta----cagcaagacacttgtctttcatgcaa |
412 |
Q |
| |
|
|||||||||| | |||||| | |||| |||||||||| |||||| ||||||||||| || |||| |||||||||| ||||||| |
|
|
| T |
31205090 |
atgattgaaaggatgcaaacgagcttgctatttataggaaaggtaagtcatagttccttatatgcaacaagccacttgtcttccatgcaa |
31205179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 314 - 414
Target Start/End: Original strand, 34489587 - 34489693
Alignment:
| Q |
314 |
ttactattttatgggatgattgaaatggtgcaaataaacttg--atttataggagaggtaaacaatagttcctta----cagcaagacacttgtctttca |
407 |
Q |
| |
|
|||||| || ||||||||| |||||||||| |||| |||||| ||||||| |||||||||||||| |||||||| || |||| |||||||||| || |
|
|
| T |
34489587 |
ttactacttgatgggatgaatgaaatggtggaaatgaacttgctatttataagagaggtaaacaatggttccttacatgcaacaagccacttgtcttcca |
34489686 |
T |
 |
| Q |
408 |
tgcaaaa |
414 |
Q |
| |
|
||||||| |
|
|
| T |
34489687 |
tgcaaaa |
34489693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 25918152 - 25918085
Alignment:
| Q |
20 |
tgaagaccaaaaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatcag |
87 |
Q |
| |
|
||||||| | ||||||||||| || ||||||||||| ||||| ||||||||||||||| |||||||| |
|
|
| T |
25918152 |
tgaagacgataaacttactacgttattacttgttacaatttggtgcacttgtcaattttttccatcag |
25918085 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 379
Target Start/End: Original strand, 34469904 - 34470012
Alignment:
| Q |
273 |
ttttcgctcactctccataaactctaattcttattgttgtattactattttatgggatgattgaaatggtgcaaataaacttg--atttataggagaggt |
370 |
Q |
| |
|
||||| || |||||| | || |||||||| || ||||||| |||||| || || |||||| |||||| |||||||| ||||| ||||||||||||||| |
|
|
| T |
34469904 |
ttttctcttactctcaacaagctctaattgttgttgttgtgttactacttgatcggatgaatgaaattgtgcaaatgaactttctatttataggagaggt |
34470003 |
T |
 |
| Q |
371 |
aaacaatag |
379 |
Q |
| |
|
|||| |||| |
|
|
| T |
34470004 |
aaaccatag |
34470012 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 273 - 415
Target Start/End: Original strand, 27630395 - 27630543
Alignment:
| Q |
273 |
ttttcgctcactctccataaactctaattcttattgttgtattactattttatgggatgattgaaatggtgcaaataaacttg--atttataggagaggt |
370 |
Q |
| |
|
||||| ||||||||| | || |||||| | || |||||| || ||| || ||||||||| |||| ||||| |||| |||||| ||||||| ||||||| |
|
|
| T |
27630395 |
ttttctctcactctcaacaagctctaaatgtttttgttgcgttgctacttgatgggatgaatgaagtggtggaaatgaacttgctatttataagagaggt |
27630494 |
T |
 |
| Q |
371 |
aaacaatagttcctta----cagcaagacacttgtctttcatgcaaaac |
415 |
Q |
| |
|
|||| |||||| |||| || |||| |||||||||| |||||||||| |
|
|
| T |
27630495 |
aaactatagtttcttacatgcaacaagccacttgtcttccatgcaaaac |
27630543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 8839674 - 8839717
Alignment:
| Q |
31 |
aacttactactttgttacttgttacgatttgatgcacttgtcaa |
74 |
Q |
| |
|
||||||||||||| |||||| ||||| ||||||||||||||||| |
|
|
| T |
8839674 |
aacttactactttattacttattacgttttgatgcacttgtcaa |
8839717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 26419997 - 26420042
Alignment:
| Q |
31 |
aacttactactttgttacttgttacgatttgatgcacttgtcaatt |
76 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||| |||||| ||||| |
|
|
| T |
26419997 |
aacttactattttattacttgttacgatttgattcacttgccaatt |
26420042 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 33913449 - 33913400
Alignment:
| Q |
34 |
ttactactttgttacttgttacgatttgatgcacttgtcaatttcatcca |
83 |
Q |
| |
|
|||||||||| ||||||||||| ||||| |||||||| ||||||| |||| |
|
|
| T |
33913449 |
ttactactttattacttgttacaatttggtgcacttgccaatttcgtcca |
33913400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0171 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0171
Description:
Target: scaffold0171; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 7365 - 7423
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatcaga |
88 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
7365 |
aaacttactactttattacttgttacgatttggtgcacttgtcaatttcgtccatcaga |
7423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0171; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 22566 - 22626
Alignment:
| Q |
20 |
tgaagaccaaaaacttactactttgttacttgttacgatttgatgcacttgtcaatttcat |
80 |
Q |
| |
|
||||||| | ||| |||||||||| ||||||||||| || ||||||||||| ||||||||| |
|
|
| T |
22566 |
tgaagacaataaatttactactttattacttgttacaatatgatgcacttgccaatttcat |
22626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 13803149 - 13803097
Alignment:
| Q |
34 |
ttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
13803149 |
ttactattttattacttgttacgatttgatgcacttgtcaatttcgtccatca |
13803097 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 12957567 - 12957620
Alignment:
| Q |
33 |
cttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
||||||||||| |||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
12957567 |
cttactactttattacttgttacgatttagtgcacttgtcaatttcgtccatca |
12957620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 26853617 - 26853673
Alignment:
| Q |
31 |
aacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatcag |
87 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||| || |||||||||||||||| |
|
|
| T |
26853617 |
aacttactactttattacttgttacgatttggtgcattttccaatttcatccatcag |
26853673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 32240454 - 32240510
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||| |||||||| |||||| ||||||| |
|
|
| T |
32240454 |
aaacttactactttattacttgttacaatttggtgcacttgccaattttgtccatca |
32240510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 28075666 - 28075721
Alignment:
| Q |
22 |
aagaccaaaaacttactactttgttacttgttacgatttgatgcacttgtcaattt |
77 |
Q |
| |
|
|||| ||| ||||||||||||| ||||||||||| ||||| || |||||||||||| |
|
|
| T |
28075666 |
aagaacaataacttactactttattacttgttacaatttggtgtacttgtcaattt |
28075721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 18790068 - 18790109
Alignment:
| Q |
31 |
aacttactactttgttacttgttacgatttgatgcacttgtc |
72 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||||||||| |
|
|
| T |
18790068 |
aacttactactttattacttgatacgatttggtgcacttgtc |
18790109 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 37; Significance: 0.00000000002; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 11273740 - 11273684
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||||||| |||||| ||||||| |
|
|
| T |
11273740 |
aaacttactactttattacttgttacaatttgatgcacttgccaattttgtccatca |
11273684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 16617503 - 16617447
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| ||||||||||| |||| ||||||| |
|
|
| T |
16617503 |
aaacttactactttattactagttacgatttggtgcacttgtcagtttcgtccatca |
16617447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 24518959 - 24519014
Alignment:
| Q |
31 |
aacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||||| || |||| ||||||| |
|
|
| T |
24518959 |
aacttactactttattacttgttacgatttgatacacttgccagtttcgtccatca |
24519014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 20715843 - 20715899
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
||||||||||| || |||||| |||| ||||| |||||||||||||||| ||||||| |
|
|
| T |
20715843 |
aaacttactaccttattacttattacaatttggtgcacttgtcaatttcgtccatca |
20715899 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 16621523 - 16621469
Alignment:
| Q |
32 |
acttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
|||||||| ||| ||||| ||||||||||| ||||||||||| |||| ||||||| |
|
|
| T |
16621523 |
acttactattttattactagttacgatttggtgcacttgtcagtttcgtccatca |
16621469 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 37; Significance: 0.00000000002; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 31000612 - 31000668
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||||||| |||||| ||||||| |
|
|
| T |
31000612 |
aaacttactactttattacttgttacaatttgatgcacttgcaaatttcgtccatca |
31000668 |
T |
 |
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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 41256265 - 41256207
Alignment:
| Q |
30 |
aaacttact-actttgttacttgttacgatttgatgcacttgtcaatttcatccatcag |
87 |
Q |
| |
|
||||||||| ||||| ||| ||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
41256265 |
aaacttacttactttattatttgttacgatttggtgcacttgtcaatttcgtccatcag |
41256207 |
T |
 |
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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 17496040 - 17495995
Alignment:
| Q |
31 |
aacttactactttgttacttgttacgatttgatgcacttgtcaatt |
76 |
Q |
| |
|
||||||||||| | ||||||||| ||||||| |||||||||||||| |
|
|
| T |
17496040 |
aacttactactatattacttgttccgatttggtgcacttgtcaatt |
17495995 |
T |
 |
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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 23854096 - 23854055
Alignment:
| Q |
34 |
ttactactttgttacttgttacgatttgatgcacttgtcaat |
75 |
Q |
| |
|
|||||||||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
23854096 |
ttactactttattacttgttatgatttggtgcacttgtcaat |
23854055 |
T |
 |
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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 27416124 - 27416083
Alignment:
| Q |
45 |
ttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||| ||||||| |
|
|
| T |
27416124 |
ttacttgttacgatttggtgcaattgtcaatttcgtccatca |
27416083 |
T |
 |
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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 264
Target Start/End: Original strand, 30397034 - 30397170
Alignment:
| Q |
131 |
agagtagataactttt-attaagtgggagaaattacaaaacctct--ctaaataaaagcatagacaagttaccttctctcttgaaatagagaaatactaa |
227 |
Q |
| |
|
|||||||| ||||||| | ||||||| ||||||||||| |||||| ||| ||| ||| | |||||| ||||| ||| | ||||||||| |||| ||| |
|
|
| T |
30397034 |
agagtagagaacttttcactaagtggaagaaattacaagacctctttctatatacaaggagagacaaattaccctctatgttgaaataggagaatattaa |
30397133 |
T |
 |
| Q |
228 |
caccagatgaaaccttacaggagaaactctatttcct |
264 |
Q |
| |
|
||| || |||| || |||||||||||| |||||||| |
|
|
| T |
30397134 |
cactaggagaaatctcacaggagaaactatatttcct |
30397170 |
T |
 |
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Target: scaffold0362 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0362
Description:
Target: scaffold0362; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 9971 - 10026
Alignment:
| Q |
34 |
ttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatcagaa |
89 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||| ||| ||||||||||||| |||| |
|
|
| T |
9971 |
ttactactttattacttgttacgatttggtgcatttgccaatttcatccattagaa |
10026 |
T |
 |
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Target: scaffold0386 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0386
Description:
Target: scaffold0386; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 7587 - 7539
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttc |
78 |
Q |
| |
|
|||||||||||||| |||||||||| |||||| |||||||||| ||||| |
|
|
| T |
7587 |
aaacttactactttattacttgttatgatttggtgcacttgtcgatttc |
7539 |
T |
 |
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Target: scaffold0386; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 10604 - 10553
Alignment:
| Q |
35 |
tactactttgttacttgttacgatttgatgcacttgtcaatttcatccatca |
86 |
Q |
| |
|
|||||| || |||||||||| |||||| |||||||||||||||| ||||||| |
|
|
| T |
10604 |
tactacattattacttgttatgatttggtgcacttgtcaatttcgtccatca |
10553 |
T |
 |
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Target: scaffold0108 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 9909 - 9964
Alignment:
| Q |
32 |
acttactactttgttacttgttacgatttgatgcacttgtcaatttcatccatcag |
87 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||| |||| ||||||||| |
|
|
| T |
9909 |
acttactactttattacttgttacaatttgatgcacttgcgaattctatccatcag |
9964 |
T |
 |
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Target: scaffold0103 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0103
Description:
Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 36548 - 36494
Alignment:
| Q |
30 |
aaacttactactttgttacttgttacgatttgatgcacttgtcaatttcatccat |
84 |
Q |
| |
|
|||||||||||||| ||||||||| |||||| |||||||| ||||||| ||||| |
|
|
| T |
36548 |
aaacttactactttattacttgttgtgatttggtgcacttgccaatttcgtccat |
36494 |
T |
 |
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