View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14380_low_8 (Length: 282)
Name: NF14380_low_8
Description: NF14380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14380_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 16 - 272
Target Start/End: Original strand, 32815832 - 32816088
Alignment:
| Q |
16 |
tgcataaaggaaatcgtgacaaataaaagaattttatagataggtacttttcatctttgtacacttatatagttatattattacactaggagctttccct |
115 |
Q |
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| T |
32815832 |
tgcataaaggaagtcgtgacaaataaaagaattttatagataggtacttttcatctttgtacacttatatagttatattattacactaggagctttccct |
32815931 |
T |
|
| Q |
116 |
tgaacgagctagaagggagaatgttctatggaccacaccacttgcaactttggcatgttgaatcatttaccattcttcattccacgtcttattggattcc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32815932 |
tgaacgagctagaagggagaatgttctatggaccacaccacttgcaactttggcatgttgaatcatttaccattcttcattccacgtcttattggattcc |
32816031 |
T |
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| Q |
216 |
aaagcaaatatgtccactctacatttccactttggggtaacctctctttatattctt |
272 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
32816032 |
aaagcaaatatgtccactctacatttccactttggggtaacctctctttattttctt |
32816088 |
T |
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