View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14381_high_16 (Length: 276)
Name: NF14381_high_16
Description: NF14381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14381_high_16 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 5 - 276
Target Start/End: Complemental strand, 50032232 - 50031961
Alignment:
| Q |
5 |
tgtcgaaaaatatacggtatagattcaaggaaacagtttgtttgagtccataaaaagggatcattttgtccaaaaattatatactcagttaaatgtgtta |
104 |
Q |
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| T |
50032232 |
tgtcaaaaaatatacggtatagattcaaggaaacagtttgtttgagtccataaaaagggatcattttgtcaaaaaattatatactcagttaaatgtgtta |
50032133 |
T |
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| Q |
105 |
tgggtgcgtttgtataagatattttttggaaaagaaaatctagtttnnnnnnnccattttggttattttgaagtgtttgattaggataaaaaatattata |
204 |
Q |
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| T |
50032132 |
tgggtgcgtttgtataagatattttttggaaaagaaaatctagtttaaaaaaaccatttttgttattttaaagtgtttgattaggataaaaaatattata |
50032033 |
T |
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| Q |
205 |
tatcaaataaatagttatctaaatctaatgattattgttgaggatgagagagactgattgggttgttgatga |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
50032032 |
tatcaaataaatagttatctaaatctaatgattattgttgaggatgagagagattgattgggttgttgatga |
50031961 |
T |
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