View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14381_high_9 (Length: 381)
Name: NF14381_high_9
Description: NF14381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14381_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 34 - 367
Target Start/End: Complemental strand, 10049683 - 10049346
Alignment:
| Q |
34 |
atgtgaaaaattaccaatgtgcttctcctgctgacggaacttgtaggagtgactcccatctgaattttcaatttcaaaatcaatgttaatcagacagtag |
133 |
Q |
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| T |
10049683 |
atgtgaaaaattaccaatgtgcttctcctgctgacggaacttgtaggagtgactcccatctgaaatttcaatttcaaaatcaatgttaatcagacagtag |
10049584 |
T |
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| Q |
134 |
cagtaccactcatggaca----ttgatgaaggtgtaggtgctatttcttaccaaaagctgaagtgtagaggttgctccacttgaatgccacagttggagg |
229 |
Q |
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| T |
10049583 |
cagtaccacacatggacagacattgatgaaggtgtaggtgctatttcttaccaaaagctgaagtgtagaggttgctccacttgaatgccacaggtggagg |
10049484 |
T |
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| Q |
230 |
agatggaacttgaagatcacgcaagcaaacgaacttccaaatagcatcatccatgatcacgcggtggaaccatctgttcgtcgcagccagcattaccagc |
329 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |
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| T |
10049483 |
agatggaacttgaagatcacgcaagcaaacgaacttccaaatgacatcatccatgatcacgcggcggaaccatcggttcgtcgcagccagcattaccagc |
10049384 |
T |
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| Q |
330 |
gattttccatccagaaacttcgctatctcagtccaaat |
367 |
Q |
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| T |
10049383 |
gattttccatccagaaacttcgctatctcagtccaaat |
10049346 |
T |
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