View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14381_low_16 (Length: 281)
Name: NF14381_low_16
Description: NF14381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14381_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 34 - 264
Target Start/End: Complemental strand, 10049683 - 10049449
Alignment:
| Q |
34 |
atgtgaaaaattaccaatgtgcttctcctgctgacggaacttgtaggagtgactcccatctgaattttcaatttcaaaatcaatgttaatcagacagtag |
133 |
Q |
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| T |
10049683 |
atgtgaaaaattaccaatgtgcttctcctgctgacggaacttgtaggagtgactcccatctgaaatttcaatttcaaaatcaatgttaatcagacagtag |
10049584 |
T |
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| Q |
134 |
cagtaccactcatggaca----ttgatgaaggtgtaggtgctatttcttaccaaaagctgaagtgtagaggttgctccacttgaatgccacagttggagg |
229 |
Q |
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||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
10049583 |
cagtaccacacatggacagacattgatgaaggtgtaggtgctatttcttaccaaaagctgaagtgtagaggttgctccacttgaatgccacaggtggagg |
10049484 |
T |
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| Q |
230 |
agatggaacttgaagatcacgcaagcaaacgaact |
264 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
10049483 |
agatggaacttgaagatcacgcaagcaaacgaact |
10049449 |
T |
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