View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14382_low_16 (Length: 246)
Name: NF14382_low_16
Description: NF14382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14382_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 8336719 - 8336529
Alignment:
| Q |
15 |
agcataggagtatagacatcaacaaatctaatatcataatcaggaagggagcctttaacagttgcgagcccctgctgtaacatgttattgtattgtgttg |
114 |
Q |
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| T |
8336719 |
agcataggagtatagacatcaacaaatctaatatcataatcaggaagggagcctttaacagttgcaagcccctgctgtaacatgttattgtattgtgctg |
8336620 |
T |
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| Q |
115 |
ctaacccattctcaaaatctacacaaacccttaatggtcctcccattgtagatctagctgcaggtaagcaccctaatggaagtgtacttag |
205 |
Q |
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| T |
8336619 |
ctaacccattctcaaaatctacacaaacccttaatggtcctcccattgtagatctagctgcaggtaagcaccctaatggaagtgtacttag |
8336529 |
T |
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