View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14382_low_7 (Length: 405)
Name: NF14382_low_7
Description: NF14382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14382_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 32093584 - 32093775
Alignment:
| Q |
11 |
agataatacttcaattaaaatagctaacacatgaactttggcactcaactgttccactctagccagtcttgagtcaacagtgctaaaattaaaatattgg |
110 |
Q |
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| T |
32093584 |
agataatacttcaattaaaatagctaacacatgaactttggcactcaactgttccactctagccagtcttgagtcaacagtgctaaaattaaaatattgg |
32093683 |
T |
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| Q |
111 |
tttgaatttggcctcatgttctcaatatgatgaaaatattgtcctataacaattacatgatttgaactcaatacattggtcagctcaatttt |
202 |
Q |
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| T |
32093684 |
tttgaatttggcctcatgttctcaatatgatgaaaatattgtcctataacaattacatgctttgaactcaatacattggtcagctcaatttt |
32093775 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 207 - 361
Target Start/End: Original strand, 32095274 - 32095428
Alignment:
| Q |
207 |
ccctattggtcactataacggatattgattccctgttgtcaatgtcaagtaaccacacatttgatcggtcagtgagtttgatttcacagaaatctttaat |
306 |
Q |
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| T |
32095274 |
ccctattggtcactataacggatattgattccctgttgtcaatgtcaagtaaccacacattcgttcggtcagtgagtttgatttcacagaaatctttaat |
32095373 |
T |
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| Q |
307 |
tcaacagaaagatgcaattcagatattcatcagacagaataaattaattaacaac |
361 |
Q |
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| T |
32095374 |
tcaacagaaagatgcaattcagatattcatcagacagaataaattaattaacaac |
32095428 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 32095452 - 32095496
Alignment:
| Q |
361 |
caagatttctataaagagaaccaaaggatacaagagtgtgatcct |
405 |
Q |
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| T |
32095452 |
caagatttctataaagagaaccaaaggatacaagagtgtgatcct |
32095496 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 32088244 - 32088285
Alignment:
| Q |
207 |
ccctattggtcactataacggatattgattccctgttgtcaa |
248 |
Q |
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| T |
32088244 |
ccctattgatcactataacggatatcgattccctgttgtcaa |
32088285 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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