View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14385_low_2 (Length: 330)

Name: NF14385_low_2
Description: NF14385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14385_low_2
NF14385_low_2
[»] chr5 (1 HSPs)
chr5 (263-314)||(13629929-13629980)


Alignment Details
Target: chr5 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 13629929 - 13629980
Alignment:
263 aactctaagttctaagataatcttgcttacaatttcggcaaaggcaccttat 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
13629929 aactctaagttctaagataatcttgcttacaatttcggcaaaggcaccttat 13629980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University