View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14386_low_8 (Length: 344)
Name: NF14386_low_8
Description: NF14386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14386_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 153 - 248
Target Start/End: Original strand, 37769764 - 37769863
Alignment:
| Q |
153 |
gcattagaaggttctgctccagattcgctgtcatacac----acacaaacacccattccgccagctatgccttttctgtgagtttctttctctcattcac |
248 |
Q |
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| T |
37769764 |
gcattagaaggttctgttccagattcgctgtcatacacacacacacaaacacccattccgccagctatgccttttctgtgagtttctttctctcattcac |
37769863 |
T |
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Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 37769648 - 37769722
Alignment:
| Q |
37 |
gctaaatttcttcatagattagaaatttgtatgactcaattctggtaaaatgcaataaacaaattctttctatta |
111 |
Q |
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| T |
37769648 |
gctaaatttcttcatagattagaaatttgtatgactcaattctggtaaaatgcaataaacaaattctttatatta |
37769722 |
T |
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