View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14387_low_17 (Length: 257)
Name: NF14387_low_17
Description: NF14387
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14387_low_17 |
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Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 10 - 234
Target Start/End: Original strand, 2502079 - 2502303
Alignment:
| Q |
10 |
agcagcacagaccagagagaataaaattcaaagttgaagaagttcctattgtttcacttttcaccagagacaacagttccaaaaacagcaacaaatctca |
109 |
Q |
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|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2502079 |
agcaacacaaaccagagagaataaaattcaaagttgaagaagttcctattgtttcacttttcaccagagacaacagttccaaaaacagcaacaaatctca |
2502178 |
T |
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| Q |
110 |
aacaaaccagaaccagaaagttgaacatgaatcatcattatcacctttggaagagaaacgtttctcaaaggaaatagttatgcacaagtatttgaaaatg |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2502179 |
aacaaaccagaaccagaaagttgaacatgaatcatcattatcacctttggaagagaaacgtttctcaaaggaaatagttatgcacaagtatttgaaaatg |
2502278 |
T |
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| Q |
210 |
gtgaaacctctttacataagggttt |
234 |
Q |
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||||||||||||||||||||||||| |
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| T |
2502279 |
gtgaaacctctttacataagggttt |
2502303 |
T |
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