View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14389_high_9 (Length: 402)
Name: NF14389_high_9
Description: NF14389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14389_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 18 - 390
Target Start/End: Original strand, 43981589 - 43981961
Alignment:
| Q |
18 |
gaaattaacttaagattttgttactctatttaggtctaagtaactttagcgaagatatttcgattttttctacatgtacagaatcaattgatttgcatga |
117 |
Q |
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| T |
43981589 |
gaaattaacttaagattttgttactctatttaggtctaagtaactttagcgaagatatttcgattttttctacatgtacagaatcaattgatttgcatga |
43981688 |
T |
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| Q |
118 |
tatgcatctttgttaattttgtttaatttaatcgtatgttactattcatggaaagagacggtcaaaaagaaaattgtattatttatagcactttagctta |
217 |
Q |
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| T |
43981689 |
tatgcatctttgttaattttgtttaatttaatcgtatgttactattcatagaaagatacggtcaaaaagaaaattgtattatttatagcactttagctta |
43981788 |
T |
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| Q |
218 |
ggggaagaaactaatttcagttgcgaagaaatattataaaattgaaatagtagatggtctatgggtttttcatttgataagatgaatgaatcgttaataa |
317 |
Q |
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| T |
43981789 |
agggaagaaactaatttcagttgcgaagaaatattataaaattgaaatagtagatggtctatggttttttcatttgataagatgaatgaatcgttaataa |
43981888 |
T |
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| Q |
318 |
aattcagatatggaaaagagtatcaatatagataccatctgtaaagcttagcccaaaagacaattccaatatt |
390 |
Q |
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| T |
43981889 |
aattcagatatggaaaagaatatcaatatagataccatctgtaaagcttagctcaaaagacaatgccgatatt |
43981961 |
T |
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