View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14389_low_14 (Length: 373)
Name: NF14389_low_14
Description: NF14389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14389_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 344; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 1 - 364
Target Start/End: Original strand, 10858592 - 10858955
Alignment:
| Q |
1 |
tttacttcctttcttaacaaaaatggaaaagttggcagttcgaaattgtggttttgtgaaaaccatatttgatgtgagacgtataacagaagacagaaaa |
100 |
Q |
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| T |
10858592 |
tttacttcctttcttaacaaaaatggaaaaattggcagttcgaaattgtagttctgtgaaaaccatatttgatgtgagacgtataacagaagacagaaaa |
10858691 |
T |
|
| Q |
101 |
atgaaaaccaagggaccagccctgatgcccttccctttttccctgaaggtattgactttagagcagttgccaaatttgaagaatgtttggaatgaagatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
10858692 |
atgaaaaccaagggaccagccctgatgcccttccctttttccctgaaggtattgactttagagcagttgccaaatttggagaatgtttggaatgaagatc |
10858791 |
T |
|
| Q |
201 |
ctcatggaattctaacaattgaacttctaaaacaagtatatgttgatgactgtaaaggccttacaagtttgttcccagcctcagtagccaaagatcttgt |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
10858792 |
ctcatggaattctaacaattgaacttctaaaacaagtatatgttgatgactgtaaaggccttataagtttgttcccagcctcagtagccaaagatcttgt |
10858891 |
T |
|
| Q |
301 |
gaaacttgaagatctacacgtgaaacactgtgaagagctgatggttattgttgcagagaataat |
364 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10858892 |
gaaacttgaagatctacacgtgaaacactgtgaagagctgatggttattgttgcagagaataat |
10858955 |
T |
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