View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1438_high_9 (Length: 286)

Name: NF1438_high_9
Description: NF1438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1438_high_9
NF1438_high_9
[»] scaffold0596 (1 HSPs)
scaffold0596 (18-268)||(1134-1387)
[»] chr5 (4 HSPs)
chr5 (18-268)||(7472871-7473130)
chr5 (18-267)||(30441932-30442186)
chr5 (18-265)||(9044285-9044538)
chr5 (101-183)||(40163917-40163996)
[»] chr3 (5 HSPs)
chr3 (18-268)||(19881497-19881752)
chr3 (18-265)||(53972673-53972924)
chr3 (62-198)||(37982961-37983097)
chr3 (222-265)||(37982835-37982878)
chr3 (236-268)||(31685543-31685575)
[»] chr2 (4 HSPs)
chr2 (63-268)||(23348413-23348621)
chr2 (18-265)||(12742171-12742423)
chr2 (18-264)||(18354694-18354950)
chr2 (18-227)||(10328413-10328627)
[»] chr7 (3 HSPs)
chr7 (18-268)||(43070769-43071023)
chr7 (236-268)||(48849391-48849423)
chr7 (236-268)||(1262569-1262601)
[»] chr6 (1 HSPs)
chr6 (235-265)||(10092955-10092985)
[»] scaffold0035 (1 HSPs)
scaffold0035 (235-268)||(35541-35574)
[»] chr8 (1 HSPs)
chr8 (235-268)||(14677630-14677663)
[»] chr4 (1 HSPs)
chr4 (235-267)||(29862969-29863001)


Alignment Details
Target: scaffold0596 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0596
Description:

Target: scaffold0596; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 18 - 268
Target Start/End: Complemental strand, 1387 - 1134
Alignment:
Q  18 aaaggtcagcatcaatgggcatattggtgtgtttgnnnnnnnnntacacatgattttaaagcatcaatcaatttattaacaacataatacatgatggtaa 117  Q
    |||||||||||||||||| ||||||||||||||||         ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||    
T  1387 aaaggtcagcatcaatggacatattggtgtgtttgaaaaaaaaatacacatgattttaaaatatcaatcaatttattaacagcataatacatgatggtaa 1288  T
Q  118 aatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttaggatatat 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||     
T  1287 aatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacaggaacaacgatttaggatata- 1189  T
Q  213 gtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcg 268  Q
     ||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  1188 -tatagtagcatcttcaacacacctggctgatacgatgccgcagacgacaacggcg 1134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 167; Significance: 2e-89; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 18 - 268
Target Start/End: Original strand, 7472871 - 7473130
Alignment:
Q  18 aaaggtcagcatcaatgggcatattggtgtgtttgnnnnnnnnntacacat--gattttaaagcatcaatcaatttattaacaacataatacatgatggt 115  Q
    |||||||||||||||||| ||||||||||||||||         |||||||  |||||||||| ||||||||||||||||||| ||||||||||||||||    
T  7472871 aaaggtcagcatcaatggacatattggtgtgtttgaaaaaaaaatacacatatgattttaaagtatcaatcaatttattaacagcataatacatgatggt 7472970  T
Q  116 aaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttagg--at 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||  ||    
T  7472971 aaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacaggaacaacgatttaggatat 7473070  T
Q  209 atatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcg 268  Q
    |||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  7473071 atatatatagtagcatcttcaacacacctggctgatacgatgccgcagacgacaacggcg 7473130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 30441932 - 30442186
Alignment:
Q  18 aaaggtcagcatcaatgggcatattggtgtgtttgnnnnnnnnntacacat--gattttaaagcatcaatcaatttattaacaacataatacatgatggt 115  Q
    |||||||||||||||||| ||||||||||||||||         || ||||  |||||||||| ||||||||||||||||||||||||||||||||||||    
T  30441932 aaaggtcagcatcaatggacatattggtgtgtttgaaaaaaaaataaacatatgattttaaagtatcaatcaatttattaacaacataatacatgatggt 30442031  T
Q  116 aaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttaggatat 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||    
T  30442032 aaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacaggaacaacgatttaggatat 30442131  T
Q  211 atgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggc 267  Q
    |  ||||| | |||||||||||||  |||||||||||||||||||||||||||||||    
T  30442132 a--tatagtagcatcttcaacacatatggctgatacgatgccgcagacgacaacggc 30442186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 18 - 265
Target Start/End: Complemental strand, 9044538 - 9044285
Alignment:
Q  18 aaaggtcagcatcaatgggcatattggtgtgtttgnnnnnnnnn-tacacat--gattttaaagcatcaatcaatttattaacaacataatacatgatgg 114  Q
    |||||||||||||||||| ||||||||||||||||          |||||||  |||||||||| ||||||||||||||||||| |||||||||||||||    
T  9044538 aaaggtcagcatcaatggacatattggtgtgtttgaaaaaaaaaatacacatatgattttaaagtatcaatcaatttattaacagcataatacatgatgg 9044439  T
Q  115 taaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttaggata 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||    
T  9044438 taaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacaggaacaacgatttaggata 9044339  T
Q  210 tatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacg 265  Q
    ||  ||||| | |||||||||||||| ||||||||||||||| |||||||||||||    
T  9044338 ta--tatagtagcatcttcaacacacttggctgatacgatgctgcagacgacaacg 9044285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 101 - 183
Target Start/End: Complemental strand, 40163996 - 40163917
Alignment:
Q  101 ataatacatgatggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttag 183  Q
    ||||||||| || ||||||||||| |||||||||   |||||| | ||||||||| ||| || ||||||||||||||||||||    
T  40163996 ataatacataattgtaaaatctatgtaaatatca---attcacatccaaacaaactaaatatataatggaataacaaagttag 40163917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 165; Significance: 3e-88; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 18 - 268
Target Start/End: Original strand, 19881497 - 19881752
Alignment:
Q  18 aaaggtcagcatcaatgggcatattggtgtgtttgnnnnnnnnnta--cacatgattttaaagcatcaatcaatttattaacaacataatacatgatggt 115  Q
    |||||||||||||||||| ||||||||||||||||          |  ||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  19881497 aaaggtcagcatcaatggacatattggtgtgtttgaaaaaaaaaaaaacacatgattttaaagtatcaatcaatttattaacagcataatacatgatggt 19881596  T
Q  116 aaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttaggatat 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||    
T  19881597 aaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacaggaacaacgatttaggatat 19881696  T
Q  211 atgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcg 268  Q
    |  ||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  19881697 a--tatagtagcatcttcaacacacctggctgatacgatgccgcagacgacaacggcg 19881752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 18 - 265
Target Start/End: Original strand, 53972673 - 53972924
Alignment:
Q  18 aaaggtcagcatcaatgggcatattggtgtgtttgnnnnnnnnn-tacacatgattttaaagcatcaatcaatttattaacaacataatacatgatggta 116  Q
    |||||||||||||||||| ||||||||||||||||          ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  53972673 aaaggtcagcatcaatggacatattggtgtgtttgaaaaaaaaaatacacatgattttaaagtatcaatcaatttattaacagcataatacatgatggta 53972772  T
Q  117 aaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttaggatata 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||    
T  53972773 aaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacaggaacaacgatttaggatata 53972872  T
Q  212 tgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacg 265  Q
      ||||| | |||||||||||||| |||||||||||||||||||||||||||||    
T  53972873 --tatagtagcatcttcaacacacttggctgatacgatgccgcagacgacaacg 53972924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 62 - 198
Target Start/End: Complemental strand, 37983097 - 37982961
Alignment:
Q  62 tacacatgattttaaagcatcaatcaatttattaacaacataatacatgatggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaa 161  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37983097 tacacatgattttaaagtatcaatcaatttattaacagcataatacatgatggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaa 37982998  T
Q  162 tgtaatggaataacaaagttagggaaaagttacagga 198  Q
    |||||||||||||||||||||||||||||||||||||    
T  37982997 tgtaatggaataacaaagttagggaaaagttacagga 37982961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 37982878 - 37982835
Alignment:
Q  222 catcttcaacacacctggctgatacgatgccgcagacgacaacg 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  37982878 catcttcaacacacctggctgatacgatgccgcagacgacaacg 37982835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 31685575 - 31685543
Alignment:
Q  236 ctggctgatacgatgccgcagacgacaacggcg 268  Q
    |||||||||||||||||||||||||||||||||    
T  31685575 ctggctgatacgatgccgcagacgacaacggcg 31685543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 164; Significance: 1e-87; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 63 - 268
Target Start/End: Original strand, 23348413 - 23348621
Alignment:
Q  63 acacatgattttaaagcatcaatcaatttattaacaacataatacatgatggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaat 162  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23348413 acacatgattttaaagtatcaatcaatttattaacagcataatacatgatggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaat 23348512  T
Q  163 gtaatggaataacaaagttagggaaaagttacagga-----gatttaggatatatgtatagcatcatcttcaacacacctggctgatacgatgccgcaga 257  Q
    ||||||||||||||||||||||||||||||||||||     |||||||||||||  ||||| | ||||||||||||||||||||||||||||||||||||    
T  23348513 gtaatggaataacaaagttagggaaaagttacaggaacaacgatttaggatata--tatagtagcatcttcaacacacctggctgatacgatgccgcaga 23348610  T
Q  258 cgacaacggcg 268  Q
    |||||||||||    
T  23348611 cgacaacggcg 23348621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 18 - 265
Target Start/End: Complemental strand, 12742423 - 12742171
Alignment:
Q  18 aaaggtcagcatcaatgggcatattggtgtgtttgnnnnnnnnntacacat--gattttaaagcatcaatcaatttattaacaacataatacatgatggt 115  Q
    |||||||||||||||||| ||||||||||||||||         |||||||  |||||||||| ||||||||||||||||||| ||||||||||||||||    
T  12742423 aaaggtcagcatcaatggacatattggtgtgtttgaaaaaaaaatacacatatgattttaaagtatcaatcaatttattaacagcataatacatgatggt 12742324  T
Q  116 aaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttaggatat 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||    
T  12742323 aaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacaggaacaacgatttaggatat 12742224  T
Q  211 atgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacg 265  Q
    |  ||||| | |||||||||||||||| |||||||||||||||||||||||||||    
T  12742223 a--tatagtagcatcttcaacacaccttgctgatacgatgccgcagacgacaacg 12742171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 18 - 264
Target Start/End: Original strand, 18354694 - 18354950
Alignment:
Q  18 aaaggtcagcatcaatgggcatattggtgtgtttgnnnnnnnnntacacat--gattttaaagcatcaatcaatttattaacaacataatacatgatggt 115  Q
    |||||||||||||||||| ||||||||||||||||         |||||||  |||||||||| ||||||||||||||||| | ||||||||||||||||    
T  18354694 aaaggtcagcatcaatggacatattggtgtgtttgaaaaaaaa-tacacatatgattttaaagtatcaatcaatttattaagagcataatacatgatggt 18354792  T
Q  116 aaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttagg---- 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     ||||||||        
T  18354793 aaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagctacaggaacaacgatttaggatat 18354892  T
Q  207 atatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaac 264  Q
    |||||| ||||| | ||||||||||||||||| ||||||||| ||||||||| |||||    
T  18354893 atatatatatagtagcatcttcaacacacctgactgatacgacgccgcagacaacaac 18354950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 10328413 - 10328627
Alignment:
Q  18 aaaggtcagcatcaatgggcatattggtgtgtttgnnnnnnnnntacacatgattttaaagcatcaatcaatttattaacaacataatacatgatggtaa 117  Q
    |||||||| ||||||||| ||||||||||||||||         ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  10328413 aaaggtcaacatcaatggacatattggtgtgtttgaaaaaaaaatacacatgattttaaagtatcaatcaatttattaacagcataatacatgatggtaa 10328512  T
Q  118 aatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttaggatatat 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||     ||||||||||||||    
T  10328513 aatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagatacatgaacaacgatttaggatatat 10328612  T
Q  213 gtatagcatcatctt 227  Q
     ||||| | ||||||    
T  10328613 atatagtagcatctt 10328627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 160; Significance: 3e-85; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 18 - 268
Target Start/End: Original strand, 43070769 - 43071023
Alignment:
Q  18 aaaggtcagcatcaatgggcatattggtgtgtttgnnnnnnnnntacacat--gattttaaagcatcaatcaatttattaacaacataatacatgatggt 115  Q
    |||||||||||||||||| ||||||||||||||||         |||||||  |||||||||| ||||||||||||||||| | ||||||||||||||||    
T  43070769 aaaggtcagcatcaatggacatattggtgtgtttgaaaaaaaa-tacacatatgattttaaagtatcaatcaatttattaagagcataatacatgatggt 43070867  T
Q  116 aaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttaggatat 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||    
T  43070868 aaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacaggaacaacgatttaggatat 43070967  T
Q  211 atgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcg 268  Q
    |  ||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  43070968 a--tatagtagcatcttcaacacacctggctgatacgatgccgcagacgacaacggcg 43071023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 48849391 - 48849423
Alignment:
Q  236 ctggctgatacgatgccgcagacgacaacggcg 268  Q
    |||||||||||||||||||||||||||||||||    
T  48849391 ctggctgatacgatgccgcagacgacaacggcg 48849423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 1262601 - 1262569
Alignment:
Q  236 ctggctgatacgatgccgcagacgacaacggcg 268  Q
    |||||||||||||||||||| ||||||||||||    
T  1262601 ctggctgatacgatgccgcatacgacaacggcg 1262569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 265
Target Start/End: Complemental strand, 10092985 - 10092955
Alignment:
Q  235 cctggctgatacgatgccgcagacgacaacg 265  Q
    |||||||||||||||||||||||||||||||    
T  10092985 cctggctgatacgatgccgcagacgacaacg 10092955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 268
Target Start/End: Complemental strand, 35574 - 35541
Alignment:
Q  235 cctggctgatacgatgccgcagacgacaacggcg 268  Q
    ||||||||||||||||||||| ||||||||||||    
T  35574 cctggctgatacgatgccgcaaacgacaacggcg 35541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 268
Target Start/End: Original strand, 14677630 - 14677663
Alignment:
Q  235 cctggctgatacgatgccgcagacgacaacggcg 268  Q
    ||||||||||||||||| ||||||||||||||||    
T  14677630 cctggctgatacgatgctgcagacgacaacggcg 14677663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 29862969 - 29863001
Alignment:
Q  235 cctggctgatacgatgccgcagacgacaacggc 267  Q
    ||||||||||||||||||||||| |||||||||    
T  29862969 cctggctgatacgatgccgcagatgacaacggc 29863001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University