View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1438_low_3 (Length: 455)
Name: NF1438_low_3
Description: NF1438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1438_low_3 |
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Alignment Details
Target: chr4 (Bit Score: 400; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 6 - 437
Target Start/End: Complemental strand, 51058968 - 51058537
Alignment:
| Q |
6 |
aggagcagagataggttggagatttatgggccgaggaacagttactgcagtgtgtctgccatgataactggtgttccctgcattgtatgaaagttgaatc |
105 |
Q |
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| T |
51058968 |
aggaacagaaataggttggagatttatgtgccgaggaacagttactgcagtgtgtctgccatgataactggtgttccctgcattgtatgaaagttgaatc |
51058869 |
T |
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| Q |
106 |
aaaacgaaatacaattatagtgctaataaaactacaaagactggcaatttttggaacatctcaatttgaacaattgaagcagatcactagagaatgacat |
205 |
Q |
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| T |
51058868 |
aaaacgaaatacaattatagtgctaatacaactacaaagactggcaatttttggaacatctcaatttgaacaattgaatcagatcactagagaatgacat |
51058769 |
T |
|
| Q |
206 |
agaaaaaatgataagaaacatgtaatatgtatatacaaaaacaaagttgaaaattgtctagtagataaacttgcaagattacagatgaaaactatgcaaa |
305 |
Q |
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| T |
51058768 |
agaaaaaatgataagaaacatgtaatatgtatatacaaaaacaaagttgaaaattgtctagtagataaacttgcaagattacagatgaaaactatgcaaa |
51058669 |
T |
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| Q |
306 |
cttaatatgtgattcagattataactatgacttgtataaatcttaaatagaaaattgtaaagaaaggtaaaggagatttaccgccgttaggattggtttg |
405 |
Q |
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| T |
51058668 |
cttaatctgtgattaagattatgactatgacttgtataaatcttaaatagaaaattgtaaagaaaggtaaaggagatttaccgccgttaggattggtttg |
51058569 |
T |
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| Q |
406 |
catgaagattcctttgtcagcagtagtataag |
437 |
Q |
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| T |
51058568 |
catgaagattcctttgtcagcagtagtataag |
51058537 |
T |
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