View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14390_low_21 (Length: 217)
Name: NF14390_low_21
Description: NF14390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14390_low_21 |
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Alignment Details
Target: chr3 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 17 - 201
Target Start/End: Original strand, 5304381 - 5304569
Alignment:
| Q |
17 |
tatataccttgttgttaatttatcaaatattattaaaaatgagggagaaacatctcatatagactttcatctagagg----gttcatttccaataaatta |
112 |
Q |
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| T |
5304381 |
tatataccttgttgttaatttatcaaatattattaaaaatgagggagaaacatctcatatagactttcatctagaggttcaattcatttccaataaatta |
5304480 |
T |
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| Q |
113 |
ttttaaggttaagagtttattgttattgtgtagctagtgtgagttagaagttccacaatgaatggaaaagtgagttttgagtaatatat |
201 |
Q |
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| T |
5304481 |
ttttaaggttaagagtttattgttattgtgtagctagtgtgagttagaagttccacaatgaatggaaaagtgagttttgagtaatatat |
5304569 |
T |
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