View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14390_low_22 (Length: 205)
Name: NF14390_low_22
Description: NF14390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14390_low_22 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 3464888 - 3464684
Alignment:
| Q |
1 |
catcatgttctatttaattcatttaagtcatggatattacgagacgacaaacactcaaactctataagacgacgaacaacacacacctgacacaaaatga |
100 |
Q |
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| T |
3464888 |
catcatgttctatttaattcatttaagtcatggatattacgagacgacagacactcaaactctacaagacgacgaacaacacacacctgacacaaaatga |
3464789 |
T |
|
| Q |
101 |
acgcgtcgtcccttagcaatttatcgcccaaatcgactaacatttttcaataaggtttccgaaaagaaaaggtgtacaactgtgaattgagaccatatga |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3464788 |
acgcgttgtcccttagcaatttatcgcccaaatcgattaacatttttcaataaggtttccgaaaagaaaaggtgtacaactgtgaattgagaccatatgt |
3464689 |
T |
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| Q |
201 |
gtgat |
205 |
Q |
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||||| |
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| T |
3464688 |
gtgat |
3464684 |
T |
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