View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14392_high_19 (Length: 479)

Name: NF14392_high_19
Description: NF14392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14392_high_19
NF14392_high_19
[»] chr3 (51 HSPs)
chr3 (220-466)||(23391547-23391793)
chr3 (13-222)||(23391249-23391457)
chr3 (13-220)||(23430763-23430966)
chr3 (224-384)||(23431067-23431227)
chr3 (384-466)||(29813349-29813431)
chr3 (384-465)||(29196188-29196269)
chr3 (382-466)||(22834804-22834887)
chr3 (382-466)||(23410128-23410212)
chr3 (382-466)||(40734785-40734868)
chr3 (383-466)||(39153162-39153245)
chr3 (385-465)||(9666270-9666349)
chr3 (384-466)||(761132-761212)
chr3 (382-465)||(29811157-29811240)
chr3 (384-466)||(44700283-44700364)
chr3 (382-466)||(7762554-7762638)
chr3 (382-466)||(9635920-9636004)
chr3 (382-466)||(32891378-32891461)
chr3 (385-464)||(2074883-2074960)
chr3 (384-466)||(5236256-5236337)
chr3 (385-466)||(7764753-7764834)
chr3 (404-466)||(19683706-19683768)
chr3 (385-466)||(27305519-27305597)
chr3 (384-466)||(40735670-40735751)
chr3 (382-431)||(4160056-4160105)
chr3 (66-126)||(18867192-18867252)
chr3 (383-466)||(31314728-31314810)
chr3 (383-466)||(51399102-51399184)
chr3 (385-466)||(9581571-9581652)
chr3 (385-466)||(29682644-29682726)
chr3 (382-462)||(37406981-37407060)
chr3 (41-126)||(4675341-4675423)
chr3 (408-466)||(5257966-5258024)
chr3 (408-466)||(9634644-9634701)
chr3 (408-466)||(45095451-45095509)
chr3 (385-466)||(21350811-21350891)
chr3 (385-466)||(37408747-37408827)
chr3 (382-466)||(23199935-23200017)
chr3 (412-466)||(5260149-5260203)
chr3 (408-466)||(16499302-16499360)
chr3 (384-466)||(51351940-51352020)
chr3 (385-437)||(6095390-6095443)
chr3 (383-459)||(23197743-23197817)
chr3 (382-437)||(43403527-43403583)
chr3 (80-126)||(4501526-4501572)
chr3 (382-420)||(44330950-44330988)
chr3 (81-126)||(27900938-27900983)
chr3 (388-437)||(34491508-34491557)
chr3 (408-456)||(801388-801436)
chr3 (80-116)||(6817329-6817365)
chr3 (385-437)||(40913594-40913646)
chr3 (385-437)||(47304578-47304629)
[»] chr7 (49 HSPs)
chr7 (45-221)||(2784994-2785167)
chr7 (385-466)||(47675936-47676017)
chr7 (384-466)||(23555329-23555411)
chr7 (383-466)||(18126934-18127017)
chr7 (385-466)||(26417604-26417685)
chr7 (88-221)||(2758882-2759012)
chr7 (383-466)||(14069631-14069714)
chr7 (383-466)||(14379659-14379742)
chr7 (384-466)||(47673743-47673825)
chr7 (384-466)||(41648813-41648894)
chr7 (385-466)||(19502466-19502547)
chr7 (385-466)||(31105200-31105280)
chr7 (385-466)||(31732768-31732849)
chr7 (385-466)||(41317238-41317319)
chr7 (389-466)||(43864532-43864609)
chr7 (386-466)||(48489719-48489798)
chr7 (382-437)||(6430444-6430499)
chr7 (408-466)||(29991341-29991399)
chr7 (377-466)||(4586449-4586538)
chr7 (384-465)||(36146211-36146291)
chr7 (384-466)||(27348105-27348186)
chr7 (385-466)||(1113940-1114021)
chr7 (385-466)||(25616143-25616223)
chr7 (385-466)||(38671025-38671105)
chr7 (381-437)||(4510335-4510391)
chr7 (381-437)||(4512177-4512233)
chr7 (408-466)||(4179061-4179119)
chr7 (80-134)||(31849146-31849200)
chr7 (408-466)||(35854204-35854262)
chr7 (385-466)||(8153625-8153705)
chr7 (385-466)||(48491864-48491944)
chr7 (41-126)||(41542875-41542957)
chr7 (387-437)||(2360774-2360824)
chr7 (408-466)||(25766779-25766837)
chr7 (80-126)||(41454680-41454726)
chr7 (385-466)||(23344253-23344332)
chr7 (81-126)||(43364658-43364703)
chr7 (41-126)||(28442861-28442943)
chr7 (408-466)||(495810-495868)
chr7 (408-466)||(48409095-48409153)
chr7 (81-126)||(9702149-9702194)
chr7 (408-465)||(24525328-24525385)
chr7 (384-437)||(30814718-30814771)
chr7 (80-125)||(37522210-37522255)
chr7 (385-437)||(22270269-22270321)
chr7 (384-437)||(32357847-32357902)
chr7 (383-466)||(12096964-12097045)
chr7 (73-116)||(26840786-26840829)
chr7 (80-126)||(48455794-48455840)
[»] chr2 (40 HSPs)
chr2 (40-154)||(22600296-22600410)
chr2 (382-463)||(11690778-11690859)
chr2 (382-466)||(723544-723627)
chr2 (384-466)||(34139572-34139653)
chr2 (380-466)||(17057164-17057249)
chr2 (380-466)||(17085147-17085232)
chr2 (384-466)||(36987874-36987955)
chr2 (381-466)||(5723052-5723136)
chr2 (385-466)||(6594804-6594884)
chr2 (385-466)||(11151395-11151476)
chr2 (385-466)||(42362633-42362713)
chr2 (385-465)||(33162254-33162333)
chr2 (387-464)||(13122049-13122124)
chr2 (385-466)||(24885873-24885953)
chr2 (385-466)||(39285122-39285202)
chr2 (385-465)||(36773847-36773926)
chr2 (383-466)||(2838233-2838315)
chr2 (41-126)||(33034165-33034247)
chr2 (380-466)||(2334213-2334298)
chr2 (384-466)||(14633627-14633708)
chr2 (385-458)||(29868164-29868237)
chr2 (383-466)||(36317811-36317894)
chr2 (384-466)||(38312528-38312608)
chr2 (140-221)||(13497952-13498029)
chr2 (41-126)||(44611658-44611740)
chr2 (408-466)||(4502955-4503013)
chr2 (384-466)||(11049833-11049913)
chr2 (384-466)||(14202223-14202304)
chr2 (408-466)||(36205487-36205545)
chr2 (408-466)||(45100042-45100100)
chr2 (66-123)||(22197847-22197904)
chr2 (419-466)||(11067588-11067635)
chr2 (408-466)||(4484150-4484208)
chr2 (80-119)||(34745058-34745097)
chr2 (385-466)||(32289856-32289937)
chr2 (80-126)||(43670182-43670228)
chr2 (86-123)||(16428513-16428550)
chr2 (80-137)||(28392621-28392677)
chr2 (388-466)||(4561358-4561435)
chr2 (408-456)||(30833646-30833694)
[»] chr5 (34 HSPs)
chr5 (383-465)||(3075547-3075629)
chr5 (384-466)||(30682721-30682803)
chr5 (382-466)||(534046-534130)
chr5 (385-466)||(13488488-13488569)
chr5 (385-466)||(39468348-39468429)
chr5 (382-466)||(42428227-42428311)
chr5 (387-466)||(538308-538387)
chr5 (384-466)||(5887234-5887315)
chr5 (384-466)||(42426034-42426116)
chr5 (385-458)||(28750455-28750528)
chr5 (384-465)||(31183262-31183342)
chr5 (385-437)||(40147558-40147610)
chr5 (387-454)||(32637123-32637190)
chr5 (385-466)||(33831966-33832046)
chr5 (409-466)||(36073866-36073923)
chr5 (380-466)||(30182876-30182962)
chr5 (385-458)||(19806658-19806729)
chr5 (385-466)||(16649635-16649715)
chr5 (386-458)||(13240047-13240118)
chr5 (80-220)||(17346551-17346689)
chr5 (41-126)||(40821058-40821140)
chr5 (79-133)||(4693981-4694035)
chr5 (80-126)||(9334915-9334961)
chr5 (385-466)||(8565748-8565828)
chr5 (385-437)||(38747301-38747353)
chr5 (382-456)||(9789018-9789092)
chr5 (408-466)||(13343348-13343406)
chr5 (408-466)||(16409767-16409825)
chr5 (408-466)||(25413048-25413106)
chr5 (85-154)||(14515118-14515186)
chr5 (385-437)||(40751298-40751351)
chr5 (385-437)||(12102586-12102637)
chr5 (385-456)||(18441441-18441512)
chr5 (383-466)||(26178174-26178257)
[»] chr8 (38 HSPs)
chr8 (385-466)||(15213074-15213155)
chr8 (379-466)||(6599253-6599339)
chr8 (379-466)||(6674706-6674792)
chr8 (382-466)||(41366415-41366498)
chr8 (384-466)||(12702430-12702511)
chr8 (385-466)||(30143628-30143708)
chr8 (385-465)||(5689556-5689635)
chr8 (389-464)||(3303474-3303549)
chr8 (385-466)||(4743027-4743108)
chr8 (377-466)||(43036710-43036799)
chr8 (382-466)||(4731946-4732029)
chr8 (383-466)||(19491501-19491583)
chr8 (385-466)||(33352438-33352518)
chr8 (409-466)||(34254154-34254211)
chr8 (409-466)||(34256330-34256387)
chr8 (382-466)||(18105873-18105956)
chr8 (383-466)||(19945156-19945239)
chr8 (384-466)||(1746017-1746099)
chr8 (408-466)||(17982941-17982999)
chr8 (80-126)||(38657653-38657699)
chr8 (408-466)||(42498483-42498541)
chr8 (408-466)||(44304143-44304201)
chr8 (385-466)||(1345176-1345256)
chr8 (385-466)||(10015362-10015443)
chr8 (408-466)||(27811566-27811626)
chr8 (385-464)||(4733996-4734075)
chr8 (384-465)||(3050924-3051003)
chr8 (408-466)||(31218545-31218603)
chr8 (385-466)||(8154068-8154147)
chr8 (81-122)||(9906674-9906715)
chr8 (385-466)||(40321363-40321442)
chr8 (80-126)||(5063770-5063816)
chr8 (409-466)||(2628027-2628084)
chr8 (383-466)||(3231644-3231726)
chr8 (385-466)||(8965492-8965570)
chr8 (81-125)||(2268119-2268162)
chr8 (391-466)||(3073686-3073758)
chr8 (384-442)||(7493299-7493353)
[»] chr1 (41 HSPs)
chr1 (19-154)||(43102477-43102609)
chr1 (381-466)||(37559660-37559745)
chr1 (382-466)||(28223218-28223302)
chr1 (381-464)||(31659528-31659610)
chr1 (384-466)||(8550583-8550664)
chr1 (384-466)||(28220025-28220107)
chr1 (385-466)||(833970-834050)
chr1 (384-466)||(44455448-44455529)
chr1 (385-466)||(13137780-13137861)
chr1 (386-466)||(30476247-30476327)
chr1 (385-465)||(45644158-45644237)
chr1 (383-466)||(3846919-3847001)
chr1 (384-466)||(40122000-40122081)
chr1 (384-466)||(49918638-49918719)
chr1 (378-466)||(20762956-20763044)
chr1 (382-466)||(10925510-10925593)
chr1 (383-466)||(41361198-41361280)
chr1 (384-466)||(50166979-50167060)
chr1 (389-466)||(3189632-3189708)
chr1 (389-466)||(3198449-3198525)
chr1 (389-466)||(3207288-3207364)
chr1 (385-466)||(28265359-28265439)
chr1 (385-449)||(37503362-37503425)
chr1 (383-466)||(4552446-4552529)
chr1 (387-466)||(13659153-13659231)
chr1 (383-466)||(23555069-23555151)
chr1 (67-126)||(27048531-27048590)
chr1 (385-466)||(196710-196790)
chr1 (385-466)||(1833796-1833876)
chr1 (414-466)||(3157153-3157205)
chr1 (79-126)||(47294429-47294476)
chr1 (408-466)||(50169037-50169095)
chr1 (81-126)||(21815228-21815273)
chr1 (385-466)||(927785-927863)
chr1 (80-126)||(9316370-9316416)
chr1 (382-432)||(19752985-19753035)
chr1 (378-456)||(51765697-51765773)
chr1 (387-466)||(15820584-15820659)
chr1 (273-342)||(30659938-30660006)
chr1 (382-466)||(16455904-16455987)
chr1 (408-440)||(42297791-42297823)
[»] chr4 (36 HSPs)
chr4 (385-466)||(26175436-26175517)
chr4 (382-466)||(12743725-12743809)
chr4 (80-221)||(28589044-28589184)
chr4 (383-466)||(12739351-12739434)
chr4 (385-466)||(36463196-36463276)
chr4 (385-466)||(48893443-48893523)
chr4 (382-466)||(46147192-46147276)
chr4 (387-466)||(52467159-52467238)
chr4 (387-466)||(56178438-56178516)
chr4 (384-466)||(9927257-9927339)
chr4 (385-466)||(37740913-37740994)
chr4 (385-466)||(48143336-48143417)
chr4 (384-466)||(52082462-52082543)
chr4 (385-466)||(6541987-6542067)
chr4 (384-465)||(45686986-45687066)
chr4 (382-466)||(52095159-52095242)
chr4 (384-466)||(29999627-29999709)
chr4 (382-464)||(34570211-34570292)
chr4 (388-466)||(47038219-47038296)
chr4 (382-466)||(5872105-5872186)
chr4 (385-466)||(54199708-54199788)
chr4 (384-466)||(5369880-5369962)
chr4 (385-432)||(36994851-36994898)
chr4 (380-466)||(29254781-29254866)
chr4 (81-122)||(23543310-23543351)
chr4 (384-437)||(50262486-50262539)
chr4 (382-465)||(4588240-4588323)
chr4 (385-466)||(31474434-31474512)
chr4 (408-466)||(13992113-13992171)
chr4 (81-126)||(13568388-13568433)
chr4 (247-383)||(28588782-28588919)
chr4 (385-437)||(41639749-41639801)
chr4 (382-460)||(5350195-5350271)
chr4 (379-466)||(37229523-37229608)
chr4 (387-466)||(48142188-48142266)
chr4 (408-437)||(2210043-2210072)
[»] scaffold1668 (1 HSPs)
scaffold1668 (385-467)||(1301-1383)
[»] chr6 (35 HSPs)
chr6 (379-437)||(602897-602955)
chr6 (385-466)||(26954091-26954171)
chr6 (385-466)||(28137211-28137291)
chr6 (387-465)||(3038729-3038806)
chr6 (408-466)||(5406025-5406083)
chr6 (408-466)||(5408892-5408950)
chr6 (408-466)||(5410350-5410408)
chr6 (408-466)||(5413217-5413275)
chr6 (383-449)||(14521476-14521541)
chr6 (412-466)||(9182857-9182911)
chr6 (80-219)||(14759366-14759504)
chr6 (80-220)||(20382975-20383114)
chr6 (382-466)||(33160147-33160231)
chr6 (94-154)||(13105530-13105590)
chr6 (383-466)||(16452125-16452208)
chr6 (41-126)||(7826403-7826485)
chr6 (41-126)||(10800301-10800383)
chr6 (41-126)||(10807012-10807094)
chr6 (41-126)||(14118288-14118370)
chr6 (41-126)||(14122246-14122328)
chr6 (41-126)||(24908836-24908918)
chr6 (382-437)||(17758349-17758405)
chr6 (385-466)||(16569307-16569389)
chr6 (80-126)||(1051629-1051675)
chr6 (408-466)||(2171349-2171407)
chr6 (385-466)||(31404474-31404555)
chr6 (400-437)||(3808510-3808547)
chr6 (81-126)||(18766098-18766143)
chr6 (408-466)||(3072579-3072637)
chr6 (384-437)||(21589255-21589309)
chr6 (408-466)||(30834356-30834414)
chr6 (408-437)||(5043953-5043982)
chr6 (385-437)||(17763316-17763369)
chr6 (408-437)||(22963531-22963560)
chr6 (408-437)||(23824833-23824862)
[»] scaffold0066 (1 HSPs)
scaffold0066 (377-466)||(20208-20295)
[»] scaffold0016 (1 HSPs)
scaffold0016 (382-466)||(114891-114974)
[»] scaffold0006 (1 HSPs)
scaffold0006 (387-466)||(148914-148992)
[»] scaffold0265 (1 HSPs)
scaffold0265 (81-126)||(17536-17581)
[»] scaffold0286 (1 HSPs)
scaffold0286 (408-466)||(11854-11912)
[»] scaffold0045 (2 HSPs)
scaffold0045 (80-126)||(8888-8934)
scaffold0045 (80-126)||(2506-2552)
[»] scaffold0012 (1 HSPs)
scaffold0012 (80-126)||(202810-202856)
[»] scaffold0002 (1 HSPs)
scaffold0002 (408-466)||(434822-434880)
[»] scaffold0291 (1 HSPs)
scaffold0291 (81-126)||(1475-1520)
[»] scaffold0491 (2 HSPs)
scaffold0491 (382-458)||(10957-11031)
scaffold0491 (380-458)||(8529-8605)
[»] scaffold0176 (1 HSPs)
scaffold0176 (381-434)||(17789-17843)
[»] scaffold0466 (1 HSPs)
scaffold0466 (408-437)||(7649-7678)
[»] scaffold0219 (1 HSPs)
scaffold0219 (382-466)||(27247-27328)


Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 220 - 466
Target Start/End: Original strand, 23391547 - 23391793
Alignment:
Q  220 gctaaatctatatgtttgataataaagatatatgtgacgtttgatcaataaagtctaatccaaacagttttacttctctgtctaatctcgttttatttac 319  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23391547 gctaaatctgtatgtttgataataaagatatatgtgacgtttgatcaataaagtctaatcccaacagttttacttctctgtctaatctcgttttatttac 23391646  T
Q  320 cgcattatagttcaaatagttttcataacaaataattttataaacccttaacttagaatgataattgttgtgaattcggacacaaaactcacaccaatac 419  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  23391647 cgcattatagttcaaatagttttcataacaaataattttataaacccttaacatagaatgataattgttgtgaattcgaacacaaaactcacaccaatac 23391746  T
Q  420 aaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  23391747 aaactatgatgtgtggagaaaaggaaagtaataaccaatatcaaagt 23391793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 23391249 - 23391457
Alignment:
Q  13 aatatatgattctagttattcatgatatttgatgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23391249 aatatatgattctagttattcatgatatttgatgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaat 23391348  T
Q  113 ctaggttagaataacatctattaaactctaaatactagaaatggttttagcttttgataatcacagcgttatgtatcaaatattaatgctattgtattgt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23391349 ctaggttagaataacatctattaaactctaaatactagaaatggttttagcttttgataatcaca-cgttatgtatcaaatattaatgctattgtattgt 23391447  T
Q  213 ttaataggct 222  Q
    ||||||||||    
T  23391448 ttaataggct 23391457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 13 - 220
Target Start/End: Original strand, 23430763 - 23430966
Alignment:
Q  13 aatatatgattctagttattcatgatatttgatgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaat 112  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  23430763 aatatatgattctagctattcatgatatttaatgttattcttgtttactatgcttttgattttatagttttgaattgttattgaaaattactttttgaat 23430862  T
Q  113 ctaggttagaataacatctattaaactctaaatactagaaatggttttagcttttgataatcacagcgttatgtatcaaatattaatgctattgtattgt 212  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||| |   ||||||||||||| |||||| || ||||||||    
T  23430863 ctaggttag-ataacatctattaaactctaaatactagaaatggtttttggttttgataatcata---ttatgtatcaaatcttaatgttactgtattgt 23430958  T
Q  213 ttaatagg 220  Q
    ||||||||    
T  23430959 ttaatagg 23430966  T

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Target: chr3; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 224 - 384
Target Start/End: Original strand, 23431067 - 23431227
Alignment:
Q  224 aatctatatgtttgataataaagatatatgtgacgtttgatcaataaagtctaatccaaacagttttacttctctgtctaatctcgttttatttaccgca 323  Q
    |||||||||||||||| || |||||||||| |||||||| ||||| ||||||||||| |  | |||||  |||||||| |||||||||||||||||||||    
T  23431067 aatctatatgtttgatcatgaagatatatgcgacgtttggtcaatgaagtctaatcccagtatttttatgtctctgtccaatctcgttttatttaccgca 23431166  T
Q  324 ttatagttcaaatagttttcataacaaataattttataaacccttaacttagaatgataat 384  Q
    | |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  23431167 taatagttcaaatagttttcataacaaagaatcttataaacccttaacttagaatgataat 23431227  T

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Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 384 - 466
Target Start/End: Complemental strand, 29813431 - 29813349
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  29813431 ttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaagaaaagtagtaactaatatcaaagt 29813349  T

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Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 384 - 465
Target Start/End: Original strand, 29196188 - 29196269
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaag 465  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  29196188 ttgttgtgaattcggactcaaatctcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaag 29196269  T

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Target: chr3; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 22834804 - 22834887
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  22834804 aattgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 22834887  T

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Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 23410128 - 23410212
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||| |||||| ||||  ||||||||||    
T  23410128 aattgttgtgaattcggacacaaaactcacatcaatacaaactatgatgtgtggatcaaaggaaagtagtaacatatatcaaagt 23410212  T

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Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 382 - 466
Target Start/End: Complemental strand, 40734868 - 40734785
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| | ||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  40734868 aattgttgtgaattcggtctcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 40734785  T

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Target: chr3; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 39153162 - 39153245
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||| |||||||| | |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||| |||||||    
T  39153162 attgttgagaattcgggctcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagt 39153245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 385 - 465
Target Start/End: Original strand, 9666270 - 9666349
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaag 465  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| ||||||| |||| |||||| |||||||||||||||    
T  9666270 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatctgtggagcaaaggaaagtagtaaccaatatcaaag 9666349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 384 - 466
Target Start/End: Complemental strand, 761212 - 761132
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||||||    
T  761212 ttgttgtgaattcggactcaaa--tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaaaatcaaagt 761132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 382 - 465
Target Start/End: Complemental strand, 29811240 - 29811157
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaag 465  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||| ||||||| |||| |||||| |||||||| ||||||    
T  29811240 aattgttgtgaattcgaactcaaaactcacaccaatacaaaatatgatttgtggagcaaaggaaagtagtaaccaatttcaaag 29811157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 44700283 - 44700364
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||| ||||||||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||||    
T  44700283 ttgttttgaattcggactcaaaa-tcacaccaatacaaactatgatgcatggagcaaagaaaagtagtaaccaatatcaaagt 44700364  T

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Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 466
Target Start/End: Complemental strand, 7762638 - 7762554
Alignment:
Q  382 aattgttgtgaattc-ggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||| ||||| |||| ||||||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  7762638 aattgttgtcaattcaggactcaaaact-acaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 7762554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 9635920 - 9636004
Alignment:
Q  382 aattgttgtgaattc-ggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||| || | ||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  9635920 aattgttgtgaattccggtctcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 9636004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 382 - 466
Target Start/End: Complemental strand, 32891461 - 32891378
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||| ||||||| ||||||||||||||||  |||||||||||||||||| |||| |||||| |||||||||| |||||    
T  32891461 aattgttgtgacttcggactcaaaactcacaccaatg-aaactatgatgtgtggagcaaaggaaagtagtaaccaatattaaagt 32891378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 385 - 464
Target Start/End: Original strand, 2074883 - 2074960
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaa 464  Q
    |||||||||||||||| ||||| ||||||||||| |||||||||||||||||| |||| |||||| ||||||||||||||    
T  2074883 tgttgtgaattcggacccaaaa-tcacaccaata-aaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaa 2074960  T

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Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 5236256 - 5236337
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| | || |||||| ||| | ||||||||||    
T  5236256 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagtacaggaaagtagtaatcgatatcaaagt 5236337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 7764834 - 7764753
Alignment:
Q  385 tgttgtgaattc-ggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| |||| ||||||| ||||||||||||||||||||||||| || |||| |||||| ||||||||||||||||    
T  7764834 tgttgtgaattccggactcaaaact-acaccaatacaaactatgatgtgtgaagtaaaggaaagtagtaaccaatatcaaagt 7764753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 404 - 466
Target Start/End: Original strand, 19683706 - 19683768
Alignment:
Q  404 aaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||||    
T  19683706 aaactcacaccaatacaaactatgatgtttggagcaaaggaaagtagtaaccaatatcaaagt 19683768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 27305519 - 27305597
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| ||||| |||||||||||  ||||||||||||||||| |||| |||||| ||||||||||||||||    
T  27305519 tgttgtgaattcggactcaaaa-tcacaccaata--aactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 27305597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 466
Target Start/End: Complemental strand, 40735751 - 40735670
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||   ||||| ||||||||||||||| |||||||||||||| |||| |||||| ||||||||||||||||    
T  40735751 ttgttgtgaattcggtatcaaaa-tcacaccaatacaaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 40735670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 382 - 431
Target Start/End: Original strand, 4160056 - 4160105
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgt 431  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4160056 aattgttgtgaattcggactcaaaactcacaccaatacaaactatgatgt 4160105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 18867252 - 18867192
Alignment:
Q  66 ttttgattttataaatttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    ||||||||||||  ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  18867252 ttttgattttatggatttgaattgttattcaaaaataccttttgaatctaggttagaataa 18867192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 383 - 466
Target Start/End: Complemental strand, 31314810 - 31314728
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| | ||| ||||| |||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||||    
T  31314810 attgttgtgaataccgactcaaaa-tcacaccaatacaaactatgatgtatggagcaaaggaaagtaataactaatattaaagt 31314728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 383 - 466
Target Start/End: Complemental strand, 51399184 - 51399102
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||| ||||| ||| |||||||||||||||||||| ||||| |||| ||||||  || ||||||||||||    
T  51399184 attgttgtgaattcggactcaaaa-tcataccaatacaaactatgatgtatggagcaaaggaaagtagaaaacaatatcaaagt 51399102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 9581652 - 9581571
Alignment:
Q  385 tgttgtgaattc-ggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| |||| ||||| ||||||||||| ||||||||||||||| || |||| |||||| ||||||||||||||||    
T  9581652 tgttgtgaattccggactcaaaa-tcacaccaatataaactatgatgtgtgaagcaaaggaaagtagtaaccaatatcaaagt 9581571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 29682726 - 29682644
Alignment:
Q  385 tgttgtgaattcggacacaaaac-tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| |||||||||  |||||||||||||||||||||||||||||| |||| |||||| ||| ||| || |||||    
T  29682726 tgttgtgaattccgacacaaaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaatcaaaattaaagt 29682644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 382 - 462
Target Start/End: Complemental strand, 37407060 - 37406981
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatca 462  Q
    ||||||||||||||||| | ||||  |||||||| |||||| |||||||||||||| |||| |||||| ||||||||||||    
T  37407060 aattgttgtgaattcggcctcaaag-tcacaccactacaaaatatgatgtgtggagcaaaggaaagtagtaaccaatatca 37406981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 4675423 - 4675341
Alignment:
Q  41 ttgatgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||| ||||||||||||||| ||   |||||| ||||  |||||||| || |||||||||||| ||||||||||||||||||||||    
T  4675423 ttgaggttattcttgttttccat---tttgatcttatggatttgaatcgtgattgaaaaataccttttgaatctaggttagaataa 4675341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 5257966 - 5258024
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| ||||||||||||||||| |||| |||||| ||||||||| ||||||    
T  5257966 tcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagt 5258024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 9634644 - 9634701
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||    
T  9634644 tcacaccaatacaaactatgat-tgtggagcaaaggaaagtagtaaccaatatcaaagt 9634701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 45095509 - 45095451
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||| |||||||||||||||||||| ||| |||| |||||| ||||||||||||||||    
T  45095509 tcacatcaatacaaactatgatgtgtagagcaaaggaaagtagtaaccaatatcaaagt 45095451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 21350811 - 21350891
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| ||||||||||||||||  |||  | |||||||| || |||| |||||| ||||||||||||||||    
T  21350811 tgttgtgaattcggactcaaaactcacaccaat-gaaataaagatgtgtgaagcaaaggaaagtagtaaccaatatcaaagt 21350891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 37408827 - 37408747
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||| | ||||  ||||| ||||||||| |||||||||||||| |||| |||||| |||||||||| |||||    
T  37408827 tgttgtgaattcggcctcaaag-tcacatcaatacaaaatatgatgtgtggagcaaaggaaagtagtaaccaatattaaagt 37408747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 23199935 - 23200017
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||| |  ||||||| |||||||||||||| |||||| ||||||| |||| |||||| ||||||||| ||||||    
T  23199935 aattgttgtgaattccgt-acaaaac-cacaccaatacaaagtatgatatgtggagcaaaggaaagtagtaaccaataacaaagt 23200017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 466
Target Start/End: Original strand, 5260149 - 5260203
Alignment:
Q  412 accaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||| ||||||||||||||||| |||| |||||| ||||||||| ||||||    
T  5260149 accaatacgaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagt 5260203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 16499360 - 16499302
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||| ||||||||||||| |||||||||| |||| |||||| ||||||| ||||||||    
T  16499360 tcacatcaatacaaactataatgtgtggagcaaaggaaagtagtaaccaacatcaaagt 16499302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 51351940 - 51352020
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| ||||| ||||| ||||| | |||| ||||||||||| |||| |||||  ||||||||||||||||    
T  51351940 ttgttgtgaattcggactcaaaa-tcacatcaata-atactacgatgtgtggagcaaaggaaagtggtaaccaatatcaaagt 51352020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 385 - 437
Target Start/End: Original strand, 6095390 - 6095443
Alignment:
Q  385 tgttgtgaattcgg-acacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    |||||||||||||| || ||||  ||||||||||||||||||||||||||||||    
T  6095390 tgttgtgaattcgggactcaaatttcacaccaatacaaactatgatgtgtggag 6095443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 459
Target Start/End: Original strand, 23197743 - 23197817
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaata 459  Q
    |||||||||||||| |  ||||||| |||||||||||||| |||||| ||||||| |||| |||||| |||||||||    
T  23197743 attgttgtgaattccgt-acaaaac-cacaccaatacaaagtatgatatgtggagcaaaggaaagtagtaaccaata 23197817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 43403527 - 43403583
Alignment:
Q  382 aattgttgtgaattc-ggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    ||||||||||||||| ||||  |||  ||||||||||||||||||||||||||||||    
T  43403527 aattgttgtgaattccggactaaaatttcacaccaatacaaactatgatgtgtggag 43403583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 4501572 - 4501526
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||| ||||||||||||||||||| |||||||||||| | |||||||    
T  4501572 atttaaattgttattgaaaaatacattttgaatctagttgagaataa 4501526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 420
Target Start/End: Complemental strand, 44330988 - 44330950
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaataca 420  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  44330988 aattgttgtgaattcggactcaaaactcacaccagtaca 44330950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 27900983 - 27900938
Alignment:
Q  81 tttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||||| ||||||| ||||| || ||||||||||||||||||||||    
T  27900983 tttgaaatgttatttaaaaaaaccttttgaatctaggttagaataa 27900938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 34491557 - 34491508
Alignment:
Q  388 tgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    ||||||||||||| ||||  | ||||||||||||||||| ||||||||||    
T  34491557 tgtgaattcggactcaaattttacaccaatacaaactataatgtgtggag 34491508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 456
Target Start/End: Complemental strand, 801436 - 801388
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataacca 456  Q
    |||||||||||| || |||||||||||||| |||| |||||| ||||||    
T  801436 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaacca 801388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 6817329 - 6817365
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctag 116  Q
    ||||||| || ||||||||||||||||||||||||||    
T  6817329 atttgaaatgatattgaaaaatactttttgaatctag 6817365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 437
Target Start/End: Complemental strand, 40913646 - 40913594
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    |||||||||||||||| ||||  |||||||||||||||| || ||||| ||||    
T  40913646 tgttgtgaattcggactcaaatttcacaccaatacaaacaataatgtgcggag 40913594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 437
Target Start/End: Complemental strand, 47304629 - 47304578
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    |||| |||||||||||  |||| ||||| ||||||||||||||||||||||||    
T  47304629 tgttctgaattcggacttaaaa-tcacaacaatacaaactatgatgtgtggag 47304578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 5e-51; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 45 - 221
Target Start/End: Complemental strand, 2785167 - 2784994
Alignment:
Q  45 tgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaatctaggttagaataacatctattaaactctaaa 144  Q
    ||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||  |  |||||    
T  2785167 tgttattcttgctttctatgcttttgatcttatagatttgaattgttattgaaaaataccttttgagtctaggttagaataacatctattggatcctaaa 2785068  T
Q  145 tactagaaatggttttagcttttgataatcacagcgttatgtatcaaatattaatgctattgtattgtttaataggc 221  Q
     ||||||||||||||||| ||||||||| ||||   | ||||||||| | |||||||||||||||||||||||||||    
T  2785067 cactagaaatggttttaggttttgataaccaca---tcatgtatcaagtcttaatgctattgtattgtttaataggc 2784994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 47675936 - 47676017
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  47675936 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 47676017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 384 - 466
Target Start/End: Complemental strand, 23555411 - 23555329
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  23555411 ttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 23555329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 383 - 466
Target Start/End: Complemental strand, 18127017 - 18126934
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| ||| ||||||||||||    
T  18127017 attgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagtaaaggaaagtagtaatcaatatcaaagt 18126934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 26417685 - 26417604
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||    
T  26417685 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatatgtggagtaaaggaaagtagtaaccaatatcaaagt 26417604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 2759012 - 2758882
Alignment:
Q  88 tgttattgaaaaatactttttgaatctaggttagaataacatctattaaactctaaatactagaaatggttttagcttttgataatcacagcgttatgta 187  Q
    |||||||||||||||| |||||| |||||||||||||||||| ||||  |  ||||| ||||||||||||||||| ||||||||| ||||   | |||||    
T  2759012 tgttattgaaaaataccttttgagtctaggttagaataacatatattggatcctaaacactagaaatggttttaggttttgataaccaca---tcatgta 2758916  T
Q  188 tcaaatattaatgctattgtattgtttaataggc 221  Q
    |||| | |||||| ||||||| ||||||||||||    
T  2758915 tcaagtcttaatgttattgtagtgtttaataggc 2758882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 14069631 - 14069714
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||| ||| |||||||    
T  14069631 attgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaatttcaaagt 14069714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 14379659 - 14379742
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||| ||| |||||||    
T  14379659 attgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaatttcaaagt 14379742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 47673743 - 47673825
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||  |||||| ||||||||||||||||    
T  47673743 ttgttatgaattcggacacaaaactcacaccaatacaaactatgatgtgtggaacaaaagaaagtagtaaccaatatcaaagt 47673825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 41648813 - 41648894
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||    
T  41648813 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaatatcaaagt 41648894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 19502547 - 19502466
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||||||||||| |||| |||||| |||||||| |||||||    
T  19502547 tgttgtgaattcagactcaaaactcacactaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagt 19502466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 31105200 - 31105280
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||| |||||| ||| ||||||||||||    
T  31105200 tgttgtgaattcgaacacaaaactcacaccaata-aaactatgatgtgtggagtaaaggaaagtagtaatcaatatcaaagt 31105280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 31732768 - 31732849
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||  |||||| |||||||| |||||||    
T  31732768 tgttgtgaattcggactcaaaactcacaccagtacaaactatgatgtgtggagcaaatgaaagtagtaaccaatttcaaagt 31732849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 41317238 - 41317319
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||| || |||| ||||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||||    
T  41317238 tgttgtgaattcgaactcaaatctcacaccaatacaaactatgatgtttggagcaaaggaaagtagtaaccaatatcaaagt 41317319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 389 - 466
Target Start/End: Complemental strand, 43864609 - 43864532
Alignment:
Q  389 gtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||  ||| ||||||||||||    
T  43864609 gtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagtaaaggaaagtggtaatcaatatcaaagt 43864532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 48489798 - 48489719
Alignment:
Q  386 gttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||||||||||| |||| |||||| ||||||||||||||||    
T  48489798 gttgtgaattcggactcaaaa-tcacaccaataccaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 48489719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 382 - 437
Target Start/End: Complemental strand, 6430499 - 6430444
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6430499 aattgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggag 6430444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 29991399 - 29991341
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  29991399 tcacaccaatacaaactatgatgtgtggagcaaagaaaagtagtaaccaatatcaaagt 29991341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 4586538 - 4586449
Alignment:
Q  377 atgataattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||| |||||||||||||||||| |||| |||||||||||  |||||||||||||||||| |||| |||||  |||||||| |||||||    
T  4586538 atgattattgttgtgaattcggactcaaatctcacaccaatgtaaactatgatgtgtggagcaaaggaaagtggtaaccaatttcaaagt 4586449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 465
Target Start/End: Original strand, 36146211 - 36146291
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaag 465  Q
    ||||||||||||||||| ||||| | |||| ||||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  36146211 ttgttgtgaattcggactcaaaatt-acacaaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaag 36146291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 466
Target Start/End: Complemental strand, 27348186 - 27348105
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| ||||| |||||| |||||||| |||||||||||||| |||| ||||||  |||||||||||||||    
T  27348186 ttgttgtgaattcggactcaaaa-tcacacaaatacaaattatgatgtgtggagcaaaggaaagtagcaaccaatatcaaagt 27348105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 1114021 - 1113940
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| ||  ||||||||||| |||||||||||||||||||||||| |||| |||||  |||| |||||||||||    
T  1114021 tgttgtgaattccgaatcaaaactcacatcaatacaaactatgatgtgtggagcaaaggaaagtggtaactaatatcaaagt 1113940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 25616223 - 25616143
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||| || || ||||| |||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||||    
T  25616223 tgttgtgaatacgtactcaaaa-tcacaccaatacaaactatgatgtatggagcaaaggaaagtagtaaccaatatcaaagt 25616143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 38671025 - 38671105
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| ||| || |||| || ||||||||    
T  38671025 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaaatagtaacaaaaatcaaagt 38671105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 437
Target Start/End: Original strand, 4510335 - 4510391
Alignment:
Q  381 taattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    |||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  4510335 taattgttgtgaattcggactcaaatttcacaccaatacaaactatgatgtgtggag 4510391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 437
Target Start/End: Original strand, 4512177 - 4512233
Alignment:
Q  381 taattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    |||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  4512177 taattgttgtgaattcggactcaaatttcacaccaatacaaactatgatgtgtggag 4512233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 4179119 - 4179061
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||||||||||||||| |||| |||||| ||||||||| ||||||    
T  4179119 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagt 4179061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 31849146 - 31849200
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggttagaataacatctatt 134  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  31849146 atttgaattgttattgaaaagtagcttttgaatctaggttagaataacatctatt 31849200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 35854262 - 35854204
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||| ||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  35854262 tcacacaaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 35854204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 8153705 - 8153625
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||| |||||||||| ||||| |||||| |||||||||||||||| |||||| |||| |||||| ||| ||||||||||||    
T  8153705 tgttgggaattcggactcaaaa-tcacactaatacaaactatgatgcgtggagcaaaggaaagtagtaatcaatatcaaagt 8153625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 48491944 - 48491864
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||  ||||| |||||||||||| |||||| ||||| |||| |||| |||||| ||||||||||||||||    
T  48491944 tgttgtgaattcggattcaaaa-tcacaccaataccaactataatgtgcggagtaaaggaaagtagtaaccaatatcaaagt 48491864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 41542957 - 41542875
Alignment:
Q  41 ttgatgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||| ||||||||||||||| ||   |||||| ||||  |||||||| || |||||||||||| ||||||||||||||||||||||    
T  41542957 ttgaggttattcttgttttccat---tttgatcttatggatttgaatcgtgattgaaaaataccttttgaatctaggttagaataa 41542875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 387 - 437
Target Start/End: Original strand, 2360774 - 2360824
Alignment:
Q  387 ttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||||    
T  2360774 ttgtgaatttggactcaaaattcacaccaatacaaactatgatgtgtggag 2360824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 25766779 - 25766837
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| || |||||||||||||| ||||||||||| ||||||||| ||||||    
T  25766779 tcacaccaatacgaaatatgatgtgtggagcaaagaaaagtagtaaccaataacaaagt 25766837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 41454680 - 41454726
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||    
T  41454680 atttgaattgttattgaaaaatactttttgaatctagttgagaataa 41454726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 23344332 - 23344253
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| ||| ||||| ||||| ||||| |||||||||||||||||| |||| |||||| ||||||||||| ||||    
T  23344332 tgttgtgaattcagacccaaaa-tcacatcaata-aaactatgatgtgtggagcaaaggaaagtagtaaccaatatccaagt 23344253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 43364703 - 43364658
Alignment:
Q  81 tttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||    
T  43364703 tttgaaatgttattgaaaaataccttttgaatctaggttagaataa 43364658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 28442943 - 28442861
Alignment:
Q  41 ttgatgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||| ||||||||||||||| ||   |||||| ||||  |||||||| || |||||||||||| |||||||| |||||||||||||    
T  28442943 ttgaggttattcttgttttccat---tttgatcttatggatttgaatcgtgattgaaaaataccttttgaatttaggttagaataa 28442861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 495810 - 495868
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||| |||||||| |||||| ||||||| |||| |||||| ||||||||||||||||    
T  495810 tcacactaatacaaattatgatatgtggagcaaaggaaagtagtaaccaatatcaaagt 495868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 48409153 - 48409095
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| || |||||||||||||| |||| |||||| ||||||||| ||||||    
T  48409153 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccaataacaaagt 48409095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 9702194 - 9702149
Alignment:
Q  81 tttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||    
T  9702194 tttgaaatgttattgaaaaataccttttgattctaggttagaataa 9702149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 465
Target Start/End: Original strand, 24525328 - 24525385
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaag 465  Q
    ||||| |||||||||||||||| |||| || ||||||||||| ||| |||||||||||    
T  24525328 tcacatcaatacaaactatgatatgtgtagcaaagaaaagtagtaatcaatatcaaag 24525385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 30814771 - 30814718
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    ||||||||||||||||| ||||  |||||||| |||||| ||||||||||||||    
T  30814771 ttgttgtgaattcggactcaaatttcacaccagtacaaaatatgatgtgtggag 30814718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 37522255 - 37522210
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggttagaata 125  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||    
T  37522255 atttgaattgttattgaaaaataccctttgaatctagtttagaata 37522210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 437
Target Start/End: Complemental strand, 22270321 - 22270269
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    |||| ||||||||||| ||||  ||||| ||||||||||||||||||||||||    
T  22270321 tgttatgaattcggactcaaatttcacagcaatacaaactatgatgtgtggag 22270269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 32357847 - 32357902
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaa--ctatgatgtgtggag 437  Q
    ||||||||||||||||||||||  |||||||||||||||   ||||||||||||||    
T  32357847 ttgttgtgaattcggacacaaatttcacaccaatacaaattatatgatgtgtggag 32357902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 12096964 - 12097045
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||| ||||||||||||| ||||| |||||||| || |||||||||||  ||||  |||| |||||| ||||||||||||||||    
T  12096964 attgctgtgaattcggactcaaaa-tcacacca-tataaactatgatgcttggaataaaggaaagtagtaaccaatatcaaagt 12097045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 116
Target Start/End: Original strand, 26840786 - 26840829
Alignment:
Q  73 tttataaatttgaattgttattgaaaaatactttttgaatctag 116  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||    
T  26840786 tttatgaatttgaattgttattgagaaataccttttgaatctag 26840829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 48455840 - 48455794
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    ||||||||||||||||||| |||| |||||||||||| | |||||||    
T  48455840 atttgaattgttattgaaagataccttttgaatctagttaagaataa 48455794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 6e-32; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 22600410 - 22600296
Alignment:
Q  40 tttgatgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaatctaggttagaataacatctattaaact 139  Q
    |||||||||||||||| ||||||||| ||| || ||||  |||||||||||||||||||||||| ||||||||||||||||||||||  |||||| ||||    
T  22600410 tttgatgttattcttgatttctatgcatttaatcttatggatttgaattgttattgaaaaatacgttttgaatctaggttagaataatgtctattgaact 22600311  T
Q  140 ctaaatactagaaat 154  Q
    |||||| ||||||||    
T  22600310 ctaaattctagaaat 22600296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 382 - 463
Target Start/End: Complemental strand, 11690859 - 11690778
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaa 463  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||| ||||||||    
T  11690859 aattgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaatatcaa 11690778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 723544 - 723627
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  723544 aattgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 723627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 34139572 - 34139653
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  34139572 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 34139653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 380 - 466
Target Start/End: Original strand, 17057164 - 17057249
Alignment:
Q  380 ataattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| ||| |||| |||||| ||||||||||||||||    
T  17057164 ataattgttgtgaattcggactcaaaa-tcacaccaatacaaaatatgatgtgtagagcaaaggaaagtagtaaccaatatcaaagt 17057249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 380 - 466
Target Start/End: Original strand, 17085147 - 17085232
Alignment:
Q  380 ataattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| ||| |||| |||||| ||||||||||||||||    
T  17085147 ataattgttgtgaattcggactcaaaa-tcacaccaatacaaaatatgatgtgtagagcaaaggaaagtagtaaccaatatcaaagt 17085232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 36987874 - 36987955
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| |||||||| |||||||    
T  36987874 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagt 36987955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 381 - 466
Target Start/End: Original strand, 5723052 - 5723136
Alignment:
Q  381 taattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| |  |||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  5723052 taattgttgtgaattccgt-acaaaaatcacaccaatacaaactatgatgtgtggagcaaagtaaagtagtaaccaatatcaaagt 5723136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 6594804 - 6594884
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  6594804 tgttgtgaatttggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaagtaaagtagtaaccaatatcaaagt 6594884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 11151395 - 11151476
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||| || ||||||||| |||||||||||||||||||||||||| ||| ||||||| ||| ||||||||||||    
T  11151395 tgttgtgaattcgaactcaaaactcataccaatacaaactatgatgtgtggagcaaataaaagtagtaatcaatatcaaagt 11151476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 42362713 - 42362633
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||||||    
T  42362713 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaaaatcaaagt 42362633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 385 - 465
Target Start/End: Original strand, 33162254 - 33162333
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaag 465  Q
    |||||||||||||||| ||||| ||||| |||||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  33162254 tgttgtgaattcggactcaaaa-tcacatcaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaag 33162333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 464
Target Start/End: Complemental strand, 13122124 - 13122049
Alignment:
Q  387 ttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaa 464  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| ||| ||||||||||    
T  13122124 ttgtgaattcggacacaaaa-tcacaccaata-aaactatgatgtgtggagtaaagaaaagtactaatcaatatcaaa 13122049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 24885953 - 24885873
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||| ||| || ||||||||||||||||    
T  24885953 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtgtagcaaaggaaaatagtaaccaatatcaaagt 24885873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 39285202 - 39285122
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||  |||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||| |||||||    
T  39285202 tgttgtgaattcggacttaaaactcataccaatacaa-ctatgatgtgtggagcaaagaaaagtagtaaccaatttcaaagt 39285122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 385 - 465
Target Start/End: Complemental strand, 36773926 - 36773847
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaag 465  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||||||||| |||  |||||| |||||||||||||||    
T  36773926 tgttgtgaattcggattcaaaa-tcacaccaatacaaactatgatgtgtggagcaaatgaaagtagtaaccaatatcaaag 36773847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 383 - 466
Target Start/End: Complemental strand, 2838315 - 2838233
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||| ||||||||||||||||||||||||| | ||| |||||||||||| |||| |||||| |||||| |||||||||    
T  2838315 attgttgtgagttcggacacaaaactcacaccaata-atactttgatgtgtggagtaaaggaaagtagtaaccactatcaaagt 2838233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 33034247 - 33034165
Alignment:
Q  41 ttgatgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||| ||||||||||||||| ||   |||||| ||||  |||||||||||||||||||||||| ||||||||||||||||||||||    
T  33034247 ttgaggttattcttgttttccat---tttgatcttatggatttgaattgttattgaaaaataccttttgaatctaggttagaataa 33034165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 380 - 466
Target Start/End: Original strand, 2334213 - 2334298
Alignment:
Q  380 ataattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||| |||||||||||| ||| ||||| ||||||||||||||||||||||||||| || |||| |||||| |||||||| |||||||    
T  2334213 ataactgttgtgaattcagactcaaaa-tcacaccaatacaaactatgatgtgtgaagcaaaggaaagtagtaaccaatttcaaagt 2334298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 14633627 - 14633708
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||| ||| ||| ||||| ||||||||||||||||||||||||||| || |||| |||||| ||||||||||||||||    
T  14633627 ttgttgtgatttcagactcaaaa-tcacaccaatacaaactatgatgtgtgaagcaaaggaaagtagtaaccaatatcaaagt 14633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 385 - 458
Target Start/End: Complemental strand, 29868237 - 29868164
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaat 458  Q
    |||||||||||||||| ||||  ||||| |||||||||||||||||||||||| ||||||||||| ||| ||||    
T  29868237 tgttgtgaattcggactcaaatttcacagcaatacaaactatgatgtgtggagcaaagaaaagtagtaatcaat 29868164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 36317811 - 36317894
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||| |||| |||||||||||||||||||||| ||||||||| ||  |||  |||||| |||||||| |||||||    
T  36317811 attgttgtgaatttggactcaaaactcacaccaatacaaacaatgatgtgtagaacaaatgaaagtagtaaccaatttcaaagt 36317894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 466
Target Start/End: Complemental strand, 38312608 - 38312528
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||| ||||||| ||||| ||||||||||| |||| ||||||||||||| |||| |||||| ||||||||||||||||    
T  38312608 ttgttgtga-ttcggactcaaaa-tcacaccaatataaacaatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 38312528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 13498029 - 13497952
Alignment:
Q  140 ctaaatactagaaatggttttagcttttgataatcacagcgttatgtatcaaatattaatgctattgtattgtttaataggc 221  Q
    ||||||||||||||||||||||| |||||||||||||    ||| ||||||| | || ||| ||||||||||||||||||||    
T  13498029 ctaaatactagaaatggttttaggttttgataatcac----ttaagtatcaactcttcatgttattgtattgtttaataggc 13497952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 44611740 - 44611658
Alignment:
Q  41 ttgatgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||| ||||||||||||||| ||   |||||| ||||  |||||||| || |||||||||||| ||||||||||||||||||||||    
T  44611740 ttgaggttattcttgttttccat---tttgatcttatggatttgaatcgtgattgaaaaataccttttgaatctaggttagaataa 44611658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 4502955 - 4503013
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||| |||||||||| |||| |||||| ||||||||| ||||||    
T  4502955 tcacaccaatacaaactataatgtgtggagtaaaggaaagtagtaaccaataacaaagt 4503013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 384 - 466
Target Start/End: Complemental strand, 11049913 - 11049833
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||| ||||||| ||||| ||||||||||| ||||||||||| |||||| |||  |||||| ||||||||||||||||    
T  11049913 ttgttgtgagttcggacgcaaaa-tcacaccaata-aaactatgatgcgtggagcaaaagaaagtagtaaccaatatcaaagt 11049833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 14202223 - 14202304
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||  ||||| ||| ||||| |||||||||||| ||||||| |||| |||||| ||| ||||||||||||    
T  14202223 ttgttgtgaattcggagtcaaaa-tcataccaacacaaactatgatatgtggagtaaaggaaagtagtaatcaatatcaaagt 14202304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 36205487 - 36205545
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||| ||||||||||||||||||||||| |||| |||||| ||||||||| ||||||    
T  36205487 tcacactaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagt 36205545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 45100100 - 45100042
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| || |||||||||||||| |||| |||||| ||||||||||||||||    
T  45100100 tcacaccaatacgaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 45100042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 22197847 - 22197904
Alignment:
Q  66 ttttgattttataaatttgaattgttattgaaaaatactttttgaatctaggttagaa 123  Q
    ||||||| |||| |||||  ||||||||| ||||||||||||||||||||||||||||    
T  22197847 ttttgatcttatgaatttagattgttattaaaaaatactttttgaatctaggttagaa 22197904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 419 - 466
Target Start/End: Complemental strand, 11067635 - 11067588
Alignment:
Q  419 caaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  11067635 caaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 11067588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 4484150 - 4484208
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| || |||||||||||||| |||| |||||| ||||||||| ||||||    
T  4484150 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccaataacaaagt 4484208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 119
Target Start/End: Original strand, 34745058 - 34745097
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggtt 119  Q
    ||||||| || |||||||||||||||||||||||||||||    
T  34745058 atttgaaatgatattgaaaaatactttttgaatctaggtt 34745097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 32289937 - 32289856
Alignment:
Q  385 tgttgtgaattcgga-cacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| || | |||||| |||||||||||||| || ||||||||||| |||| |||||| |||||| || ||||||    
T  32289937 tgttgtgaattccgatctcaaaac-cacaccaatacaaagtaagatgtgtggagcaaaggaaagtagtaaccactaacaaagt 32289856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 43670228 - 43670182
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||||||||||||||||||||||| |||| ||||||| | |||||||    
T  43670228 atttgaattgttattgaaaaatacattttcaatctagttgagaataa 43670182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 16428513 - 16428550
Alignment:
Q  86 attgttattgaaaaatactttttgaatctaggttagaa 123  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  16428513 attgttattgaaaaatattttttgaatctaagttagaa 16428550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 28392677 - 28392621
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggttagaataacatctattaaa 137  Q
    |||| |||||||||||| |||||||||| |||||||| |||| |||| ||||||||||    
T  28392677 atttcaattgttattgacaaatactttt-gaatctagtttaggataatatctattaaa 28392621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 466
Target Start/End: Complemental strand, 4561435 - 4561358
Alignment:
Q  388 tgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggag-aaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||  |||| |||| ||||||||||||  ||||  ||||||||||  |||||||||||| ||||||||||||||||    
T  4561435 tgtgaatatggactcaaatctcacaccaata--aacttagatgtgtggaacaaaagaaaagtagtaaccaatatcaaagt 4561358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 456
Target Start/End: Complemental strand, 30833694 - 30833646
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataacca 456  Q
    |||||||||||| || |||||||||||||| |||| |||||| ||||||    
T  30833694 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaacca 30833646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 383 - 465
Target Start/End: Original strand, 3075547 - 3075629
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaag 465  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  3075547 attgttgtgaattcggactaaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtaataaccaatatcaaag 3075629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 30682721 - 30682803
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  30682721 ttgttgtgaatacggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 30682803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 382 - 466
Target Start/End: Complemental strand, 534130 - 534046
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| |||||| |||||||| |||||||    
T  534130 aattgttgtgaattcggactcaaaactcacaccaatagaaactatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagt 534046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 13488569 - 13488488
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||||||||| |||| ||||||||||||||| |||||||    
T  13488569 tgttgtgaattcggactcaaatctcacaccaatacaaaatatgatgtgtggagtaaaggaaagtaataaccaatttcaaagt 13488488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 39468348 - 39468429
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||| || ||||||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  39468348 tgttgtgaattcgaactcaaaacttacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 39468429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 42428227 - 42428311
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||  |||||| || |||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  42428227 aattgttggaaattcgaactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 42428311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 387 - 466
Target Start/End: Complemental strand, 538387 - 538308
Alignment:
Q  387 ttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| |||||||    
T  538387 ttgtgaattcagactcaaaactcacaccaatataaactatgatgtgtggagcaaaggaaagtaataaccaatttcaaagt 538308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 5887234 - 5887315
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||    
T  5887234 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatatgtggagcaaaggaaagtagtaaccaatatcaaagt 5887315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 42426034 - 42426116
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||||||||| |||  |||||| ||||||||||||||||    
T  42426034 ttgttgtgaattcgaactcaaaactcacacaaatacaaactatgatgtgtggagcaaaagaaagtagtaaccaatatcaaagt 42426116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 458
Target Start/End: Original strand, 28750455 - 28750528
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaat 458  Q
    ||||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||| |||||| ||||||||    
T  28750455 tgttgtgaatttggactcaaaactcacaccaatacaaattatgatgtgtggagcaaaggaaagtagtaaccaat 28750528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 465
Target Start/End: Complemental strand, 31183342 - 31183262
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaag 465  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||| |||| |||||| |||| ||||||||||    
T  31183342 ttgttgtgaattcggactcaaaa-tcacaccaatacaaaccatgatgtgtggagcaaaggaaagtagtaactaatatcaaag 31183262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 385 - 437
Target Start/End: Complemental strand, 40147610 - 40147558
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40147610 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggag 40147558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 387 - 454
Target Start/End: Complemental strand, 32637190 - 32637123
Alignment:
Q  387 ttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataac 454  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||| |||| |||||| ||||    
T  32637190 ttgtgaattcggattcaaaactcacaccaatacaaactatgatgtgtggagtaaaggaaagtagtaac 32637123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 33832046 - 33831966
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| ||||| | |||| ||||||||||||||||||||||| |||| |||||| ||||||| ||||||||    
T  33832046 tgttgtgaattcggactcaaaatt-acacaaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaaaatcaaagt 33831966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 466
Target Start/End: Original strand, 36073866 - 36073923
Alignment:
Q  409 cacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  36073866 cacaccaatacaaactatgatgtgtggagcaaaggaaagtaataaccaataacaaagt 36073923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 466
Target Start/End: Complemental strand, 30182962 - 30182876
Alignment:
Q  380 ataattgttgtgaattc-ggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| || | ||||| ||||||||| |||||||||||||||||||| |||| |||||| ||||||||| ||||||    
T  30182962 ataattgttgtgaattccggtctcaaaa-tcacaccaaaacaaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagt 30182876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 458
Target Start/End: Complemental strand, 19806729 - 19806658
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaat 458  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||||||| | |||| |||||| ||||||||    
T  19806729 tgttgtgaattcggactcaaaactcac--caatacaaactatgatgtgtggggcaaaggaaagtagtaaccaat 19806658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 16649635 - 16649715
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||| || ||||| ||| |||||||||||||||||||||||||| |||| |||||| ||||||  ||||||||    
T  16649635 tgttgtgaattcgaactcaaaa-tcataccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccacaatcaaagt 16649715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 458
Target Start/End: Complemental strand, 13240118 - 13240047
Alignment:
Q  386 gttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaat 458  Q
    |||||||||||| || ||||| |||||| ||||||||||||||||||||||| |||| |||||| ||||||||    
T  13240118 gttgtgaattcgaactcaaaa-tcacactaatacaaactatgatgtgtggagtaaaggaaagtagtaaccaat 13240047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 80 - 220
Target Start/End: Complemental strand, 17346689 - 17346551
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctag-gttagaataa-catctattaaactctaaatactagaaatggttttagcttttgataatcaca 177  Q
    |||||||||||||||||||||| ||||||||||||||    || |||| |||||||||||  ||||||||||||||||||||| |  |||||||||||      
T  17346689 atttgaattgttattgaaaaatgctttttgaatctagacgcaggataatcatctattaaaacctaaatactagaaatggtttt-gggtttgataatca-- 17346593  T
Q  178 gcgttatgtatcaaatattaatgctattgtattgtttaatagg 220  Q
     | ||| |||||||   || |||||||||||||| ||||||||    
T  17346592 -ctttaagtatcaagccttcatgctattgtattgcttaatagg 17346551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 40821058 - 40821140
Alignment:
Q  41 ttgatgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||| ||||||||||||||| ||   |||||| ||||  |||||||| || |||||||||||| ||||||||||||||||||||||    
T  40821058 ttgaggttattcttgttttccat---tttgatcttatggatttgaatcgtgattgaaaaataccttttgaatctaggttagaataa 40821140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 4693981 - 4694035
Alignment:
Q  79 aatttgaattgttattgaaaaatactttttgaatctaggttagaataacatctat 133  Q
    |||||||||||||||||||| |||| |||||||||||| |||||||||| |||||    
T  4693981 aatttgaattgttattgaaagataccttttgaatctagtttagaataacttctat 4694035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 9334915 - 9334961
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||    
T  9334915 atttgaattgttattgaaaaataccttttgaatctagtttagaataa 9334961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 8565748 - 8565828
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||| |||  ||||| |||||| |||| |||||||||||||||||| |||| |||||| ||||||||| ||||||    
T  8565748 tgttgtgaatttggattcaaaa-tcacactaatataaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagt 8565828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 437
Target Start/End: Complemental strand, 38747353 - 38747301
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    ||||||||||| |||| ||||  ||||||||||||||||||||||||||||||    
T  38747353 tgttgtgaatttggactcaaatttcacaccaatacaaactatgatgtgtggag 38747301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 382 - 456
Target Start/End: Original strand, 9789018 - 9789092
Alignment:
Q  382 aattgttgtgaattcgga-cacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataacca 456  Q
    ||||||||||||||| || | |||||| |||||||||||||| |||||||||||||| |||| |||||| ||||||    
T  9789018 aattgttgtgaattccgatctcaaaac-cacaccaatacaaagtatgatgtgtggagcaaaggaaagtagtaacca 9789092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 13343406 - 13343348
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||| ||||| ||||||||||||||||| |||| |||||| ||||||||| ||||||    
T  13343406 tcacactaatacgaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagt 13343348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 16409825 - 16409767
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||| |||||||||||||| |||| |||||| |||||| || ||||||    
T  16409825 tcacaccaatacaaagtatgatgtgtggagcaaaggaaagtagtaaccactaacaaagt 16409767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 25413106 - 25413048
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| ||||||||||||||||| |||| ||| || ||| ||||||| ||||    
T  25413106 tcacaccaatacgaactatgatgtgtggagcaaaggaaattagtaatcaatatccaagt 25413048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 14515118 - 14515186
Alignment:
Q  85 aattgttattgaaaaatactttttgaatctaggttagaataacatctattaaactctaaatactagaaat 154  Q
    |||||||||||| |||||| ||| |||||||| |||| |||| ||||||||||| |||||  ||||||||    
T  14515118 aattgttattgacaaataccttt-gaatctagcttaggataatatctattaaacactaaactctagaaat 14515186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 437
Target Start/End: Complemental strand, 40751351 - 40751298
Alignment:
Q  385 tgttgtgaattc-ggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    |||||||||||| ||||  ||| ||||||||||||||||||||||| |||||||    
T  40751351 tgttgtgaattccggacttaaatctcacaccaatacaaactatgatttgtggag 40751298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 437
Target Start/End: Complemental strand, 12102637 - 12102586
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    ||||||||||||| || ||||||||||||||||| | ||| ||||||||||||    
T  12102637 tgttgtgaattcgtacccaaaactcacaccaata-atactttgatgtgtggag 12102586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 456
Target Start/End: Original strand, 18441441 - 18441512
Alignment:
Q  385 tgttgtgaattcgga-cacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataacca 456  Q
    |||||||||||| || | |||||| |||||||||||||| || ||||||||||| |||| |||||| ||||||    
T  18441441 tgttgtgaattccgatctcaaaac-cacaccaatacaaagtaagatgtgtggagcaaaggaaagtagtaacca 18441512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 466
Target Start/End: Complemental strand, 26178257 - 26178174
Alignment:
Q  383 attgttgtgaattcgga-cacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||| || | |||||| ||||||||||| || || ||||||||||| |||| |||||| |||||| || ||||||    
T  26178257 attgttgtgaattccgatctcaaaac-cacaccaatacgaagtaagatgtgtggagcaaaggaaagtagtaaccactaacaaagt 26178174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 6e-29; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 15213155 - 15213074
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  15213155 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 15213074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 6599339 - 6599253
Alignment:
Q  379 gataattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| |||| |||||| ||||||||||||||||    
T  6599339 gataattgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtagagcaaaggaaagtagtaaccaatatcaaagt 6599253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 6674792 - 6674706
Alignment:
Q  379 gataattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| |||| |||||| ||||||||||||||||    
T  6674792 gataattgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtagagcaaaggaaagtagtaaccaatatcaaagt 6674706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 41366415 - 41366498
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  41366415 aattattgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 41366498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 12702430 - 12702511
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  12702430 ttgttgtgaattcggactcaaaa-tcacatcaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 12702511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 30143708 - 30143628
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| ||| ||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  30143708 tgttgtgaattcagactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 30143628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 385 - 465
Target Start/End: Complemental strand, 5689635 - 5689556
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaag 465  Q
    |||||||||||| ||| ||||| |||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  5689635 tgttgtgaattccgactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaag 5689556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 389 - 464
Target Start/End: Original strand, 3303474 - 3303549
Alignment:
Q  389 gtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaa 464  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||| |||| |||||  ||||||||||||||    
T  3303474 gtgaattcggactcaaatctcacaccaatacaaactatgatgtgtggagcaaaggaaagtggtaaccaatatcaaa 3303549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 4743027 - 4743108
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| |||| |||||||||||||||||||| |||||||||| |||| |||||  ||||||||| ||||||    
T  4743027 tgttgtgaattcggactcaaatctcacaccaatacaaactataatgtgtggagcaaaggaaagtggtaaccaataccaaagt 4743108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 43036799 - 43036710
Alignment:
Q  377 atgataattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||| ||||||| |||||| |||| |||||||||||||||||||||  ||||||||||||| |||| |||||| |||||||| |||||||    
T  43036799 atgaaaattgttatgaatttggactcaaaactcacaccaatacaaaaaatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagt 43036710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 382 - 466
Target Start/End: Complemental strand, 4732029 - 4731946
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| || ||||| |||||||||||||||| ||||||||||||| |||| |||||| ||||| ||||||||||    
T  4732029 aattgttgtgaattcgaactcaaaa-tcacaccaatacaaacaatgatgtgtggagcaaaggaaagtagtaaccgatatcaaagt 4731946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 19491501 - 19491583
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||| ||||||||  ||||||| |||||||||||||||||| |||| |||||| ||| ||||||||||||    
T  19491501 attgttgtgaattcggactcaaaactctaaccaata-aaactatgatgtgtggagcaaaggaaagtattaatcaatatcaaagt 19491583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 33352518 - 33352438
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||| || ||||| ||||||||||| ||| |||||| ||||||| |||| |||||||||||||||||||||||    
T  33352518 tgttgtgaattcgtactcaaaa-tcacaccaatataaattatgatatgtggagcaaaggaaagtaataaccaatatcaaagt 33352438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 466
Target Start/End: Original strand, 34254154 - 34254211
Alignment:
Q  409 cacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  34254154 cacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 34254211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 466
Target Start/End: Original strand, 34256330 - 34256387
Alignment:
Q  409 cacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||||    
T  34256330 cacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatattaaagt 34256387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 18105873 - 18105956
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||| ||||||| ||| ||||| |||||| ||||||||||||||||||| ||| |||| |||||| |||||||||| |||||    
T  18105873 aattgttatgaattcagactcaaaa-tcacactaatacaaactatgatgtgtagagcaaaggaaagtagtaaccaatattaaagt 18105956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 19945156 - 19945239
Alignment:
Q  383 attgttgtgaattc-ggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||| || | ||||| ||||||||||||||||| |||||||||||| |||| |||||| ||||||||| ||||||    
T  19945156 attgttgtgaattccggtctcaaaa-tcacaccaatacaaactttgatgtgtggagcaaaggaaagtagtaaccaataacaaagt 19945239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 1746017 - 1746099
Alignment:
Q  384 ttgttgtgaatt-cggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| ||| | ||||| |||||||||||| ||||||||||||||||| |||| |||||| ||||||||| ||||||    
T  1746017 ttgttgtgaatttcggtctcaaaa-tcacaccaatacgaactatgatgtgtggagtaaaggaaagtagtaaccaataacaaagt 1746099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 17982999 - 17982941
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||||||||||||||| |||| || ||| ||||||||| ||||||    
T  17982999 tcacaccaatacaaactatgatgtgtggagcaaaggaacgtagtaaccaataacaaagt 17982941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 38657699 - 38657653
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||    
T  38657699 atttgaattgttattgaaaaatactttttgaatctagttgagaataa 38657653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 42498541 - 42498483
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||| |||||||||||||| |||| ||||||  |||||||||||||||    
T  42498541 tcacaccaatacaaaatatgatgtgtggagcaaaggaaagtagcaaccaatatcaaagt 42498483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 44304201 - 44304143
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||| |||||||||||||||| |||| |||||| |||||||||| |||||    
T  44304201 tcacaccaatacatactatgatgtgtggagcaaaggaaagtagtaaccaatattaaagt 44304143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 1345176 - 1345256
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||  ||||| |||||| ||||||||| || || ||||||| |||| |||||| ||||||||||||||||    
T  1345176 tgttgtgaattcggattcaaaa-tcacacaaatacaaacaataatctgtggagcaaaggaaagtagtaaccaatatcaaagt 1345256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 10015443 - 10015362
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||   |||||| ||||||||  |||| | ||||||||||| | || |||||||||||||||||||||||    
T  10015443 tgttgtgaattcggatttaaaacttacaccaatgaaaacaaagatgtgtggagcagaggaaagtaataaccaatatcaaagt 10015362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 27811626 - 27811566
Alignment:
Q  408 tcacaccaatacaaactat--gatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||||  ||||||||||| |||| |||||| ||||||||||||||||    
T  27811626 tcacaccaatacaaactatatgatgtgtggaggaaaggaaagtagtaaccaatatcaaagt 27811566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 464
Target Start/End: Complemental strand, 4734075 - 4733996
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaacta-tgatgtgtggagaaaagaaaagtaataaccaatatcaaa 464  Q
    |||||||||||||||  ||||| | |||||||||||||| | |||||||||||| |||| |||||| ||||||||||||||    
T  4734075 tgttgtgaattcggattcaaaatt-acaccaatacaaaccaatgatgtgtggagcaaaggaaagtagtaaccaatatcaaa 4733996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 465
Target Start/End: Original strand, 3050924 - 3051003
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaag 465  Q
    |||||||||||| |||| |||| |||||||||||| | |  ||||||||||||| ||||||||||| ||||||  |||||||    
T  3050924 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaag 3051003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 31218603 - 31218545
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||| |||||||||||||||||| |||| ||||||  |||||||| ||||||    
T  31218603 tcacaccaatataaactatgatgtgtggagcaaaggaaagtagcaaccaataacaaagt 31218545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 8154147 - 8154068
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||| | ||||| |||||| |||| ||||||||||||||| || |||| |||||| ||| ||||||||||||    
T  8154147 tgttgtgaattcgggctcaaaa-tcacactaata-aaactatgatgtgtgaagtaaaggaaagtagtaatcaatatcaaagt 8154068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 9906674 - 9906715
Alignment:
Q  81 tttgaattgttattgaaaaatactttttgaatctaggttaga 122  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  9906674 tttgaattgttattgaaaaataccttttgagtctaggttaga 9906715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 40321442 - 40321363
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| ||| ||||| |||||| ||||||||||||||| ||||||| |||| ||||||  || ||||||||||||    
T  40321442 tgttgtgaattccgactcaaaa-tcacac-aatacaaactatgatatgtggagcaaaggaaagtagcaatcaatatcaaagt 40321363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 5063770 - 5063816
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    ||||||||||||||||||| |||| |||||||||||| | |||||||    
T  5063770 atttgaattgttattgaaagataccttttgaatctagttgagaataa 5063816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 466
Target Start/End: Complemental strand, 2628084 - 2628027
Alignment:
Q  409 cacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||| || ||||||||||| |||| |||||| |||||| || ||||||    
T  2628084 cacaccaatacaaagtaagatgtgtggagcaaaggaaagtagtaaccactaacaaagt 2628027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 3231644 - 3231726
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggag-aaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||| | || |||||||||||  |||||  ||||||||||| ||||  |||||| |||| |||||||||||    
T  3231644 attgttgtgaattcggactctaatctcacaccaat--aaacttggatgtgtggagtaaaatgaaagtagtaactaatatcaaagt 3231726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 8965492 - 8965570
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||| || ||||| ||||||||||| ||||||||||| |||||| || |||  ||| ||||||||||||||||    
T  8965492 tgttgtgaattcgaactcaaaa-tcacaccaata-aaactatgatgcgtggagcaaggaac-gtagtaaccaatatcaaagt 8965570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 2268119 - 2268162
Alignment:
Q  81 tttgaattgttattgaaaaatactttttgaatctaggttagaata 125  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||    
T  2268119 tttgaattgttattgaaaaatac-ctttgaatctagtttagaata 2268162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 466
Target Start/End: Original strand, 3073686 - 3073758
Alignment:
Q  391 gaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||| |||||  ||||||||||  |||||| || ||||||| |||| ||||||||||||| |||||||||    
T  3073686 gaattcggactcaaaaa-cacaccaata--aactatcatatgtggagcaaaggaaagtaataaccagtatcaaagt 3073758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 442
Target Start/End: Complemental strand, 7493353 - 7493299
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaag 442  Q
    |||||||||||||||||| ||   ||||||||||| |||||||||||||||||| ||||    
T  7493353 ttgttgtgaattcggacaaaa---tcacaccaata-aaactatgatgtgtggagcaaag 7493299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 9e-28; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 43102609 - 43102477
Alignment:
Q  19 tgattctagttattcatgatatttgatgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaatctaggt 118  Q
    |||||||| |||||||||||||| ||||||||||||| ||  |||||||| ||| ||||| ||||||||||| |||||||||||| ||||||||||||||    
T  43102609 tgattcta-ttattcatgatatt-gatgttattcttgcttcatatgcttt-gatcttatagatttgaattgtaattgaaaaataccttttgaatctaggt 43102513  T
Q  119 tagaataacatctattaaactctaaatactagaaat 154  Q
    ||||||||  |||||| || ||||||| ||||||||    
T  43102512 tagaataatgtctattgaattctaaattctagaaat 43102477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 381 - 466
Target Start/End: Original strand, 37559660 - 37559745
Alignment:
Q  381 taattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||| |||| |||||| ||||||||||||||||    
T  37559660 taattgttgtgaattcggactcaaaactcacaccaatataaactatgatgtctggagcaaaggaaagtagtaaccaatatcaaagt 37559745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 28223218 - 28223302
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||  |||||| ||||||||||||||||    
T  28223218 aattgttgtgaattcggactcaaaactcagaccaatacaaactatgatgtgtggagcaaacgaaagtagtaaccaatatcaaagt 28223302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 31659610 - 31659528
Alignment:
Q  381 taattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaa 464  Q
    |||||||||||||||||||| ||||| ||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||    
T  31659610 taattgttgtgaattcggactcaaaa-tcacaccaatataaaatatgatgtgtggagaaaagaaaagtagtaaccaatatcaaa 31659528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 8550583 - 8550664
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  8550583 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 8550664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 28220025 - 28220107
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||| || |||||||||| |||||    
T  28220025 ttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggaacaaagaaaattagtaaccaatattaaagt 28220107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 833970 - 834050
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  833970 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 834050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 466
Target Start/End: Complemental strand, 44455529 - 44455448
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||| || ||||| |||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  44455529 ttgttgtgaattcgtactcaaaa-tcacaccaatacaaactatgatatgtggagaaaagaaaagtggtaaccaatatcaaagt 44455448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 13137780 - 13137861
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||||||||| |||| |||||| |||||||| |||||||    
T  13137780 tgttgtaaattcggactcaaaactcacaccaatacaaattatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagt 13137861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 30476247 - 30476327
Alignment:
Q  386 gttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| || ||||||||||||||||||||||||| |||||||||| |||| |||||| |||||||| |||||||    
T  30476247 gttgtgaattcgaactcaaaactcacaccaatacaaactataatgtgtggagtaaaggaaagtagtaaccaatttcaaagt 30476327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 385 - 465
Target Start/End: Original strand, 45644158 - 45644237
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaag 465  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  45644158 tgttgtgaattcggactcaaaa-tcacacaaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaag 45644237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 3846919 - 3847001
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||| ||||| ||| || ||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  3846919 attgttgtgaattcggactcaaaa-tcatactaatacaaactatgatgtgtggagtaaaggaaagtagtaaccaatatcaaagt 3847001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 40122000 - 40122081
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||| |||||| ||||||||||| ||||    
T  40122000 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgcgtggagcaaaggaaagtagtaaccaatatctaagt 40122081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 384 - 466
Target Start/End: Complemental strand, 49918719 - 49918638
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||| ||||| ||| ||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  49918719 ttgttgtaaattcagactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 49918638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 378 - 466
Target Start/End: Complemental strand, 20763044 - 20762956
Alignment:
Q  378 tgataattgttgtgaattc-ggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||| |||||||||||||| || | ||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  20763044 tgattattgttgtgaattccggtctcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtattaaccaatatcaaagt 20762956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 382 - 466
Target Start/End: Complemental strand, 10925593 - 10925510
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||| |||| |||||| ||| ||||||||||||    
T  10925593 aattgttgtgaattcggactcaaaa-tcacaacaatacaaactatgttgtgtggagcaaaggaaagtagtaatcaatatcaaagt 10925510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 383 - 466
Target Start/End: Complemental strand, 41361280 - 41361198
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||| ||||||||  ||||||| |||||||||||||||||| |||| |||||| ||| ||||||||||||    
T  41361280 attgttgtgaattcggactcaaaactctaaccaata-aaactatgatgtgtggagcaaaggaaagtattaatcaatatcaaagt 41361198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 50166979 - 50167060
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||| ||| || ||||| ||||||||| |||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  50166979 ttgttgtgaactcgaactcaaaa-tcacaccaaaacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 50167060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 466
Target Start/End: Complemental strand, 3189708 - 3189632
Alignment:
Q  389 gtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||| |||| |||||| |||||||| |||||||    
T  3189708 gtgaattcggacacaaaa-tcacaccaatataaactatgatgtctggagcaaaggaaagtagtaaccaatttcaaagt 3189632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 466
Target Start/End: Complemental strand, 3198525 - 3198449
Alignment:
Q  389 gtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||| |||| |||||| |||||||| |||||||    
T  3198525 gtgaattcggacacaaaa-tcacaccaatataaactatgatgtctggagcaaaggaaagtagtaaccaatttcaaagt 3198449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 466
Target Start/End: Complemental strand, 3207364 - 3207288
Alignment:
Q  389 gtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||| |||| |||||| |||||||| |||||||    
T  3207364 gtgaattcggacacaaaa-tcacaccaatataaactatgatgtctggagcaaaggaaagtagtaaccaatttcaaagt 3207288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 28265359 - 28265439
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  28265359 tgttgggaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagtaaaggaaaatagtagccaatatcaaagt 28265439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 385 - 449
Target Start/End: Original strand, 37503362 - 37503425
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagta 449  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| ||||||    
T  37503362 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagtaaaggaaagta 37503425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 4552446 - 4552529
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||| |||||||||| ||||  ||||||||||||||||||||||| ||| || |||| |||||| |||||||| |||||||    
T  4552446 attgttgcgaattcggactcaaatttcacaccaatacaaactatgatgcgtgaagtaaaggaaagtagtaaccaatttcaaagt 4552529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 387 - 466
Target Start/End: Original strand, 13659153 - 13659231
Alignment:
Q  387 ttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||| ||||| ||||| ||||||||||||| |||||||||| |||| |||||| ||||||| ||||||||    
T  13659153 ttgtgaattcggactcaaaa-tcacatcaatacaaactataatgtgtggagcaaaggaaagtagtaaccaacatcaaagt 13659231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 23555069 - 23555151
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||| ||||| || |||||||| |||| ||||||||||||| ||||||||||| ||| |||| |||||||    
T  23555069 attgttgtgaattcggactcaaaa-tcgcaccaatagaaacaatgatgtgtggagcaaagaaaagtagtaatcaatgtcaaagt 23555151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 27048590 - 27048531
Alignment:
Q  67 tttgattttataaatttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||||| ||||  |||||||||||||||||||||||| ||||||||||||||||||||||    
T  27048590 tttgatcttatggatttgaattgttattgaaaaataccttttgaatctaggttagaataa 27048531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 196710 - 196790
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||| || ||||  ||||||||||||||| |||||||||||||| |||| ||| || ||||||||||||||||    
T  196710 tgttgtgaattcgtactcaaat-tcacaccaatacaaattatgatgtgtggagcaaaggaaaatagtaaccaatatcaaagt 196790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 1833876 - 1833796
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| ||| | |||||||||||||||||||||| ||||||| |||| |||||  |||||||| |||||||    
T  1833876 tgttgtgaattcggactcaata-tcacaccaatacaaactatgatctgtggagtaaaggaaagtcgtaaccaatttcaaagt 1833796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 414 - 466
Target Start/End: Complemental strand, 3157205 - 3157153
Alignment:
Q  414 caatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  3157205 caatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 3157153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 47294476 - 47294429
Alignment:
Q  79 aatttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  47294476 aatttgaattgttattgaaaaatactttttgaatctagttgagaataa 47294429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 50169037 - 50169095
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||||||||||| || |||  |||||| ||||||||||||||||    
T  50169037 tcacaccaatacaaactatgatgtgtgaagcaaatgaaagtagtaaccaatatcaaagt 50169095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 21815273 - 21815228
Alignment:
Q  81 tttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||    
T  21815273 tttgaaatgttattgaaaaataccttttgaatctaggttagaataa 21815228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 927785 - 927863
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| ||||| ||||| |||||  ||||||||||||||||| ||||  ||||  ||||||||||||||||    
T  927785 tgttgtgaattcggactcaaaa-tcacatcaata--aactatgatgtgtggagtaaagggaagtggtaaccaatatcaaagt 927863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 9316416 - 9316370
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||||    
T  9316416 atttgaattgttattaaaaaataccttttgaatctagtttagaataa 9316370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 19753035 - 19752985
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtg 432  Q
    ||||||||||||||| ||| ||||  |||||||||||||||||||||||||    
T  19753035 aattgttgtgaattcagactcaaatttcacaccaatacaaactatgatgtg 19752985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 456
Target Start/End: Complemental strand, 51765773 - 51765697
Alignment:
Q  378 tgataattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataacca 456  Q
    |||| |||||||||||||| |  ||||||| ||||||||||| || |||||||||||||| |||| |||||| ||||||    
T  51765773 tgattattgttgtgaattccgt-acaaaac-cacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaacca 51765697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 466
Target Start/End: Complemental strand, 15820659 - 15820584
Alignment:
Q  387 ttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||| ||||||||||  |||||  ||||  ||||||||||| |||| |||||| |||| |||||||||||    
T  15820659 ttgtgaattcggactcaaaactcac--caata--aacttagatgtgtggagcaaaggaaagtagtaactaatatcaaagt 15820584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 342
Target Start/End: Complemental strand, 30660006 - 30659938
Alignment:
Q  273 tctaatccaaacagttttacttctctgtctaatctcgttttatttaccgcattatagttcaaatagtttt 342  Q
    |||||||| |||||||||||  || | || ||||||  ||||||||||||||| ||||||||||||||||    
T  30660006 tctaatcctaacagttttacgcct-tatcaaatctctgtttatttaccgcattctagttcaaatagtttt 30659938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 466
Target Start/End: Complemental strand, 16455987 - 16455904
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||| ||||| | ||||||||  |||| | ||| |||| || |||  |||||| ||||||||||||||||    
T  16455987 aattgttgtgaattcggactcaaaa-ttacaccaatgaaaacaaagatttgtgtagcaaatgaaagtagtaaccaatatcaaagt 16455904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 440
Target Start/End: Original strand, 42297791 - 42297823
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaa 440  Q
    |||||||||| ||||||||||||||||||||||    
T  42297791 tcacaccaatccaaactatgatgtgtggagaaa 42297823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 26175436 - 26175517
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||| |||||||    
T  26175436 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagt 26175517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 12743725 - 12743809
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||| |||||||    
T  12743725 aattgttgtgaattcggactcaaaactcacaccaatacaaactatgttgtgtggagcaaaggaaagtagtaaccaatttcaaagt 12743809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 80 - 221
Target Start/End: Complemental strand, 28589184 - 28589044
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggtt-agaataa-catctattaaactctaaatactagaaatggttttagcttttgataatcaca 177  Q
    |||||||||||||||||||| ||||||||||||| || || || |||| | |||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  28589184 atttgaattgttattgaaaagtactttttgaatcaagatttaggataaacttctattaaaccctaaatactagaaatggttttaggttttgataaccaca 28589085  T
Q  178 gcgttatgtatcaaatattaatgctattgtattgtttaataggc 221  Q
     | |||  |||||| | |||||| ||||||||||||||||||||    
T  28589084 tc-tta--tatcaagtcttaatgttattgtattgtttaataggc 28589044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 12739351 - 12739434
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||  |||||| |||||||| |||||||    
T  12739351 attgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagtaaaagaaagtagtaaccaatttcaaagt 12739434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 36463196 - 36463276
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  36463196 tgttgtgaattcggactcaaaa-tcacactaatacaaactatgatgtgtggagtaaaggaaagtaataaccaatatcaaagt 36463276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 48893443 - 48893523
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  48893443 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 48893523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 46147192 - 46147276
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||| | | |||||||||||||||| ||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  46147192 aattgttgtgaattccgcctcaaaactcacaccaatgcaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 46147276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 387 - 466
Target Start/End: Original strand, 52467159 - 52467238
Alignment:
Q  387 ttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| || |||| |||||  ||||||||||||||||    
T  52467159 ttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtgaagcaaaggaaagtggtaaccaatatcaaagt 52467238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 387 - 466
Target Start/End: Original strand, 56178438 - 56178516
Alignment:
Q  387 ttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  56178438 ttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 56178516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 9927257 - 9927339
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||||||||||| |||| |||||| | ||||||||||||||    
T  9927257 ttgttgtgaattcggactcaaaactcgcaccaatataaactatgatgtgtggagcaaaggaaagtagttaccaatatcaaagt 9927339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 37740994 - 37740913
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||| | || |||||| ||| ||||||||||||    
T  37740994 tgttgtaaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcacaggaaagtagtaatcaatatcaaagt 37740913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 48143417 - 48143336
Alignment:
Q  385 tgttgtgaattc-ggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  48143417 tgttgtgaattccggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 48143336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 52082462 - 52082543
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||  |||| |||||| ||||||||||||||||    
T  52082462 ttgttgtgaattcggactcaaaa-tcacaccaatacaaattatgatgtgtggaacaaaggaaagtagtaaccaatatcaaagt 52082543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 6541987 - 6542067
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||| |||||||||| ||||| | ||| |||||||||||| |||| |||||||||||||||||||||||    
T  6541987 tgttgtgaattcggacataaaactcacatcaata-atactttgatgtgtggagcaaaggaaagtaataaccaatatcaaagt 6542067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 465
Target Start/End: Original strand, 45686986 - 45687066
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaag 465  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||||| ||||| |||| |||||| |||||||||||||||    
T  45686986 ttgttgtgaattcagactcaaaa-tcacaccaatacaaactatgatgtatggagcaaaggaaagtagtaaccaatatcaaag 45687066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 52095159 - 52095242
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||  |||| |||||| ||| ||||||||||||    
T  52095159 aattgttgtgaattcggactcaaaa-tcacaccaatacaaactatgacgtgtggaacaaaggaaagtagtaatcaatatcaaagt 52095242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 29999627 - 29999709
Alignment:
Q  384 ttgttgtgaattc-ggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||| || | ||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  29999627 ttgttgtgaattccggtctcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 29999709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 382 - 464
Target Start/End: Original strand, 34570211 - 34570292
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaa 464  Q
    |||||||| |||||||||  ||||| ||||||||||| |||||||||||||||||| |||| |||||| ||||||||||||||    
T  34570211 aattgttgcgaattcggattcaaaa-tcacaccaatataaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaa 34570292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 47038219 - 47038296
Alignment:
Q  388 tgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||| |||| ||||| |||||||||||||||||||||||||||||  |||| |||||| ||||||||||||||||    
T  47038219 tgtgaatttggactcaaaa-tcacaccaatacaaactatgatgtgtggaacaaaggaaagtagtaaccaatatcaaagt 47038296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 382 - 466
Target Start/End: Complemental strand, 5872186 - 5872105
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||  ||||||||||| |||| |||||| ||||||||||||||||    
T  5872186 aattgttgtgaatccggactcaaaa-tcacaccaatacaaact--gatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 5872105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 54199708 - 54199788
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||| ||||| |||| |||||| |||||| |||||||||    
T  54199708 tgttgtgaattcggactcaaaa-tcacaccaatacaaacgatgatgtatggagcaaaggaaagtagtaaccagtatcaaagt 54199788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 5369880 - 5369962
Alignment:
Q  384 ttgttgtgaattc-ggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||| || | ||||| |||||||||||||||||||||||||||||| |||| |||||| ||| ||||||||||||    
T  5369880 ttgttgtgaattccggtctcaaaa-tcacaccaatacaaactatgatgtgtggagtaaaggaaagtagtaatcaatatcaaagt 5369962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 432
Target Start/End: Complemental strand, 36994898 - 36994851
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtg 432  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  36994898 tgttgtgaattctgactcaaaactcacaccaatacaaactatgatgtg 36994851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 380 - 466
Target Start/End: Complemental strand, 29254866 - 29254781
Alignment:
Q  380 ataattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||| |||||||||||||||    ||| |||||| ||||||||||||||||||||||| |||| |||||| |||||||||| |||||    
T  29254866 ataagtgttgtgaattcggaacttaaaatcacactaatacaaactatgatgtgtggagcaaag-aaagtagtaaccaatattaaagt 29254781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 23543310 - 23543351
Alignment:
Q  81 tttgaattgttattgaaaaatactttttgaatctaggttaga 122  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  23543310 tttgaattgttattgaaaaataccttttgaatctaggttaga 23543351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 50262486 - 50262539
Alignment:
Q  384 ttgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    ||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||    
T  50262486 ttgttgtgaattcagactcaaatttcacaccaatacaaactatgatgtgtggag 50262539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 465
Target Start/End: Complemental strand, 4588323 - 4588240
Alignment:
Q  382 aattgttgtgaattcggacac-aaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaag 465  Q
    ||||||||||||||||||| | |||||||||||||||| | ||| |||||||||||| |||| ||| || |||||| ||||||||    
T  4588323 aattgttgtgaattcggactcaaaaactcacaccaata-atactttgatgtgtggagcaaaggaaaatagtaaccactatcaaag 4588240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 31474512 - 31474434
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| |||   |||||||||||||||| |||||||||| || |||  |||||| ||| ||||||||||||    
T  31474512 tgttgtgaattcggactcaa---tcacaccaatacaaacaatgatgtgtgtagcaaatgaaagtagtaatcaatatcaaagt 31474434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 13992113 - 13992171
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| || |||||||||||||| |||| |||||| ||||||||| ||||||    
T  13992113 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccaataacaaagt 13992171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 13568433 - 13568388
Alignment:
Q  81 tttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||    
T  13568433 tttgaaatgttattgaaaaataccttttgattctaggttagaataa 13568388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 383
Target Start/End: Complemental strand, 28588919 - 28588782
Alignment:
Q  247 atatatgtgacgtttgatcaataaagtctaatccaaacagttttacttctctgtctaa-tctcgttttatttaccgcattatagttcaaatag--ttttc 343  Q
    |||||||||||||||| | | | ||||||||||| | ||||||||  ||||||| ||| ||| | |||||||||||||||||||| | | |||  |||||    
T  28588919 atatatgtgacgtttggttagtgaagtctaatcccagcagttttaagtctctgtttaactctag-tttatttaccgcattatagtccgattaggtttttc 28588821  T
Q  344 ataacaaataattttataaacccttaacttagaatgataa 383  Q
      |||||| ||||||| |||||| |||||||||| |||||    
T  28588820 gaaacaaacaattttaaaaaccc-taacttagaacgataa 28588782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 437
Target Start/End: Complemental strand, 41639801 - 41639749
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    |||||||||||| ||| ||||  ||||| ||||||||||||||||||||||||    
T  41639801 tgttgtgaattcagactcaaatttcacatcaatacaaactatgatgtgtggag 41639749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 460
Target Start/End: Complemental strand, 5350271 - 5350195
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatat 460  Q
    ||||||||||||||||||| |||| |||||||||||  |||||  | |||||| || |||| |||||| ||||||||||    
T  5350271 aattgttgtgaattcggactcaaatctcacaccaat--aaacttaggtgtgtgaagtaaaggaaagtagtaaccaatat 5350195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 37229523 - 37229608
Alignment:
Q  379 gataattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||| |||||||||||||| ||||| | | ||||||| |||||||| ||||||||| || |  ||||| ||||||||||||||||    
T  37229523 gataattattgtgaattcggactcaaaa-taaaaccaata-aaactatgttgtgtggagcaatgggaagtagtaaccaatatcaaagt 37229608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 466
Target Start/End: Original strand, 48142188 - 48142266
Alignment:
Q  387 ttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||| ||| | | || ||||||||||| |||||  ||||||||||| |||| ||||||||||||||||| |||||    
T  48142188 ttgtgaattaggataaataaatcacaccaata-aaacttagatgtgtggagcaaaggaaagtaataaccaatattaaagt 48142266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 437
Target Start/End: Complemental strand, 2210072 - 2210043
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggag 437  Q
    ||||||||||||||||||||||||||||||    
T  2210072 tcacaccaatacaaactatgatgtgtggag 2210043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1668 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1668
Description:

Target: scaffold1668; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 385 - 467
Target Start/End: Original strand, 1301 - 1383
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagtt 467  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| |||||| ||| |||||| ||||||    
T  1301 tgttgtgaattcgaacacaaaactcacaccaatacaatctatgatgtgtggagcaaaggaaagtagtaatcaatattaaagtt 1383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 5e-20; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 379 - 437
Target Start/End: Original strand, 602897 - 602955
Alignment:
Q  379 gataattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  602897 gatacttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggag 602955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 26954091 - 26954171
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||  |||||| |||||||| |||||||    
T  26954091 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaagaaagtagtaaccaatttcaaagt 26954171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 28137211 - 28137291
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||| | ||||| ||||||||||||||||||||| |||||||| |||| |||||| ||||||||||||||||    
T  28137211 tgttgtgaattcggtctcaaaa-tcacaccaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaatatcaaagt 28137291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 387 - 465
Target Start/End: Original strand, 3038729 - 3038806
Alignment:
Q  387 ttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaag 465  Q
    ||||||||||| || ||||| ||| |||||||||||||||||||||| ||| |||| ||||||||||||||||||||||    
T  3038729 ttgtgaattcgaactcaaaa-tcagaccaatacaaactatgatgtgtcgagcaaaggaaagtaataaccaatatcaaag 3038806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 5406025 - 5406083
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||    
T  5406025 tcacaccaatacaaactatgatgtgtggagtaaagaaaagtagtaaccaatattaaagt 5406083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 5408892 - 5408950
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  5408892 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 5408950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 5410350 - 5410408
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||    
T  5410350 tcacaccaatacaaactatgatgtgtggagtaaagaaaagtagtaaccaatattaaagt 5410408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 5413217 - 5413275
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  5413217 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 5413275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 449
Target Start/End: Original strand, 14521476 - 14521541
Alignment:
Q  383 attgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagta 449  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||||||||| |||||||||||    
T  14521476 attgttgtgaattcggactcaaaactcacaccaat-gaaactatgatgtgtggagcaaagaaaagta 14521541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 466
Target Start/End: Original strand, 9182857 - 9182911
Alignment:
Q  412 accaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  9182857 accaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 9182911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 219
Target Start/End: Original strand, 14759366 - 14759504
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggt-tagaataa-catctattaaactctaaatactagaaatggttttagcttttgataatcaca 177  Q
    |||||| |||||||| |||| ||||||||||||| || | ||| |||| |||||||||||| ||||||||||||||||| ||||| |||| |||  ||||    
T  14759366 atttgatttgttattcaaaactactttttgaatcaagatataggataaacatctattaaaccctaaatactagaaatggatttaggtttttatatccaca 14759465  T
Q  178 gcgttatgtatcaaatattaatgctattgtattgtttaatag 219  Q
     |  || ||||||| | |||||||||||| ||||||||||||    
T  14759466 tc--ta-gtatcaagtcttaatgctattgcattgtttaatag 14759504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 220
Target Start/End: Original strand, 20382975 - 20383114
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggttagaataacat--ctattaaactctaaatactagaaatggttttagcttttgataatcaca 177  Q
    |||||| ||||||||||||||||||||||||||  |  |  ||  |||||  ||||||||| ||||||||||||||||| ||||| ||||||||| ||      
T  20382975 atttgatttgttattgaaaaatactttttgaatagaaataggataaacatatctattaaaccctaaatactagaaatggatttaggttttgataacca-- 20383072  T
Q  178 gcgttatgtatcaaatattaatgctattgtattgtttaatagg 220  Q
     | | | ||||||| | ||||||||||||| ||||||||||||    
T  20383073 -cttcaagtatcaagtcttaatgctattgtgttgtttaatagg 20383114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 33160147 - 33160231
Alignment:
Q  382 aattgttgtgaattc-ggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||| ||||| |||| ||| |||||||||||||||||||||||||| |||| ||| || |||||||| |||||||    
T  33160147 aattgttgtgaattccggacataaaa-tcataccaatacaaactatgatgtgtggagcaaaggaaaatagtaaccaatttcaaagt 33160231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 13105590 - 13105530
Alignment:
Q  94 tgaaaaatactttttgaatctaggttagaataacatctattaaactctaaatactagaaat 154  Q
    |||||||||| ||||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  13105590 tgaaaaataccttttgaatctaggttagaataatgtctattgaactctaaattctagaaat 13105530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 16452125 - 16452208
Alignment:
Q  383 attgttgtgaattcgga-cacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||| || | ||||| |||||||||||| ||||||||||||||||| |||| |||||| ||||||||| ||||||    
T  16452125 attgttgtgaattccgatctcaaaa-tcacaccaatacgaactatgatgtgtggagtaaaggaaagtagtaaccaataacaaagt 16452208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 7826485 - 7826403
Alignment:
Q  41 ttgatgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||| ||||||||||||||| ||   |||||| ||||  |||||||| || |||||||||||| ||||||||||||||||||||||    
T  7826485 ttgaggttattcttgttttccat---tttgatcttatggatttgaatcgtgattgaaaaataccttttgaatctaggttagaataa 7826403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 10800301 - 10800383
Alignment:
Q  41 ttgatgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||| ||||||||||||||| ||   |||||| ||||  |||||||| || |||||||||||| ||||||||||||||||||||||    
T  10800301 ttgaggttattcttgttttccat---tttgatcttatggatttgaatcgtgattgaaaaataccttttgaatctaggttagaataa 10800383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 10807012 - 10807094
Alignment:
Q  41 ttgatgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||| ||||||||||||||| ||   |||||| ||||  |||||||| || |||||||||||| ||||||||||||||||||||||    
T  10807012 ttgaggttattcttgttttccat---tttgatcttatggatttgaatcgtgattgaaaaataccttttgaatctaggttagaataa 10807094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 14118288 - 14118370
Alignment:
Q  41 ttgatgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||| ||||||||||||||| ||   |||||| ||||  |||||||| || |||||||||||| ||||||||||||||||||||||    
T  14118288 ttgaggttattcttgttttccat---tttgatcttatggatttgaatcgtgattgaaaaataccttttgaatctaggttagaataa 14118370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 14122246 - 14122328
Alignment:
Q  41 ttgatgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||| ||||||||||||||| ||   |||||| ||||  |||||||| || |||||||||||| ||||||||||||||||||||||    
T  14122246 ttgaggttattcttgttttccat---tttgatcttatggatttgaatcgtgattgaaaaataccttttgaatctaggttagaataa 14122328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 24908918 - 24908836
Alignment:
Q  41 ttgatgttattcttgttttctatgcttttgattttataaatttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||| ||||||||||||||| ||   |||||| ||||  |||||||| || |||||||||||| ||||||||||||||||||||||    
T  24908918 ttgaggttattcttgttttccat---tttgatcttatggatttgaatcgtgattgaaaaataccttttgaatctaggttagaataa 24908836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 437
Target Start/End: Complemental strand, 17758405 - 17758349
Alignment:
Q  382 aattgttgtgaattcgg-acacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    ||||||||||||||||| || ||||  ||||||||||||||||||||||||||||||    
T  17758405 aattgttgtgaattcgggactcaaatttcacaccaatacaaactatgatgtgtggag 17758349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 16569389 - 16569307
Alignment:
Q  385 tgttgtgaattcggacacaaaactcacaccaata-caaactatgatgtgtggag-aaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||||| ||||| |||||||||||   ||||||||||||||||| ||||| |||||| ||||||| ||||||||    
T  16569389 tgttgtgaattcggactcaaaa-tcacaccaatattcaactatgatgtgtggagcaaaaggaaagtagtaaccaaaatcaaagt 16569307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 1051675 - 1051629
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    ||||||||||||||||||||||| ||||||||||||| | |||||||    
T  1051675 atttgaattgttattgaaaaatattttttgaatctagttgagaataa 1051629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 2171349 - 2171407
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| ||||||||||||||||| |||| |||||| |||||| || ||||||    
T  2171349 tcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaaccactaacaaagt 2171407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 31404474 - 31404555
Alignment:
Q  385 tgttgtgaatt-cggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||| |||||| |||| |||| ||||||| ||||||||||||||||| |||| ||| || ||| ||||||||||||    
T  31404474 tgttgtgaatttcggacaaaaaa-tcactccaatacgaactatgatgtgtggagcaaaggaaaatagtaatcaatatcaaagt 31404555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 3808510 - 3808547
Alignment:
Q  400 cacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    |||||||||||||||||||||||||||||| |||||||    
T  3808510 cacaaaactcacaccaatacaaactatgatatgtggag 3808547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 18766143 - 18766098
Alignment:
Q  81 tttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||||| |||||||||||||||| |||||||||| |||||||||||    
T  18766143 tttgaaatgttattgaaaaataccttttgaatcttggttagaataa 18766098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 3072579 - 3072637
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| || |||||||||||||| |||| |||||| |||||| || ||||||    
T  3072579 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccactaacaaagt 3072637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 21589309 - 21589255
Alignment:
Q  384 ttgttgtgaattc-ggacacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    ||||||||||||| |||| ||||  ||||||||||| ||||||||||||||||||    
T  21589309 ttgttgtgaattctggactcaaatttcacaccaatataaactatgatgtgtggag 21589255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 30834356 - 30834414
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| || |||||||||||||| |||| ||| || ||||||||| ||||||    
T  30834356 tcacaccaatacgaaatatgatgtgtggagcaaaggaaaatagtaaccaataacaaagt 30834414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 437
Target Start/End: Complemental strand, 5043982 - 5043953
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggag 437  Q
    ||||||||||||||||||||||||||||||    
T  5043982 tcacaccaatacaaactatgatgtgtggag 5043953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 437
Target Start/End: Complemental strand, 17763369 - 17763316
Alignment:
Q  385 tgttgtgaattcgg-acacaaaactcacaccaatacaaactatgatgtgtggag 437  Q
    |||||||||||||| || ||||  ||||||||||| ||||||||||||||||||    
T  17763369 tgttgtgaattcgggactcaaatttcacaccaatataaactatgatgtgtggag 17763316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 437
Target Start/End: Original strand, 22963531 - 22963560
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggag 437  Q
    ||||||||||||||||||||||||||||||    
T  22963531 tcacaccaatacaaactatgatgtgtggag 22963560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 437
Target Start/End: Complemental strand, 23824862 - 23824833
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggag 437  Q
    ||||||||||||||||||||||||||||||    
T  23824862 tcacaccaatacaaactatgatgtgtggag 23824833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 377 - 466
Target Start/End: Original strand, 20208 - 20295
Alignment:
Q  377 atgataattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||| ||||||||||||||||| |||  |||| |||||||||||||||||||||||||| |||| || ||| |||||||| |||||||    
T  20208 atgatacttgttgtgaattcggactcaa--ctcataccaatacaaactatgatgtgtggagcaaaggaaggtagtaaccaatgtcaaagt 20295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 382 - 466
Target Start/End: Complemental strand, 114974 - 114891
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaa-ctatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||| |  |||||| ||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||    
T  114974 aattgttgtgaattccgg-acaaaa-tcacaccaatacaaaactatgatgtgtggagcaaaggaaagtaataaccaatatcaaagt 114891  T

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Target: scaffold0006 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 387 - 466
Target Start/End: Original strand, 148914 - 148992
Alignment:
Q  387 ttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||||| ||||| ||||| ||||||||||||| |||||||||| |||| |||||| ||||||| ||||||||    
T  148914 ttgtgaattcggactcaaaa-tcacatcaatacaaactataatgtgtggagcaaaggaaagtagtaaccaacatcaaagt 148992  T

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Target: scaffold0265 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 17536 - 17581
Alignment:
Q  81 tttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||    
T  17536 tttgaaatgttattgaaaaataccttttgaatctaggttagaataa 17581  T

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Target: scaffold0286 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 11912 - 11854
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| ||||||||||||||||| |||| |||||| |||||| || ||||||    
T  11912 tcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaaccactaacaaagt 11854  T

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Target: scaffold0045 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 8888 - 8934
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||||||||| ||||| |||||| |||||||||||||||||||||||    
T  8888 atttgaattgctattgtaaaatattttttgaatctaggttagaataa 8934  T

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Target: scaffold0045; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 2506 - 2552
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||||||||| ||||| ||||||  ||||||||||||||||||||||    
T  2506 atttgaattgctattggaaaatatcttttgaatctaggttagaataa 2552  T

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Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 202856 - 202810
Alignment:
Q  80 atttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||||||||||||||||||||||| |||||||||||| | |||||||    
T  202856 atttgaattgttattgaaaaataccttttgaatctagttgagaataa 202810  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 434880 - 434822
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    |||||||||||| ||||||||||||||||| |||| |||||| |||||| ||| |||||    
T  434880 tcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaaccattattaaagt 434822  T

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Target: scaffold0291 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 1475 - 1520
Alignment:
Q  81 tttgaattgttattgaaaaatactttttgaatctaggttagaataa 126  Q
    |||||| |||||||||||||||| ||||||| ||||||||||||||    
T  1475 tttgaaatgttattgaaaaataccttttgaaactaggttagaataa 1520  T

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Target: scaffold0491 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 458
Target Start/End: Original strand, 10957 - 11031
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaat 458  Q
    ||||||||||||||| |  ||||||| |||||||||||||| |||||| ||||||| |||| |||||| ||||||||    
T  10957 aattgttgtgaattccgt-acaaaac-cacaccaatacaaagtatgatatgtggagcaaaggaaagtagtaaccaat 11031  T

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Target: scaffold0491; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 458
Target Start/End: Original strand, 8529 - 8605
Alignment:
Q  380 ataattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaat 458  Q
    ||||||||||||||||| |  ||||||| |||||||||||||| ||||||  |||||| |||| |||||| ||||||||    
T  8529 ataattgttgtgaattctgt-acaaaac-cacaccaatacaaagtatgatacgtggagcaaaggaaagtagtaaccaat 8605  T

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Target: scaffold0176 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 434
Target Start/End: Original strand, 17789 - 17843
Alignment:
Q  381 taattgttgtgaattc-ggacacaaaactcacaccaatacaaactatgatgtgtg 434  Q
    |||||||| ||||||| |||| ||||  |||||||||||||||||||||||||||    
T  17789 taattgttatgaattctggactcaaatttcacaccaatacaaactatgatgtgtg 17843  T

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Target: scaffold0466 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 437
Target Start/End: Complemental strand, 7678 - 7649
Alignment:
Q  408 tcacaccaatacaaactatgatgtgtggag 437  Q
    ||||||||||||||||||||||||||||||    
T  7678 tcacaccaatacaaactatgatgtgtggag 7649  T

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Target: scaffold0219 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 27247 - 27328
Alignment:
Q  382 aattgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagaaaagaaaagtaataaccaatatcaaagt 466  Q
    ||||||||||||||||||| |||| |||||| ||||  |||||  || |||||||||||||  ||||| |||||||||| |||||    
T  27247 aattgttgtgaattcggactcaaatctcacatcaat--aaacttagaagtgtggagaaaag-gaagtagtaaccaatatgaaagt 27328  T

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