View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14392_high_34 (Length: 385)
Name: NF14392_high_34
Description: NF14392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14392_high_34 |
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Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 334
Target Start/End: Complemental strand, 35480683 - 35480349
Alignment:
| Q |
1 |
atgctaatatgtcataacgcatgttatgtttgtccaattcatatttaatcaactcatgtttaagaaggatgtgagttcaaactcactatcgtgtgaggct |
100 |
Q |
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| T |
35480683 |
atgctaatatgtcataacgcatgttatgtttgtccaattcatatttaatcaactcatgtttaagaaggatgtgagttcaaactcgctatcgtgtgaggct |
35480584 |
T |
|
| Q |
101 |
tttgttgatcaataat-atataaattttgagatttttcttgacgtcaaagaactctcgtggtacaactcatctaaactttaatatataaataaatcataa |
199 |
Q |
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| T |
35480583 |
tttgttgatcaataattatataaattttgagacttttcttgacgtcaaagaactctcgtgctacaactcatctaaactttaatatataaataaatcataa |
35480484 |
T |
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| Q |
200 |
tatttaaactataatgtagcttagatttctaatctaatttagtttgagtttgtcaaagttttggtgcagctttgtgtcaaaagaggattgctatataaag |
299 |
Q |
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| T |
35480483 |
tatctaaaatataatgtagcttagatttctaatctaatttagtttgagtttgtcaaagttttggtgcagctttgtgtcaaaagaggattgctatataaag |
35480384 |
T |
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| Q |
300 |
cgaaagatttatccacgaaggcttcgcgaatgcaa |
334 |
Q |
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||||||||||||||| ||||||||||||||||||| |
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| T |
35480383 |
cgaaagatttatccatgaaggcttcgcgaatgcaa |
35480349 |
T |
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