View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14392_high_57 (Length: 263)
Name: NF14392_high_57
Description: NF14392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14392_high_57 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 13 - 263
Target Start/End: Original strand, 43482385 - 43482635
Alignment:
| Q |
13 |
actatttagttatgggacttatatggacaggacttagacataagtactcatttaaatgttaacggtttacaaaaatcatttatgatatgtatataaattt |
112 |
Q |
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| T |
43482385 |
actatttagttatgggacttatatggacaggacttagacataagtactcatttaaatgttaacggtttacaaaaatcatttatgatatgtatataaattt |
43482484 |
T |
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| Q |
113 |
ttgaggaatgttatgtatataaattgtttatgcaaagttttctcttagccaatgaatgaacatttaagtgtctgtttgaattgatggtgcaaatgataga |
212 |
Q |
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| T |
43482485 |
ttgaggaatgttatgtatataaattgtttatgcaaagttttctcttagccaatgaatgaacatttaagtgtctgtttgaattgatggtgcaaatgataga |
43482584 |
T |
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| Q |
213 |
attcttgcgaaccaccacaattttgacaaaattatactttagaacttcaac |
263 |
Q |
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| T |
43482585 |
attcttgtgaaccaccacgattttgacaaaattatactttagaacttcaac |
43482635 |
T |
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