View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14392_high_6 (Length: 655)

Name: NF14392_high_6
Description: NF14392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14392_high_6
NF14392_high_6
[»] chr8 (1 HSPs)
chr8 (5-638)||(41021955-41022588)


Alignment Details
Target: chr8 (Bit Score: 622; Significance: 0; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 622; E-Value: 0
Query Start/End: Original strand, 5 - 638
Target Start/End: Original strand, 41021955 - 41022588
Alignment:
Q  5 attttaaatagtttgtaaaatgaacaattgtttctaagtgatagtgagatgaatgttaaatgtagctagaaataaaacaagacattctatttctatcttc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41021955 attttaaatagtttgtaaaatgaacaattgtttctaagtgatagtgagatgaatgttaaatgtagctagaaataaaacaagacattctatttctatcttc 41022054  T
Q  105 catggaacctaagttcaatgcaatgtatcacttctatgatatattcatctcagacacgatttccaaaaccagtgtttccaaaacatttttctccacctcc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41022055 catggaacctaagttcaatgcaatgtatcacttctatgatatattcatctcagacacgatttccaaaaccagtgtttccaaaacatttttctccacctcc 41022154  T
Q  205 attgcaatttcttctgcatcattatggatattcatccatgattcgcgtctggccaagtccctttcaacaagctgttgtaatgttattggtgatggatgat 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41022155 attgcaatttcttctgcatcattatggatattcatccatgattcgcgtctggccaagtccctttcaacaagctgttgtaatgttattggtgatggatgat 41022254  T
Q  305 ggaaaaagtgaaggttaacaagttcattaatctgtctaaccaaaactttcttcacaacacatgcttggaagtttgaatttcttgatgaaaaatggggcga 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41022255 ggaaaaagtgaaggttaacaagttcattaatctgtctaaccaaaactttcttcacaacacatgcttggaagtttgaatttcttgatgaaaaatggggcga 41022354  T
Q  405 aaaaccactattctggtataactccatgaaacattcgatgatatactcatgcatgatggtaatgtcaaaaagttggtcagtcaatccattcacttcatca 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  41022355 aaaaccactattctggtataactccatgaaacattcgatgatatactcatgcatgatggtactgtcaaaaaattggtcagtcaatccattcacttcatca 41022454  T
Q  505 aaagtggatgaagaatccatcaataagtttgataaatggctcttcataggttcatcacatttcaagctgaaagtctgcagaacttcacttatgatatcct 604  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41022455 aaagtggatgaagaatccatcaataagtttgataaatggctcttcataggttcatcacatttcaagctgaaagtctgcagaacttcacttatgatatcct 41022554  T
Q  605 ttgagttgttcattggatccaaagaggatgttat 638  Q
    |||| |||||||||||||||||||||||||||||    
T  41022555 ttgacttgttcattggatccaaagaggatgttat 41022588  T

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