View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14392_low_45 (Length: 342)
Name: NF14392_low_45
Description: NF14392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14392_low_45 |
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Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 31 - 327
Target Start/End: Original strand, 43472670 - 43472965
Alignment:
| Q |
31 |
aagaatatgcaaacatttgtgatgcagaaattcaaaatgagaatgcagcatctgaggttgaaattagccacatttttactagtgacattgttgaagttga |
130 |
Q |
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| T |
43472670 |
aagaatatgcaaacatttgtgatgcagaaattcaaaatgagaatgcagcatctgaggttgaaattagccacatttttactagtgacactgttgaagttga |
43472769 |
T |
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| Q |
131 |
tgcctctaaaaatacaaaacttgctaaggtaccatacataatttatccaaattgtctgtttaaccttaaacaatatctatacaattgtgaagtgtgataa |
230 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
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| T |
43472770 |
tgcctctaaaaatacaaaacttgctaaggtaccatacataatttatccaaattgtctgtttaaccttaaa-tatatctatacaattgtgaagtgtaataa |
43472868 |
T |
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| Q |
231 |
atgattatttacattttacaatagtattgttgtcaaatagtggtgctatagcagaaattgaatagattgttattatatacgaaatttagtgcatagt |
327 |
Q |
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| T |
43472869 |
atgattatttacattttacaaaagtattgttgtcaaatagtggtgctatagcagaaattgaatagattgttattatatacgaaatttagtgcatagt |
43472965 |
T |
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