View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14392_low_61 (Length: 270)
Name: NF14392_low_61
Description: NF14392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14392_low_61 |
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Alignment Details
Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 255
Target Start/End: Complemental strand, 26372412 - 26372171
Alignment:
| Q |
14 |
actggggagaatattcagttgacacacacaaaaacaatttgaagtaaatgaacaattcactttttgaaaccaagcaaatgaacaatgcatagaaattttg |
113 |
Q |
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| T |
26372412 |
actggggagaatattcagttcagacacacaaaaacaatttgaagtaaatgaacaattcactttttgaaaccaagcaaatgaacaatgcatagaaattttg |
26372313 |
T |
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| Q |
114 |
gcacatggacttttttaacttgactcatgtgtagaggnnnnnnngttgtttggaattttcatatattaggctgataagcatttnnnnnnncaacaaatga |
213 |
Q |
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| T |
26372312 |
gcacatggacttttttagcttgactcatgtgtagaggaaaaaaagttgtttggaattttcatatattaggctgataagcatttaaaaaaacaacaaatga |
26372213 |
T |
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| Q |
214 |
ttgatattattctccatattactgaatgtgtatgatatattt |
255 |
Q |
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| T |
26372212 |
ttgatattattctccataatactgaatgtgtatgatatattt |
26372171 |
T |
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