View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14392_low_63 (Length: 259)
Name: NF14392_low_63
Description: NF14392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14392_low_63 |
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Alignment Details
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 46813495 - 46813721
Alignment:
| Q |
13 |
aatatattcaatagaagcaaacattttattagttaaataactatggacaattgttaaaaaatgaaacacacattcaattatataacgtaatatagacatg |
112 |
Q |
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| T |
46813495 |
aatatattcaatagaagcaaacattttattagttaaataactatggacaat-gtaagaaaatgaaacacacattcaattatataacgtaatatagacatg |
46813593 |
T |
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| Q |
113 |
nnnnnnntgatagtacttacttaagttactttcccacattggaatatattgacatccttttttacataaaggatctttaatgacgtggggaaatatactt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
46813594 |
aaaaaaatgatagtacttacttaagttactttcccacattggaatatattgacatccttttttacataaaggatctttaatgacgtggggaaatacactt |
46813693 |
T |
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| Q |
213 |
gctctatagcaataatcgtagcactgtt |
240 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
46813694 |
gctctatagcaataatcgtagcactgtt |
46813721 |
T |
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