View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14392_low_65 (Length: 251)
Name: NF14392_low_65
Description: NF14392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14392_low_65 |
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Alignment Details
Target: chr2 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 43562318 - 43562551
Alignment:
| Q |
1 |
ttaacatgtgtcagatgggtgtatggaaaaatggatgtccataaaatactcttagacataagatatagtgacccttaacccaccaatagtatattccact |
100 |
Q |
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| T |
43562318 |
ttaacatgtatcacatcggtgtatggaaaaatggacgttcataaaatactgttagacacaagatatagtgacccttaacccaccaatagtatattccact |
43562417 |
T |
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| Q |
101 |
attggaaatgcaaatttcaaaggttggnnnnnnnncatgaagaaaaagatataactatgtaagtgatgaaatcaacacggtaaaagaaacagaaaagtat |
200 |
Q |
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| T |
43562418 |
attggaagtgcaaatttcaaaggttggaaaaaaac--ggaagaaaaagatataactatataagtgatgaaatcaacacggtaaaagaaacagaaaagtat |
43562515 |
T |
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| Q |
201 |
gaagagaggattggattttccttttcttgtgtaaga |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
43562516 |
gaagagaggattggattttccttttcttgtgtaaga |
43562551 |
T |
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