View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14392_low_66 (Length: 250)
Name: NF14392_low_66
Description: NF14392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14392_low_66 |
 | |
|
| [»] scaffold0083 (2 HSPs) |
| | |
|
| [»] scaffold0002 (4 HSPs) |
| | |
|
| [»] scaffold0267 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 11485683 - 11485921
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11485683 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttgttgtggatggcagaaggcttcctggattattgtcatg |
11485782 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11485783 |
gccaaaaagtggtggaggaattcggcgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
11485882 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctacattcat |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11485883 |
tgtcatgcatgaccttgtcaatgatttagctacattcat |
11485921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 44957113 - 44956875
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
|||||||||||||| || ||||||||||||| ||||| |||| || ||| ||| ||||||| || |||||||||||||||||||| ||| || ||| | |
|
|
| T |
44957113 |
tgtttcgcctattgttctatttttccaaagggttacctgcttgctaagaaaaaaatggttttgttatggatggcagaaggcttccttgatatttctcaag |
44957014 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| ||||||||| ||||||| | | | ||||||||||||||||||||||||||||||| ||||||||||||| || ||||||| |||||||||||||||| |
|
|
| T |
44957013 |
gtgaaaaagtggcggaggaagttgtttatgattgttttgctgaattgttatctagatccttaattcaacaattaagtgatgatactcatggagaaaagtt |
44956914 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctacattcat |
239 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
44956913 |
tgtcatgcatgaccttgtcaacgatttagctacattcat |
44956875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 153; Significance: 3e-81; HSPs: 34)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 11781406 - 11781170
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||||||||||| ||||| ||| ||||||| |||||||||||||||||| |||| ||||||| ||| | |
|
|
| T |
11781406 |
tgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaactggttttgttgtggatggcagaaggcctccttgattattctcaag |
11781307 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
|| |||| |||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||| ||| ||||| |
|
|
| T |
11781306 |
gcgaaaatgtggtggaggaagttggtgatgattgttttgctgaattgttatcaagatcgttaattcaacaattaagcaatgatgctcatgaagagaagtt |
11781207 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctacattc |
237 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11781206 |
tgtcatgcatgaccttgtcaatgatttagctacattc |
11781170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 7 - 239
Target Start/End: Original strand, 10501225 - 10501457
Alignment:
| Q |
7 |
gcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaa |
106 |
Q |
| |
|
|||||||| || ||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||| ||| ||| |
|
|
| T |
10501225 |
gcctattgttctattttcccaaaagattacccactggataggaagaaattggttttgttgtggatggcagaaggcttccttgattattctcaaggcgaaa |
10501324 |
T |
|
| Q |
107 |
aagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcat |
206 |
Q |
| |
|
|| || ||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
10501325 |
aaacggcggaggaagtcggtgatgattattttgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcat |
10501424 |
T |
|
| Q |
207 |
gcatgaccttgtcaatgatttagctacattcat |
239 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||| |
|
|
| T |
10501425 |
gcatgaccttgttaatgatttagcaacattcat |
10501457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 10089435 - 10089673
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| || ||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| || ||||| |
|
|
| T |
10089435 |
tgttttgcatattgttcaatttttccaaaggattacccacttgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcatg |
10089534 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| ||||| | |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| || ||||||||| |||||||||||| |
|
|
| T |
10089535 |
ggggaaaagcgatggaggaattaggtgatgattgctttgctgaattgttatcgagatcgttaattcaacaattaagcaatgatgctcgtggagaaaagtt |
10089634 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctacattcat |
239 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||| |||| |
|
|
| T |
10089635 |
tgtcatgcatgaccttgtcaacgatttggctacagtcat |
10089673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 10196318 - 10196556
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| || ||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| || ||||| |
|
|
| T |
10196318 |
tgttttgcatattgttcaatttttccaaaggattacccacttgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcatg |
10196417 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| ||||| | |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| || ||||||||| |||||||||||| |
|
|
| T |
10196418 |
ggggaaaagcgatggaggaattaggtgatgattgctttgctgaattgttatcgagatcgttaattcaacaattaagcaatgatgctcgtggagaaaagtt |
10196517 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctacattcat |
239 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||| |||| |
|
|
| T |
10196518 |
tgtcatgcatgaccttgtcaacgatttggctacagtcat |
10196556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 10127573 - 10127809
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| || ||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||| |||| || ||| | |
|
|
| T |
10127573 |
tgttttgcatattgttcaatttttccaaaggatttcccacttgataagaagacattggttttgttgtggatggcagaaggcttccttgattgttctcaag |
10127672 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| ||||| | |||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| || |||||||||| |||||||||||| |
|
|
| T |
10127673 |
ggggaaaagagttggaggaattaggtgatgattgttttgctgaattgttatcgagatcattaattcaacaattaagcgatgatgctcgtggagaaaagtt |
10127772 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctacattc |
237 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10127773 |
tgtcatgcatgaccttgtcaatgatttatctacattc |
10127809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 10664171 - 10664407
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| || ||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| || ||| | |
|
|
| T |
10664171 |
tgttttgcatattgttcaatttttccaaaggattacccacttgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcaag |
10664270 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| ||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
10664271 |
gggggaaaacaatggaggaattaggtgatgattgttttgctgaattgttatcgagatctttaattcaacaatcaagcgatgatgctcatggcgaaaagtt |
10664370 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctacattc |
237 |
Q |
| |
|
||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
10664371 |
tgtgatgcatgaccttatcaatgatttagctacattc |
10664407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 10032648 - 10032886
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| || ||||| |||||||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||| |||| || ||| | |
|
|
| T |
10032648 |
tgttttgcatattgttcaatttttccaaaggattatccacttgaaaggaagacattggttttgctgtggatggcagaaggcttccttgattgttctcaag |
10032747 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| |||| | |||||||||| || ||||||||||||||||||||| |||| ||||||||||||||||||| || |||||||||| |||||||||||| |
|
|
| T |
10032748 |
ggggaaaaaagttggaggaattaggcgatgattgttttgctgaattgctatcgagatcgttaattcaacaattaagcgatgatgctcgtggagaaaagtt |
10032847 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctacattcat |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10032848 |
tgtcatgcatgaccttgtcaatgatttagctacattcat |
10032886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 10433459 - 10433232
Alignment:
| Q |
10 |
tattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaag |
109 |
Q |
| |
|
||||| ||||||||||||||||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||| |||| || ||| || ||||| |
|
|
| T |
10433459 |
tattgttcaatttttccaaaggattgcccactcgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcaagggggaaaag |
10433360 |
T |
|
| Q |
110 |
tggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgca |
209 |
Q |
| |
|
| |||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| || || ||||||| || ||||||||||||||||||||| |
|
|
| T |
10433359 |
agttggaggaattaggtaatgattgttttgctgaattgttatcgagatcgttaattcaacgattaaccgatgatgatcgtggagaaaagtttgtcatgca |
10433260 |
T |
|
| Q |
210 |
tgaccttgtcaatgatttagctacattc |
237 |
Q |
| |
|
||||||||||||||||||| |||||||| |
|
|
| T |
10433259 |
tgaccttgtcaatgatttatctacattc |
10433232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 11769879 - 11770117
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||| ||||| |||| || ||| | |
|
|
| T |
11769879 |
tgttttgcatattgttcaatttttccaaaggactacccacttgataggaagaaattgattttgttgtggatggcagaaggattccttgattgttctcaag |
11769978 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| ||| | ||||||| || ||||||||||| ||||||||||||||||| ||||||||||||||||||| || ||||||||||| |||||||||||| |
|
|
| T |
11769979 |
gtgggaaaaagttggaggacttgggtgatgattggtttgctgaattgttatcgagatcgttaattcaacaattaagtgatgatgctcgtggagaaaagtt |
11770078 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctacattcat |
239 |
Q |
| |
|
||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
11770079 |
tgttatgcatgaccttgtaaatgatttagctacattcat |
11770117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 10261343 - 10261576
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| || ||||| |||||||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||| |||| || ||| | |
|
|
| T |
10261343 |
tgttttgcatattgttcaatttttccaaaggattatccacttgaaaggaagacattggttttgctgtggatggcagaaggcttccttgattgttctcaag |
10261442 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| |||| | |||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||| |||||||||||| |
|
|
| T |
10261443 |
ggggaaaaaagttggaggaattaggcgatgattgttttgctgaattgttatcgagatcgttaattcaacaattaagcgatgatgctcgtggagaaaagtt |
10261542 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctaca |
234 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
10261543 |
tgtcatgcatgaccttgtcagtgatttagctaca |
10261576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 9839515 - 9839742
Alignment:
| Q |
10 |
tattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaag |
109 |
Q |
| |
|
||||| ||||||||||||||||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||| |||| || ||| | ||| |
|
|
| T |
9839515 |
tattgttcaatttttccaaaggattgcccactcgataggaaggaattggttttgttgtggatggcagaaggcttccttgattgttctcaacgggggaaaa |
9839614 |
T |
|
| Q |
110 |
tggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgca |
209 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||| || ||| ||||| ||||||||||| |
|
|
| T |
9839615 |
agatggaggaattaggtgatgattgttttgctgaattgttatcgagatcgttaattcaacaattaagcgatgatgatcgtggggaaaaatttgtcatgca |
9839714 |
T |
|
| Q |
210 |
tgaccttgtcaatgatttagctacattc |
237 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
9839715 |
tgaccttgtcaatgatttagctacattc |
9839742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 9850393 - 9850620
Alignment:
| Q |
10 |
tattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaag |
109 |
Q |
| |
|
||||| ||||||||||||||||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||| |||| || ||| | ||| |
|
|
| T |
9850393 |
tattgttcaatttttccaaaggattgcccactcgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcaacgggggaaaa |
9850492 |
T |
|
| Q |
110 |
tggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgca |
209 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||| || ||| ||||| ||||||||||| |
|
|
| T |
9850493 |
agatggaggaattaggtgatgattgttttgctgaattgttatcgagatcgttaattcaacaattaagcgatgatgatcgtggggaaaaatttgtcatgca |
9850592 |
T |
|
| Q |
210 |
tgaccttgtcaatgatttagctacattc |
237 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
9850593 |
tgaccttgtcaatgatttagctacattc |
9850620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 10518130 - 10518372
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||||| ||| | |
|
|
| T |
10518130 |
tgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggtttccttgattattctcaag |
10518229 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
|||| | | |||||||| | ||||||||||||||||||||||| ||||| ||||| ||||||||||||| || |||||||||||| | |||||| |
|
|
| T |
10518230 |
atgaaaatgcgatggaggaaattggtgatgattgttttgctgaattattatcaagatcattaattcaacaattaagcaatgatgctcatgaaaaaaagtg |
10518329 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctacattcatctca |
243 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||| ||||| |
|
|
| T |
10518330 |
tgtcatgcatgaccttgtccacgatttagctacattcgtctca |
10518372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 10581264 - 10581491
Alignment:
| Q |
10 |
tattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaag |
109 |
Q |
| |
|
||||| ||||||||||||||||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||| |||| || || || ||| |
|
|
| T |
10581264 |
tattgttcaatttttccaaaggattgcccactcgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttcacaaggggggaaaa |
10581363 |
T |
|
| Q |
110 |
tggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgca |
209 |
Q |
| |
|
| |||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||| || ||||||| || ||| ||||| ||||||||||| |
|
|
| T |
10581364 |
agttggaggaattaggtgatgattgttttgttgaattgttatcgagatcgttaattcaacaattaagcgatgatgatcgtggggaaaaatttgtcatgca |
10581463 |
T |
|
| Q |
210 |
tgaccttgtcaatgatttagctacattc |
237 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
10581464 |
tgaccttgtcaatgatttagctacattc |
10581491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 10363213 - 10362986
Alignment:
| Q |
10 |
tattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaag |
109 |
Q |
| |
|
||||| ||||||||||||||||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||| |||| || ||| || ||| |
|
|
| T |
10363213 |
tattgttcaatttttccaaaggattgcccactcgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcaaggggggaaaa |
10363114 |
T |
|
| Q |
110 |
tggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgca |
209 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| || ||| ||||| ||||||||||| |
|
|
| T |
10363113 |
agttggaggaattaggtgatgattgttttgctgaattgttatcgagatcgttaattcaacaattaagcaatgatgatcgtggggaaaaatttgtcatgca |
10363014 |
T |
|
| Q |
210 |
tgaccttgtcaatgatttagctacattc |
237 |
Q |
| |
|
||||||||| ||||||||||| |||||| |
|
|
| T |
10363013 |
tgaccttgttaatgatttagcaacattc |
10362986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 10375269 - 10375033
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| || ||||| ||||||||||| ||||||| |||||||||||||||| |||||||||| |||||||||||||||||||| || |||| || ||| | |
|
|
| T |
10375269 |
tgttttgcatattgttcaatttttcccaaggattgcccacttgataggaagcaattggttttgttgtggatggcagaaggctttcttgattgttctcaag |
10375170 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| ||||| |||||||||| || |||||||||||||||||||||||| ||||| ||||||||||||| || ||||||||| |||| ||||||| |
|
|
| T |
10375169 |
ggggaaaagatttggaggaattaggcaatgattgttttgctgaattgttattgagatcattaattcaacaattaagcgatgatgcttgtggaaaaaagtt |
10375070 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctacattc |
237 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10375069 |
tgtcatgcatgaccttgtcaatgatttatctacattc |
10375033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 10077914 - 10078147
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| || ||||| |||||||||||||||| | || ||||||| ||||||||||||||||| ||||||||||||||||||| || ||||||| |||| |
|
|
| T |
10077914 |
tgttttgcatattgttcaatttttccaaagggtcacacacttgacaggaagaaattggttttgctgtggatggcagaaggctttcttgattattcacatg |
10078013 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| | ||| | |||| ||||| |||| |||||| ||||||||||| || || ||||| ||||||||||||||||||||| ||| || |||||||||||| |
|
|
| T |
10078014 |
gggagaaaacgatggaagaattaggtggtgattgctttgctgaattattgtccagatccttaattcaacaatcaaatgataatggtcgtggagaaaagtt |
10078113 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctaca |
234 |
Q |
| |
|
| ||||||||||||||||||||||||| |||||| |
|
|
| T |
10078114 |
tttcatgcatgaccttgtcaatgatttggctaca |
10078147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 10184887 - 10185120
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| || ||||| || ||||||||||||| | || ||| ||| ||||||||||||||||| ||||||||||||||||||| || ||||||| |||| |
|
|
| T |
10184887 |
tgttttgcatattgttctatttttccaaagggtcacacacatgacaggaagaaattggttttgctgtggatggcagaaggctttcttgattattcacatg |
10184986 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| | ||| | |||| ||||| ||||||||||| ||||||||||| || || ||||| ||||||||||||||||||||| ||| || |||||||||||| |
|
|
| T |
10184987 |
gggagaaaacgatggaagaattaggtgatgattgctttgctgaattattgtccagatccttaattcaacaatcaaatgataatggtcgtggagaaaagtt |
10185086 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctaca |
234 |
Q |
| |
|
| ||||||||||||||||||||||||| |||||| |
|
|
| T |
10185087 |
tttcatgcatgaccttgtcaatgatttggctaca |
10185120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 10528003 - 10528236
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| || ||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||| |||| || ||| | |
|
|
| T |
10528003 |
tgttttgcatattgttcaatttttccaaaggatttcccacttgataagaagacattggttttgttgtggatggcagaaggcttcctcgattgttctcaag |
10528102 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
|||| ||| |||||| | |||||||| || |||||||||||||| || ||||| |||||||| ||||||||| ||| || || |||| ||||||| |
|
|
| T |
10528103 |
agggaaaaatggcagaggaagtaggtgatgactgctttgctgaattgttgtccagatccttaattcagcaatcaaatcatgttggtcgtggaaaaaagtt |
10528202 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctaca |
234 |
Q |
| |
|
| ||||||||||||||||||| |||||||||||| |
|
|
| T |
10528203 |
tttcatgcatgaccttgtcaacgatttagctaca |
10528236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 13854104 - 13853871
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| || ||||| ||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| || ||| | |
|
|
| T |
13854104 |
tgttttgcatattgttcaatttttccaaaggactacccacttgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcaag |
13854005 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| |||| || |||||||| ||||||||||| ||| |||||||| ||| ||||| ||||||||||||||||||||||||| | |||| ||| || |
|
|
| T |
13854004 |
ggggaaaaatgactgaggaatttggtgatgattgctttcttgaattgtcatccagatccttaattcaacaatcaaatgatgatggttttggaaaaatctt |
13853905 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctaca |
234 |
Q |
| |
|
| ||||||||||||||||||| || ||||||||| |
|
|
| T |
13853904 |
tttcatgcatgaccttgtcaacgacttagctaca |
13853871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 10672327 - 10672560
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| || ||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||| |||| || ||| | |
|
|
| T |
10672327 |
tgttttgcatattgttcaatttttccaaaggatttcccacttgataagaagacattggttttgttgtggatggcagaaggcttcctcgattgttctcaag |
10672426 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
|||| ||| |||||| | |||||||| || |||||||||||||| || ||||| |||||||| ||||||||||||| || || |||| ||||||| |
|
|
| T |
10672427 |
agggaaaaatggcagaggaagtaggtgatgactgctttgctgaattgttgtccagatccttaattcagcaatcaaatgatgttggtcgtggaaaaaagtt |
10672526 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctaca |
234 |
Q |
| |
|
| |||| ||||||||| |||| |||||| ||||| |
|
|
| T |
10672527 |
tttcatacatgaccttatcaacgatttaactaca |
10672560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 234
Target Start/End: Complemental strand, 11159432 - 11159208
Alignment:
| Q |
10 |
tattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaag |
109 |
Q |
| |
|
||||| || |||||||||||||| || |||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||| | | |||||| |
|
|
| T |
11159432 |
tattgttccatttttccaaaggactatacacttgataggaagcaattggttttgttgtggatggcagaaggcttccttgattattctcaggacgaaaaag |
11159333 |
T |
|
| Q |
110 |
tggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgca |
209 |
Q |
| |
|
|||| ||| | ||||||||||||||||||||||||||||| ||||| |||||||||||| | ||| || | | | |||||||||||||||| |
|
|
| T |
11159332 |
ccatggaagaagtaggtgatgattgttttgctgaattgttatccagatcattaattcaacaactacatgttggtaccagaaaacaaaagtttgtcatgca |
11159233 |
T |
|
| Q |
210 |
tgaccttgtcaatgatttagctaca |
234 |
Q |
| |
|
||||||||| ||||||||||||||| |
|
|
| T |
11159232 |
tgaccttgttaatgatttagctaca |
11159208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 10889969 - 10890184
Alignment:
| Q |
19 |
atttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggagg |
118 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||| | ||| ||| ||| | ||||| |||| | |
|
|
| T |
10889969 |
atttttccaaaggactatacacttgataggaagaaattggttttgttgtggatggcagaaggcttcattgatcattctcaagatggaaaagctatggaag |
10890068 |
T |
|
| Q |
119 |
aattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgt |
218 |
Q |
| |
|
|| | |||||||| || ||| ||||||||||||||||||| |||||||| ||| |||||||| || | ||| ||| |||||||||||||||||||| |
|
|
| T |
10890069 |
aagtaggtgatgagtgcttttctgaattgttatctagatcattaattcagcaactgtatgatgattctgaaggacaaatatttgtcatgcatgaccttgt |
10890168 |
T |
|
| Q |
219 |
caatgatttagctaca |
234 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
10890169 |
taatgatttagctaca |
10890184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 11246045 - 11245814
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| |||||||| || |||||||| ||||| || ||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||| ||| | |
|
|
| T |
11246045 |
tgttttgcctattgttcgatttttccgaaggactatccacttgataggaagcaattggttttgttgtggatggcagaaggcttccttgatcattctcaag |
11245946 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
||||| |||| ||| | |||||||| || ||| ||||||||||||||||||| |||||||| || ||| |||| || | ||| ||| || |
|
|
| T |
11245945 |
atggaaaagctatggaagaagtaggtgatgagtgcttttctgaattgttatctagatcattaattcagaaactgcatggtgattctgaaggacaaatatt |
11245846 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagcta |
232 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| |
|
|
| T |
11245845 |
tgtcatgcatgaccttgttaatgatttagcta |
11245814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 234
Target Start/End: Original strand, 8861940 - 8862164
Alignment:
| Q |
10 |
tattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaag |
109 |
Q |
| |
|
||||| || |||||||||||||| || ||||| |||||||| ||||||| || ||||||||||||||||||||||| ||| ||| | | | ||||| |
|
|
| T |
8861940 |
tattgttccatttttccaaaggactattcacttaataggaagcaattggtattgttgtggatggcagaaggcttccttgatcattctaaagatgaaaaac |
8862039 |
T |
|
| Q |
110 |
tggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgca |
209 |
Q |
| |
|
|||| || | ||||||||||||||||||||| ||||||| ||||| |||||||||||| | ||| || | || | | |||||||||||||||| |
|
|
| T |
8862040 |
ccatggaagatgtaggtgatgattgttttgctgaactgttatccagatcattaattcaacaactacatgttggtactagagaacaaaagtttgtcatgca |
8862139 |
T |
|
| Q |
210 |
tgaccttgtcaatgatttagctaca |
234 |
Q |
| |
|
||||||||| ||||||||||||||| |
|
|
| T |
8862140 |
tgaccttgttaatgatttagctaca |
8862164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 234
Target Start/End: Complemental strand, 11130441 - 11130217
Alignment:
| Q |
10 |
tattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaag |
109 |
Q |
| |
|
||||| || |||||||||||||| || ||||| |||||||| |||||||||| ||||||||||||||||||||||| ||| ||| | | | | ||||| |
|
|
| T |
11130441 |
tattgttccatttttccaaaggactatacactttataggaagcaattggttttgttgtggatggcagaaggcttccttgatcattctaaagacgaaaaac |
11130342 |
T |
|
| Q |
110 |
tggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgca |
209 |
Q |
| |
|
|||| ||| | ||||||||||||||||| ||| ||||||| || || |||||||||||| | ||| |||| || ||||||| |||||||||||| |
|
|
| T |
11130341 |
ccatggaagaagtaggtgatgattgttttgcagaactgttatccaggtcattaattcaacaactacatgttgatactagaggagaaaggtttgtcatgca |
11130242 |
T |
|
| Q |
210 |
tgaccttgtcaatgatttagctaca |
234 |
Q |
| |
|
|| |||| ||||| ||||||||| |
|
|
| T |
11130241 |
cgattttgttaatgacttagctaca |
11130217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 234
Target Start/End: Complemental strand, 11148269 - 11148045
Alignment:
| Q |
10 |
tattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaag |
109 |
Q |
| |
|
||||| || |||||||||||||| || ||||| ||||||| ||||||| || ||||||||||||||||||||||| ||| ||| | | | | ||||| |
|
|
| T |
11148269 |
tattgttccatttttccaaaggactattcacttaataggaatcaattggtattgttgtggatggcagaaggcttccttgatcattctaaagacgaaaaac |
11148170 |
T |
|
| Q |
110 |
tggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgca |
209 |
Q |
| |
|
| || ||| | ||||||||||||||||||||| ||||||| ||||| ||||||||||| | ||| |||| || ||||||| |||||||||||| |
|
|
| T |
11148169 |
ccattgaagaagtaggtgatgattgttttgctgaactgttatccagatcattaattcaacagctacatgttgatactagaggagaaaggtttgtcatgca |
11148070 |
T |
|
| Q |
210 |
tgaccttgtcaatgatttagctaca |
234 |
Q |
| |
|
|| |||| ||||| ||||||||| |
|
|
| T |
11148069 |
cgattttgttaatgagttagctaca |
11148045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 13290310 - 13290536
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||| ||||||| | |||| ||||| |||| || |||||||||||||||||||| || ||| ||| |
|
|
| T |
13290310 |
tgttttgcctattgctcaatttttccgaaggatttttcacttgacaagaaggaattgattttgttatggatggcagaaggcttcctagagcattctcagt |
13290409 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| | ||| | |||||| | ||| |||| | ||| |||||||||||| || || ||||||||||||||||||||||||| | |||||| || |
|
|
| T |
13290410 |
gtaataaaacagctgaggaagtaggtcatgactactttattgaattgttatccaggtccttaattcaacaatcaaatgatgatggaaa---agaaaaatt |
13290506 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagc |
230 |
Q |
| |
|
||| ||||| |||||||||||||||||||| |
|
|
| T |
13290507 |
tgttatgcacgaccttgtcaatgatttagc |
13290536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 13333549 - 13333775
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||| |||||||| | |||| ||||| |||| || |||||||||||||||||||| || ||| ||| |
|
|
| T |
13333549 |
tgttttgcctattgctcaatttttccgaaggattttccacttgacaagaaggaattgattttgttatggatggcagaaggcttcctagagcattctcaac |
13333648 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| | ||| | |||||| | || |||| | ||| |||||||||||| || || ||||||||||||||||||||||||| | |||||| || |
|
|
| T |
13333649 |
gtaataaaacagctgaggaagtaggccatgactactttattgaattgttatccaggtccttaattcaacaatcaaatgatgatggaaa---agaaaaatt |
13333745 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagc |
230 |
Q |
| |
|
||| ||||| |||||||||||||||||||| |
|
|
| T |
13333746 |
tgttatgcacgaccttgtcaatgatttagc |
13333775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 13344734 - 13344960
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| ||||| || | |||| ||||| |||| || |||||||||||||||||||| || ||| ||| |
|
|
| T |
13344734 |
tgttttgcctattgctcaatttttccaaaggattttccactggacaagaaggaattgattttgttatggatggcagaaggcttcctagagcattctcaac |
13344833 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| | ||| | |||||| | || |||| | ||| |||||||||||| || || ||||||||||||||||||||||||| | |||||| || |
|
|
| T |
13344834 |
gtaataaaacagctgaggaagtaggccatgactactttattgaattgttatccaggtccttaattcaacaatcaaatgatgatggaaa---agaaaaatt |
13344930 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagc |
230 |
Q |
| |
|
||| ||||| |||||||||||||||||||| |
|
|
| T |
13344931 |
tgttatgcacgaccttgtcaatgatttagc |
13344960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 13161625 - 13161710
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcct |
86 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||| |||||||| | |||| ||||| |||| || |||||||||||||||||||| |
|
|
| T |
13161625 |
tgttttgcctattgctcaatttttccgaaggattttccacttgacaagaaggaattgattttgttatggatggcagaaggcttcct |
13161710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 13396134 - 13396219
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcct |
86 |
Q |
| |
|
||||| ||||||||||| ||||||||||||| || || || |||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
13396134 |
tgttttgcctattgctcgatttttccaaagggctatccctttaataggaagaaattgattttgttgtggatggcagaaggcttcct |
13396219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 13171676 - 13171902
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||| ||||| || | |||| ||||| |||| || |||||||||||||||||||| || ||| ||| |
|
|
| T |
13171676 |
tgttttgcctattgctcaatttttccgaaggattttccactggacaagaaggaattgattttgttatggatggcagaaggcttcctagagcattctcaac |
13171775 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| | ||| | |||||| | || |||| | ||| |||||||||||| || | ||||||||||||||||||||||||| | |||||| || |
|
|
| T |
13171776 |
gtaataaaacagctgaggaagtaggccatgactactttattgaattgttatccaggtgcttaattcaacaatcaaatgatgatggaaa---agaaaaatt |
13171872 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagc |
230 |
Q |
| |
|
||| |||||||||||||||||||||||||| |
|
|
| T |
13171873 |
tgttatgcatgaccttgtcaatgatttagc |
13171902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 230
Target Start/End: Original strand, 13161765 - 13161851
Alignment:
| Q |
141 |
tgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagc |
230 |
Q |
| |
|
|||||||||||| || || ||||||||||||||||||||||||| | |||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
13161765 |
tgaattgttatccaggtccttaattcaacaatcaaatgatgatggaaa---agaaaaatttgttatgcacgaccttgtcaatgatttagc |
13161851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 26907542 - 26907775
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| || ||||| ||| |||||||||||||||| ||||||||||| ||| ||||||| || ||||||||||||||||||||||| || | || ||| | |
|
|
| T |
26907542 |
tgttttgcatattgttcactttttccaaaggattatccacttgatagaaagcaattggtcttgttgtggatggcagaaggcttccttgactgttctcaag |
26907641 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| ||||| | | ||||| || |||||||||| |||||||||||| |||| ||||| |||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
26907642 |
ggggaaaagagttagaggagttaggtgatgatttctttgctgaattgctatccagatccttaattcaacaatcaaatgatgatgctcgtggggaaaagtt |
26907741 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctaca |
234 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
26907742 |
tgtcatgcatgaccttgtcaatgatttagctaca |
26907775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 57017 - 56790
Alignment:
| Q |
10 |
tattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaag |
109 |
Q |
| |
|
||||| ||||||||||||||||||| |||||| |||| |||| |||||||||| ||||||||||||||||| ||||| |||| || ||| || ||| |
|
|
| T |
57017 |
tattgttcaatttttccaaaggattgcccactcgataagaagcaattggttttgttgtggatggcagaaggtttccttgattgttctcaaggggggaaaa |
56918 |
T |
|
| Q |
110 |
tggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgca |
209 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||| || ||| ||||| ||||||||||| |
|
|
| T |
56917 |
agttggaggaattaggtgatgattgttttgctgaattgttatcgagatcgttaattcaacaattaagcgatgatgatcgtggggaaaaatttgtcatgca |
56818 |
T |
|
| Q |
210 |
tgaccttgtcaatgatttagctacattc |
237 |
Q |
| |
|
||||||| |||||||||||||||||||| |
|
|
| T |
56817 |
tgaccttatcaatgatttagctacattc |
56790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 57826 - 57599
Alignment:
| Q |
10 |
tattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaag |
109 |
Q |
| |
|
||||| ||||||||||||||||||| |||||| |||| |||| |||||||||| ||||||||||||||||| ||||| |||| || ||| || ||| |
|
|
| T |
57826 |
tattgttcaatttttccaaaggattgcccactcgataagaagcaattggttttgttgtggatggcagaaggtttccttgattgttctcaaggggggaaaa |
57727 |
T |
|
| Q |
110 |
tggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgca |
209 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||| || ||| ||||| ||||||||||| |
|
|
| T |
57726 |
agttggaggaattaggtgatgattgttttgctgaattgttatcgagatcgttaattcaacaattaagcgatgatgatcgtggggaaaaatttgtcatgca |
57627 |
T |
|
| Q |
210 |
tgaccttgtcaatgatttagctacattc |
237 |
Q |
| |
|
||||||| |||||||||||||||||||| |
|
|
| T |
57626 |
tgaccttttcaatgatttagctacattc |
57599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 29837285 - 29837498
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| | ||||||||||||| |||||||||| ||||||||||||||||| ||| | || ||| || | |
|
|
| T |
29837285 |
tgtttcgcctattgttcaatttttccaaaggattatcaacttgataggaagcaattggttttgttgtggatggcagaaggattcattgagcattatctag |
29837384 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| | ||||| | |||||| | ||| | || | |||||||||||| |||||||||| |||||||||||| || |||||||| || |||||||||| || |
|
|
| T |
29837385 |
gtccaaaagaagcagaggaaataggtaacgagttctttgctgaattgatatctagatccttaattcaacaagcatatgatgatactgatggagaaaaatt |
29837484 |
T |
|
| Q |
201 |
tgtcatgcatgacc |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
29837485 |
tgtcatgcatgacc |
29837498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 17852347 - 17852114
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| || ||||| |||||||| ||||||||||| || |||||||||||||||||||||| ||||||||||||||||| ||||| || |||| ||| | |
|
|
| T |
17852347 |
tgttttgcatattgttcaattttctcaaaggattactcatttgataggaagaaattggttttgttgtggatggcagaaggattcctcgactattctcaag |
17852248 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| ||||| | |||||| | ||||| || |||||| ||||||||||||| ||||| |||||||||||| ||||||||||| |||||| ||||||| |
|
|
| T |
17852247 |
ggggaaaagcagcagaggaagtgggtgacgactgtttttctgaattgttatccagatccttaattcaacaaacaaatgatgattctcatgagaaaaagtt |
17852148 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctaca |
234 |
Q |
| |
|
| ||||||| | ||||||| | || ||||||||| |
|
|
| T |
17852147 |
tttcatgcacggccttgtctacgacttagctaca |
17852114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 31679157 - 31678924
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
|||||||| ||||| |||||||| ||||||||||| || |||||||||||| || ||||||| |||||||||| ||||||||||| || ||| ||| | |
|
|
| T |
31679157 |
tgtttcgcttattgttcaattttcccaaaggattatcctcttgataggaagcaaatggttttgctgtggatggctgaaggcttccttgaacattctcaag |
31679058 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| |||||| |||||||| | |||||||| | |||| ||||||||||||||||||||||||||||||||| | |||||| | || | ||||| |
|
|
| T |
31679057 |
gagaaaaagcaatggaggaagttggtgatgactactttgttgaattgttatctagatcgttaattcaacaatcgcacgatgattttggaagacagaagtt |
31678958 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagctaca |
234 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||| |
|
|
| T |
31678957 |
tctcatgcatgatcttgtcaatgatttagctaca |
31678924 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 145363 - 145137
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||| |||||||| | |||| ||||| |||| || |||||||||||||||||||| || ||| ||| |
|
|
| T |
145363 |
tgttttgcctattgctcaatttttccgaaggattttccacttgacaagaaggaattgattttgttatggatggcagaaggcttcctagagcattctcaac |
145264 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| | ||| | |||||| | || |||| | ||| |||||||||||| || || ||||||||||||||||||||||||| | |||||| || |
|
|
| T |
145263 |
gtaataaaacagctgaggaagtaggccatgactactttattgaattgttatccaggtccttaattcaacaatcaaatgatgatggaaa---agaaaaatt |
145167 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagc |
230 |
Q |
| |
|
||| ||||| |||||||||||||||||||| |
|
|
| T |
145166 |
tgttatgcacgaccttgtcaatgatttagc |
145137 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 153668 - 153583
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcct |
86 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||| |||||||| | |||| ||||| |||| || |||||||||||||||||||| |
|
|
| T |
153668 |
tgttttgcctattgctcaatttttccgaaggattttccacttgacaagaaggaattgattttgttatggatggcagaaggcttcct |
153583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 135312 - 135086
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatg |
100 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||| ||||| || | |||| ||||| |||| || |||||||||||||||||||| || ||| ||| |
|
|
| T |
135312 |
tgttttgcctattgctcaatttttccgaaggattttccactggacaagaaggaattgattttgttatggatggcagaaggcttcctagagcattctcaac |
135213 |
T |
|
| Q |
101 |
gccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtt |
200 |
Q |
| |
|
| | ||| | |||||| | || |||| | ||| |||||||||||| || | ||||||||||||||||||||||||| | |||||| || |
|
|
| T |
135212 |
gtaataaaacagctgaggaagtaggccatgactactttattgaattgttatccaggtgcttaattcaacaatcaaatgatgatggaaa---agaaaaatt |
135116 |
T |
|
| Q |
201 |
tgtcatgcatgaccttgtcaatgatttagc |
230 |
Q |
| |
|
||| |||||||||||||||||||||||||| |
|
|
| T |
135115 |
tgttatgcatgaccttgtcaatgatttagc |
135086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 153528 - 153442
Alignment:
| Q |
141 |
tgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagc |
230 |
Q |
| |
|
|||||||||||| || || ||||||||||||||||||||||||| | |||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
153528 |
tgaattgttatccaggtccttaattcaacaatcaaatgatgatggaaa---agaaaaatttgttatgcacgaccttgtcaatgatttagc |
153442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 826547 - 826632
Alignment:
| Q |
1 |
tgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttcttgtggatggcagaaggcttcct |
86 |
Q |
| |
|
||||||| |||||||||||||||||| |||| ||| || ||||| | ||| | |||||||| ||||||||||||||||||||||| |
|
|
| T |
826547 |
tgtttcgtctattgctcaatttttcccaagggttatccccttgaaaaaaagcatttggttttgttgtggatggcagaaggcttcct |
826632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0267 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0267
Description:
Target: scaffold0267; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 234
Target Start/End: Original strand, 19311 - 19340
Alignment:
| Q |
205 |
atgcatgaccttgtcaatgatttagctaca |
234 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
19311 |
atgcatgaccttgtcaatgatttagctaca |
19340 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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