View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14393_high_1 (Length: 816)

Name: NF14393_high_1
Description: NF14393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14393_high_1
NF14393_high_1
[»] chr6 (28 HSPs)
chr6 (18-384)||(27788608-27788972)
chr6 (18-401)||(20711638-20712020)
chr6 (17-401)||(17353757-17354143)
chr6 (28-400)||(28075587-28075964)
chr6 (17-401)||(235142-235527)
chr6 (18-252)||(13727317-13727551)
chr6 (18-252)||(21280499-21280733)
chr6 (22-360)||(34397703-34398039)
chr6 (18-252)||(21479448-21479683)
chr6 (104-384)||(19986982-19987253)
chr6 (19-252)||(33774071-33774305)
chr6 (99-275)||(19737691-19737867)
chr6 (17-219)||(24710913-24711118)
chr6 (18-219)||(30832443-30832643)
chr6 (18-180)||(27314097-27314259)
chr6 (20-198)||(1155767-1155947)
chr6 (106-201)||(2477590-2477685)
chr6 (106-201)||(6159443-6159538)
chr6 (111-201)||(21183686-21183776)
chr6 (107-201)||(20611795-20611889)
chr6 (123-202)||(4036952-4037031)
chr6 (100-185)||(30121783-30121868)
chr6 (156-200)||(27994775-27994819)
chr6 (333-387)||(30832666-30832720)
chr6 (334-384)||(23070889-23070939)
chr6 (335-384)||(11081684-11081733)
chr6 (335-384)||(13727650-13727699)
chr6 (323-384)||(19741212-19741273)
[»] chr8 (49 HSPs)
chr8 (18-384)||(23798179-23798545)
chr8 (18-401)||(42600582-42600967)
chr8 (18-384)||(23606548-23606905)
chr8 (17-384)||(10917210-10917576)
chr8 (18-275)||(45475745-45476001)
chr8 (21-275)||(13534609-13534861)
chr8 (21-275)||(13624149-13624401)
chr8 (18-252)||(2952137-2952373)
chr8 (21-252)||(30883280-30883512)
chr8 (18-275)||(41879109-41879364)
chr8 (18-252)||(3048435-3048669)
chr8 (18-219)||(37430076-37430277)
chr8 (100-252)||(5860744-5860896)
chr8 (99-201)||(7944521-7944623)
chr8 (107-201)||(8102914-8103008)
chr8 (99-201)||(15167414-15167516)
chr8 (99-197)||(11290190-11290288)
chr8 (107-201)||(15078760-15078854)
chr8 (100-201)||(39332405-39332506)
chr8 (122-201)||(5942698-5942777)
chr8 (99-201)||(5973106-5973208)
chr8 (108-201)||(5721561-5721654)
chr8 (100-179)||(30674403-30674482)
chr8 (99-201)||(41677172-41677275)
chr8 (99-197)||(34789861-34789959)
chr8 (99-194)||(8646215-8646309)
chr8 (100-197)||(14509983-14510079)
chr8 (107-201)||(25561502-25561594)
chr8 (18-87)||(20003728-20003797)
chr8 (106-179)||(23941097-23941170)
chr8 (100-199)||(34048705-34048806)
chr8 (205-250)||(25561635-25561680)
chr8 (204-248)||(8102845-8102889)
chr8 (203-250)||(15167540-15167587)
chr8 (203-250)||(41677300-41677347)
chr8 (205-250)||(8646129-8646174)
chr8 (100-145)||(9108551-9108596)
chr8 (206-250)||(30674507-30674551)
chr8 (99-151)||(38009151-38009203)
chr8 (203-250)||(7944649-7944696)
chr8 (333-384)||(20003875-20003926)
chr8 (107-146)||(34868184-34868223)
chr8 (309-384)||(45472207-45472281)
chr8 (32-86)||(5860674-5860728)
chr8 (204-250)||(11290113-11290159)
chr8 (335-384)||(2952473-2952522)
chr8 (335-384)||(3048774-3048823)
chr8 (335-384)||(5860996-5861045)
chr8 (205-250)||(15078689-15078734)
[»] chr3 (55 HSPs)
chr3 (17-401)||(43207156-43207542)
chr3 (548-808)||(26403268-26403527)
chr3 (22-400)||(44708281-44708660)
chr3 (18-399)||(53506802-53507183)
chr3 (17-399)||(34290553-34290940)
chr3 (18-399)||(50939152-50939534)
chr3 (18-382)||(54407073-54407439)
chr3 (99-400)||(9878686-9878986)
chr3 (22-349)||(37168223-37168551)
chr3 (24-399)||(48156942-48157310)
chr3 (18-275)||(8073257-8073512)
chr3 (18-252)||(54619121-54619355)
chr3 (18-252)||(38681011-38681245)
chr3 (19-275)||(3953816-3954071)
chr3 (18-219)||(21582758-21582960)
chr3 (18-219)||(47467671-47467872)
chr3 (17-252)||(36715941-36716177)
chr3 (18-252)||(27078486-27078721)
chr3 (18-252)||(27084283-27084518)
chr3 (21-219)||(53149235-53149433)
chr3 (18-219)||(42098788-42098989)
chr3 (32-251)||(18372434-18372656)
chr3 (400-517)||(26403558-26403679)
chr3 (21-198)||(36605973-36606149)
chr3 (18-207)||(50258542-50258731)
chr3 (135-252)||(29620423-29620540)
chr3 (99-201)||(54574826-54574928)
chr3 (107-201)||(8420331-8420425)
chr3 (99-185)||(26279563-26279649)
chr3 (107-197)||(28689368-28689458)
chr3 (107-201)||(32319162-32319256)
chr3 (100-197)||(49393099-49393195)
chr3 (16-87)||(48720427-48720498)
chr3 (100-193)||(25855435-25855527)
chr3 (18-80)||(29620364-29620426)
chr3 (334-400)||(48720530-48720596)
chr3 (100-201)||(789941-790042)
chr3 (628-733)||(26395415-26395520)
chr3 (710-794)||(26402493-26402577)
chr3 (99-175)||(42453435-42453511)
chr3 (111-164)||(23641329-23641382)
chr3 (203-250)||(8420258-8420305)
chr3 (204-250)||(29598040-29598086)
chr3 (99-201)||(52374661-52374763)
chr3 (205-250)||(49393023-49393068)
chr3 (203-250)||(52374590-52374637)
chr3 (333-390)||(47467591-47467648)
chr3 (133-200)||(29598113-29598179)
chr3 (333-384)||(50258733-50258784)
chr3 (335-385)||(36605861-36605911)
chr3 (335-384)||(27078819-27078868)
chr3 (335-384)||(27084616-27084665)
chr3 (335-384)||(36716276-36716325)
chr3 (335-384)||(38681348-38681397)
chr3 (335-384)||(54619454-54619503)
[»] chr2 (45 HSPs)
chr2 (17-399)||(26715931-26716314)
chr2 (18-399)||(27506659-27507041)
chr2 (18-384)||(9045848-9046213)
chr2 (21-399)||(10762488-10762865)
chr2 (18-401)||(24410234-24410623)
chr2 (18-275)||(29939781-29940037)
chr2 (18-252)||(4505844-4506078)
chr2 (21-241)||(6964968-6965186)
chr2 (16-252)||(12337363-12337600)
chr2 (17-252)||(3155167-3155402)
chr2 (18-252)||(8906996-8907231)
chr2 (197-379)||(8327488-8327671)
chr2 (18-219)||(7162767-7162967)
chr2 (22-176)||(40636164-40636317)
chr2 (18-219)||(3952989-3953188)
chr2 (21-186)||(34693991-34694155)
chr2 (21-186)||(34716403-34716567)
chr2 (99-201)||(16097009-16097111)
chr2 (99-200)||(24035544-24035645)
chr2 (24-176)||(5952642-5952791)
chr2 (99-201)||(13800543-13800646)
chr2 (101-201)||(38400799-38400899)
chr2 (99-201)||(12134039-12134141)
chr2 (99-201)||(21665699-21665801)
chr2 (99-201)||(28425709-28425811)
chr2 (18-146)||(8327674-8327801)
chr2 (99-201)||(7742132-7742235)
chr2 (18-131)||(1396617-1396730)
chr2 (100-179)||(42029168-42029247)
chr2 (100-201)||(11912757-11912858)
chr2 (100-201)||(16227368-16227469)
chr2 (133-201)||(37182671-37182739)
chr2 (128-196)||(22727530-22727598)
chr2 (205-250)||(12134169-12134214)
chr2 (203-250)||(24035672-24035719)
chr2 (203-250)||(29694312-29694359)
chr2 (335-384)||(4505695-4505744)
chr2 (99-139)||(22727456-22727496)
chr2 (333-384)||(3952915-3952966)
chr2 (203-250)||(37182598-37182645)
chr2 (203-250)||(38400726-38400773)
chr2 (335-384)||(3155019-3155068)
chr2 (353-390)||(5952949-5952986)
chr2 (335-384)||(6964808-6964857)
chr2 (205-250)||(11912887-11912932)
[»] chr5 (52 HSPs)
chr5 (18-384)||(16198709-16199076)
chr5 (18-400)||(38869279-38869660)
chr5 (18-381)||(9364113-9364476)
chr5 (18-384)||(16799240-16799606)
chr5 (18-399)||(27923885-27924267)
chr5 (17-399)||(7670728-7671119)
chr5 (104-399)||(40389537-40389831)
chr5 (19-343)||(28822253-28822583)
chr5 (18-275)||(27078939-27079197)
chr5 (26-252)||(34756289-34756515)
chr5 (18-272)||(16591990-16592243)
chr5 (21-275)||(30854258-30854511)
chr5 (22-219)||(19523183-19523380)
chr5 (18-219)||(36187795-36187995)
chr5 (23-219)||(2274874-2275070)
chr5 (18-219)||(15480006-15480205)
chr5 (18-197)||(22986473-22986652)
chr5 (18-198)||(31194528-31194706)
chr5 (99-201)||(23284058-23284160)
chr5 (32-181)||(7338021-7338170)
chr5 (18-198)||(31881348-31881528)
chr5 (99-200)||(36868872-36868973)
chr5 (100-201)||(14318382-14318483)
chr5 (99-199)||(2024638-2024738)
chr5 (107-201)||(2530901-2530995)
chr5 (99-201)||(34425905-34426007)
chr5 (107-199)||(26718953-26719045)
chr5 (107-199)||(26988697-26988789)
chr5 (107-194)||(10543682-10543769)
chr5 (99-201)||(1366522-1366624)
chr5 (99-201)||(33037782-33037884)
chr5 (100-201)||(2412090-2412191)
chr5 (107-202)||(24395740-24395835)
chr5 (99-200)||(10407464-10407565)
chr5 (99-201)||(11242314-11242416)
chr5 (101-191)||(22648734-22648824)
chr5 (99-197)||(40794323-40794421)
chr5 (18-87)||(23283943-23284012)
chr5 (100-201)||(41911614-41911715)
chr5 (26-83)||(40389461-40389518)
chr5 (122-201)||(15639645-15639724)
chr5 (106-190)||(17344969-17345053)
chr5 (99-146)||(606211-606258)
chr5 (205-250)||(15639575-15639620)
chr5 (205-250)||(34425832-34425877)
chr5 (333-384)||(15480228-15480279)
chr5 (333-384)||(19523109-19523160)
chr5 (204-243)||(22648860-22648899)
chr5 (208-250)||(11242447-11242489)
chr5 (205-250)||(2024766-2024811)
chr5 (335-384)||(34756615-34756664)
chr5 (99-140)||(35080766-35080807)
[»] chr4 (71 HSPs)
chr4 (18-384)||(32128408-32128774)
chr4 (18-403)||(2790659-2791044)
chr4 (18-381)||(34027407-34027768)
chr4 (18-399)||(19498313-19498691)
chr4 (17-384)||(16844843-16845211)
chr4 (18-384)||(37777140-37777509)
chr4 (17-396)||(40089328-40089715)
chr4 (18-382)||(16882313-16882675)
chr4 (18-396)||(54083160-54083541)
chr4 (29-318)||(43455460-43455746)
chr4 (99-384)||(24969258-24969536)
chr4 (24-399)||(38352189-38352554)
chr4 (18-268)||(34768492-34768741)
chr4 (22-275)||(47128920-47129172)
chr4 (17-214)||(54780771-54780969)
chr4 (18-275)||(10978833-10979092)
chr4 (17-219)||(32915374-32915576)
chr4 (32-252)||(38209522-38209742)
chr4 (18-275)||(48209173-48209436)
chr4 (32-275)||(35465040-35465281)
chr4 (21-275)||(35779248-35779499)
chr4 (17-219)||(37514648-37514849)
chr4 (18-219)||(5128758-5128960)
chr4 (17-275)||(10428115-10428379)
chr4 (109-275)||(13460140-13460306)
chr4 (22-219)||(1105521-1105717)
chr4 (18-252)||(55255225-55255447)
chr4 (18-176)||(17679432-17679589)
chr4 (149-275)||(23509846-23509972)
chr4 (18-181)||(16922245-16922409)
chr4 (99-201)||(52468293-52468395)
chr4 (120-201)||(4167910-4167991)
chr4 (34-180)||(51964736-51964884)
chr4 (99-201)||(24396941-24397043)
chr4 (99-193)||(51691913-51692009)
chr4 (106-201)||(27112037-27112132)
chr4 (106-197)||(36118463-36118554)
chr4 (106-196)||(36178684-36178774)
chr4 (108-201)||(37744916-37745010)
chr4 (99-179)||(39655252-39655332)
chr4 (99-201)||(10041998-10042100)
chr4 (106-201)||(2135326-2135421)
chr4 (18-164)||(9578575-9578728)
chr4 (99-201)||(39329390-39329492)
chr4 (18-87)||(24969717-24969786)
chr4 (113-197)||(40217243-40217327)
chr4 (34-154)||(23508443-23508564)
chr4 (99-194)||(36362869-36362964)
chr4 (114-179)||(29425187-29425252)
chr4 (106-201)||(45656182-45656277)
chr4 (325-383)||(35463958-35464016)
chr4 (204-252)||(36118584-36118632)
chr4 (203-250)||(37746847-37746894)
chr4 (109-202)||(15735101-15735189)
chr4 (351-399)||(54779441-54779490)
chr4 (206-250)||(2135447-2135491)
chr4 (99-139)||(30507120-30507160)
chr4 (335-387)||(38209842-38209894)
chr4 (333-384)||(1105447-1105498)
chr4 (313-384)||(10431421-10431492)
chr4 (100-139)||(24614022-24614061)
chr4 (309-384)||(35780532-35780606)
chr4 (203-250)||(39329518-39329565)
chr4 (348-390)||(9579483-9579525)
chr4 (348-390)||(9585178-9585220)
chr4 (204-250)||(15735030-15735076)
chr4 (204-250)||(30507199-30507245)
chr4 (334-384)||(45560704-45560754)
chr4 (205-250)||(36178607-36178652)
chr4 (205-250)||(40217164-40217209)
chr4 (335-384)||(55255096-55255145)
[»] chr7 (45 HSPs)
chr7 (18-399)||(47984885-47985268)
chr7 (17-399)||(20091196-20091579)
chr7 (17-400)||(10329326-10329710)
chr7 (18-400)||(19691896-19692279)
chr7 (18-384)||(24525599-24525968)
chr7 (18-400)||(38414793-38415175)
chr7 (18-384)||(23550988-23551355)
chr7 (18-384)||(48983756-48984127)
chr7 (20-349)||(8239539-8239869)
chr7 (21-268)||(8171460-8171706)
chr7 (18-239)||(29077184-29077404)
chr7 (18-252)||(18776683-18776917)
chr7 (16-265)||(25010371-25010613)
chr7 (18-219)||(12596207-12596405)
chr7 (99-219)||(10955468-10955588)
chr7 (18-181)||(26254015-26254178)
chr7 (18-198)||(28749715-28749895)
chr7 (100-199)||(9021799-9021898)
chr7 (100-180)||(33162338-33162418)
chr7 (296-398)||(25010254-25010356)
chr7 (99-201)||(2611260-2611362)
chr7 (107-199)||(23859077-23859169)
chr7 (99-201)||(7398453-7398555)
chr7 (100-191)||(6765680-6765771)
chr7 (107-201)||(36891580-36891674)
chr7 (99-191)||(23744808-23744900)
chr7 (107-201)||(12981328-12981422)
chr7 (115-202)||(23020498-23020584)
chr7 (99-201)||(27237421-27237523)
chr7 (101-199)||(36902924-36903022)
chr7 (107-198)||(20153206-20153297)
chr7 (99-201)||(12419493-12419595)
chr7 (100-186)||(21763586-21763672)
chr7 (106-201)||(18201139-18201234)
chr7 (32-87)||(40357311-40357366)
chr7 (204-250)||(17800348-17800394)
chr7 (123-201)||(38971255-38971333)
chr7 (203-250)||(23859002-23859049)
chr7 (204-250)||(7398380-7398426)
chr7 (18-84)||(10955605-10955671)
chr7 (114-197)||(9014782-9014858)
chr7 (148-200)||(17800268-17800320)
chr7 (334-384)||(28749597-28749647)
chr7 (205-250)||(26917810-26917855)
chr7 (205-250)||(27237551-27237596)
[»] chr1 (51 HSPs)
chr1 (18-400)||(9172940-9173322)
chr1 (16-387)||(19955544-19955914)
chr1 (18-384)||(1366797-1367161)
chr1 (18-399)||(17168769-17169151)
chr1 (18-399)||(40501707-40502090)
chr1 (21-399)||(13913401-13913782)
chr1 (99-384)||(27559463-27559752)
chr1 (18-402)||(51607358-51607742)
chr1 (18-275)||(23185366-23185622)
chr1 (106-400)||(44895466-44895754)
chr1 (18-251)||(9180922-9181155)
chr1 (18-275)||(4971536-4971792)
chr1 (18-252)||(44655703-44655936)
chr1 (16-268)||(5316626-5316877)
chr1 (17-235)||(5027528-5027747)
chr1 (18-219)||(14146295-14146495)
chr1 (21-275)||(50881369-50881621)
chr1 (18-219)||(6771786-6771989)
chr1 (16-219)||(3406413-3406616)
chr1 (16-219)||(3440204-3440407)
chr1 (24-219)||(16140050-16140244)
chr1 (18-252)||(27906646-27906868)
chr1 (35-219)||(41697072-41697255)
chr1 (17-193)||(21740851-21741029)
chr1 (18-179)||(22865378-22865538)
chr1 (18-191)||(6889634-6889805)
chr1 (18-191)||(6891480-6891651)
chr1 (100-201)||(38547035-38547136)
chr1 (99-201)||(39134720-39134823)
chr1 (99-201)||(45758507-45758609)
chr1 (99-200)||(5533326-5533428)
chr1 (99-197)||(38853539-38853637)
chr1 (107-201)||(43235774-43235870)
chr1 (100-197)||(26803965-26804059)
chr1 (106-197)||(33170776-33170867)
chr1 (107-189)||(35392295-35392376)
chr1 (99-201)||(50146309-50146411)
chr1 (100-201)||(6221691-6221791)
chr1 (99-199)||(10925951-10926052)
chr1 (99-162)||(17322621-17322684)
chr1 (32-87)||(34247153-34247208)
chr1 (309-384)||(23181727-23181801)
chr1 (203-250)||(39134849-39134896)
chr1 (199-250)||(5533251-5533302)
chr1 (333-384)||(14146221-14146272)
chr1 (351-384)||(5027991-5028024)
chr1 (205-250)||(26803889-26803934)
chr1 (335-384)||(27906949-27906998)
chr1 (203-248)||(38547162-38547207)
chr1 (335-384)||(44655555-44655604)
chr1 (164-193)||(52127521-52127550)
[»] scaffold0039 (2 HSPs)
scaffold0039 (17-282)||(106459-106724)
scaffold0039 (325-399)||(106379-106454)
[»] scaffold0070 (1 HSPs)
scaffold0070 (18-275)||(1271-1527)
[»] scaffold1590 (1 HSPs)
scaffold1590 (99-201)||(257-359)
[»] scaffold0012 (1 HSPs)
scaffold0012 (107-201)||(206496-206590)
[»] scaffold0018 (1 HSPs)
scaffold0018 (106-201)||(173516-173611)
[»] scaffold0027 (1 HSPs)
scaffold0027 (296-401)||(4147-4252)
[»] scaffold0097 (1 HSPs)
scaffold0097 (106-201)||(38927-39022)
[»] scaffold0007 (2 HSPs)
scaffold0007 (99-202)||(230858-230961)
scaffold0007 (203-250)||(230986-231033)
[»] scaffold1320 (2 HSPs)
scaffold1320 (107-201)||(1356-1450)
scaffold1320 (205-250)||(1285-1330)
[»] scaffold0182 (1 HSPs)
scaffold0182 (100-200)||(23993-24093)
[»] scaffold0229 (1 HSPs)
scaffold0229 (110-284)||(23803-23976)
[»] scaffold0001 (2 HSPs)
scaffold0001 (18-157)||(183106-183244)
scaffold0001 (153-219)||(181903-181969)
[»] scaffold0022 (4 HSPs)
scaffold0022 (99-197)||(40091-40191)
scaffold0022 (99-197)||(138151-138251)
scaffold0022 (204-250)||(40012-40058)
scaffold0022 (204-250)||(138072-138118)
[»] scaffold0003 (1 HSPs)
scaffold0003 (126-179)||(351360-351413)
[»] scaffold0227 (2 HSPs)
scaffold0227 (135-197)||(16033-16095)
scaffold0227 (100-145)||(16123-16168)


Alignment Details
Target: chr6 (Bit Score: 257; Significance: 1e-142; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 257; E-Value: 1e-142
Query Start/End: Original strand, 18 - 384
Target Start/End: Original strand, 27788608 - 27788972
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||           ||||||||||| |||||||    
T  27788608 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg--tatttttttaaaagagcaattttctatt 27788705  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27788706 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 27788805  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtg 317  Q
    ||||||||  |||||||| |||||||||||||||| ||||| ||||||||||||||||| ||||||||||        ||||||||||||||||||||||    
T  27788806 aagcaagatgacctaattttaataggcctaaaagactaaaataaggggacagaaaatggttgggggtattaaaaaaaattggagggcagtaatactagtg 27788905  T
Q  318 ggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27788906 ggtattaaaaaaaaatttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 27788972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 18 - 401
Target Start/End: Original strand, 20711638 - 20712020
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||| ||||||| ||||||||||||||| | |||||||||||||| ||| |||| ||||||||||||||           |||||||||||||||||||    
T  20711638 cagggacgtccctgagaattcggaggctcggttctgggaatgaaaagaggtcagtcataaaatcaaaacgtatttttttttaaaagagcaatgttctatt 20711737  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||  ||    
T  20711738 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccatctaacattaa 20711837  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtg 317  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||| ||||||||||||||    
T  20711838 aagcaagatgacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt--aaaaaattggaggacagtaatactagtg 20711935  T
Q  318 ggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacc-cctcagggtcgggcctgat 401  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  20711936 ggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcacctcctcagggccgggcctgat 20712020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 17 - 401
Target Start/End: Complemental strand, 17354143 - 17353757
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctat 116  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||| ||| |||||||||||||||||||           |||| |||||||||||||    
T  17354143 acagggccgtccctaagaattcggaggctcgactcttggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaaaaagcaatgttctat 17354044  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||    
T  17354043 ttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgatgaacccccacctaacacca 17353944  T
Q  217 aaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt--nnnnnnnnttggagggcagtaatacta 314  Q
    |||||||||| ||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||          || |||||||||| |||||    
T  17353943 aaagcaagaggacctaattctaatagacctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaaattagagggcagtagtacta 17353844  T
Q  315 gtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctgat 401  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  17353843 gtgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggccgggcctgat 17353757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 28 - 400
Target Start/End: Complemental strand, 28075964 - 28075587
Alignment:
Q  28 cctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnna---aaagagcaatgttctatttatattt 124  Q
    |||||||||| |||||||| |||||||||||||||| |||||||||| ||||||||||||               ||| |||||||||||||||||||||    
T  28075964 cctaagaatttggaggctcggctctgggaatgaaaagaggccagtgaaaaaatcaaaacgtattttttttattttaaaaagcaatgttctatttatattt 28075865  T
Q  125 tttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaagcaag 224  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  28075864 tttaaaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaaacaag 28075765  T
Q  225 agaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcagtaatactagtgggtatt 323  Q
    || ||||||||||||||||| ||||||  |||||||||| |||||||||||||||||||||||         ||||||| ||||| ||||||||||||||    
T  28075764 aggacctaattctaataggcataaaaggctaaaacaaggagacagaaaatggctgggggtattaaaaaaaaattggaggacagtagtactagtgggtatt 28075665  T
Q  324 aaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctga 400  Q
    ||||| ||| |||| |||||||||||| ||| ||| ||||||||||||||||||||| |||||||| | |||||||||    
T  28075664 aaaaaaaaaattgaagcccatgactgaaggaagcctagctctgttgagctgtttgcaccccctcagagccgggcctga 28075587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 180; E-Value: 9e-97
Query Start/End: Original strand, 17 - 401
Target Start/End: Original strand, 235142 - 235527
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctat 116  Q
    ||||| || |||||||||||||||||| || ||| || ||||||||| || ||||||||||||||||||||           |||| ||||||| |||||    
T  235142 acaggaccatccctaagaattcggaggttcggctatgagaatgaaaagagaccagtgataaaatcaaaacgtatttttttttaaaa-agcaatgatctat 235240  T
Q  117 ttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacac 214  Q
    |||||||||||||||||||||||||||||||||  ||||||| | |||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||    
T  235241 ttatattttttaaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgagaaacccccacc-aacac 235339  T
Q  215 caaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcagtaatact 313  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||         ||||||||||||| ||||    
T  235340 caaaagcaagaggacctaattctaataggcctaaaagactaaaacaa-gggacagaaaatggttgagggtattaaaaaaaatttggagggcagtagtact 235438  T
Q  314 agtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctgat 401  Q
    ||||||||||||||| ||| || ||| |||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  235439 agtgggtattaaaaaaaaaattaaggtccatgactgagggaggcccagctctgttaagctgtttgcaccccctcagggacgggcctgat 235527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 13727317 - 13727551
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||            |||||||||||||||||||    
T  13727317 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatt 13727416  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  13727417 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 13727516  T
Q  218 aagcaagagaacctaattctaataggcctaaaaga 252  Q
    || |||||| | ||||||||||||  |||||||||    
T  13727517 aatcaagaggaactaattctaataatcctaaaaga 13727551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 21280733 - 21280499
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||            |||||||||||||||||||    
T  21280733 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatt 21280634  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  21280633 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaactcccacctaacaccaa 21280534  T
Q  218 aagcaagagaacctaattctaataggcctaaaaga 252  Q
    || |||||| | ||||||||||||  |||||||||    
T  21280533 aatcaagaggaactaattctaataatcctaaaaga 21280499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 22 - 360
Target Start/End: Complemental strand, 34398039 - 34397703
Alignment:
Q  22 gccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttata 121  Q
    ||||||||||||||||||||| |||   ||||||| | |||| || ||||||||||||||||||||           |||||||||||||||||||||||    
T  34398039 gccgtccctaagaattcggagactcgcatctggga-taaaaaaagaccagtgataaaatcaaaacg-tattttttttaaaagagcaatgttctatttata 34397942  T
Q  122 ttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaagc 221  Q
    |||||||||||||||||| |||||| ||||||||||||||||||| |||||| |||||||||| |||| |||||||||||  |||| |||||||||||||    
T  34397941 ttttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgaggaacctccacttaacaccaaaagc 34397842  T
Q  222 aagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtgggta 321  Q
    ||||  ||||||||||||||||||||||||  ||||||||| ||||||||||||| ||||||||||        ||| ||||||||| ||||||||||||    
T  34397841 aagaagacctaattctaataggcctaaaaggctaaaacaagaggacagaaaatggttgggggtattaaaaaaaattgaagggcagtattactagtgggta 34397742  T
Q  322 ttaaaaacaaacttgagg-cccatgactgagggaggccca 360  Q
    ||||||| ||| |||||| |||||| ||| ||||||||||    
T  34397741 ttaaaaa-aaaattgaggccccatggctgggggaggccca 34397703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 21479683 - 21479448
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaatgttctat 116  Q
    |||||||||| || |||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||  |          ||||||||||||||||||    
T  21479683 cagggccgtctctgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagcaatgttctat 21479584  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  21479583 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 21479484  T
Q  217 aaagcaagagaacctaattctaataggcctaaaaga 252  Q
    ||| |||||| | ||||||||||||  |||||||||    
T  21479483 aaatcaagaggaactaattctaataatcctaaaaga 21479448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 104 - 384
Target Start/End: Complemental strand, 19987253 - 19986982
Alignment:
Q  104 agcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactc 203  Q
    ||||||| |||||||||||||||| |||||||||||||| ||| ||          ||||||||||| |||||||||  |||| ||||||| |||||  |    
T  19987253 agcaatgatctatttatatttttttaaagataaatataaagtgacg----------gtacacccaaatgtgaaaatggttaccatatacataaggaatcc 19987164  T
Q  204 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagg 302  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||         ||| |||    
T  19987163 ccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaaggggacggaaaatggctgggggtattaaaaaaaaattgaagg 19987064  T
Q  303 gcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    |||||| ||||||||||||||||||| ||| ||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  19987063 gcagtagtactagtgggtattaaaaaaaaatttgaggcccataattgagggaggcccagctctgttgagctgtttgcacccc 19986982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 33774305 - 33774071
Alignment:
Q  19 agggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaatgttctatt 117  Q
    |||||| ||| | ||||||||||||||| ||||||  |||||||| |||||||| |||||||||||||  |          ||||||| |||||||||||    
T  33774305 agggccatccttgagaattcggaggctcggctctgaaaatgaaaagaggccagtaataaaatcaaaacataatttttttttaaaagagtaatgttctatt 33774206  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  33774205 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 33774106  T
Q  218 aagcaagagaacctaattctaataggcctaaaaga 252  Q
    || |||||| | ||||||||||||  |||||||||    
T  33774105 aatcaagaggaactaattctaataatcctaaaaga 33774071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 99 - 275
Target Start/End: Original strand, 19737691 - 19737867
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  19737691 aaaagagcaatgttctatttatatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgagg 19737790  T
Q  199 aactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    ||| ||||||||||||||||| |||||| | |||||| |||||  ||||||||  ||||||||| ||||||||||||    
T  19737791 aacccccacctaacaccaaaatcaagaggaactaattttaataatcctaaaaggctaaaacaagaggacagaaaatg 19737867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 17 - 219
Target Start/End: Original strand, 24710913 - 24711118
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnna---aaagagcaatgttc 113  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||| |||  ||||||||||||||||||               ||||||  ||||||    
T  24710913 acagggccgtccctgagaattcggaggctcagctcagggaatgaaaagaggttagtgataaaatcaaaacgtttttttttttttttaaagagtgatgttc 24711012  T
Q  114 tatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaaca 213  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  24711013 tatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 24711112  T
Q  214 ccaaaa 219  Q
    ||||||    
T  24711113 ccaaaa 24711118  T

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Target: chr6; HSP #14
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 30832443 - 30832643
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||| |||||||||||||||||||||||           ||||| || ||||||||||    
T  30832443 cagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg-tatttttttaaaaagcgcgatgttctatt 30832541  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    || ||||||||||| ||||||| ||| ||||||||||||| |||||||||| || |||||||||||||||||| |||||||||| |||||||||||||||    
T  30832542 tacattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgaggaacccccacctaacaccaa 30832641  T
Q  218 aa 219  Q
    ||    
T  30832642 aa 30832643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 27314097 - 27314259
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| | |||||||||||||  ||||||||||||||| |||||||||||||||||||||||           |||||||||||||||||||    
T  27314097 cagggccgtccctgaaaattcggaggctcgactctgggaatgaaaagaggccagtgataaaatcaaaacg-tattttttttaaaagagcaatgttctatt 27314195  T
Q  118 tatattttttaaaa-gataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatg 180  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||| || |||||||||||    
T  27314196 tatattttttaaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatg 27314259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 1155767 - 1155947
Alignment:
Q  20 gggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg--annnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| |||| |||||||| | ||| |||||||||| ||| ||||||||||||||||| |  |           ||||||||||||||||||    
T  1155767 gggccgtccctaaaaatttggaggctcggttctaggaatgaaaagaggtcagtgataaaatcaaaaagtaatttttttttttaaagagcaatgttctatt 1155866  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  1155867 tatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgagg 1155947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 106 - 201
Target Start/End: Original strand, 2477590 - 2477685
Alignment:
Q  106 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    |||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| ||| |||||||| |||||||||||||||||||||    
T  2477590 caatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaac 2477685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 106 - 201
Target Start/End: Complemental strand, 6159538 - 6159443
Alignment:
Q  106 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||  |||||||| |||| ||||||||||| || ||||||    
T  6159538 caatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggtggaaatcactaccgtatatataaggaac 6159443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 21183686 - 21183776
Alignment:
Q  111 ttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    ||||||||| ||||||||||||||||||| || ||  |||||||||| ||||||||||||| ||||||| |||||||||||||||||||||    
T  21183686 ttctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaac 21183776  T

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Target: chr6; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 20611889 - 20611795
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    ||||||||| ||| |||||||||| |||||||| |||||| ||||||||| ||  ||| |||||||||||||| |||||||||||||||||||||    
T  20611889 aatgttctacttaaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaac 20611795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 4037031 - 4036952
Alignment:
Q  123 tttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaact 202  Q
    ||||||| ||||||||| ||||||||||||||||  ||||||||||||||| || || ||||||||||| ||||||||||    
T  4037031 tttttaagagataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgaggaact 4036952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 100 - 185
Target Start/End: Complemental strand, 30121868 - 30121783
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactac 185  Q
    ||||| ||||||| |||||| ||||||||||| ||||||| |||||| | |||||||||| |||| |||||||||||||| |||||    
T  30121868 aaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaatcactac 30121783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 27994819 - 27994775
Alignment:
Q  156 tgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaa 200  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  27994819 tgcggtacactcaaaggtgaaaatcactaccgtatacatgaggaa 27994775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 333 - 387
Target Start/End: Original strand, 30832666 - 30832720
Alignment:
Q  333 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctca 387  Q
    ||||||||||||   |||||||||||||||||  |||||||||||||||||||||    
T  30832666 cttgaggcccatccttgagggaggcccagctcatttgagctgtttgcacccctca 30832720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 23070889 - 23070939
Alignment:
Q  334 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    |||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  23070889 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 23070939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 11081684 - 11081733
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||| || ||||||||| |||||  ||||||||||||||||||    
T  11081684 tgaggcccatgccttagggaggcctagctccattgagctgtttgcacccc 11081733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 13727650 - 13727699
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  13727650 tgaggcccatctttgagggaggcccagctcgtttgagctgtttgcacccc 13727699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 323 - 384
Target Start/End: Original strand, 19741212 - 19741273
Alignment:
Q  323 taaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    |||||| ||| |||||| ||||   |||||||||||||||||  ||||||||||||||||||    
T  19741212 taaaaaaaaaattgaggtccatccttgagggaggcccagctcgtttgagctgtttgcacccc 19741273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 18 - 384
Target Start/End: Original strand, 23798179 - 23798545
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||| ||| || ||||||||||||||||            ||||||||||||||||||    
T  23798179 cagggccgtccctaagaattcggaggctcggctctgggaacgaaaagaggtcaatgataaaatcaaaacgtatattttttttaaagagcaatgttctatt 23798278  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  23798279 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 23798378  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtg 317  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||        ||||||||||||||||||||||    
T  23798379 aagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggttgggggtattaaaaacaattggagggcagtaatactagtg 23798478  T
Q  318 ggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  23798479 ggtattaaaaaaaaatttgaggcccatgactgagggaggcccagctttgttgagctgttcgcacccc 23798545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 18 - 401
Target Start/End: Complemental strand, 42600967 - 42600582
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||| ||| |||||||||||||||||||           |||| ||||||| ||||||    
T  42600967 cagggccgtccctaagaattcggaggctcggctctgaaaatgaaaagaggtcagtgataaaatcaaaacgtttttttttttaaaaaagcaatgatctatt 42600868  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42600867 tatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 42600768  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcagtaatactagt 316  Q
    ||||||||  ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||         ||||||||||||| |||||||    
T  42600767 aagcaagaagacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctggggttattaaattttttttggagggcagtagtactagt 42600668  T
Q  317 gggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctgat 401  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  42600667 gggtattaaaaataaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggacgggcctgat 42600582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 18 - 384
Target Start/End: Original strand, 23606548 - 23606905
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||           |||||||||||||||||||    
T  23606548 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacg-tattttttttaaaagagcaatgttctatt 23606646  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  23606647 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaa 23606746  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtg 317  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||        |||||||||||        ||||||||||||| ||||||||    
T  23606747 aagcaagaggacctaattctaataggcctaaaagactaaaacaaggggaca--------ctgggggtattaaaaaaaattggagggcagtattactagtg 23606838  T
Q  318 ggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||  ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23606839 ggtattaaaagaaaatttgaggcccatgactgagggaggcccaactctgttgagctgtttgcacccc 23606905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 17 - 384
Target Start/End: Complemental strand, 10917576 - 10917210
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctat 116  Q
    ||||||| |||| ||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||           |||| | ||||| |||||    
T  10917576 acagggctgtccttaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaa-caatgatctat 10917478  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  10917477 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgaggaacccccacctaacacca 10917378  T
Q  217 aaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcagtaatactag 315  Q
    |||||||||  ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||         ||| || |||||| ||||||    
T  10917377 aaagcaagatgacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaattttttttgaagagcagtagtactag 10917278  T
Q  316 tgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||||| ||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  10917277 tgggtattaaaaa-aaaattgtggcccatgagtgagggaggcccagctctgttgagctgtttgcacccc 10917210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 45476001 - 45475745
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||| ||||| ||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||           |||||||||||||||||||    
T  45476001 cagggccatccctgagaattcggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaacg-tattttttttaaaagagcaatgttctatt 45475903  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  45475902 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 45475803  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    ||||||||| | ||||||||||||||||||||||  ||||||||| ||||||||||||    
T  45475802 aagcaagaggaactaattctaataggcctaaaaggctaaaacaagaggacagaaaatg 45475745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 21 - 275
Target Start/End: Original strand, 13534609 - 13534861
Alignment:
Q  21 ggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttat 120  Q
    |||||||||| | ||||||||||||| |||||||||||||||| |||||||||||||||||||||||           ||||||||||||||||||||||    
T  13534609 ggccgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg-tattttttttaaaagagcaatgttctatttat 13534707  T
Q  121 attttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaag 220  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  13534708 attttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaat 13534806  T
Q  221 caagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    |||||||| ||||||||||||  ||||||||  ||||||||| ||||||||||||    
T  13534807 caagagaaactaattctaataatcctaaaaggctaaaacaagaggacagaaaatg 13534861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 21 - 275
Target Start/End: Original strand, 13624149 - 13624401
Alignment:
Q  21 ggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttat 120  Q
    |||||||||| | ||||||||||||| |||||||||||||||| |||||||||||||||||||||||           ||||||||||||||||||||||    
T  13624149 ggccgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg-tattttttttaaaagagcaatgttctatttat 13624247  T
Q  121 attttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaag 220  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  13624248 attttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaat 13624346  T
Q  221 caagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    |||||||| ||||||||||||  ||||||||  ||||||||| ||||||||||||    
T  13624347 caagagaaactaattctaataatcctaaaaggctaaaacaagaggacagaaaatg 13624401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 2952137 - 2952373
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg--annnnnnnnnnaaaagagcaatgttcta 115  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||   |          |||||||||||||||||    
T  2952137 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaaagagcaatgttcta 2952236  T
Q  116 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacc 215  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||    
T  2952237 tttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacacc 2952336  T
Q  216 aaaagcaagagaacctaattctaataggcctaaaaga 252  Q
    |||| |||||| | ||||||||||||  |||||||||    
T  2952337 aaaatcaagaggaactaattctaataatcctaaaaga 2952373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 21 - 252
Target Start/End: Complemental strand, 30883512 - 30883280
Alignment:
Q  21 ggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaatgttctattta 119  Q
    |||||||||| ||||||| ||||||| ||||||| |||||||| ||||||||||||||||||||||  |          |||||||||||||||||||||    
T  30883512 ggccgtccctgagaattcagaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagcaatgttctattta 30883413  T
Q  120 tattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaa 219  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30883412 tattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 30883313  T
Q  220 gcaagagaacctaattctaataggcctaaaaga 252  Q
     |||||| | ||||||||||||  |||||||||    
T  30883312 tcaagaggaactaattctaataatcctaaaaga 30883280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 41879364 - 41879109
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||| |||  ||||||||||| ||||||           |||||| ||||||||||||    
T  41879364 cagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggttagtgataaaattaaaacg--tatttttttaaaagaacaatgttctatt 41879267  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||| |||||||||||||||    
T  41879266 tatattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgagaaacccccacctaacaccaa 41879167  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    || |||||| | ||||||||||||  ||||||||  ||||||||| ||||||||||||    
T  41879166 aatcaagaggaactaattctaataatcctaaaaggctaaaacaagaggacagaaaatg 41879109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 3048435 - 3048669
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    |||||||||| || ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||            ||||||||||| | |||||    
T  3048435 cagggccgtctctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatatactatt 3048534  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| | || ||||||||||||||||||||| ||||||| | |||||||||||||    
T  3048535 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtatacacgaggaaccctcacctaacaccaa 3048634  T
Q  218 aagcaagagaacctaattctaataggcctaaaaga 252  Q
    || |||||| | ||||||||||||  |||||||||    
T  3048635 aatcaagaggaactaattctaataatcctaaaaga 3048669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 37430076 - 37430277
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||           |||||||| ||||||||||    
T  37430076 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtttttttttttaaaagagcgatgttctatt 37430175  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||| | |||| ||||||||||||||||||||||||||| | ||| |||||||||    
T  37430176 tatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgaggaaccctcacgtaacaccaa 37430275  T
Q  218 aa 219  Q
    ||    
T  37430276 aa 37430277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 100 - 252
Target Start/End: Original strand, 5860744 - 5860896
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 199  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |    
T  5860744 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaa 5860843  T
Q  200 actcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 252  Q
    || || |||||||||||||| |||||| | ||||||||||||  |||||||||    
T  5860844 accccaacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 5860896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 7944521 - 7944623
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| ||||||| |||||| ||||||||||| ||||||| |||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  7944521 aaaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgagg 7944620  T
Q  199 aac 201  Q
    |||    
T  7944621 aac 7944623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 8103008 - 8102914
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    |||||| |||||| ||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||| | |||||||||||||||||||    
T  8103008 aatgttatatttaaattttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaac 8102914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 15167414 - 15167516
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| |||||||||||||||||||||| |||  ||||||||||| |||||||||| |||||||| |||| |||||||||||||    
T  15167414 aaaagaacaatgttctatttaaattttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 15167513  T
Q  199 aac 201  Q
    |||    
T  15167514 aac 15167516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 99 - 197
Target Start/End: Complemental strand, 11290288 - 11290190
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    |||||| ||||||| |||||| ||||||||||||||||||| |||||| ||||||||||  |||||| ||||||||||||| |||||||||||||||||    
T  11290288 aaaagaacaatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgag 11290190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 15078854 - 15078760
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||| |||| ||||||||||||||||    
T  15078854 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaac 15078760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 39332405 - 39332506
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 199  Q
    ||||| ||||||||||||||  ||||| |||||||||||| |||||| | |||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  39332405 aaagaacaatgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgagga 39332504  T
Q  200 ac 201  Q
    ||    
T  39332505 ac 39332506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 5942777 - 5942698
Alignment:
Q  122 ttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    |||||||||||||||||| ||| || ||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  5942777 ttttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaac 5942698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 5973106 - 5973208
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||| ||||||||||  ||||||||| || ||||||| | ||||||||||| ||||    
T  5973106 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtatacacgagg 5973205  T
Q  199 aac 201  Q
    |||    
T  5973206 aac 5973208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 108 - 201
Target Start/End: Complemental strand, 5721654 - 5721561
Alignment:
Q  108 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    ||||||||||||  |||||||||||||||||| |||||||| ||||||  ||||||||||||| |||||||| |||||||||||| ||||||||    
T  5721654 atgttctatttaatttttttaaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaac 5721561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 30674403 - 30674482
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaat 179  Q
    ||||| |||||||||||||| || ||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||    
T  30674403 aaagaacaatgttctatttaaatgttttaaaagataaatataaggtgtcgtatatatgcgatacactcaaaggtgaaaat 30674482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 41677172 - 41677275
Alignment:
Q  99 aaaagagcaatgttctatttatatttt-ttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    |||||| |||||||||||||| ||||| |||||||||||||| ||| || |||||||||||| |||| | |||||||||||| ||||| |||||||||||    
T  41677172 aaaagaacaatgttctatttaaatttttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgag 41677271  T
Q  198 gaac 201  Q
    ||||    
T  41677272 gaac 41677275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 99 - 197
Target Start/End: Original strand, 34789861 - 34789959
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    |||||| | |||||||||||| || | |||||||||||||| ||| || ||||||||||  |||||||||||||||||||| |||||||||||||||||    
T  34789861 aaaagaacgatgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgag 34789959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 99 - 194
Target Start/End: Complemental strand, 8646309 - 8646215
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacat 194  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||  |||||||||||  ||||| |||| |||||||| ||||||||||||||    
T  8646309 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtatcgtatatatgc-atacacgcaaatgtgaaaatcactaccgtatacat 8646215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 14509983 - 14510079
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtg-aaaatgactaccgtatacatgag 197  Q
    ||||| |||||||| ||||| ||||||||||||| |||||||||||| ||||||||  ||||||||||||| ||| ||||| |||||||||||||||||    
T  14509983 aaagaacaatgttcaatttaaattttttaaaagacaaatataaggtgtcgtatata--cggtacacccaaatgtgaaaaatcactaccgtatacatgag 14510079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 25561502 - 25561594
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    ||||||||||||| || ||||||| |||||||| ||||||||||||||||||| || ||||||| |||||||| ||| |||||||||||||||||    
T  25561502 aatgttctatttaaatcttttaaa-gataaatacaaggtgccgtatatatgcgata-acccaaatgtgaaaatcactgccgtatacatgaggaac 25561594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 20003728 - 20003797
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg 87  Q
    ||||||||||||| |||||| |||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  20003728 cagggccgtccctgagaatttggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaacg 20003797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 23941097 - 23941170
Alignment:
Q  106 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaat 179  Q
    ||||||| |||||| ||||||||||||||||||| |||||| | |||||| ||| ||||||||||| |||||||    
T  23941097 caatgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacccaaagatgaaaat 23941170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 199
Target Start/End: Original strand, 34048705 - 34048806
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgc--ggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    ||||| |||||||||||||| |  |||||||||||||||| || ||| |||||||||    | ||||||||||| ||||||| ||||| |||||||||||    
T  34048705 aaagaacaatgttctatttaaacattttaaaagataaatacaatgtgtcgtatatatatatgatacacccaaagatgaaaatcactactgtatacatgag 34048804  T
Q  198 ga 199  Q
    ||    
T  34048805 ga 34048806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 25561635 - 25561680
Alignment:
Q  205 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||    
T  25561635 cacctaacaccaaaagcaagaggacccaattctaataggcctaaaa 25561680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 8102889 - 8102845
Alignment:
Q  204 ccacctaacaccaaaagcaagagaacctaattctaataggcctaa 248  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  8102889 ccacctaacaccaaaagcaagaggacccaattctaataggcctaa 8102845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 15167540 - 15167587
Alignment:
Q  203 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||||| ||||| ||| |||||||||||||||||||    
T  15167540 cccacctaacaccaaaagtaagaggacccaattctaataggcctaaaa 15167587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 41677300 - 41677347
Alignment:
Q  203 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||||    
T  41677300 cccacctaacaccaaaagcaagaggacccgattctaataggcctaaaa 41677347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 8646174 - 8646129
Alignment:
Q  205 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||||||||  ||||||||| |||||||||||||    
T  8646174 cacctaacaccaaaagcaagatgacctaattcgaataggcctaaaa 8646129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 9108596 - 9108551
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggt 145  Q
    ||||| |||||||||||||| ||||||||||||||||||| |||||    
T  9108596 aaagaacaatgttctatttaaattttttaaaagataaatacaaggt 9108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 30674507 - 30674551
Alignment:
Q  206 acctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    ||||||||||||||||||||||||| ||||| ||||| |||||||    
T  30674507 acctaacaccaaaagcaagagaacccaattcaaatagacctaaaa 30674551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 38009151 - 38009203
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgta 151  Q
    |||||| |||||||||||||| | |||||||||||||||||||| ||| ||||    
T  38009151 aaaagaacaatgttctatttaaaatttttaaaagataaatataacgtgtcgta 38009203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 7944649 - 7944696
Alignment:
Q  203 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||||||||||| ||  |||| ||||||||||||||    
T  7944649 cccacctaacaccaaaagcaagaggacacaattttaataggcctaaaa 7944696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 20003875 - 20003926
Alignment:
Q  333 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  20003875 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 20003926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 146
Target Start/End: Original strand, 34868184 - 34868223
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtg 146  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  34868184 aatgttctatttaaattttttaaaagataaatacaaggtg 34868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 384
Target Start/End: Complemental strand, 45472281 - 45472207
Alignment:
Q  309 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    |||||| ||||||| ||||| ||| |||||||||||   || ||| |||||||||| |||||||||||||||||||    
T  45472281 atactaatgggtataaaaaaaaaa-ttgaggcccatccttgggggtggcccagctcggttgagctgtttgcacccc 45472207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 5860674 - 5860728
Alignment:
Q  32 agaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaac 86  Q
    |||||| |||||||| ||||||| |||||||| ||| || |||||||||||||||    
T  5860674 agaatttggaggctcggctctggaaatgaaaagaggtcaatgataaaatcaaaac 5860728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 204 - 250
Target Start/End: Complemental strand, 11290159 - 11290113
Alignment:
Q  204 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||| ||||||||||| || ||| |||||||||||||||||||    
T  11290159 ccacctaataccaaaagcaacaggacccaattctaataggcctaaaa 11290113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 2952473 - 2952522
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  2952473 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 2952522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 3048774 - 3048823
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  3048774 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 3048823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 5860996 - 5861045
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  5860996 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 5861045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 15078734 - 15078689
Alignment:
Q  205 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||| ||||| ||| |||||||| ||||||||||    
T  15078734 cacctaacaccaaaagtaagaggacccaattctaacaggcctaaaa 15078689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 245; Significance: 1e-135; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 17 - 401
Target Start/End: Original strand, 43207156 - 43207542
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctat 116  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||| | ||||||           ||||||||||||||||||    
T  43207156 acagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaattaaaaacg-tattttttttaaaagagcaatgttctat 43207254  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43207255 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacatc-aaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 43207353  T
Q  217 aaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt---nnnnnnnnttggagggcagtaatact 313  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||           ||||||||||||||||||    
T  43207354 aaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattaaaaaaaaaaattggagggcagtaatact 43207453  T
Q  314 agtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctgat 401  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||    
T  43207454 agtgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcaggaccgggcctgat 43207542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 548 - 808
Target Start/End: Complemental strand, 26403527 - 26403268
Alignment:
Q  548 ttttatttccaccacacttagccctatggattaaaaattgtgattctctatgcttttttacttgccaacatactgttatattgctcacaactataagtaa 647  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  26403527 ttttatttccacctcacttagccctatggattaaaaattgtgattctctatgctttttaacttgccaacatactgttatgttgctcacaactataagtaa 26403428  T
Q  648 cataagtatacagtttgagcatcttaggatccattttttgtattgcttggtcaccaacactatcacttgtagttgcactaccaccattgatgcggttctt 747  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  26403427 cataagtatacagtttgagcatcttaggatccattttttgtgttgcttggtca-caacactatcacttgtagttgcactaccaccattgatgctgttctt 26403329  T
Q  748 cttaacatgaccaagatttgatttctctatattcatgttattgttgttgttgatgatgtcc 808  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26403328 cttaacatgaccaagatttgatttctctatattcatgttattgttgttgttgatgatgtcc 26403268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 22 - 400
Target Start/End: Complemental strand, 44708660 - 44708281
Alignment:
Q  22 gccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttata 121  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||           |||| || |||||||||||||||    
T  44708660 gccgtccctaagaattcggaggctcaactctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaa-agaaatgttctatttata 44708562  T
Q  122 ttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaagc 221  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44708561 ttttttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagc 44708462  T
Q  222 aagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcagtaatactagtgggt 320  Q
    ||||  ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||         |||||| |||||| ||||||||| |    
T  44708461 aagatgacctaattctaataggcctaaaaggctaaaacaaggggacataaaatggctgggggtattaaaaaaaaattggagagcagtagtactagtggat 44708362  T
Q  321 attaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctga 400  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  44708361 attaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagagccgggcctga 44708281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 18 - 399
Target Start/End: Original strand, 53506802 - 53507183
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaatgttctat 116  Q
    ||||||||||| |||||||||| |||||| |||||||||||||| | ||||||||||||||||||||||  |          |||| | |||||||||||    
T  53506802 cagggccgtcc-taagaattcgaaggctcggctctgggaatgaagagaggccagtgataaaatcaaaacatattttttttttaaaaaaacaatgttctat 53506900  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  53506901 ttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaacacca 53507000  T
Q  217 aaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagt 316  Q
    |||||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||        ||||||||||||| |||||||    
T  53507001 aaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacataaaatggttgggggtattaaaaaaaattggagggcagtagtactagt 53507100  T
Q  317 gggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 399  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  53507101 gggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggccgggcctg 53507183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 17 - 399
Target Start/End: Original strand, 34290553 - 34290940
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctat 116  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||| | | |||||||||||||||||||           |||| | |||||||||||    
T  34290553 acagggccgtccttaagaattcggaggctcggctctgggaatgaaaagaagtcagtgataaaatcaaaacgtatttttttttaaaaaaacaatgttctat 34290652  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  34290653 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacctaacacca 34290752  T
Q  217 aaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt---nnnnnnnnttggagggcagtaatact 313  Q
    ||| |||||| ||||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||           ||||||||||||| ||||    
T  34290753 aaaacaagaggacctaattctaataggcctaaaaggctaaaacaaggggacataaaatggttgggggtattaaaaaaaaaaattggagggcagtagtact 34290852  T
Q  314 agtgggtatt-aaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 399  Q
    ||||| |||| ||||| ||| |||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  34290853 agtggatattaaaaaaaaaaattgaggcccatgcctgagggaggcccaactctgttgagctgtttgcaccccctcagggtcgggcctg 34290940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 18 - 399
Target Start/End: Original strand, 50939152 - 50939534
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||| |||||||||||||||||||||||           |||| ||||||| ||||||    
T  50939152 cagggccgtccctaagaattcgggggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaa-agcaatgatctatt 50939250  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||    
T  50939251 tatattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgaggaacccccgcctaacaccaa 50939350  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt--nnnnnnnnttggagggcagtaatactag 315  Q
    |||||| || ||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||          ||||||||||||| |||| |    
T  50939351 aagcaaaaggacctaattctaataggcctaaaagactaaaacaaggagacagaaaatggctggggttattaaaaaaaaaattggagggcagtagtactgg 50939450  T
Q  316 tgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacc-cctcagggtcgggcctg 399  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  50939451 tgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcacctcctcagggacgggcctg 50939534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 18 - 382
Target Start/End: Original strand, 54407073 - 54407439
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagag---caatgttct 114  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||           |||| |    |||||||||    
T  54407073 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgtttttttttttaaaaaaaaaacaatgttct 54407172  T
Q  115 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacac 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| ||||||||||||    
T  54407173 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat-agtaacccccacctaacac 54407271  T
Q  215 caaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcagtaatact 313  Q
    |||||||||||| ||||||||||||||||||||||||  ||||| ||||||||||||||| ||||||||||||         ||||||||||||| ||||    
T  54407272 caaaagcaagaggacctaattctaataggcctaaaaggctaaaagaaggggacagaaaatagctgggggtattaaaaaaaaattggagggcagtagtact 54407371  T
Q  314 agtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacc 382  Q
    ||| ||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  54407372 agtaggtattaaaaa-aaaattgaggcccatgactgagggaggcccaactctgttgagctgtttgcacc 54407439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 99 - 400
Target Start/End: Original strand, 9878686 - 9878986
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  9878686 aaaagagcaatattctatttatattttttaaaagataaatataaggtgcagtatatatgcggtacacccaaaggtgaaaatgactatcgtatacataagg 9878785  T
Q  199 aactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttg 298  Q
    ||| |||| ||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||        |||    
T  9878786 aacccccatctaacgccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattaaaaaaaattg 9878885  T
Q  299 gagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcc 397  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||| ||| ||    
T  9878886 gagggcagtaatactagtgggtattaaaa--aaaattgaggcccatgattaagggaggcccagctctgttgagctgtttgcaccccctcagggccggacc 9878983  T
Q  398 tga 400  Q
    |||    
T  9878984 tga 9878986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 22 - 349
Target Start/End: Complemental strand, 37168551 - 37168223
Alignment:
Q  22 gccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttata 121  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||           |||| | ||||||||||||||||    
T  37168551 gccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaaaaacaatgttctatttata 37168452  T
Q  122 ttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaagc 221  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37168451 ttttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacactaaaagc 37168352  T
Q  222 aagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt--nnnnnnnnttggagggcagtaatactagtggg 319  Q
    ||||| |||||||| |||||||||||||||  ||||||||||||||| ||||| ||||||||||||          ||||||||||||| ||||||||||    
T  37168351 aagaggacctaattataataggcctaaaaggctaaaacaaggggacataaaatagctgggggtattaaaaaaaaaattggagggcagtagtactagtggg 37168252  T
Q  320 tattaaaaacaaacttgaggcccatgactg 349  Q
    ||||||||| ||| || |||||||||||||    
T  37168251 tattaaaaa-aaaattaaggcccatgactg 37168223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 160; E-Value: 8e-85
Query Start/End: Original strand, 24 - 399
Target Start/End: Complemental strand, 48157310 - 48156942
Alignment:
Q  24 cgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttatatt 123  Q
    ||||||||||||||||||||||| | || |||||| |||| |||||||||||||||||||||| |          ||||  |||||| ||||||||||||    
T  48157310 cgtccctaagaattcggaggctcggttccgggaataaaaagaggccagtgataaaatcaaaac-acatttttaaaaaaaatgcaatgatctatttatatt 48157212  T
Q  124 ttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaagcaa 223  Q
    |||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||| |||||||||    
T  48157211 ttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccacttaacatcaaaagcaa 48157122  T
Q  224 gagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt--nnnnnnnnttggagggcagtaatactagtgggta 321  Q
    ||| || |||||||| ||||| ||||||  ||||||||||||||||||||||||||||||||||          |||||||||| |||||||||||||||    
T  48157121 gaggacgtaattctagtaggcttaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaaattggagggcattaatactagtgggta 48157022  T
Q  322 tt-aaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 399  Q
    || ||||| ||| || |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  48157021 ttaaaaaataaaatttaggcccatgattgagggaggcccagctctgttgagctgtttgcaccccctcagggccgggcctg 48156942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 18 - 275
Target Start/End: Original strand, 8073257 - 8073512
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||| ||| |||||||||||||||||||           ||||||| |||||||||||    
T  8073257 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacg-tattttttttaaaagagtaatgttctatt 8073355  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||    
T  8073356 tatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaac-cccacataacaccaa 8073454  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    |||||| || | ||||||||||||||||||||||  ||||||||| ||||| ||||||    
T  8073455 aagcaataggaactaattctaataggcctaaaaggctaaaacaagaggacataaaatg 8073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 54619121 - 54619355
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||| | |||| |||||||||||||||            |||||||||||||||||||    
T  54619121 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaagccaatgataaaatcaaaacataattttttttaaaagagcaatgttctatt 54619220  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  54619221 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 54619320  T
Q  218 aagcaagagaacctaattctaataggcctaaaaga 252  Q
    || |||||| | ||||||||||||  |||||||||    
T  54619321 aatcaagaggaactaattctaataatcctaaaaga 54619355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 38681011 - 38681245
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||            |||||||||||||||||||    
T  38681011 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatt 38681110  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  38681111 tatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaaaccccacctaacaccaa 38681210  T
Q  218 aagcaagagaacctaattctaataggcctaaaaga 252  Q
    || |||||| | ||||||||||||  |||||||||    
T  38681211 aatcaagaggaactaattctaataatcctaaaaga 38681245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 19 - 275
Target Start/End: Original strand, 3953816 - 3954071
Alignment:
Q  19 agggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctattt 118  Q
    |||||||||||| |||||||||||| || ||||||| |||||||| |||||||||||||||| |||| |           |||||| |||||||||||||    
T  3953816 agggccgtccctgagaattcggaggttccgctctggaaatgaaaagaggccagtgataaaattaaaatg-tattttttttaaaagaacaatgttctattt 3953914  T
Q  119 atattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaa 218  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  3953915 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgaggaacccccacctaacaccaaa 3954014  T
Q  219 agcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    | |||||| | ||||||||||||  ||||||||  ||||||||| | ||||||||||    
T  3954015 atcaagaggaactaattctaataatcctaaaaggctaaaacaagagaacagaaaatg 3954071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 21582960 - 21582758
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaatgttctat 116  Q
    ||||||||||||| ||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||| |          |||||| ||||||| |||    
T  21582960 cagggccgtccctgagaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagaacaatgttttat 21582861  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  21582860 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 21582761  T
Q  217 aaa 219  Q
    |||    
T  21582760 aaa 21582758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 47467872 - 47467671
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||            ||||||| ||||||||||    
T  47467872 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtgttttttttttaaagagcgatgttctatt 47467773  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  47467772 tatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 47467673  T
Q  218 aa 219  Q
    ||    
T  47467672 aa 47467671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 36715941 - 36716177
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaatgttcta 115  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||||| |||||  |          |||||||||||||||||    
T  36715941 acagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaataaaaacataatttttatttaaaagagcaatgttcta 36716040  T
Q  116 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacc 215  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||| ||||||||| ||||| || |||||||||||||    
T  36716041 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgagggacccccacctaacacc 36716140  T
Q  216 aaaagcaagagaacctaattctaataggcctaaaaga 252  Q
    |||| |||||| | ||||||||||||  |||||||||    
T  36716141 aaaatcaagaggaactaattctaataatcctaaaaga 36716177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 27078486 - 27078721
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaatgttctat 116  Q
    ||||||||||||| ||||||||||||||  ||||||| |||||||| ||| ||||||||||||||||||  |          |||| |||||||||||||    
T  27078486 cagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacataatttttttttaaaaaagcaatgttctat 27078585  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| || |||||||||||    
T  27078586 ttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccctacctaacacca 27078685  T
Q  217 aaagcaagagaacctaattctaataggcctaaaaga 252  Q
    ||| |||||  | ||||||||||||  |||||||||    
T  27078686 aaatcaagatgaactaattctaataatcctaaaaga 27078721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 27084283 - 27084518
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaatgttctat 116  Q
    ||||||||||||| ||||||||||||||  ||||||| |||||||| ||| ||||||||||||||||||  |          |||| |||||||||||||    
T  27084283 cagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacataatttttttttaaaaaagcaatgttctat 27084382  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| || |||||||||||    
T  27084383 ttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccctacctaacacca 27084482  T
Q  217 aaagcaagagaacctaattctaataggcctaaaaga 252  Q
    ||| |||||  | ||||||||||||  |||||||||    
T  27084483 aaatcaagatgaactaattctaataatcctaaaaga 27084518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 53149235 - 53149433
Alignment:
Q  21 ggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttat 120  Q
    ||||||| || ||||||||||||||||| || ||||||||||| || ||||||||||||||||||||           |||||||| |||||||||||||    
T  53149235 ggccgtctctgagaattcggaggctcagttcggggaatgaaaagagaccagtgataaaatcaaaacgtttttttttttaaaagagcgatgttctatttat 53149334  T
Q  121 attttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaa 219  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| || || | ||||||||||||||||||||||||||| |||||||||||||||||    
T  53149335 attttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 53149433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 42098989 - 42098788
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| |||||||| ||||||||||| || |||||||| ||||||||||||||||||||| |           |||||||| ||||||||||    
T  42098989 cagggccgtccctgagaattcgaaggctcagctcgggaaatgaaaagaggccagtgataaaatcaaaatgtctttttttttaaaagagcgatgttctatt 42098890  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||||||||||||||||||| || || |||||||||||||||||||||||||||||||| || || |||||||||    
T  42098889 tatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgaggaacccctacttaacaccaa 42098790  T
Q  218 aa 219  Q
    ||    
T  42098789 aa 42098788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 32 - 251
Target Start/End: Complemental strand, 18372656 - 18372434
Alignment:
Q  32 agaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttatattttttaaaa 131  Q
    |||||||||||||||  | ||||||||||||| ||| |||||||||||||||||||           |||||||||||||||||||||||||||||||||    
T  18372656 agaattcggaggctcgacactgggaatgaaaagaggtcagtgataaaatcaaaacg-tattttttttaaaagagcaatgttctatttatattttttaaaa 18372558  T
Q  132 gataaatataaggtgccgtatatatgcg----gtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaagcaagaga 227  Q
    |||||||| |||||| ||||||||||||    |||||| || |||||||||||||||||||||||||||||||  |||| |||||||||||| ||||||     
T  18372557 gataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacatgaggaatccccatctaacaccaaaatcaagagg 18372458  T
Q  228 acctaattctaataggcctaaaag 251  Q
    | ||||||||||||  ||||||||    
T  18372457 aactaattctaataatcctaaaag 18372434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 400 - 517
Target Start/End: Complemental strand, 26403679 - 26403558
Alignment:
Q  400 atcaggtacatagttgataaagctaataacttgaaacccgaacgactagataa----atttattttaatctttgaattaaaagtttattaaatttatgat 495  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||| ||    
T  26403679 atcaggtacatagttgataaagctaataacttgaaacccgaacgactagataattaaatttattttaatctttgaattaaaagtttattaaatttattat 26403580  T
Q  496 actagttttttcaggttttact 517  Q
    ||||||||||||||||||||||    
T  26403579 actagttttttcaggttttact 26403558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 36606149 - 36605973
Alignment:
Q  21 ggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttat 120  Q
    |||||||||| | |||||||||| || ||||||| |||||||| ||| |||||||||||||||||||           || |||||||||||||||||||    
T  36606149 ggccgtccctgaaaattcggaggttcggctctggaaatgaaaagaggtcagtgataaaatcaaaacg-tattttttttaatagagcaatgttctatttat 36606051  T
Q  121 attttttaaaa-gataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||    
T  36606050 attttttaaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaat-actaccgtatacatgagg 36605973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 50258542 - 50258731
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||| ||| ||||||||||||||| |||||||||| ||||| ||  |||||||||||||||||| |          |||||||| ||||||||||    
T  50258542 cagggccgttcctgagaattcggaggctcggctctgggaacgaaaagagatcagtgataaaatcaaaac-atatttttttaaaaagagcgatgttctatt 50258640  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacaccc-aaaggtgaaaatgactaccgtatacatgaggaactcccac 207  Q
    |||||||||||||| ||||||| |||||| ||||||||||||||||||||  | ||||||||||||||  |||| |||||||||| |||||    
T  50258641 tatattttttaaaaaataaatacaaggtgtcgtatatatgcggtacacccggagggtgaaaatgactattgtatgcatgaggaacccccac 50258731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 135 - 252
Target Start/End: Original strand, 29620423 - 29620540
Alignment:
Q  135 aaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaat 234  Q
    ||||| |||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||| |||||||||||||| || |||||| | |||||    
T  29620423 aaatacaaggtgccgtatatatgcggtatatccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccacaatcaagaggaactaat 29620522  T
Q  235 tctaataggcctaaaaga 252  Q
    | |||||  |||||||||    
T  29620523 tttaataatcctaaaaga 29620540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 54574826 - 54574928
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| |||||| |||| ||||||| ||||| |||||||||||||||||||||||| || ||||| |||||| |||||||||||    
T  54574826 aaaagaacaatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgagg 54574925  T
Q  199 aac 201  Q
    |||    
T  54574926 aac 54574928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 8420425 - 8420331
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||  ||||||||||| |||||||| ||| ||||||| | |||||||    
T  8420425 aatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacccaaatgtgaaaatcactgccgtatatacgaggaac 8420331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 26279649 - 26279563
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactac 185  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||| |||||||||||  ||||||||||| ||||||| |||||    
T  26279649 aaaagaacaatgttctatttaaattttttaaaagataaatagaaggtgtcgtatatatgcaatacacccaaagatgaaaatcactac 26279563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 28689368 - 28689458
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    ||||||||||||| |||||  |||||||||||| ||||||||||||||||||| || | |||||||||||||| ||| |||||||||||||    
T  28689368 aatgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgag 28689458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 32319162 - 32319256
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    ||||||||||||| ||||||||||||||||||| || |||  ||||||||||||||||||||||||||||||| |||| | |||| | |||||||    
T  32319162 aatgttctatttaaattttttaaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaattactatcttatatacgaggaac 32319256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 49393195 - 49393099
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    ||||| ||||||||| |||| ||||||||||||||||||| |||| | ||||||||||  |||||||||||||| ||||| |||||||||||||||||    
T  49393195 aaagaacaatgttctctttaaattttttaaaagataaatacaaggcgtcgtatatatg-tgtacacccaaaggtaaaaattactaccgtatacatgag 49393099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 48720427 - 48720498
Alignment:
Q  16 tacagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg 87  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||| |||  ||||||||||||||||||    
T  48720427 tacagggccgtccctaagaattgggaggctcggctctgggaatgaaaagaggtaagtgataaaatcaaaacg 48720498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 100 - 193
Target Start/End: Complemental strand, 25855527 - 25855435
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtataca 193  Q
    ||||| |||||||||||||| |||||||||||||||| || |||||| ||||||||||  || ||||||||| ||||||| |||||||||||||    
T  25855527 aaagaacaatgttctatttaaattttttaaaagataa-tacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtataca 25855435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 29620364 - 29620426
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaat 80  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| ||| ||||||||||||    
T  29620364 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaat 29620426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 334 - 400
Target Start/End: Original strand, 48720530 - 48720596
Alignment:
Q  334 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcagggtcgggcctga 400  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||| |||||| || ||||||    
T  48720530 ttgaggcccatgactgagggaagctcagctctgttgagctgtttgcacccgtcagggccgtgcctga 48720596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 790042 - 789941
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 199  Q
    ||||| |||| ||||||||| ||||||||||  ||||||| |||||| | ||||||||  |||||||||||||| ||||| || ||| ||||||||||||    
T  790042 aaagaacaatcttctatttaaattttttaaacaataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgagga 789943  T
Q  200 ac 201  Q
    ||    
T  789942 ac 789941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 628 - 733
Target Start/End: Complemental strand, 26395520 - 26395415
Alignment:
Q  628 ttgctcacaactataagtaacataagtatacagtttgagcatcttaggatccattttttgtattgcttggtcaccaacactatcacttgtagttgcacta 727  Q
    |||||||||| ||||||| ||| |||||||| |||||||| |||| |||||||  |||||| ||||||| |||||||||| | || ||| || |||||||    
T  26395520 ttgctcacaaatataagttacacaagtataccgtttgagcctctttggatccaaattttgtgttgcttgatcaccaacaccaacatttgcagatgcacta 26395421  T
Q  728 ccacca 733  Q
    ||||||    
T  26395420 ccacca 26395415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 710 - 794
Target Start/End: Complemental strand, 26402577 - 26402493
Alignment:
Q  710 tcacttgtagttgcactaccaccattgatgcggttcttcttaacatgaccaagatttgatttctctatattcatgttattgttgt 794  Q
    |||| ||||||||| ||||||||||| ||| ||||||||| || || ||||||||||||||| |||||||| | |||||||||||    
T  26402577 tcacctgtagttgctctaccaccattcatgtggttcttctcaatataaccaagatttgatttttctatatttaagttattgttgt 26402493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 42453511 - 42453435
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtga 175  Q
    |||||| |||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| ||||||||    
T  42453511 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 42453435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 23641329 - 23641382
Alignment:
Q  111 ttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtaca 164  Q
    ||||||||||||||||||||||||||||| || ||| |||||||||||||||||    
T  23641329 ttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtaca 23641382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 8420305 - 8420258
Alignment:
Q  203 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  8420305 cccacctaacaccaaaagcaagagaacccaattctaatatgcctaaaa 8420258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 250
Target Start/End: Complemental strand, 29598086 - 29598040
Alignment:
Q  204 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    
T  29598086 ccacctaacaccaaaagcaagatgacctaattctaataggcctaaaa 29598040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 52374763 - 52374661
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| |||||||   | ||||||| || ||| |||||| ||||| |||| | ||||| |||||| |||||||||||||||| |    
T  52374763 aaaagaacaatgttctatttaaatttttttttaaataaatacaatgtgtcgtatagatgcgatacatctaaaggagaaaatcactaccgtatacatgaag 52374664  T
Q  199 aac 201  Q
    |||    
T  52374663 aac 52374661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 49393068 - 49393023
Alignment:
Q  205 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||    
T  49393068 cacctaacaccaaaagtaagaggacctaattctaataggcctaaaa 49393023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 52374637 - 52374590
Alignment:
Q  203 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||    
T  52374637 cccacctaacaccaaaagcaagaggactcaattctaataggcctaaaa 52374590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 333 - 390
Target Start/End: Complemental strand, 47467648 - 47467591
Alignment:
Q  333 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcaggg 390  Q
    ||||||||||||   |||||||||| ||||||  ||||||||||||||||||||||||    
T  47467648 cttgaggcccatccttgagggaggctcagctcgtttgagctgtttgcacccctcaggg 47467591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 29598179 - 29598113
Alignment:
Q  133 ataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaa 200  Q
    ||||||| ||||| ||||||||||| | ||||| ||||| ||||| | ||||||||||||||||||||    
T  29598179 ataaatacaaggttccgtatatatgtgatacactcaaagatgaaa-tcactaccgtatacatgaggaa 29598113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 50258733 - 50258784
Alignment:
Q  333 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  50258733 cttgaggcccatccttgagggaggcccagctcatttgagctgtttgcacccc 50258784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 335 - 385
Target Start/End: Complemental strand, 36605911 - 36605861
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccct 385  Q
    ||||||||||   |||||||||||||||||  |||||||||||||||||||    
T  36605911 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccct 36605861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 27078819 - 27078868
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  27078819 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 27078868  T

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Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 27084616 - 27084665
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  27084616 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 27084665  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 36716276 - 36716325
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  36716276 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 36716325  T

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Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 38681348 - 38681397
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  38681348 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 38681397  T

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Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 54619454 - 54619503
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  54619454 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 54619503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 243; Significance: 1e-134; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 17 - 399
Target Start/End: Complemental strand, 26716314 - 26715931
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctat 116  Q
    |||||||||||||||||||||||  ||||| ||| |||||||||||| ||| |||||||||||||||||||           ||||||||||||||||||    
T  26716314 acagggccgtccctaagaattcgttggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacgtatttttttttaaaagagcaatgttctat 26716215  T
Q  117 ttatatttttt-aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacc 215  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  26716214 ttatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaca 26716115  T
Q  216 aaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactag 315  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||        ||| ||||||||||||||||    
T  26716114 aaaagcaagagaacctaattctaataggtctaaaagactaaaacaaggggacataaaatggctgggggtattaaaaaaaattgaagggcagtaatactag 26716015  T
Q  316 tgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 399  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  26716014 tgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggccgggcctg 26715931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 18 - 399
Target Start/End: Original strand, 27506659 - 27507041
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||           |||| ||||||| ||||||    
T  27506659 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattttttaaaaaaa-agcaatgatctatt 27506757  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  27506758 tatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgaggaactcccacctaacaccaa 27506857  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcagtaatactagt 316  Q
    ||||||||  ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||         ||||||||||||| ||||| |    
T  27506858 aagcaagatgacctaattctaataggcctaaaaggctaaaacaaggagacagaaaatggctgggggtattaaattttttttggagggcagtagtactaat 27506957  T
Q  317 gggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 399  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  27506958 gggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggacgggcctg 27507041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 18 - 384
Target Start/End: Complemental strand, 9046213 - 9045848
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    |||||||||||| |||||||||  ||||||||||||||||| |||| |||||||||||||||||||||||           |||||| ||||||||||||    
T  9046213 cagggccgtcccaaagaattcgttggctcagctctgggaattaaaagaggccagtgataaaatcaaaacg-tattgtttttaaaagaacaatgttctatt 9046115  T
Q  118 tatatttttt-aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  9046114 tatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacaa 9046015  T
Q  217 aaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagt 316  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||||| ||||| ||||||||||||        ||||||||||||||||||| |    
T  9046014 aaagcaagaggacctaattctaataagcctaaaagactaaaacaaggggacataaaatagctgggggtattaaaaaaaattggagggcagtaatactaat 9045915  T
Q  317 gggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9045914 gggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 9045848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 21 - 399
Target Start/End: Original strand, 10762488 - 10762865
Alignment:
Q  21 ggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttat 120  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||            |||||||||||||||||||||    
T  10762488 ggccgtccctaagaatttggaggctcagctctgggaatgaaaagaggccagtgataaaattaaaacgtttttttttt--aaagagcaatgttctatttat 10762585  T
Q  121 attttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaag 220  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  10762586 attttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaatg 10762685  T
Q  221 caagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtgggt 320  Q
    |||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||        ||||||| ||||| ||| |||||||    
T  10762686 caagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgagggtattaaaaacaattggaggacagtagtaccagtgggt 10762785  T
Q  321 attaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 399  Q
    |||||||| ||| ||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| ||| ||||    
T  10762786 attaaaaaaaaaattgaggcccatgattgagggaagcccagctctgttgagctgtttgcatcccctcagggccggccctg 10762865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 401
Target Start/End: Complemental strand, 24410623 - 24410234
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnna--aaagagcaatgttcta 115  Q
    ||||||||||||||||||||||||||||| | | |||||||||||| |||||||||||||||||||||||              ||| | ||||||||||    
T  24410623 cagggccgtccctaagaattcggaggctcggttttgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttttaaaaaacaatgttcta 24410524  T
Q  116 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaa-ctcccacctaacac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  24410523 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccccccacctaacac 24410424  T
Q  215 caaaagcaagagaacctaattctaataggcctaaaagattaaaacaa-ggggacagaaaatggctgggggtatt--nnnnnnnnttggagggcagtaata 311  Q
    ||||| |||||| ||||||||||||| ||||||||||  |||||||| ||||||||||||| ||||||||||||          |||||||| |||| ||    
T  24410423 caaaaacaagaggacctaattctaattggcctaaaaggctaaaacaagggggacagaaaatagctgggggtattaaaaaaaaaattggagggtagtagta 24410324  T
Q  312 ctagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctgat 401  Q
    ||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  24410323 ctaatgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccccttagggacgggcctgat 24410234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 18 - 275
Target Start/End: Original strand, 29939781 - 29940037
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    |||| |||||||| |||||||| |||||| ||||||||||| |||| ||| |||||||||||||||||||           |||||||||||||||||||    
T  29939781 caggaccgtccctgagaattcgaaggctcggctctgggaataaaaagaggtcagtgataaaatcaaaacg-tattttttttaaaagagcaatgttctatt 29939879  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  29939880 tatattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccaccacctaacaccaa 29939979  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    ||||||||| | ||||||||||||| |||||||| |||||||||| ||||||||||||    
T  29939980 aagcaagaggaactaattctaatagacctaaaaggttaaaacaagaggacagaaaatg 29940037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 4506078 - 4505844
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||            |||||||||||||||||||    
T  4506078 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatt 4505979  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  4505978 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaa 4505879  T
Q  218 aagcaagagaacctaattctaataggcctaaaaga 252  Q
    || |||||| | ||||||||||||  |||||||||    
T  4505878 aatcaagaggaactaattctaataatcctaaaaga 4505844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 21 - 241
Target Start/End: Complemental strand, 6965186 - 6964968
Alignment:
Q  21 ggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttat 120  Q
    |||||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||||||||||  |          ||||||||||||||||||||||    
T  6965186 ggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaataatttttttt--aaaagagcaatgttctatttat 6965089  T
Q  121 attttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaag 220  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  6965088 attttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaat 6964989  T
Q  221 caagagaacctaattctaata 241  Q
    |||||| | ||||||||||||    
T  6964988 caagaggaactaattctaata 6964968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 16 - 252
Target Start/End: Original strand, 12337363 - 12337600
Alignment:
Q  16 tacagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaatgttct 114  Q
    ||||||||||||||| |||||||| |||||| ||||||| |||||||| |||||||||||||||||||||   |          ||||||||||||||||    
T  12337363 tacagggccgtccctgagaattcgaaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatataatttttttttaaaagagcaatgttct 12337462  T
Q  115 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacac 214  Q
    ||||||||||||||||||||||||| |||||| | |||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  12337463 atttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 12337562  T
Q  215 caaaagcaagagaacctaattctaataggcctaaaaga 252  Q
    ||||| |||||| | ||||||||||||  |||||||||    
T  12337563 caaaatcaagaggaactaattctaataatcctaaaaga 12337600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 3155402 - 3155167
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctat 116  Q
    |||||||||||||| ||||||||||||||| ||| |   |||||||| ||| |||||||||||| |||||            ||||||||||||||||||    
T  3155402 acagggccgtccctgagaattcggaggctcggctttaaaaatgaaaagaggtcagtgataaaattaaaacataattttttttaaaagagcaatgttctat 3155303  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||    
T  3155302 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 3155203  T
Q  217 aaagcaagagaacctaattctaataggcctaaaaga 252  Q
    ||| |||||| | ||||||||||||  |||||||||    
T  3155202 aaatcaagaggaactaattctaataatcctaaaaga 3155167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 8906996 - 8907231
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaatgttctat 116  Q
    ||||||||| ||| ||||||||||||||| ||||||  |||||||| ||||||||||||||||||||||  |          ||||||| ||||||||||    
T  8906996 cagggccgttcctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagtaatgttctat 8907095  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  8907096 ttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaacccccacctaacacca 8907195  T
Q  217 aaagcaagagaacctaattctaataggcctaaaaga 252  Q
    ||| |||||| |  |||||||||||  |||||||||    
T  8907196 aaatcaagaggaattaattctaataatcctaaaaga 8907231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 197 - 379
Target Start/End: Complemental strand, 8327671 - 8327488
Alignment:
Q  197 ggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctg-ggggtatt-nnnnnnn 294  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||            
T  8327671 ggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctggggggtattaaaaaaaa 8327572  T
Q  295 nttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgc 379  Q
     ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8327571 attggagggcagtagtactagtgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgc 8327488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 7162967 - 7162767
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||| |||| ||||||||||| ||||||||||| |||||||||||||||| |||| |           |||||||| ||||||||||    
T  7162967 cagggccgtccctgagatttcgaaggctcagctcggggaatgaaaagaggccagtgataaaattaaaatg-tcttttttttaaaagagcgatgttctatt 7162869  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||||||||||||||||||| || || |||||||||||||||||||||| ||||||||| || ||||||||||||    
T  7162868 tatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgaggaacccctacctaacaccaa 7162769  T
Q  218 aa 219  Q
    ||    
T  7162768 aa 7162767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 40636317 - 40636164
Alignment:
Q  22 gccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttata 121  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |          |||||||||||||||||||||||    
T  40636317 gccgtccctgagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaac-atattttttttaaaagagcaatgttctatttata 40636219  T
Q  122 ttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaa 176  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  40636218 ttttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtgaa 40636164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 3953188 - 3952989
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||| ||||||| |||||| |||||||| ||| ||| |||||||| ||| ||||||||||||||||| |            ||||| | ||||||||||    
T  3953188 cagggtcgtccctgagaatttggaggctcggctttggaaatgaaaagaggtcagtgataaaatcaaaatgtatttttttt--aaagaccgatgttctatt 3953091  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||||||| |||||||||| |||||||||||||||    
T  3953090 tatattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgaggaacccccacctaacaccaa 3952991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 21 - 186
Target Start/End: Complemental strand, 34694155 - 34693991
Alignment:
Q  21 ggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttat 120  Q
    |||||||||| |||||||||||| || | ||||| |||||||| ||||| |||||||||||||||||           ||||||||||||||||||||||    
T  34694155 ggccgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacg-tattttttttaaaagagcaatgttctatttat 34694057  T
Q  121 attttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactacc 186  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||| |||| ||||||||||||    
T  34694056 attttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34693991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 21 - 186
Target Start/End: Complemental strand, 34716567 - 34716403
Alignment:
Q  21 ggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttat 120  Q
    |||||||||| |||||||||||| || | ||||| |||||||| ||||| |||||||||||||||||           ||||||||||||||||||||||    
T  34716567 ggccgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacg-tattttttttaaaagagcaatgttctatttat 34716469  T
Q  121 attttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactacc 186  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||| |||| ||||||||||||    
T  34716468 attttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34716403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 16097111 - 16097009
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||| |||||| |||||||||||    
T  16097111 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgagg 16097012  T
Q  199 aac 201  Q
    |||    
T  16097011 aac 16097009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 24035544 - 24035645
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||||||||||||| ||||| |||||| |||||||||||| ||||||| ||||||||||    
T  24035544 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgagg 24035643  T
Q  199 aa 200  Q
    ||    
T  24035644 aa 24035645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 5952642 - 5952791
Alignment:
Q  24 cgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttatatt 123  Q
    ||||||| |||||||||||| || ||||| |||||||||| |||||| ||||||||||||||||           |||||||||||||| |||||||  |    
T  5952642 cgtccctgagaattcggaggttcggctctcggaatgaaaagaggccaatgataaaatcaaaacg-tattttttttaaaagagcaatgttatatttat--t 5952738  T
Q  124 ttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaa 176  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  5952739 ttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 5952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 13800543 - 13800646
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacaccc-aaaggtgaaaatgactaccgtatacatgag 197  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||  |||||| |||    
T  13800543 aaaagaacaatgttctatttaaattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaaggtgaaaatcactactatatacacgag 13800642  T
Q  198 gaac 201  Q
    ||||    
T  13800643 gaac 13800646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 38400899 - 38400799
Alignment:
Q  101 aagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaa 200  Q
    |||| |||||||||||||| ||||||||||||||||||| |||||| | |||||||||| ||||  ||||||||||||| ||||||||||||||||||||    
T  38400899 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaa 38400800  T
Q  201 c 201  Q
    |    
T  38400799 c 38400799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 12134039 - 12134141
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| |   ||||||||||||||| ||||| ||||||||||||| |||||||||| |||||||| |||||||||||||| |||    
T  12134039 aaaagaacaatgttctatttaaaaaatttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattagg 12134138  T
Q  199 aac 201  Q
    |||    
T  12134139 aac 12134141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 21665699 - 21665801
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| ||||||||||||||||||| | |||| |||||||||| | |||| | ||| |||||||| ||||||||||||||||||    
T  21665699 aaaagaacaatgttctatttaaattttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgagg 21665798  T
Q  199 aac 201  Q
    |||    
T  21665799 aac 21665801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 28425709 - 28425811
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| |  |||||||||||||||| |||||| ||||||||||| ||||||||||| |||||||| |||||| |||| ||||||    
T  28425709 aaaagaacaatgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgagg 28425808  T
Q  199 aac 201  Q
    |||    
T  28425809 aac 28425811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 8327801 - 8327674
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    |||| |||||||||| ||||||||||||||| ||||| |||||||| ||  |||||||||||||||||||           |||| ||||||| ||||||    
T  8327801 caggaccgtccctaaaaattcggaggctcagttctggaaatgaaaagagatcagtgataaaatcaaaacg-tattttttttaaaaaagcaatgatctatt 8327703  T
Q  118 tatattttttaaaagataaatataaggtg 146  Q
    |||||||||||||||||||||||||||||    
T  8327702 tatattttttaaaagataaatataaggtg 8327674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 7742132 - 7742235
Alignment:
Q  99 aaaagagcaatgttctatttatatttt-ttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    |||||| |||||||||||||||||||| |||||||||||||| || ||| | |||||||||| |||| |||||||||||||  |||| ||||| ||||||    
T  7742132 aaaagaacaatgttctatttatatttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgag 7742231  T
Q  198 gaac 201  Q
    ||||    
T  7742232 gaac 7742235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 1396617 - 1396730
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||| ||| | |||||||||||||||  |||||| |||||||| ||||||||||||||||||||||            |||||||||||||||||||    
T  1396617 cagggccttccttgagaattcggaggctcgactctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatt 1396716  T
Q  118 tatattttttaaaa 131  Q
    ||||||||||||||    
T  1396717 tatattttttaaaa 1396730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 100 - 179
Target Start/End: Complemental strand, 42029247 - 42029168
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaat 179  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||| | |||| |||  ||||||| ||||||||||||    
T  42029247 aaagaacaatgttctatttaaattttttaaaagataaatataaggtgtcatatacatgttgtacacctaaaggtgaaaat 42029168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 11912757 - 11912858
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 199  Q
    ||||| |||||||||||||| ||||   |||| ||||||| || |||||||||||||||  |||| |||||| ||||||| |||||||||||||| ||||    
T  11912757 aaagaacaatgttctatttaaatttaaaaaaaaataaatacaaagtgccgtatatatgcaatacatccaaagatgaaaatcactaccgtatacataagga 11912856  T
Q  200 ac 201  Q
    ||    
T  11912857 ac 11912858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 16227368 - 16227469
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 199  Q
    ||||| |||| ||||||||| ||||||||||||||||||| |||||| |||||||||| | |||||| | || ||||||| |||||  ||||||| ||||    
T  16227368 aaagaacaattttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactactatatacataagga 16227467  T
Q  200 ac 201  Q
    ||    
T  16227468 ac 16227469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 37182739 - 37182671
Alignment:
Q  133 ataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    ||||||| |||||| |||||||||||  |||||||||| |||||||| |||||||||||||||||||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaac 37182671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 22727530 - 22727598
Alignment:
Q  128 aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatga 196  Q
    ||||||||||||  | ||| ||||||||||||||||||||||| |||||||| |||||| |||||||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatga 22727598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 12134169 - 12134214
Alignment:
Q  205 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  12134169 cacctaacaccaaaagcaagagaactcaattctaataggcctaaaa 12134214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 24035672 - 24035719
Alignment:
Q  203 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  24035672 cccacctaacactaaaagcaagaggacctaattctaatagacctaaaa 24035719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 29694359 - 29694312
Alignment:
Q  203 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||    
T  29694359 cccacctaacaccaaaagcaagaggacccaattctaataggtctaaaa 29694312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 335 - 384
Target Start/End: Complemental strand, 4505744 - 4505695
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    |||||||||| | |||||||||||||||||  ||||||||||||||||||    
T  4505744 tgaggcccatcattgagggaggcccagctcgtttgagctgtttgcacccc 4505695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 22727456 - 22727496
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaata 139  Q
    |||||| |||||||||||||| |||||||||||||||||||    
T  22727456 aaaagaacaatgttctatttaaattttttaaaagataaata 22727496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 384
Target Start/End: Complemental strand, 3952966 - 3952915
Alignment:
Q  333 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  3952966 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 3952915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 37182645 - 37182598
Alignment:
Q  203 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    ||||||||||| |||||||||||  ||| |||||||||||||||||||    
T  37182645 cccacctaacagcaaaagcaagatgacccaattctaataggcctaaaa 37182598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 38400773 - 38400726
Alignment:
Q  203 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||||||||||  |||  ||||||||||||||||||    
T  38400773 cccacctaacaccaaaagcaagatgaccctattctaataggcctaaaa 38400726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Complemental strand, 3155068 - 3155019
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  3155068 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 3155019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 353 - 390
Target Start/End: Original strand, 5952949 - 5952986
Alignment:
Q  353 gaggcccagctctgttgagctgtttgcacccctcaggg 390  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  5952949 gaggcccagctcgtttgagctgtttgcacccctcaggg 5952986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Complemental strand, 6964857 - 6964808
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  6964857 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 6964808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 11912887 - 11912932
Alignment:
Q  205 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    ||||||||||||||| |||||  ||| |||||||||||||||||||    
T  11912887 cacctaacaccaaaatcaagatgacccaattctaataggcctaaaa 11912932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 242; Significance: 1e-134; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 18 - 384
Target Start/End: Original strand, 16198709 - 16199076
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||            ||| ||||||||||||||    
T  16198709 cagggccttccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaaagcaatgttctatt 16198808  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16198809 tatattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 16198908  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcagtaatactagt 316  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||         ||||||||||||| || ||||    
T  16198909 aagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaattggagggcagtagtattagt 16199008  T
Q  317 gggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16199009 gggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 16199076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 18 - 400
Target Start/End: Original strand, 38869279 - 38869660
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| |||| ||||||||||||||           |||||||||||||||||||    
T  38869279 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggtcagttataaaatcaaaacg-tattttttttaaaagagcaatgttctatt 38869377  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  38869378 tatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaacaccaa 38869477  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtg 317  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||        ||||| | ||||||||||||||    
T  38869478 aagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatgactgggggtattaaaaaaaattggatgacagtaatactagtg 38869577  T
Q  318 ggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctga 400  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||| || |||||||||    
T  38869578 ggtattaaaaa-aaatttgaggcccatgactgagggaggcccagctttgttgagctgtttgcaccccctcatggccgggcctga 38869660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 18 - 381
Target Start/End: Complemental strand, 9364476 - 9364113
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    |||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||             || ||||||||||||||    
T  9364476 cagggccacccctaagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttttaaaagcaatgttctatt 9364377  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  9364376 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacatcaa 9364277  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcagtaatactagt 316  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||         |||||| |||||| |||||||    
T  9364276 aagcaagaggacctaattctaatagacctaaaagactaaaacaaggggacataaaatggctgggggtattaaaaaaaaattggagagcagtagtactagt 9364177  T
Q  317 gggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcac 381  Q
    || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9364176 ggatattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcac 9364113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 18 - 384
Target Start/End: Original strand, 16799240 - 16799606
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaa-tgttcta 115  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| | | ||||||||||||||||||| |          ||||||| || |||||||    
T  16799240 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaaaacgtattttttttttaaaagagtaaatgttcta 16799339  T
Q  116 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacc 215  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||    
T  16799340 tttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccacataacacc 16799439  T
Q  216 aaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactag 315  Q
    ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| |||| |||||||||||||        |||||||||||||||||||     
T  16799440 aaaagcaagaggacctaattctaatagacctaaaagactaaaacaaggggaca-aaaaaggctgggggtattaaaaaaagttggagggcagtaatactaa 16799538  T
Q  316 tgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  16799539 tgggtgttaaaaa-aaaattgaggcccatgactgagggaggcctagctctattgagctgtttgcacccc 16799606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 18 - 399
Target Start/End: Complemental strand, 27924267 - 27923885
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    |||||||||  |||||||||||| |||||  ||||| ||||||||| |||||||||||||||||||||||           |||| |||||||  |||||    
T  27924267 cagggccgtttctaagaattcgggggctcgactctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaagcaatgacctatt 27924168  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||| |||||||||||    
T  27924167 tatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgaggaacgcccgcctaacaccaa 27924068  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcagtaatactagt 316  Q
    |||||| || ||||||||||||||||||||||||| |||||||||| |||||||||||| ||||| ||||         ||||||||||||| |||||||    
T  27924067 aagcaaaaggacctaattctaataggcctaaaagactaaaacaaggagacagaaaatggttggggatattaaaaaaaaattggagggcagtagtactagt 27923968  T
Q  317 gggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 399  Q
    |||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  27923967 gggtattaaaaa-aaaattgaggcccatgactgagggaggtccagctctgttgagctgtttgcaccccctcagggacgggcctg 27923885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 17 - 399
Target Start/End: Complemental strand, 7671119 - 7670728
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnn--------aaaagagcaa 108  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||                   |||| |||||    
T  7671119 acagggccgtccttaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttttaaaaaaaaaaagcaa 7671020  T
Q  109 tgttctatttatatttttt-aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccac 207  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |  |||||    
T  7671019 tgttctatttatatttttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgaggtatccccac 7670920  T
Q  208 ctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcag 306  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||         ||||||| |||    
T  7670919 ctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaattggaggacag 7670820  T
Q  307 taatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcagggtcgggcctg 399  Q
    || ||||||||||| ||||||| ||| || || ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  7670819 tagtactagtgggtgttaaaaa-aaaattaagacccatgactgagggaggcccaactctgttgagctgtttgcacccctcagggccgggcctg 7670728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 104 - 399
Target Start/End: Original strand, 40389537 - 40389831
Alignment:
Q  104 agcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactc 203  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||  ||||||||| |    
T  40389537 agcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgaggaaccc 40389636  T
Q  204 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggaggg 303  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||        ||||| ||    
T  40389637 ccacctaacactaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaacaattggatgg 40389736  T
Q  304 cagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccc-ctcagggtcgggcctg 399  Q
    || || ||||||||||||||||||  ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  40389737 caatagtactagtgggtattaaaa--aaaattgaggtccatgactgagggaggcccaggtctgttgagctgtttgcacccgctcagggccgggcctg 40389831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 19 - 343
Target Start/End: Original strand, 28822253 - 28822583
Alignment:
Q  19 agggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnn-----aaaagagcaatgttc 113  Q
    ||||||||||||||||||||||||| || ||| |||||||||||| |||  ||||||||||||||||||                |||||||||||||||    
T  28822253 agggccgtccctaagaattcggaggttcggctttgggaatgaaaagaggttagtgataaaatcaaaacgtattttttttttttttaaaagagcaatgttc 28822352  T
Q  114 tatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaaca 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  28822353 tatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatgaacccccacctaaca 28822452  T
Q  214 ccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggct-gggggtattnnnnnnnnttggagggcagtaatac 312  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||| | |||||||||        |||||||||||||||||    
T  28822453 ccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacataaaatggttggggggtattaaaaacaattggagggcagtaatac 28822552  T
Q  313 tagtgggtattaaaaacaaacttgaggccca 343  Q
    ||||| |||||||||| ||| ||||||||||    
T  28822553 tagtgtgtattaaaaaaaaaattgaggccca 28822583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 27079197 - 27078939
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaatgttctat 116  Q
    ||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||| |          ||||||||||||||||||    
T  27079197 cagggccgtccctgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttctat 27079098  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  27079097 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgaggaacccccacctaacacca 27078998  T
Q  217 aaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    |||   |||| | ||||||| ||||  ||||||||  ||||||||| ||||||||||||    
T  27078997 aaatatagaggaactaattccaataatcctaaaaggctaaaacaagaggacagaaaatg 27078939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 26 - 252
Target Start/End: Original strand, 34756289 - 34756515
Alignment:
Q  26 tccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttatatttt 125  Q
    ||||| ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||            |||||||||||||||||||||||||||    
T  34756289 tccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatttatatttt 34756388  T
Q  126 ttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaagcaaga 225  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||    
T  34756389 ttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaacaaaatcaaga 34756488  T
Q  226 gaacctaattctaataggcctaaaaga 252  Q
    | | ||||||||||||  |||||||||    
T  34756489 ggaactaattctaataatcctaaaaga 34756515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 16591990 - 16592243
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||| | |||||| |||||||| |||||| ||||||||| |||||| ||||||||||||||| |          |||||||||||||||||||    
T  16591990 cagggccgtccttgagaatttggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaac-atattttttttaaaagagcaatgttctatt 16592088  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||| ||||||||||||| | |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||    
T  16592089 tatattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgaggaacccccacctaacaccaa 16592188  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaa 272  Q
    || |||||| | ||||||||||||  ||||||||  |||||||||  ||||||||    
T  16592189 aatcaagaggaactaattctaataatcctaaaaggctaaaacaagatgacagaaa 16592243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 30854511 - 30854258
Alignment:
Q  21 ggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttat 120  Q
    |||||||||| | |||| |||||||| |||||||||||||||| ||| ||| |||||||| ||||||           ||||||||||||||||||||||    
T  30854511 ggccgtccctgataatttggaggctcggctctgggaatgaaaaaaggtcagcgataaaattaaaacgtatttttttttaaaagagcaatgttctatttat 30854412  T
Q  121 attttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaag 220  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||| |||||||||||||||||     
T  30854411 attttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgaggaacccccacctaacaccaaaa- 30854313  T
Q  221 caagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
     ||||| | ||||||||||||  ||||||||  ||||||||| ||||| ||||||    
T  30854312 taagaggaactaattctaataatcctaaaaggctaaaacaagaggacataaaatg 30854258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 22 - 219
Target Start/End: Complemental strand, 19523380 - 19523183
Alignment:
Q  22 gccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttata 121  Q
    ||||||||| ||||||||||||||| |||||||||||||||| || ||||||||||||||||||||            |||||||  |||||||||||||    
T  19523380 gccgtccctgagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtgttttttttttaaagagcggtgttctatttata 19523281  T
Q  122 ttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaa 219  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  19523280 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaaa 19523183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 36187795 - 36187995
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||           |||||||| ||||||||||    
T  36187795 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg-ttttttttttaaaagagcgatgttctatt 36187893  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||  ||||||||||||||    
T  36187894 tatattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagaaacctccacctaacaccaa 36187993  T
Q  218 aa 219  Q
    ||    
T  36187994 aa 36187995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 23 - 219
Target Start/End: Complemental strand, 2275070 - 2274874
Alignment:
Q  23 ccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttatat 122  Q
    |||||||| ||||||||||||||| | |||||||||||||| |||||||||||||||||||||||           |||||||| |||||||||||||||    
T  2275070 ccgtccctgagaattcggaggctcggttctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaagagcgatgttctatttatat 2274971  T
Q  123 tttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaa 219  Q
    ||||||||||||||||| |||||  ||||||||||| ||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  2274970 tttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgaggaacccccacctaacaccaaaa 2274874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 15480006 - 15480205
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||             ||||| | ||||||||||    
T  15480006 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaac--atattttttttaaagaccgatgttctatt 15480103  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| ||| || ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  15480104 tatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacctaacaccaa 15480203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 22986473 - 22986652
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||| | |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||           |||||||||||||||||||    
T  22986473 cagggccgtccgtgagaattcggaggctcagctctgagaatgaaaagaggccagtgataaaatcaaaacgtaattttttttaaaagagcaatgttctatt 22986572  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
     ||||||||||||||| ||||| || ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22986573 aatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgag 22986652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 31194528 - 31194706
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||| || ||||||||||||||||||||           |||||||||||||||||||    
T  31194528 cagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacg-tatttcttttaaaagagcaatgttctatt 31194626  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||    
T  31194627 tatattttttaaaagataaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgagg 31194706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 23284058 - 23284160
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    ||||||||||||||||||||||||||||||||   |||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23284058 aaaagagcaatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggtacacccaaagatgaaaatgactaccgtatacatgagg 23284157  T
Q  199 aac 201  Q
    |||    
T  23284158 aac 23284160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 7338170 - 7338021
Alignment:
Q  32 agaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttatattttttaaaa 131  Q
    |||||| |||||||| ||||| |||||||||| ||| ||  |||||||||||||||            ||||||||||||||||||||||||||||||||    
T  7338170 agaatttggaggctcggctctaggaatgaaaagaggtcaaggataaaatcaaaacgttttttttttttaaagagcaatgttctatttatattttttaaaa 7338071  T
Q  132 gataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatga 181  Q
    |||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  7338070 gataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaatga 7338021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 31881348 - 31881528
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnn-aaaagagcaatgttctat 116  Q
    ||||||||||||| | ||||  ||||||| ||||||||||||||||  || |||| ||||||||||||||            ||||||||||||||||||    
T  31881348 cagggccgtccctgaaaatttagaggctcggctctgggaatgaaaagtggtcagtaataaaatcaaaacgttttttttttttaaaagagcaatgttctat 31881447  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    ||||||||||||||||||||||| | |||||||||||||||||| ||| ||| || ||||||| ||||||||||||||||||    
T  31881448 ttatattttttaaaagataaatacacggtgccgtatatatgcggaacatccagagatgaaaat-actaccgtatacatgagg 31881528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 36868872 - 36868973
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| ||||||||||||||  |||||||||||||||||| |||||| |||||||||| |||||||||||| |||||||| ||||||||||||||||||    
T  36868872 aaaagaacaatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgagg 36868971  T
Q  199 aa 200  Q
    ||    
T  36868972 aa 36868973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 14318382 - 14318483
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 199  Q
    ||||| |||||||||||||| ||||||||||||||||||| |||||| |||||||||| | |||| |||||  ||||||| |||||||||||||||||||    
T  14318382 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgagga 14318481  T
Q  200 ac 201  Q
    ||    
T  14318482 ac 14318483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 2024638 - 2024738
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| ||||||| ||||||||||| || |||||||||||||| | ||||||||||| ||||||| |||||| |||||||||||    
T  2024638 aaaagaacaatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaagatgaaaatcactaccatatacatgagg 2024737  T
Q  199 a 199  Q
    |    
T  2024738 a 2024738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 2530901 - 2530995
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    |||||||||||||  |||||||||||||||||| || ||| ||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||    
T  2530901 aatgttctatttaagttttttaaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaac 2530995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 34426007 - 34425905
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||  ||||||||||||||||||| ||||||||||||||||| | |||||| |||| | ||||| | ||||||||||||||||    
T  34426007 aaaagaacaatgttctatttcaattttttaaaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgagg 34425908  T
Q  199 aac 201  Q
    |||    
T  34425907 aac 34425905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 26718953 - 26719045
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 199  Q
    ||||||||||||| | ||||||||||||||||| || ||| |||||||||||| ||||| ||||||||||||| ||||||| |||||||||||    
T  26718953 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26719045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 26988697 - 26988789
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 199  Q
    ||||||||||||| | ||||||||||||||||| || ||| |||||||||||| ||||| ||||||||||||| ||||||| |||||||||||    
T  26988697 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26988789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 107 - 194
Target Start/End: Complemental strand, 10543769 - 10543682
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacat 194  Q
    ||||||| | ||| ||||||||||||||||||||||||||  ||||||||||| |||| |||||||||||||| ||||||||||||||    
T  10543769 aatgttccacttaaattttttaaaagataaatataaggtgatgtatatatgcgatacatccaaaggtgaaaatcactaccgtatacat 10543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 1366522 - 1366624
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| |||||||| |||||||||| ||| ||  ||||||||||| |||||| ||| |||||||| ||||||||||| ||||||    
T  1366522 aaaagaacaatgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgagg 1366621  T
Q  199 aac 201  Q
    |||    
T  1366622 aac 1366624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 33037884 - 33037782
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| ||||||| |||||| ||||||||||||||||||| ||| |  ||||||||||  |||||||||||||||||||  | ||||||||||||||||    
T  33037884 aaaagaacaatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgagg 33037785  T
Q  199 aac 201  Q
    |||    
T  33037784 aac 33037782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 2412191 - 2412090
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 199  Q
    ||||| |||||||||||||| ||||||||||| ||||||| || ||| |||||||||||| | || ||||| |||||||| ||||| |||||||||||||    
T  2412191 aaagaacaatgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgagga 2412092  T
Q  200 ac 201  Q
    ||    
T  2412091 ac 2412090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 107 - 202
Target Start/End: Complemental strand, 24395835 - 24395740
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaact 202  Q
    ||||||||||||| ||||||||||||||||||| ||||||  |||||||| |  |||| |||||||||||||| || |||||||| ||||||||||    
T  24395835 aatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgaggaact 24395740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 10407565 - 10407464
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| ||||||||||||||||| | |||||| |||| |||||  ||||| | ||| |||||||| |||||||||| |||||||    
T  10407565 aaaagaacaatgttctatttaaattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgagg 10407466  T
Q  199 aa 200  Q
    ||    
T  10407465 aa 10407464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 11242314 - 11242416
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| ||||||||||||||  |||||||||||||||||| ||  ||  ||||||||| | |||| |||||| || |||| ||||||||||||||||||    
T  11242314 aaaagaacaatgttctatttaatttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgagg 11242413  T
Q  199 aac 201  Q
    |||    
T  11242414 aac 11242416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 101 - 191
Target Start/End: Original strand, 22648734 - 22648824
Alignment:
Q  101 aagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtata 191  Q
    |||| |||||||||||||| ||||||||||||||||||| || ||| |||||||||| || ||| |||||||||| ||| ||||| |||||    
T  22648734 aagaacaatgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatgtggcacatccaaaggtgacaatcactactgtata 22648824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 99 - 197
Target Start/End: Original strand, 40794323 - 40794421
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    |||||| ||||||| |||||| ||||||||||||| ||||| || | |||||| ||||  | |||||| |||||||||||| |||||||||||||||||    
T  40794323 aaaagaacaatgttttatttaaattttttaaaagacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgag 40794421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 23283943 - 23284012
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg 87  Q
    ||||||||||||| ||||||| ||||||||| | | |||||||||| |||||||||||||||||||||||    
T  23283943 cagggccgtccctgagaattcagaggctcagttttaggaatgaaaagaggccagtgataaaatcaaaacg 23284012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 41911614 - 41911715
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 199  Q
    ||||| |||||||| | |||  |||||||||||| ||||| |||||| |||||||| |||||||||||||| || ||||| |||| |||||| |||||||    
T  41911614 aaagaacaatgttcaacttaatttttttaaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgagga 41911713  T
Q  200 ac 201  Q
    ||    
T  41911714 ac 41911715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 40389461 - 40389518
Alignment:
Q  26 tccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaa 83  Q
    ||||||||||||||||||||| |||||||||||||||| | | |||||||||||||||    
T  40389461 tccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaa 40389518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 15639724 - 15639645
Alignment:
Q  122 ttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    |||||| ||||||||||| |||||| |||||||||||| |||| |||||| ||||||| |||  ||||||||| ||||||    
T  15639724 tttttttaaagataaatacaaggtgacgtatatatgcgatacatccaaagatgaaaatcactgtcgtatacataaggaac 15639645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 17345053 - 17344969
Alignment:
Q  106 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtat 190  Q
    |||||||||||||| |||||||| |  ||||||| ||| || | | |||||||||||||||||||| | ||||| ||||||||||    
T  17345053 caatgttctatttaaattttttatataataaatacaagatgtcatgtatatgcggtacacccaaagataaaaattactaccgtat 17344969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 606258 - 606211
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtg 146  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||||||    
T  606258 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtg 606211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 15639620 - 15639575
Alignment:
Q  205 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||||    
T  15639620 cacctaacaccaaaagtaagaggacccaattctaataggcctaaaa 15639575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 34425877 - 34425832
Alignment:
Q  205 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||    
T  34425877 cacctaacaccaaaagcaagaggactcaattctaataggcctaaaa 34425832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 15480228 - 15480279
Alignment:
Q  333 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  15480228 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 15480279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 384
Target Start/End: Complemental strand, 19523160 - 19523109
Alignment:
Q  333 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  19523160 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 19523109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 22648860 - 22648899
Alignment:
Q  204 ccacctaacaccaaaagcaagagaacctaattctaatagg 243  Q
    ||||||||||||||||||||||||| | ||||||||||||    
T  22648860 ccacctaacaccaaaagcaagagaatcaaattctaatagg 22648899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 11242447 - 11242489
Alignment:
Q  208 ctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||    
T  11242447 ctaacaccaaaagcaagaggacccaattctaataggcataaaa 11242489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 2024766 - 2024811
Alignment:
Q  205 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||||||||| ||  |||||||||| ||||||||    
T  2024766 cacctaacaccaaaagcaagaggactcaattctaatatgcctaaaa 2024811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 34756615 - 34756664
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  34756615 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 34756664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 35080766 - 35080807
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatat 140  Q
    |||||| ||||||| |||||| ||||||||||||||||||||    
T  35080766 aaaagaacaatgttttatttaaattttttaaaagataaatat 35080807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 18 - 384
Target Start/End: Complemental strand, 32128774 - 32128408
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    |||||||||||||||||||| |||||||| |||||||||||||||| ||| |||||||||||||||||||           |||||||||||||||||||    
T  32128774 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaaaaggtcagtgataaaatcaaaacgtatttttttttaaaagagcaatgttctatt 32128675  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||    
T  32128674 tatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacataagaaacccccacctaacaccaa 32128575  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtg 317  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||        ||||||| ||||||||||||||    
T  32128574 aagcaagaggacctaattctaataggcctaaaagactgaaacaaggggacataaaatggctgggggtattaaaaaaaattggaggacagtaatactagtg 32128475  T
Q  318 ggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||| ||| |||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  32128474 ggtattaaaaaaaaaattgaggtccataactgagggaggcccagctctgttgagctgtttgcacccc 32128408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 18 - 403
Target Start/End: Original strand, 2790659 - 2791044
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| || ||||||||||||||||||| |          |||||| ||||||||||||    
T  2790659 cagggccgtctctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaac-attttttttttaaaagaacaatgttctatt 2790757  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   |||    
T  2790758 tatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaatggcaa 2790857  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtg 317  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||        ||| ||| ||||||||||||||    
T  2790858 aagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacataaaatggctgggggtattaaaaataattgaaggacagtaatactagtg 2790957  T
Q  318 ggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctgatca 403  Q
    ||| || |||| ||| |||| | ||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||    
T  2790958 ggttttcaaaaaaaaattgacgtccatgactgagggagacccagctctgttgagctgtttgcaccccctcagagtcgggcctgatca 2791044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 18 - 381
Target Start/End: Complemental strand, 34027768 - 34027407
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||           |||| ||||||||||||||    
T  34027768 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaa-agcaatgttctatt 34027670  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  34027669 tatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgaggaacccccacctaacaccaa 34027570  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtg 317  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||        |||| |||||||| ||| |  |    
T  34027569 aagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtatt-aaaaaaattggcgggcagtagtaccatag 34027471  T
Q  318 ggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcac 381  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||| ||||||||    
T  34027470 ggtattaaaaaaaaaattgaggcccatgactgagggagacccagctctgttgagcagtttgcac 34027407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 18 - 399
Target Start/End: Complemental strand, 19498691 - 19498313
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||| |||||| ||||||||||||||||           |||||||||||||||||||    
T  19498691 cagggccgtcactaagaattcggaggctcggctctaggaatgaaaacaggccaatgataaaatcaaaacg-tattttgtttaaaagagcaatgttctatt 19498593  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  19498592 tatattttttaaaagataaatataaggtgccgtatat--gcggtacagccaaaggtgaaaatgactactgtatacatgaggaacccccacctaacaccaa 19498495  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtg 317  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||        ||||||||||||| ||||||||    
T  19498494 aagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagataatggctgggggtattaaaaaaaattggagggcagtagtactagtg 19498395  T
Q  318 ggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc-tcagggtcgggcctg 399  Q
    ||||||||||| ||| ||||||||||||| || |||||||||||| |||||||||| |||||||||| |||||| ||||||||    
T  19498394 ggtattaaaaa-aaaattgaggcccatgattgggggaggcccagcactgttgagctatttgcaccccgtcagggccgggcctg 19498313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 17 - 384
Target Start/End: Complemental strand, 16845211 - 16844843
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctat 116  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||||||||           ||||||||||||||||||    
T  16845211 acagggccgtccctaagaattcggaggctcggctctggaaatgaaaaaag-ccagtgataaaatcaaaacg-tattttttttaaaagagcaatgttctat 16845114  T
Q  117 ttatatttttt-aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacc 215  Q
    ||||||||||| ||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  16845113 ttatatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 16845014  T
Q  216 aaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcagtaatacta 314  Q
    ||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||         ||||||| |||||||||||    
T  16845013 aaaagcaagatgacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggtcgggggtattaaaaaaaaattggaggacagtaatacta 16844914  T
Q  315 gtgggta-ttaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16844913 gtgggtatttaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 16844843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 18 - 384
Target Start/End: Original strand, 37777140 - 37777509
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||| ||| |||||||||||||||||||           |||| || |||||||||||    
T  37777140 cagggctgtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttaaaaaaaaagtaatgttctatt 37777239  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  37777240 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccctcaactaacaccaa 37777339  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt--nnnnnnnnttggagggcagtaatactag 315  Q
    ||||||||  ||||||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||          ||||||||||||| ||||||    
T  37777340 aagcaagatgacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatagctggaggtattaaaaaaaaaattggagggcagtagtactag 37777439  T
Q  316 tgggtatt-aaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    |||||||| ||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  37777440 tgggtattaaaaaaaaaaattgaggcccatgattgagggaggtccagctctgttgagctgtttgcacccc 37777509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 17 - 396
Target Start/End: Complemental strand, 40089715 - 40089328
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctat 116  Q
    |||||| ||||||||||||||||||||||| ||||| |||||||||| | | |||||||||||||||||||           |||| ||||||||| |||    
T  40089715 acagggtcgtccctaagaattcggaggctcggctcttggaatgaaaagaagtcagtgataaaatcaaaacgtattttttttaaaaa-agcaatgttttat 40089617  T
Q  117 ttatattt---------tttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccac 207  Q
    ||||||||         |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  40089616 ttatatttatttatatttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccac 40089517  T
Q  208 ctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcag 306  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||         ||||||||||     
T  40089516 ctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgagggtattaaaaaaaaattggagggcac 40089417  T
Q  307 taatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcagggtcgggc 396  Q
    || ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  40089416 tagtactagtgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcatggccgggc 40089328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 382
Target Start/End: Original strand, 16882313 - 16882675
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||| | | |||||||||||||||||||           |||| | ||||||||||||    
T  16882313 cagggccgtccctaagaattcggaggctcggctctaggaatgaaaagaagtcagtgataaaatcaaaacgtatttttttaaaaaaaa-caatgttctatt 16882411  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||| |||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||  ||| ||||| | |||||||||||||    
T  16882412 tatactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtatgtatggggaaccctcacctaacaccaa 16882511  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtg 317  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||        ||||||||||||||||||||||    
T  16882512 aagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatagctgggggtattaaaaaaaattggagggcagtaatactagtg 16882611  T
Q  318 ggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacc 382  Q
    ||||||||||| ||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  16882612 ggtattaaaaa-aaaattgaggctcatgactaagggaagcccagctctgttgagctgtttgcacc 16882675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 396
Target Start/End: Original strand, 54083160 - 54083541
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||||| ||| |||||||||||||||||||           |||| | ||||| ||||||    
T  54083160 cagggccgtccctaaaaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaaa-caatgatctatt 54083258  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| || ||||||||||||    
T  54083259 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgaggaacccctacctaacaccaa 54083358  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt---nnnnnnnnttggagggcagtaatacta 314  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||| |||||||||||||| ||||||||            |||||| ||||| |||||    
T  54083359 aagcaagaggacctaattctaataggcctaaaaggctaaaacaaggagacagaaaatggctaggggtattaaaaaaataaaatggaggacagtagtacta 54083458  T
Q  315 gtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggc 396  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||| |||||    
T  54083459 gtgggtattaaaaaaaaaattgaggcccatgactgagggatgcccagctctattgagctgtttgcaccccctcagggacgggc 54083541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 29 - 318
Target Start/End: Original strand, 43455460 - 43455746
Alignment:
Q  29 ctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttatatttttta 128  Q
    ||||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||           ||||||||||||||||||||||||||||||    
T  43455460 ctaagaattcggaggctcgactctgggaatgaaaagaggtcagtgataaaatcaaaacg-tattatttttaaaagagcaatgttctatttatatttttta 43455558  T
Q  129 aaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaa 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||| |    
T  43455559 aaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccgaaagtaagagga 43455658  T
Q  229 cctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtgg 318  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  43455659 cctaattcaaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt--aaaaaattggagggcagtaatactagtgg 43455746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 99 - 384
Target Start/End: Complemental strand, 24969536 - 24969258
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||    
T  24969536 aaaaaagcaatgatctatttatattttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtatacatgagg 24969447  T
Q  199 aactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt---nnnnnnnn 295  Q
    ||| |||||||||||||||||||||||| | ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||               
T  24969446 aacccccacctaacaccaaaagcaagaggatctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaaaa 24969347  T
Q  296 ttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24969346 ttggagggcagtagtactagtgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 24969258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 24 - 399
Target Start/End: Original strand, 38352189 - 38352554
Alignment:
Q  24 cgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttatatt 123  Q
    ||||||||||||||||||||||| |||||||||||||||| ||  |||||||||||||||||||           |||| || |||| ||||||||||||    
T  38352189 cgtccctaagaattcggaggctcggctctgggaatgaaaagagatcagtgataaaatcaaaacgtatttttttttaaaa-agtaatgatctatttatatt 38352287  T
Q  124 ttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaagcaa 223  Q
    |||||||||||||||||||||||          |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  38352288 ttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtgtacatgaggaacccccacctaacaccaaaagcaa 38352377  T
Q  224 gagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcagtaatactagtgggtat 322  Q
    ||  ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||         ||||| ||||||| |||||||||||||    
T  38352378 gatgacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaattggaaggcagtagtactagtgggtat 38352477  T
Q  323 taaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcagggtcgggcctg 399  Q
    |||        ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38352478 taattttttttttgaggcccatgactaagggaggcccagctctgttgagctgtttgcacccctcagggccgggcctg 38352554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 18 - 268
Target Start/End: Original strand, 34768492 - 34768741
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||| ||||||| ||||||||||||||| ||| |||||||||||| |||| ||||||||||||||||| |          |||||||||||||||||||    
T  34768492 cagggtcgtccctgagaattcggaggctcggctttgggaatgaaaagaggctagtgataaaatcaaaac-atattttttttaaaagagcaatgttctatt 34768590  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||    
T  34768591 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatgaggaacccccacctaacaccaa 34768690  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggaca 268  Q
    || |||||| | ||||||||||||  ||||||||  ||||||||| |||||    
T  34768691 aatcaagaggaactaattctaataatcctaaaaggctaaaacaagaggaca 34768741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 22 - 275
Target Start/End: Complemental strand, 47129172 - 47128920
Alignment:
Q  22 gccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttata 121  Q
    ||||||||| ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| |           |||||| ||||||||||||||||    
T  47129172 gccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatg-tattttttttaaaagaacaatgttctatttata 47129074  T
Q  122 ttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaagc 221  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| |    
T  47129073 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatc 47128974  T
Q  222 aagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    ||||| | ||||||||||||  ||||||||  ||||||||| ||||||||||||    
T  47128973 aagaggaactaattctaataatcctaaaaggctaaaacaagaggacagaaaatg 47128920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 54780969 - 54780771
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaatgttcta 115  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||| ||||||||||||||||||||||| |          |||||||||||||||||    
T  54780969 acagggccgtccctgagaattcggaggcttggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttcta 54780870  T
Q  116 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacac 214  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  54780869 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 54780771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 10979092 - 10978833
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnn--aaaagagcaatgttcta 115  Q
    |||||||||| || |||||||||||| | ||||||||||||||||| |||  ||||||||||||||||||             |||||||||||||||||    
T  10979092 cagggccgtctctgagaattcggaggtttagctctgggaatgaaaagaggttagtgataaaatcaaaacgtatttttttttttaaaagagcaatgttcta 10978993  T
Q  116 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacc 215  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||    
T  10978992 tttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgaggaacccccacctaacacc 10978893  T
Q  216 aaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    |||| |||||| | ||||||||||||  ||||||||  ||||||||| | ||||||||||    
T  10978892 aaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagagaacagaaaatg 10978833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 17 - 219
Target Start/End: Complemental strand, 32915576 - 32915374
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctat 116  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||           |||||||| |||||||||    
T  32915576 acagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacggttttttttttaaaagagcgatgttctat 32915477  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  32915476 ttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgaggaacccccacctaacacca 32915377  T
Q  217 aaa 219  Q
    |||    
T  32915376 aaa 32915374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 32 - 252
Target Start/End: Original strand, 38209522 - 38209742
Alignment:
Q  32 agaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttatattttttaaaa 131  Q
    |||||| |||||||| ||||||| |||||||| |||||||||||||||||||||              ||||||||||||||||||||||||||||||||    
T  38209522 agaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatataatttttttttaaagagcaatgttctatttatattttttaaaa 38209621  T
Q  132 gataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacct 231  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | ||    
T  38209622 gataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 38209721  T
Q  232 aattctaataggcctaaaaga 252  Q
    ||||||||||  |||||||||    
T  38209722 aattctaataatcctaaaaga 38209742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 48209436 - 48209173
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaa-----atcaaaacg-annnnnnnnnnaaaagagcaatgt 111  Q
    ||||||||||||| ||||||||||||||| ||||||||| |||||| || |||||||||||     ||||||||| |          |||||||||||||    
T  48209436 cagggccgtccctgagaattcggaggctcggctctgggagtgaaaagagaccagtgataaattaaaatcaaaacgtattttttttttaaaagagcaatgt 48209337  T
Q  112 tctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaa 211  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||| |||||||||||||||||||| ||| |||||||||    
T  48209336 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgagaaacccccacctaa 48209237  T
Q  212 caccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    |||||||| |||||  | ||||||||||||  |||| |||  ||||||||| ||||||||||||    
T  48209236 caccaaaatcaagaagaactaattctaataatcctataaggctaaaacaagaggacagaaaatg 48209173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 32 - 275
Target Start/End: Complemental strand, 35465281 - 35465040
Alignment:
Q  32 agaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttatattttttaaaa 131  Q
    |||||||||||||||   |||||||||||||| ||| |||||||||||||||||| |          |||||| ||||||| ||||||||||||||| ||    
T  35465281 agaattcggaggctcgattctgggaatgaaaagaggtcagtgataaaatcaaaac-atattttttttaaaagaacaatgttatatttatattttttacaa 35465183  T
Q  132 gataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacct 231  Q
    |||||||| ||||||| |||||||||||||||||| ||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||| |  ||||    
T  35465182 gataaataaaaggtgc-gtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgaggaatccccacctaacaccaaaagcaacatgacct 35465084  T
Q  232 aattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||    
T  35465083 aattctaataggcctaaaaggctaaaacaagaggacagaaaatg 35465040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 21 - 275
Target Start/End: Original strand, 35779248 - 35779499
Alignment:
Q  21 ggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttat 120  Q
    |||||||| | |||||||||||| ||  |||  |||||||||| |||| ||||||||||||||||||            |||||||||||||||||| ||    
T  35779248 ggccgtccttgagaattcggaggttcgactcgaggaatgaaaagaggctagtgataaaatcaaaacgtatttttttt--aaagagcaatgttctatt-at 35779344  T
Q  121 attttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaag 220  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||   ||||||||| ||||||    
T  35779345 attttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaaccttcacctaacatcaaaag 35779444  T
Q  221 caagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    |||||| | ||||||||||||||||||||||  ||||||||| || |||||||||    
T  35779445 caagaggaactaattctaataggcctaaaaggctaaaacaagagggcagaaaatg 35779499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 17 - 219
Target Start/End: Complemental strand, 37514849 - 37514648
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaatgttcta 115  Q
    |||||||||||||| |||||| |||||||||||   ||||||||||| ||||||||||||||||||||||| |           ||||||| ||||||||    
T  37514849 acagggccgtccctgagaatttggaggctcagcg--gggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttttaaagagcgatgttcta 37514752  T
Q  116 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacc 215  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||  |||||||||||||    
T  37514751 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaagaatccccacctaacacc 37514652  T
Q  216 aaaa 219  Q
    ||||    
T  37514651 aaaa 37514648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 5128758 - 5128960
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatc-aaaacgannnnnnnnnnaaaagagcaatgttctat 116  Q
    ||||||||||||| ||||||  ||||||| |||||||||||||||| ||||||||||||||||| ||||||           | |||||| || ||||||    
T  5128758 cagggccgtccctgagaatttagaggctcggctctgggaatgaaaagaggccagtgataaaatctaaaacgtttttttttttagaagagcgatattctat 5128857  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    ||||||||||||||||||||||| |||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  5128858 ttatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaacctccacctaacacca 5128957  T
Q  217 aaa 219  Q
    |||    
T  5128958 aaa 5128960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 17 - 275
Target Start/End: Original strand, 10428115 - 10428379
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctat 116  Q
    ||||||||||||   ||||||||||||||| |||||||||||||||| ||| ||||| |||||||||||             |||||  |||||||||||    
T  10428115 acagggccgtcctcgagaattcggaggctcggctctgggaatgaaaagaggtcagtgctaaaatcaaaatttattttttttaaaaag--caatgttctat 10428212  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaag--------gtgaaaatgactaccgtatacatgaggaactcccacc 208  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||||||  |||||    
T  10428213 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaattgtgaaaatgactaccgtatacatgaggaacctccacc 10428312  T
Q  209 taacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    ||||||||||| |||||| | |||||| |||||  ||||||||  ||||||||| ||||||||||||    
T  10428313 taacaccaaaatcaagaggaactaattataataatcctaaaaggctaaaacaagaggacagaaaatg 10428379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 109 - 275
Target Start/End: Complemental strand, 13460306 - 13460140
Alignment:
Q  109 tgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacc 208  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||| | ||||||||||||||||||||||| |||||| ||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaacccccacc 13460207  T
Q  209 taacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    ||||||||||| |||||| | ||||||||||||  ||||||||  |||||||||  |||||||||||    
T  13460206 taacaccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagaagacagaaaatg 13460140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 22 - 219
Target Start/End: Complemental strand, 1105717 - 1105521
Alignment:
Q  22 gccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttata 121  Q
    ||||||| | ||||||| ||||||| |||||||||||||||| ||| |||||||||||||||||||           |||||||  ||||||||||||||    
T  1105717 gccgtccttgagaattcagaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg-tattttttttaaaagagtgatgttctatttata 1105619  T
Q  122 ttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaa 219  Q
    |||||||||||||||||| |||||  ||||||||||||||||||| | ||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  1105618 ttttttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgagcaacccccacctaacaccaaaa 1105521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 55255447 - 55255225
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| ||||||  |||||||| ||||||||||||||||||||||            ||||||||||||||| |||    
T  55255447 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttccatt 55255348  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||||||             |||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  55255347 tatattttttaaaagataaatacaaggtgccgc------------cacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 55255260  T
Q  218 aagcaagagaacctaattctaataggcctaaaaga 252  Q
    || |||||| | ||||||||||||  |||||||||    
T  55255259 aatcaagaggaactaattctaataatcctaaaaga 55255225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 17679589 - 17679432
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    |||||||||| || ||||||||||||||| | |||||||||||||| || ||||||||||||||||||||           ||||||||||| |||||||    
T  17679589 cagggccgtctctgagaattcggaggctcggttctgggaatgaaaagagaccagtgataaaatcaaaacg-tattttttttaaaagagcaatattctatt 17679491  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaa 176  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  17679490 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 17679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 23509846 - 23509972
Alignment:
Q  149 gtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaa 248  Q
    |||||||||||||||||| | |||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| | ||||||||||||  |||||    
T  23509846 gtatatatgcggtacacctagaggtgaaaatgactaccgtagacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 23509945  T
Q  249 aagattaaaacaaggggacagaaaatg 275  Q
    |||  ||||||||| ||||||||||||    
T  23509946 aaggctaaaacaagaggacagaaaatg 23509972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 16922245 - 16922409
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnn-aaaagagcaatgttctat 116  Q
    ||||||||||||| |||||| ||||||||  || |||||||||||| || ||||||||||||||||||||            ||||||||||||||||||    
T  16922245 cagggccgtccctgagaatttggaggctcgactttgggaatgaaaagagaccagtgataaaatcaaaacgttttttatttttaaaagagcaatgttctat 16922344  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatga 181  Q
    |||||||||||||||||||||||||| ||| ||||||||||| |||  |||||||||||||||||    
T  16922345 ttatattttttaaaagataaatataaagtgtcgtatatatgcagtatccccaaaggtgaaaatga 16922409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 52468395 - 52468293
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||   |||| |||||||||||||| |||||||||| |||||||    
T  52468395 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgagg 52468296  T
Q  199 aac 201  Q
    |||    
T  52468295 aac 52468293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 4167910 - 4167991
Alignment:
Q  120 tattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||    
T  4167910 tattttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaac 4167991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 34 - 180
Target Start/End: Complemental strand, 51964884 - 51964736
Alignment:
Q  34 aattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttatatttttt---aaa 130  Q
    ||||||||| ||| |||||||||||||||| |||||  ||||||||||||||||           |||||||||||||||||||||||||||||   |||    
T  51964884 aattcggagactcggctctgggaatgaaaagaggccgatgataaaatcaaaacg-tattttttttaaaagagcaatgttctatttatattttttttaaaa 51964786  T
Q  131 agataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatg 180  Q
    ||||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  51964785 agataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatg 51964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 24397043 - 24396941
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||| || |||||| ||||||||||||||||||||||||||| ||||||||| | ||||| ||||||||||||| |||| |||||||||||||    
T  24397043 aaaagaacaatattttatttaaattttttaaaagataaatataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgagg 24396944  T
Q  199 aac 201  Q
    |||    
T  24396943 aac 24396941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 51691913 - 51692009
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacc--caaaggtgaaaatgactaccgtataca 193  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||   ||| |||||||| |||||| ||||||    
T  51691913 aaaagagcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacaccaaaaaaagtgaaaatcactaccatataca 51692009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 106 - 201
Target Start/End: Complemental strand, 27112132 - 27112037
Alignment:
Q  106 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    |||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| ||| |||||||| |||||||||||||||||||||    
T  27112132 caatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaac 27112037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 36118463 - 36118554
Alignment:
Q  106 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    |||||||||||||| ||||||||||||||||||| |||||| |||||||||| | ||||||||||  ||||||| |||||||||||||||||    
T  36118463 caatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgag 36118554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 36178774 - 36178684
Alignment:
Q  106 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatga 196  Q
    |||||||||||||| ||| ||||||||||||||| |||||| |||||||||||| |||||||||| |||||||| |||||| |||||||||    
T  36178774 caatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatga 36178684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 108 - 201
Target Start/End: Original strand, 37744916 - 37745010
Alignment:
Q  108 atgttctatttatatttt-ttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    |||||||||||| ||||| ||||||||||||||||||||| || ||||||||| |||| |||||||||||||| |||||||||||| ||||||||    
T  37744916 atgttctatttaaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaac 37745010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 39655252 - 39655332
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaat 179  Q
    |||||| |||||||||||||| ||||||||||||||||||| || || ||| |||||||||||||||||||||||||||||    
T  39655252 aaaagaacaatgttctatttaaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaat 39655332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 10041998 - 10042100
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| |||||| |||| ||||||| |||||||||||| |||| | |||||| ||| |||||||| ||||||||||||| ||||    
T  10041998 aaaagaacaatgttctatttaaatttttaaaaaaataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtatacaggagg 10042097  T
Q  199 aac 201  Q
    |||    
T  10042098 aac 10042100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 106 - 201
Target Start/End: Original strand, 2135326 - 2135421
Alignment:
Q  106 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    |||| ||||||||| ||||||||||||||||||| |||||| |||||||||||| |||| |||||||| || || |||| |||||| |||||||||    
T  2135326 caatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatccaaaggtaaacatcactatcgtatatatgaggaac 2135421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 9578575 - 9578728
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaa-----atcaaaacg-annnnnnnnnnaaaagagcaatgt 111  Q
    ||||||||||| | |||||||||||||||  |||||||| |||||| |||| |||||||||     ||||||||| |          |||||||||||||    
T  9578575 cagggccgtccttgagaattcggaggctcgactctgggagtgaaaagaggcaagtgataaattaaaatcaaaacgtatttcttttttaaaagagcaatgt 9578674  T
Q  112 tctatttatattttttaaaagataaatataaggt-gccgtatatatgcggtaca 164  Q
    |||||||||||||||||||||||||||| ||||| ||| |||||||||||||||    
T  9578675 tctatttatattttttaaaagataaatacaaggtagccatatatatgcggtaca 9578728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 39329390 - 39329492
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| ||||||||| |||| ||||||||||||||||||| ||||||  ||||||||| | ||||||||||| |||||||   ||||||||||| ||||    
T  39329390 aaaagaacaatgttctctttaaattttttaaaagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtatacaggagg 39329489  T
Q  199 aac 201  Q
    |||    
T  39329490 aac 39329492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 24969786 - 24969717
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg 87  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| |||| |||||||||| |||||||    
T  24969786 cagggccgtccctaagaattcggaggctcgactctgggaatgaaaagaggctagtgataaaaacaaaacg 24969717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 40217327 - 40217243
Alignment:
Q  113 ctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||| |||| |||||| ||||||| | || | ||||||||||    
T  40217327 ctatttaaattttttaaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaatcattagcatatacatgag 40217243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 34 - 154
Target Start/End: Original strand, 23508443 - 23508564
Alignment:
Q  34 aattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttat-attttttaaaag 132  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||||||||| |            || |||||||||||||||||| ||||||||||||    
T  23508443 aattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaatgtattttttttttaatgagcaatgttctatttataattttttaaaag 23508542  T
Q  133 ataaatataaggtgccgtatat 154  Q
    ||||||| |||||| |||||||    
T  23508543 ataaatacaaggtgtcgtatat 23508564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 36362869 - 36362964
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacat 194  Q
    |||||| ||||| ||| |||| ||||||||||||||||||| || |||||||||||||||  |||||||||| ||| |||| |||||| |||||||    
T  36362869 aaaagaacaatgctctgtttaaattttttaaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaatcactaccatatacat 36362964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 29425187 - 29425252
Alignment:
Q  114 tatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaat 179  Q
    |||||| ||||||||||| |||||||||||||||||||||||||| |||||   ||||||||||||    
T  29425187 tatttaaattttttaaaaaataaatataaggtgccgtatatatgcagtacatttaaaggtgaaaat 29425252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 201
Target Start/End: Complemental strand, 45656277 - 45656182
Alignment:
Q  106 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    ||||||| |||||| ||||||||||||||||||  |||||| | |||||||||| || | ||||| |||||||| || | ||||||||||| ||||    
T  45656277 caatgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatgcgataaatccaaatgtgaaaatcacgaacgtatacatgacgaac 45656182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 325 - 383
Target Start/End: Complemental strand, 35464016 - 35463958
Alignment:
Q  325 aaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccc 383  Q
    |||| ||| |||| ||||||| ||| |||||||||||||||||||||||||||||||||    
T  35464016 aaaaaaaaattgatgcccatggctgggggaggcccagctctgttgagctgtttgcaccc 35463958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 36118584 - 36118632
Alignment:
Q  204 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 252  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  36118584 ccacctaacaccaaaagcaagatgacccaattctaataggcctaaaaga 36118632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 37746847 - 37746894
Alignment:
Q  203 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||||    
T  37746847 cccacctaacaccaaaagcaagatgacccaattctaataggcctaaaa 37746894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 15735189 - 15735101
Alignment:
Q  109 tgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaact 202  Q
    ||||||||||| ||||||||||||||||||| |||  | |||||||||     ||||| |||  ||||||| | ||||||||||||||||||||    
T  15735189 tgttctatttaaattttttaaaagataaatacaagacgtcgtatatat-----acaccaaaaaatgaaaatcattaccgtatacatgaggaact 15735101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 351 - 399
Target Start/End: Complemental strand, 54779490 - 54779441
Alignment:
Q  351 gggaggcccagctctgttgagctgtttgcac-ccctcagggtcgggcctg 399  Q
    |||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  54779490 gggaggcccagctcggttgagctgtttgcactccctcagggccgggcctg 54779441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 2135447 - 2135491
Alignment:
Q  206 acctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    ||||||||||||||||||||| ||| |||||||||| ||||||||    
T  2135447 acctaacaccaaaagcaagaggacccaattctaataagcctaaaa 2135491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 30507120 - 30507160
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaata 139  Q
    |||||| |||||||||||||| |||||||||||||||||||    
T  30507120 aaaagaacaatgttctatttaaattttttaaaagataaata 30507160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 335 - 387
Target Start/End: Original strand, 38209842 - 38209894
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctca 387  Q
    ||||||||||   |||||||||||||||||  |||||||||||||||||||||    
T  38209842 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccctca 38209894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 384
Target Start/End: Complemental strand, 1105498 - 1105447
Alignment:
Q  333 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  1105498 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 1105447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 384
Target Start/End: Original strand, 10431421 - 10431492
Alignment:
Q  313 tagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    |||||||||| ||||| |   |||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  10431421 tagtgggtataaaaaatatttttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 10431492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 139
Target Start/End: Complemental strand, 24614061 - 24614022
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaata 139  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  24614061 aaagaacaatgttctatttaaattttttaaaagataaata 24614022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 384
Target Start/End: Original strand, 35780532 - 35780606
Alignment:
Q  309 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    |||||| ||| ||||||||| ||| |||||||| ||   || |||||||||||||| |||||||||||||||||||    
T  35780532 atactactggatattaaaaaaaaa-ttgaggcctatccgtgggggaggcccagctcggttgagctgtttgcacccc 35780606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 39329518 - 39329565
Alignment:
Q  203 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    ||||| |||||||||||||||||  ||| |||||||||||||||||||    
T  39329518 cccacataacaccaaaagcaagaagaccaaattctaataggcctaaaa 39329565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 348 - 390
Target Start/End: Original strand, 9579483 - 9579525
Alignment:
Q  348 tgagggaggcccagctctgttgagctgtttgcacccctcaggg 390  Q
    |||||||||||||||||  ||||||||||||||| ||||||||    
T  9579483 tgagggaggcccagctcgtttgagctgtttgcacgcctcaggg 9579525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 348 - 390
Target Start/End: Original strand, 9585178 - 9585220
Alignment:
Q  348 tgagggaggcccagctctgttgagctgtttgcacccctcaggg 390  Q
    |||||||||||||||||  ||||||||||||||| ||||||||    
T  9585178 tgagggaggcccagctcgtttgagctgtttgcacgcctcaggg 9585220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 204 - 250
Target Start/End: Complemental strand, 15735076 - 15735030
Alignment:
Q  204 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    ||||||||||||||||||||||  ||| |||||||| ||||||||||    
T  15735076 ccacctaacaccaaaagcaagaagacccaattctaacaggcctaaaa 15735030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 30507199 - 30507245
Alignment:
Q  204 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    ||||||||||||||||||||||| ||  |||||| ||||||||||||    
T  30507199 ccacctaacaccaaaagcaagaggactcaattcttataggcctaaaa 30507245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 45560704 - 45560754
Alignment:
Q  334 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    |||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  45560704 ttgaggcccatctttgagggaggcccagctcgtttgagctgtttgcacccc 45560754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 36178652 - 36178607
Alignment:
Q  205 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||||||||| |||  |||||||| |||||||||    
T  36178652 cacctaacaccaaaagcaagaggacccgattctaatgggcctaaaa 36178607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 40217209 - 40217164
Alignment:
Q  205 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    ||||||||||||||||||| |  ||| |||||||||||||||||||    
T  40217209 cacctaacaccaaaagcaaaatgacccaattctaataggcctaaaa 40217164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Complemental strand, 55255145 - 55255096
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  55255145 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 55255096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 235; Significance: 1e-129; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 18 - 399
Target Start/End: Original strand, 47984885 - 47985268
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnn-aaaagagcaatgttctat 116  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||| | |||||||||||||||||||||            |||| |||||||||||||    
T  47984885 cagggccgtccctaagaattcgttggctcggctctgggaatgaaaagatgccagtgataaaatcaaaacgtgttttttttttaaaaaagcaatgttctat 47984984  T
Q  117 ttatatttt-ttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacc 215  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||     
T  47984985 ttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgaggaacccccacctaacaca 47985084  T
Q  216 aaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactag 315  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||    
T  47985085 aaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggctggggatattaaaaaaaattggagggcagtaatactag 47985184  T
Q  316 tgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 399  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  47985185 tgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggccgggcctg 47985268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 17 - 399
Target Start/End: Original strand, 20091196 - 20091579
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaatgttcta 115  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||| |          |||| | ||||| ||||    
T  20091196 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaaaaaacaatgatcta 20091295  T
Q  116 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20091296 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 20091395  T
Q  216 aaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcagtaatacta 314  Q
    ||||| ||||| ||||||||||||||||||||||||  ||||||||||| ||| ||||||| ||||||||||         ||||||||||||| ||||     
T  20091396 aaaagtaagaggacctaattctaataggcctaaaaggctaaaacaagggtacataaaatggttgggggtattaaaaaaaaattggagggcagtagtactg 20091495  T
Q  315 gtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcagggtcgggcctg 399  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  20091496 gtgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctattgagctgtttgcaccccccagggacgggcctg 20091579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 17 - 400
Target Start/End: Original strand, 10329326 - 10329710
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctat 116  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||           |||| |||||||||||||    
T  10329326 acagggccgttcctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaagcaatgttctat 10329425  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    ||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  10329426 ttatattttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaacccccacttaacacca 10329525  T
Q  217 aaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagt 316  Q
    |||||||||| ||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||        ||||||||||||| |||||||    
T  10329526 aaagcaagaggacctaattctaataggcgtaaaaggctaaaacaaggggacaaaaaatggctgggggtattaaaaaatattggagggcagtagtactagt 10329625  T
Q  317 gggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctga 400  Q
    |||||||||||| ||| |||||||||||||||||||||| || ||| ||||||| ||||||||| |||||||||  |||||||||    
T  10329626 gggtattaaaaaaaaaattgaggcccatgactgagggagacctagcgctgttgaactgtttgcaccccctcaggaccgggcctga 10329710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 18 - 400
Target Start/End: Complemental strand, 19692279 - 19691896
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||| |||||||||||||||| |||| ||||||| ||||||||  | ||||||||||||||||||||           |||||||||||||||||||    
T  19692279 cagggccctccctaagaattcggaagctcggctctggaaatgaaaagtgtccagtgataaaatcaaaacgtatttttttttaaaagagcaatgttctatt 19692180  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  |||||||||||||||| | | |||||||||||    
T  19692179 tatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgaggaaccctcgcctaacaccaa 19692080  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtg 317  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||         |||||| |||||||||||||     
T  19692079 aagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggttgggggtattaaaaaaaaatggaggacagtaatactagtt 19691980  T
Q  318 ggtattaaaaacaaacttgaggccca-tgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctga 400  Q
    ||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19691979 ggtattaaaaa-aaaattgaggcccattgactgagggaggcccagctctgttgagctgtttgcaccccctcagggtcgggcctga 19691896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 18 - 384
Target Start/End: Original strand, 24525599 - 24525968
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaa---aagagcaatgttct 114  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||                || | |||||||||    
T  24525599 cagggtcgtccctaagaattcggaggctcggctctgggaatgaaaagaggcctgtgataaaatcaaaacgtattttttttttttttaaaaacaatgttct 24525698  T
Q  115 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacac 214  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  24525699 atttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacctaacac 24525798  T
Q  215 caaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatacta 314  Q
    |||||||||||| |||||||||||||| |||||||||  |||||||||||| |||||||||||||||||||||        ||||||||||||| |||||    
T  24525799 caaaagcaagaggacctaattctaatatgcctaaaaggctaaaacaagggggcagaaaatggctgggggtattaaaaaaaattggagggcagtagtacta 24525898  T
Q  315 gtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    |||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24525899 gtgggtattaaaaaaaaaattgaggcccatgactaagggaggcccagctctgttgagctgtttgcacccc 24525968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 18 - 400
Target Start/End: Original strand, 38414793 - 38415175
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||| |||||||||||||||||||||||  |||||| |||||||| || | ||| ||||||||||||||           |||||||||| ||||||||    
T  38414793 cagggtcgtccctaagaattcggaggctcgactctggaaatgaaaagagactagtcataaaatcaaaacgtatttttttgcaaaagagcaacgttctatt 38414892  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    | ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  38414893 tgtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccacctaacaccaa 38414992  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtg 317  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||| | |||||||||||| |||||||        |||||||||| |||||||||||    
T  38414993 aagcaagaggacctaattctaataggcctaaaagactaaaacaagggaatagaaaatggctgagggtattaaaaaaaattggagggcaataatactagtg 38415092  T
Q  318 ggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctga 400  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  38415093 ggtattaaaaa-aaatttgaggcccatgactaagggaggcccagctctgttgagctgtttgcatcccctcagagccgggcctga 38415175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 18 - 384
Target Start/End: Original strand, 23550988 - 23551355
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| |          |||| ||||||| ||||||    
T  23550988 cagggtcgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaac-atatttttttaaaaaaagcaatgatctatt 23551086  T
Q  118 tatatttt-ttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23551087 tatatttttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 23551186  T
Q  217 aaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcagtaatactag 315  Q
    |||||||||| |||||||||||||||||||||||   ||||||||||||||| ||||||||| ||||||||         ||||||||||||| ||||||    
T  23551187 aaagcaagaggacctaattctaataggcctaaaaagctaaaacaaggggacaaaaaatggctaggggtattaaattttttttggagggcagtagtactag 23551286  T
Q  316 tgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||||| ||| ||||||||||||| ||||||||| ||| |||| ||||||||||||||||||    
T  23551287 tgggtattaaaaaaaaaattgaggcccatgattgagggaggtccaactctattgagctgtttgcacccc 23551355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 384
Target Start/End: Original strand, 48983756 - 48984127
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnn-----aaaagagcaatgtt 112  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||||||||||                |||| | ||||| |    
T  48983756 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacgtatttttttttttttaaaaaaaacaatgat 48983855  T
Q  113 ctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaac 212  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  48983856 ctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgaggaacccccacctaac 48983955  T
Q  213 accaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcagtaata 311  Q
    |||||||| ||||| || |||||||||||||||||||||  ||||||||||| ||| ||||||| ||||||||||         ||||||||||||| ||    
T  48983956 accaaaagtaagaggacttaattctaataggcctaaaaggctaaaacaagggtacaaaaaatggttgggggtattaaaaaaaaattggagggcagtagta 48984055  T
Q  312 ctagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48984056 ctagtgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 48984127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 20 - 349
Target Start/End: Complemental strand, 8239869 - 8239539
Alignment:
Q  20 gggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctattta 119  Q
    |||||||||||||||||| |||||||| ||||||| |||||||| |||||| ||||||||| ||||||           ||||||| |||||||||||||    
T  8239869 gggccgtccctaagaatttggaggctcggctctggaaatgaaaagaggccaatgataaaatgaaaacg-tattttttttaaaagagtaatgttctattta 8239771  T
Q  120 tattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactc--ccacctaacaccaa 217  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||| ||||||||| ||||||||| |  |||| |||||||||    
T  8239770 tattttttaaaaaataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgaggaacccctccacttaacaccaa 8239671  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtg 317  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||||||||  |||||| ||||||||||        || ||||||| || ||||| ||    
T  8239670 aagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacaacaaatggttgggggtattaaaaaaaattagagggcattagtactaatg 8239571  T
Q  318 ggtattaaaaacaaacttgaggcccatgactg 349  Q
    ||||||||||| ||| | ||||||||||||||    
T  8239570 ggtattaaaaaaaaaatcgaggcccatgactg 8239539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 21 - 268
Target Start/End: Original strand, 8171460 - 8171706
Alignment:
Q  21 ggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttat 120  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||||||| ||           ||||||||||||||||||||||    
T  8171460 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaagcg-tattttttttaaaagagcaatgttctatttat 8171558  T
Q  121 attttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaag 220  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||     
T  8171559 attttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaat 8171658  T
Q  221 caagagaacctaattctaataggcctaaaagattaaaacaaggggaca 268  Q
    |||||| | ||||||||||||  ||||||||  ||||||||| |||||    
T  8171659 caagaggaactaattctaataatcctaaaaggctaaaacaagaggaca 8171706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 18 - 239
Target Start/End: Complemental strand, 29077404 - 29077184
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||           |||||||||||||||||||    
T  29077404 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg-tattttttttaaaagagcaatgttctatt 29077306  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||    
T  29077305 tatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 29077206  T
Q  218 aagcaagagaacctaattctaa 239  Q
    || |||||| | ||||||||||    
T  29077205 aatcaagaggaactaattctaa 29077184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 18776683 - 18776917
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||| ||| |||||||||||||||||             |||||||||||||||||||    
T  18776683 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaatataattttttttaaaagagcaatgttctatt 18776782  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||| |||||||||||||||    
T  18776783 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgagaaacccccacctaacaccaa 18776882  T
Q  218 aagcaagagaacctaattctaataggcctaaaaga 252  Q
    || |||||| | ||||||||||||  |||||||||    
T  18776883 aaacaagaggaactaattctaataatcctaaaaga 18776917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 16 - 265
Target Start/End: Complemental strand, 25010613 - 25010371
Alignment:
Q  16 tacagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaatgttct 114  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||| |          |||| ||||||| |||    
T  25010613 tacagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacgtattttttaaaaaaaaaagcaatgatct 25010514  T
Q  115 atttatatttttt--aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaac 212  Q
    |||||||||||||  |||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25010513 atttatattttttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 25010424  T
Q  213 accaaaagcaagagaacctaattctaataggcctaaaagattaaaacaagggg 265  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  25010423 accaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaagggg 25010371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 12596207 - 12596405
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||            ||||||| ||||||||||    
T  12596207 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgttttttttt---aaagagcgatgttctatt 12596303  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  12596304 tatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacctaacaccaa 12596403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 99 - 219
Target Start/End: Complemental strand, 10955588 - 10955468
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  10955588 aaaagagcgatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgagg 10955489  T
Q  199 aactcccacctaacaccaaaa 219  Q
    ||| |||||||||||||||||    
T  10955488 aacccccacctaacaccaaaa 10955468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 26254178 - 26254015
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    |||||| |||||| ||||||||||||||| ||| |||||||||||| ||| ||||||||||||||||||            |||||||||||||||||||    
T  26254178 cagggctgtccctgagaattcggaggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacatatttttttttaaaagagcaatgttctatt 26254079  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatga 181  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  26254078 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaatga 26254015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 28749895 - 28749715
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaatgttctat 116  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||| || ||| |||||||||||||||  |          ||||||||||| ||||||    
T  28749895 cagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccaatgataaaatcaaaacatatttttttttcaaaagagcaatattctat 28749796  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||| || | |||||||| ||||||||||||||||||    
T  28749795 ttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgagg 28749715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 100 - 199
Target Start/End: Original strand, 9021799 - 9021898
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 199  Q
    ||||| |||| | ||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9021799 aaagaacaatttgctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgagga 9021898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 33162338 - 33162418
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatg 180  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  33162338 aaagagcaatgctctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatg 33162418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 296 - 398
Target Start/End: Complemental strand, 25010356 - 25010254
Alignment:
Q  296 ttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgg 394  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||| |||    
T  25010356 ttggagggcagtagtactagtgggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccaactctgttgagctgtttgtaccccctcagggccgg 25010258  T
Q  395 gcct 398  Q
    ||||    
T  25010257 gcct 25010254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 2611260 - 2611362
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||| || || ||||||||||||    
T  2611260 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgagg 2611359  T
Q  199 aac 201  Q
    |||    
T  2611360 aac 2611362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 107 - 199
Target Start/End: Complemental strand, 23859169 - 23859077
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 199  Q
    ||||||||||||| ||||||||||||||||||| || || ||||||||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  23859169 aatgttctatttaaattttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgagga 23859077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 7398555 - 7398453
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| ||||||| ||||||||||| |||||||| |||||||| | |||||| |||||||||||| |||||| |||||||||||    
T  7398555 aaaagaacaatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgagg 7398456  T
Q  199 aac 201  Q
    |||    
T  7398455 aac 7398453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 100 - 191
Target Start/End: Original strand, 6765680 - 6765771
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtata 191  Q
    ||||| |||||||||||||| ||||||||||||||||||| |||||| |||||||| || ||||| |||||||||||||| |||||||||||    
T  6765680 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtata 6765771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 36891674 - 36891580
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    |||||||||||||||||||||||| ||| |||| || |||  |||||||| ||||||| |||||||||||||| |||||||||||||||||||||    
T  36891674 aatgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaac 36891580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 23744900 - 23744808
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtata 191  Q
    |||||| |||||||||| ||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||| | ||||| |||||||||||    
T  23744900 aaaagaacaatgttctaattaaattttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 12981422 - 12981328
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    |||||||||||||  |||||||||||||||||| ||||| || |||||| ||||||||| ||||||||||||| ||||| ||||| |||||||||    
T  12981422 aatgttctatttaatttttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgaggaac 12981328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 23020498 - 23020584
Alignment:
Q  115 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaact 202  Q
    ||||| ||||||||||||||||||||||||||  ||||||||||   |||| ||||||||||||| ||||||||||||||||||||||    
T  23020498 atttagattttttaaaagataaatataaggtgttgtatatatgcac-acactcaaaggtgaaaatcactaccgtatacatgaggaact 23020584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 27237421 - 27237523
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||||||  ||||||||| | |  | | |||||||||||| |||| |||||||||||||    
T  27237421 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgagg 27237520  T
Q  199 aac 201  Q
    |||    
T  27237521 aac 27237523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 36902924 - 36903022
Alignment:
Q  101 aagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 199  Q
    |||| |||||||||||||| ||||||||| ||||||||| ||| || ||||||||||  ||||||| |||||||||||| | ||| |||||||||||||    
T  36902924 aagaacaatgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaatcagtactgtatacatgagga 36903022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 20153297 - 20153206
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||| ||||||||||||||||||| || |||  ||||||||||| || |||||||| ||||||| ||| ||||||||||||||    
T  20153297 aatgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgagg 20153206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 12419493 - 12419595
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| ||||||||||||||||||| || || || ||||| || | |||| |||||| ||||||| ||||  | ||||||||||    
T  12419493 aaaagaacaatgttctatttaaattttttaaaagataaatacaatgtaccttatatgtgtgatacatccaaagatgaaaatcactattgaatacatgagg 12419592  T
Q  199 aac 201  Q
    |||    
T  12419593 aac 12419595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 186
Target Start/End: Original strand, 21763586 - 21763672
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactacc 186  Q
    ||||| || ||||||||||| ||||||||||||||||||| || ||  |||||||||||| |||||| ||| |||||||| ||||||    
T  21763586 aaagaacattgttctatttaaattttttaaaagataaatacaaagtatcgtatatatgcgatacaccaaaaagtgaaaatcactacc 21763672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 201
Target Start/End: Complemental strand, 18201234 - 18201139
Alignment:
Q  106 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    ||||| |||||||| ||||||||||| ||||||| ||| |||| |||||||| |||||||| || |||||||||   |||| || |||||||||||    
T  18201234 caatgatctatttaaattttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaatcgttaccttacacatgaggaac 18201139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 40357311 - 40357366
Alignment:
Q  32 agaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg 87  Q
    ||||||||||||||| ||||||| |||||||| ||| |||||||||||||||||||    
T  40357311 agaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaacg 40357366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 17800348 - 17800394
Alignment:
Q  204 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  17800348 ccacctaacaccaaaagcaagaggacccaattctaataggcctaaaa 17800394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 38971333 - 38971255
Alignment:
Q  123 tttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    ||||||||||||||||| |||||| ||||||||||   |||||| ||| |||||||| ||||||||| ||| |||||||    
T  38971333 tttttaaaagataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaatcactaccgtaaacacgaggaac 38971255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 23859049 - 23859002
Alignment:
Q  203 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  23859049 cccacctaacaccaaatgcaagaggacccaattctaataggcctaaaa 23859002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 250
Target Start/End: Complemental strand, 7398426 - 7398380
Alignment:
Q  204 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||| |||||||||||||||||| ||| |||||||||||||||||||    
T  7398426 ccacgtaacaccaaaagcaagaggacccaattctaataggcctaaaa 7398380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 10955671 - 10955605
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaa 84  Q
    |||||| |||| | |||||||||||||||||||| ||||||||| | ||| ||||||| ||||||||    
T  10955671 cagggctgtccatgagaattcggaggctcagctcggggaatgaatagaggtcagtgattaaatcaaa 10955605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 9014782 - 9014858
Alignment:
Q  114 tatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    |||||| ||||| ||||||||||||| || ||| |||||||||       |||||||||||||||| |||||||||||||||||    
T  9014782 tatttaaattttgtaaaagataaatacaatgtgtcgtatatat-------acccaaaggtgaaaatcactaccgtatacatgag 9014858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 17800268 - 17800320
Alignment:
Q  148 cgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaa 200  Q
    ||||||||||  ||||||||||| |||||||| |||||||||| |||||||||    
T  17800268 cgtatatatgttgtacacccaaaagtgaaaatcactaccgtatgcatgaggaa 17800320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 334 - 384
Target Start/End: Complemental strand, 28749647 - 28749597
Alignment:
Q  334 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    |||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  28749647 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 28749597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 26917810 - 26917855
Alignment:
Q  205 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||||||||  ||| |||||||||| ||||||||    
T  26917810 cacctaacaccaaaagcaagaagacccaattctaataagcctaaaa 26917855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 27237551 - 27237596
Alignment:
Q  205 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||| ||||||||  ||| |||||||||||||||||||    
T  27237551 cacctaacaccataagcaagatgacccaattctaataggcctaaaa 27237596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 18 - 400
Target Start/End: Original strand, 9172940 - 9173322
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||| | |||| |            ||| | ||||||||||||    
T  9172940 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaacaatgttctatt 9173039  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9173040 tatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 9173139  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtg 317  Q
    ||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||        |||||||||| |||||||||||    
T  9173140 aagtaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggctggggatattaaaaaaaattggagggcaataatactagtg 9173239  T
Q  318 ggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctga 400  Q
    ||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  9173240 ggtattaaaaa-aaaattgaggcccatgactgagggaggcccaactctgttgagctgtttgcaccccctcagggccgggcctga 9173322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 16 - 387
Target Start/End: Complemental strand, 19955914 - 19955544
Alignment:
Q  16 tacagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttcta 115  Q
    |||||||| |||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||          |||| ||||||| ||||    
T  19955914 tacagggctgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgaatttttttttaaaa-agcaatgatcta 19955816  T
Q  116 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacc 215  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  19955815 tttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacctaacacc 19955716  T
Q  216 aaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtat-tnnnnnnnnttggagggcagtaatacta 314  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||          ||||||||||| | |||||    
T  19955715 aaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtataattttttttttggagggcagcagtacta 19955616  T
Q  315 gtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctca 387  Q
    |||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19955615 gtgggtattaaaaa-aaaattgaggcccatgactgagggaggtccagctctgttgagctgtttgcacccctca 19955544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 18 - 384
Target Start/End: Original strand, 1366797 - 1367161
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||| | |||||            ||  |||||||||||||||    
T  1366797 cagggccgtctctacgaatttggaggctcagctctgggaatgaaaagaggccagtgataaattgaaaacatatttttttttaa--gagcaatgttctatt 1366894  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  1366895 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaacccccacctaacaccaa 1366994  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggcagtaatactagtg 317  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||    
T  1366995 aagcaagatgacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattaaaaaattttggagggcagtaatactagtg 1367094  T
Q  318 ggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1367095 ggtattaaaattttttttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 1367161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 18 - 399
Target Start/End: Complemental strand, 17169151 - 17168769
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||| ||| |||||||||||||||||||           |||| ||||||||||||||    
T  17169151 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaa-agcaatgttctatt 17169053  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||    
T  17169052 tatattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgaggaacccctacctaacaccaa 17168953  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt---nnnnnnnnttggagggcagtaatacta 314  Q
    ||||||||  ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||           ||||||||||||| |||||    
T  17168952 aagcaagaagacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaagaaaattggagggcagtagtacta 17168853  T
Q  315 gtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 399  Q
    |||||||||||||  ||| ||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||    
T  17168852 gtgggtattaaaa--aaaattgaggcccatgactgagggaggccaagctctattgagctgtttgcatcccctcagggtcgggcctg 17168769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 18 - 399
Target Start/End: Original strand, 40501707 - 40502090
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||| ||| |||||||||||||||||||           |||| || |||| ||||||    
T  40501707 cagggccgtccctaagaattcggaggctcgactctgagaatgaaaagaggtcagtgataaaatcaaaacgtattttttaaaaaaaaagtaatgatctatt 40501806  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||  ||||||||||||||    
T  40501807 tatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaagaacctccacctaacaccaa 40501906  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcagtaatactagt 316  Q
    ||||||||  | ||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||         || |||||||||| |||||||    
T  40501907 aagcaagatgatctaattctaatagacctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaatttagagggcagtagtactagt 40502006  T
Q  317 gggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 399  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  40502007 gggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggacgggcctg 40502090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 21 - 399
Target Start/End: Original strand, 13913401 - 13913782
Alignment:
Q  21 ggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttat 120  Q
    |||||||||||||||||||||||||  |||||| ||||||||| | ||||||||||||||||||| |           |||| ||||||| |||||||||    
T  13913401 ggccgtccctaagaattcggaggcttggctctgagaatgaaaagatgccagtgataaaatcaaaatgtattttttttaaaaa-agcaatgatctatttat 13913499  T
Q  121 attttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaa 218  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  13913500 attttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgagaaacccccacctaacaccaaa 13913599  T
Q  219 agcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt--nnnnnnnnttggagggcagtaatactagt 316  Q
    |||||||  ||||||||||||||||||||||||  |||||||| |||||||||||||| ||||||||||          ||| ||||||||| |||||||    
T  13913600 agcaagatgacctaattctaataggcctaaaaggctaaaacaatgggacagaaaatggttgggggtattaaaaaaaaaattgaagggcagtagtactagt 13913699  T
Q  317 gggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 399  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  13913700 gggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggacgggcctg 13913782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 99 - 384
Target Start/End: Complemental strand, 27559752 - 27559463
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27559752 aaaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 27559653  T
Q  199 aactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt---nnnnnnnn 295  Q
    ||| |||||||||||||| ||| ||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||               
T  27559652 aacccccacctaacaccataagtaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaaaa 27559553  T
Q  296 ttggagggcagtaatactagtgggtatt-aaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    || |||||||||| |||||||||||||| ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27559552 tttgagggcagtagtactagtgggtattaaaaaaaaaaattgaggcccatgactgagggaggtccagctctgttgagctgtttgcacccc 27559463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 18 - 402
Target Start/End: Original strand, 51607358 - 51607742
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    |||| |||||||||| ||||||||||||| |||||||||||||||| ||| |||||||||||||||||||           |||| |  |||||| ||||    
T  51607358 caggaccgtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaaa--aatgttttatt 51607455  T
Q  118 tatattttttaaaagataaatataaggtg-ccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||    
T  51607456 tatattttttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgaggaactcccatctaatacca 51607555  T
Q  217 aaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt-nnnnnnnnttggagggcagtaatactag 315  Q
    |||||||||| || |||||||||||||||||||||  ||||| ||||| ||||||||| ||||||||||||         ||| ||||||||| ||||||    
T  51607556 aaagcaagaggacataattctaataggcctaaaaggctaaaa-aagggaacagaaaat-gctgggggtattaaaaaaaaattgaagggcagtagtactag 51607653  T
Q  316 tgggtatt-aaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacc-cctcagggtcgggcctgatc 402  Q
    ||| |||| ||||| |||  |||||||||||| ||||| |||||||||||| |||||||||||||||| ||||| |  |||||||||||    
T  51607654 tggatattaaaaaaaaaaaatgaggcccatgattgaggaaggcccagctctattgagctgtttgcaccacctcatgaccgggcctgatc 51607742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 160; E-Value: 8e-85
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 23185622 - 23185366
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||| ||| ||||||||||||||| ||||  ||| |||||| |||||||||||||||||||||||           |||||||||||||||||||    
T  23185622 cagggccgttcctgagaattcggaggctcggctcgaggattgaaaagaggccagtgataaaatcaaaacg-tattttttttaaaagagcaatgttctatt 23185524  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  23185523 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 23185424  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    ||||||||| | ||||||||||||||||||||||  ||||||||| ||||||||||||    
T  23185423 aagcaagaggaactaattctaataggcctaaaaggctaaaacaagaggacagaaaatg 23185366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 106 - 400
Target Start/End: Complemental strand, 44895754 - 44895466
Alignment:
Q  106 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactccc 205  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||  |      ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  44895754 caatgatctatttatattttttaaaagataaatataaggtggcgggt------ggtacacccaaaggtgaaaatgattaccgtatacatgaggaaccccc 44895661  T
Q  206 acctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattnnnnnnnnttggagggca 305  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||| |||||||||||||||| ||||||||        ||||||| ||    
T  44895660 acctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaagggacagaaaatggct-ggggtattaaaaaaaattggaggaca 44895562  T
Q  306 gtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctga 400  Q
    ||| ||||||||| ||||||||| |||  || ||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||    
T  44895561 gtagtactagtggatattaaaaaaaaaaatgtggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggccgagcctga 44895466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 9180922 - 9181155
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||| | |||| |            ||| | ||||||||||||    
T  9180922 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaacaatgttctatt 9181021  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9181022 tatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 9181121  T
Q  218 aagcaagagaacctaattctaataggcctaaaag 251  Q
    ||||||||| ||||||||||||||||||||||||    
T  9181122 aagcaagaggacctaattctaataggcctaaaag 9181155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 18 - 275
Target Start/End: Original strand, 4971536 - 4971792
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    |||||| |||||| ||||||| ||||||| | || ||||||||||| || ||||||||||||||||||| |           ||||||||||||||||||    
T  4971536 cagggctgtccctgagaattctgaggctcggttcggggaatgaaaagagaccagtgataaaatcaaaac-atatttttttttaaagagcaatgttctatt 4971634  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||    
T  4971635 tatattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 4971734  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    ||||||||| | ||||||||||||||||||||||  ||||||||| ||||| ||||||    
T  4971735 aagcaagaggaactaattctaataggcctaaaaggctaaaacaagaggacaaaaaatg 4971792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 44655936 - 44655703
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||| || ||||||||||||||||||| |          |||||||||||||||||||    
T  44655936 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagagaccagtgataaaatcaaaac-ataatttttttaaaagagcaatgttctatt 44655838  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  44655837 tatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaa 44655738  T
Q  218 aagcaagagaacctaattctaataggcctaaaaga 252  Q
    || |||||| | ||||||||||||  |||||||||    
T  44655737 aatcaagaggaactaattctaataatcctaaaaga 44655703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 16 - 268
Target Start/End: Complemental strand, 5316877 - 5316626
Alignment:
Q  16 tacagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttcta 115  Q
    ||||||||||||||| |||||| ||||||||  |  | |||||||||| ||| |||||||||||||||||||           |||||||||||||||||    
T  5316877 tacagggccgtccctgagaatttggaggctcgaccttaggaatgaaaagaggtcagtgataaaatcaaaacg-tattttttttaaaagagcaatgttcta 5316779  T
Q  116 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacc 215  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  5316778 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 5316679  T
Q  216 aaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggaca 268  Q
    |||| |||||| | ||||||||||||  ||||||||  ||||||||| |||||    
T  5316678 aaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagaggaca 5316626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 17 - 235
Target Start/End: Complemental strand, 5027747 - 5027528
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg-annnnnnnnnnaaaagagcaatgttcta 115  Q
    |||||||||||||| |||||||||||||||  ||| ||||||||||| ||||||||||||||||||||||| |          |||||||||||||||||    
T  5027747 acagggccgtccctgagaattcggaggctcgactcggggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttcta 5027648  T
Q  116 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacc 215  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| |||||||||||||    
T  5027647 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgaggaacccccacctaacacc 5027548  T
Q  216 aaaagcaagagaacctaatt 235  Q
    ||||||||||| | ||||||    
T  5027547 aaaagcaagaggaactaatt 5027528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 14146495 - 14146295
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||           |||||||| ||||||||||    
T  14146495 cagggccgtccctgagaattcggaggctcggctcttggaatgaaaagaggccagtgataaaatcaaaacg-tattttttttaaaagagcgatgttctatt 14146397  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||    
T  14146396 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 14146297  T
Q  218 aa 219  Q
    ||    
T  14146296 aa 14146295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 50881621 - 50881369
Alignment:
Q  21 ggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttat 120  Q
    |||||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||||| ||||             ||||||||||||||||||||||    
T  50881621 ggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaattaaaat--ctatttttttaaaagagcaatgttctatttat 50881524  T
Q  121 attttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaag 220  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | | |||||||||||||||| |||||||||||||||  ||||||||||||||||     
T  50881523 attttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgaggaacctccacctaacaccaaaat 50881424  T
Q  221 caagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
     ||||| | ||||||||||||  ||||||||  ||||||||| ||||||||||||    
T  50881423 taagaggaactaattctaataatcctaaaaggctaaaacaagaggacagaaaatg 50881369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 6771989 - 6771786
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnna--aaagagcaatgttcta 115  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||              ||||||| ||||||||    
T  6771989 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtgttttttttttttaaagagcgatgttcta 6771890  T
Q  116 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacc 215  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||  ||||||||||||    
T  6771889 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacacgaggaacctccacctaacacc 6771790  T
Q  216 aaaa 219  Q
    ||||    
T  6771789 aaaa 6771786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 16 - 219
Target Start/End: Complemental strand, 3406616 - 3406413
Alignment:
Q  16 tacagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttcta 115  Q
    |||||||| |||||| |||||| ||||||||||||| ||||||||||| ||| |||||||||||| ||||||           |||||||| ||||||||    
T  3406616 tacagggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgtttttttttttaaaagagcgatgttcta 3406517  T
Q  116 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacc 215  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||| |  |||||||||||||||||||||||||||||||| |||||||||||||    
T  3406516 tttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 3406417  T
Q  216 aaaa 219  Q
    ||||    
T  3406416 aaaa 3406413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 16 - 219
Target Start/End: Original strand, 3440204 - 3440407
Alignment:
Q  16 tacagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttcta 115  Q
    |||||||| |||||| |||||| ||||||||||||| ||||||||||| ||| |||||||||||| ||||||           |||||||| ||||||||    
T  3440204 tacagggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgtttttttttttaaaagagcgatgttcta 3440303  T
Q  116 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacc 215  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||| |  |||||||||||||||||||||||||||||||| |||||||||||||    
T  3440304 tttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 3440403  T
Q  216 aaaa 219  Q
    ||||    
T  3440404 aaaa 3440407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 24 - 219
Target Start/End: Complemental strand, 16140244 - 16140050
Alignment:
Q  24 cgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttatatt 123  Q
    ||||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||           |||||||  ||||||||||||||||    
T  16140244 cgtccctgagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacg-tattttttttaaaagagtgatgttctatttatatt 16140146  T
Q  124 ttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaa 219  Q
    |||||||||||||||| ||||||  |||||||||||||||||| | |||||||||||||||||||||||||||||||  |||||||||||| ||||    
T  16140145 ttttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaatccccacctaacactaaaa 16140050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 27906646 - 27906868
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| ||||||  |||||||| ||||||||||||||||||||||            ||||||||||||||| |||    
T  27906646 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttccatt 27906745  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| |||||||||             |||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  27906746 tatattttttaaaagataaatacaaggtgccgc------------cacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 27906833  T
Q  218 aagcaagagaacctaattctaataggcctaaaaga 252  Q
    || |||||| | ||||||||||||  |||||||||    
T  27906834 aatcaagaggaactaattctaataatcctaaaaga 27906868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 35 - 219
Target Start/End: Original strand, 41697072 - 41697255
Alignment:
Q  35 attcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatttatattttttaaaagat 134  Q
    ||||||| |||| |||||||||||||||| ||| |||||||||||||||||||           |||||||| |||||||||||||||||||||||||||    
T  41697072 attcggaagctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg-tattttttttaaaagagcgatgttctatttatattttttaaaagat 41697170  T
Q  135 aaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaa 219  Q
    ||||| || ||  ||||||||||| ||||| ||| | |||||||||||||||||||||||||||||| |||||||||||||||||    
T  41697171 aaatacaaagtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 41697255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 17 - 193
Target Start/End: Original strand, 21740851 - 21741029
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnn--aaaagagcaatgttct 114  Q
    |||||||||||| | ||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| |             ||||||||||||||||    
T  21740851 acagggccgtccttgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaatgtatttttttttttaaaagagcaatgttct 21740950  T
Q  115 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtataca 193  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||    
T  21740951 atttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 22865378 - 22865538
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||| | |||||||||||||||| ||| || ||||||||||||||||           |||||||||||||||||||    
T  22865378 cagggccgtccctgagaattcggaggcacggctctgggaatgaaaagaggtcaatgataaaatcaaaacgtattttttttcaaaagagcaatgttctatt 22865477  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaat 179  Q
    |||||||||||||||||||||| ||| |||  ||||||| ||||||||||||||||||||||    
T  22865478 tatattttttaaaagataaatacaagatgctctatatat-cggtacacccaaaggtgaaaat 22865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 6889805 - 6889634
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||| | | ||||||||||||| | |||| ||||||||| ||| |||||||||||||||||||           |||||||||||||||||||    
T  6889805 cagggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacg--tatttttttaaaagagcaatgttctatt 6889708  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtata 191  Q
    |||||||||||||||||||||| || ||  ||||||||||||||||| ||| |||||||||||| | |||||||    
T  6889707 tatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtata 6889634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 6891651 - 6891480
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||| | | ||||||||||||| | |||| ||||||||| ||| |||||||||||||||||||           |||||||||||||||||||    
T  6891651 cagggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacg--tatttttttaaaagagcaatgttctatt 6891554  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtata 191  Q
    |||||||||||||||||||||| || ||  ||||||||||||||||| ||| |||||||||||| | |||||||    
T  6891553 tatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtata 6891480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 38547035 - 38547136
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 199  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| | ||||||||||||    
T  38547035 aaagatcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgagga 38547134  T
Q  200 ac 201  Q
    ||    
T  38547135 ac 38547136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 39134720 - 39134823
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaa-gataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    |||||| |||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||  ||||||||||||||| ||| ||||| |||||||||||    
T  39134720 aaaagaacaatgttctatttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgag 39134819  T
Q  198 gaac 201  Q
    ||||    
T  39134820 gaac 39134823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 45758609 - 45758507
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| ||||||||||||||||||  ||||||  |||||||||   |||| |||||||||||||| ||||||||||||||||||    
T  45758609 aaaagaacaatgttctatttaaattttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgagg 45758510  T
Q  199 aac 201  Q
    |||    
T  45758509 aac 45758507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 5533428 - 5533326
Alignment:
Q  99 aaaagagcaatgttctatttatatttttt-aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    |||||| |||| ||||||||| ||||||| |||||||||| | |||||||||||||||||  |||||  ||||||||||||| |||||||||||||||||    
T  5533428 aaaagaacaatattctatttaaatttttttaaaagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgag 5533329  T
Q  198 gaa 200  Q
    |||    
T  5533328 gaa 5533326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 99 - 197
Target Start/End: Complemental strand, 38853637 - 38853539
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    |||||| || ||||||||||| |||||||||| |||||||| |||||| ||||||||||  ||| | |||||||||||||| |||||||||||||||||    
T  38853637 aaaagaacagtgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatgag 38853539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 43235774 - 43235870
Alignment:
Q  107 aatgttctatttatatttttta--aaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    ||||||||||||| |||||||   ||||||||||| ||| || ||||||||||  |||||||||||||||||||| |||| ||||||||||||||||    
T  43235774 aatgttctatttaaatttttttttaaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaac 43235870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 26804059 - 26803965
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    ||||| ||||| | |||||| ||||||||||||||||||| ||| || |||||||||||| |||||   ||||||||||| |||||||||||||||||    
T  26804059 aaagaacaatgctatatttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgag 26803965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 106 - 197
Target Start/End: Complemental strand, 33170867 - 33170776
Alignment:
Q  106 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    ||||||| |||||| |||||||||||  |||||| || |||  |||||||||||||||||| || ||||||||| |||||||||||||||||    
T  33170867 caatgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgag 33170776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 107 - 189
Target Start/End: Complemental strand, 35392376 - 35392295
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgta 189  Q
    |||||| |||||| |||||||||  |||||||| |||||||||||||||||||||| | |||||||||||||| |||||||||    
T  35392376 aatgttttatttaaattttttaag-gataaatacaaggtgccgtatatatgcggtatatccaaaggtgaaaatcactaccgta 35392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 50146411 - 50146309
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| | ||||| ||||||||||  |||||||||| |||||| | || |||||||||| ||||| | |||| |||||||||||    
T  50146411 aaaagaacaatgttctatttaaactttttgaaagataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgagg 50146312  T
Q  199 aac 201  Q
    |||    
T  50146311 aac 50146309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 6221791 - 6221691
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 199  Q
    ||||| |||||||||||||| |||||| |||||||||||| || |||||||||||| |||||||| | ||| |||||||| | || |||||| |||||||    
T  6221791 aaagaacaatgttctatttaaattttt-aaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgagga 6221693  T
Q  200 ac 201  Q
    ||    
T  6221692 ac 6221691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 10925951 - 10926052
Alignment:
Q  99 aaaagagcaatgttctatttatat-tttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    |||||| |||| |||||||||  | ||||||||| ||||||| || |||||||||||||| | | || |||||| ||||||| |||||||||||||||||    
T  10925951 aaaagaacaatattctatttaagtatttttaaaaaataaatacaatgtgccgtatatatgagatgcatccaaagatgaaaatcactaccgtatacatgag 10926050  T
Q  198 ga 199  Q
    ||    
T  10926051 ga 10926052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 17322621 - 17322684
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggta 162  Q
    |||||| |||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  17322621 aaaagaacaatgttctatttatatttttttaaagataaatacaatgtagcgtatatatgcggta 17322684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 34247208 - 34247153
Alignment:
Q  32 agaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacg 87  Q
    ||||||||||||||| ||||||| |||||||| ||| |||||||||||||||||||    
T  34247208 agaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaacg 34247153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 309 - 384
Target Start/End: Complemental strand, 23181801 - 23181727
Alignment:
Q  309 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    |||||| ||||||| ||||| ||| ||||||||||| | || ||| |||||||||| |||||||||||||||||||    
T  23181801 atactaatgggtataaaaaa-aaatttgaggcccatcattgggggtggcccagctcggttgagctgtttgcacccc 23181727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 39134849 - 39134896
Alignment:
Q  203 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  39134849 cccacctaacaccaaaagcaagaggacccaattctaataggcttaaaa 39134896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 5533302 - 5533251
Alignment:
Q  199 aactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    ||||||||||||||| |||||||||||| | | ||||||||||||| |||||    
T  5533302 aactcccacctaacatcaaaagcaagaggatccaattctaataggcgtaaaa 5533251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 384
Target Start/End: Complemental strand, 14146272 - 14146221
Alignment:
Q  333 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  14146272 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 14146221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 351 - 384
Target Start/End: Original strand, 5027991 - 5028024
Alignment:
Q  351 gggaggcccagctctgttgagctgtttgcacccc 384  Q
    |||||||||||||| |||||||||||||||||||    
T  5027991 gggaggcccagctcggttgagctgtttgcacccc 5028024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 26803934 - 26803889
Alignment:
Q  205 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    ||||||||||||||||||||| |||  |||||||||||| ||||||    
T  26803934 cacctaacaccaaaagcaagataactcaattctaataggactaaaa 26803889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 27906949 - 27906998
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  27906949 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 27906998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 38547162 - 38547207
Alignment:
Q  203 cccacctaacaccaaaagcaagagaacctaattctaataggcctaa 248  Q
    |||||||||||| ||||| ||||| ||| |||||||||||||||||    
T  38547162 cccacctaacactaaaagtaagaggaccaaattctaataggcctaa 38547207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Complemental strand, 44655604 - 44655555
Alignment:
Q  335 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 384  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  44655604 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 44655555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 52127521 - 52127550
Alignment:
Q  164 acccaaaggtgaaaatgactaccgtataca 193  Q
    ||||||||||||||||||||||||||||||    
T  52127521 acccaaaggtgaaaatgactaccgtataca 52127550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 17 - 282
Target Start/End: Complemental strand, 106724 - 106459
Alignment:
Q  17 acagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctat 116  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||           |||||| |||||||||||    
T  106724 acagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaagaacaatgttctat 106625  T
Q  117 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacacca 216  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  106624 ttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 106525  T
Q  217 aaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggg 282  Q
    |||||||||| |||||| |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  106524 aaagcaagaggacctaaatctaataggcctaaaagactaaaacaaggggacataaaatggctgggg 106459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 106454 - 106379
Alignment:
Q  325 aaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccc-ctcagggtcgggcctg 399  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  106454 aaaaaaaatttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccctctcagggccgggcctg 106379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 144; Significance: 3e-75; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 1527 - 1271
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||           ||||||||| |||||||||    
T  1527 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg-tattttttttaaaagagcactgttctatt 1429  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaa 217  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||    
T  1428 tatattttttaaaagataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 1329  T
Q  218 aagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 275  Q
    || |||||| | |||||| |||||  |||||||| |||||||||| ||||| ||||||    
T  1328 aatcaagaggaactaattttaataatcctaaaaggttaaaacaagaggacaaaaaatg 1271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 257 - 359
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |    
T  257 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatg 356  T
Q  199 aac 201  Q
    |||    
T  357 aac 359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 206496 - 206590
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    ||||||||||||| ||||| ||||||||||||| |||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  206496 aatgttctatttaaattttgtaaaagataaatacaaggtgtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaac 206590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 68; Significance: 6e-30; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 106 - 201
Target Start/End: Original strand, 173516 - 173611
Alignment:
Q  106 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||| ||||| |||||||||||| ||||||||    
T  173516 caatgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaac 173611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 296 - 401
Target Start/End: Complemental strand, 4252 - 4147
Alignment:
Q  296 ttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccc-ctcagggtcgg 394  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| |||    
T  4252 ttggagggcagtagtactagtgggtattaaaaaaaaa-ttgaggcccatgactggaggaggcccagctctgttgagctgtttgcaccctctcagggccgg 4154  T
Q  395 gcctgat 401  Q
     ||||||    
T  4153 ccctgat 4147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 106 - 201
Target Start/End: Complemental strand, 39022 - 38927
Alignment:
Q  106 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    |||||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||||| |||| |||||||| ||||||||||| |||||||||    
T  39022 caatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaac 38927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 230858 - 230961
Alignment:
Q  99 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 198  Q
    |||||| |||||||||||||| |||| ||||||||||||| |||||||  ||||||||||| || |||||||||||||||| |||||| |||||||||||    
T  230858 aaaagaacaatgttctatttaaatttgttaaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgagg 230957  T
Q  199 aact 202  Q
    ||||    
T  230958 aact 230961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 230986 - 231033
Alignment:
Q  203 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||||    
T  230986 cccacctaacaccaaaagcaagaggacccgattctaataggcctaaaa 231033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 63; Significance: 6e-27; HSPs: 2)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 1450 - 1356
Alignment:
Q  107 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 201  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||| |||| ||||||||||||||||    
T  1450 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaac 1356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 1330 - 1285
Alignment:
Q  205 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    |||||||||||||||| ||||| ||| |||||||| ||||||||||    
T  1330 cacctaacaccaaaagtaagaggacccaattctaacaggcctaaaa 1285  T

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Target: scaffold0182 (Bit Score: 61; Significance: 9e-26; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 23993 - 24093
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 199  Q
    ||||| |||| ||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| | |||||||| ||| ||||    
T  23993 aaagaacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtatgcataagga 24092  T
Q  200 a 200  Q
    |    
T  24093 a 24093  T

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Target: scaffold0229 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 110 - 284
Target Start/End: Complemental strand, 23976 - 23803
Alignment:
Q  110 gttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacct 209  Q
    ||||||||||| |||||||||| |||||||| ||||||||||| | || || || ||||||  | |||||||||||||||||||  || ||| ||||| |    
T  23976 gttctatttattttttttaaaaaataaatatgaggtgccgtatttttggggaacccccaaaaataaaaatgactaccgtatacacaagaaacccccactt 23877  T
Q  210 aacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggt 284  Q
     |||| ||| |||| | |||||| ||||| ||||||||||| |   ||||| ||||||| |||||||||||||||    
T  23876 tacacaaaaggcaa-ataacctatttctattaggcctaaaaaacataaacagggggacaaaaaatggctgggggt 23803  T

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Target: scaffold0001 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 183244 - 183106
Alignment:
Q  18 cagggccgtccctaagaattcggaggctcagctctgggaatgaaaataggccagtgataaaatcaaaacgannnnnnnnnnaaaagagcaatgttctatt 117  Q
    ||||||||||||| | ||||| ||||||| |||||||||||||||| |||||||||||||||| ||||||           |||||||  ||||||||||    
T  183244 cagggccgtccctgaaaattcagaggctcggctctgggaatgaaaagaggccagtgataaaattaaaacg-tattttttttaaaagagagatgttctatt 183146  T
Q  118 tatattttttaaaagataaatataaggtgccgtatatatg 157  Q
    |||||||||||||||||||||| || ||  ||||||||||    
T  183145 tatattttttaaaagataaatacaaagtatcgtatatatg 183106  T

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Target: scaffold0001; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 181969 - 181903
Alignment:
Q  153 atatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacaccaaaa 219  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  181969 atatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaacccccatctaacaccaaaa 181903  T

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Target: scaffold0022 (Bit Score: 50; Significance: 3e-19; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 99 - 197
Target Start/End: Complemental strand, 40191 - 40091
Alignment:
Q  99 aaaagagcaatgttctattta--tattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatga 196  Q
    |||||| ||||||||||||||  | |||||||||||||||||| |||||||||||| ||||  |||||||| ||||||||||| || | |||||||||||    
T  40191 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatga 40092  T
Q  197 g 197  Q
    |    
T  40091 g 40091  T

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Target: scaffold0022; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 99 - 197
Target Start/End: Complemental strand, 138251 - 138151
Alignment:
Q  99 aaaagagcaatgttctattta--tattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatga 196  Q
    |||||| ||||||||||||||  | |||||||||||||||||| |||||||||||| ||||  |||||||| ||||||||||| || | |||||||||||    
T  138251 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatga 138152  T
Q  197 g 197  Q
    |    
T  138151 g 138151  T

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Target: scaffold0022; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 250
Target Start/End: Complemental strand, 40058 - 40012
Alignment:
Q  204 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  40058 ccacctaacacaaaaagcaagaggacccaattctaataggcctaaaa 40012  T

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Target: scaffold0022; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 250
Target Start/End: Complemental strand, 138118 - 138072
Alignment:
Q  204 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 250  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  138118 ccacctaacacaaaaagcaagaggacccaattctaataggcctaaaa 138072  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 351360 - 351413
Alignment:
Q  126 ttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaat 179  Q
    |||||||||||||| |||||| ||||||||||  ||||||||||||||||||||    
T  351360 ttaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaat 351413  T

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Target: scaffold0227 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 16095 - 16033
Alignment:
Q  135 aaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 197  Q
    ||||| ||| || ||||| ||||||||||| |||||| ||||||| |||||||||||||||||    
T  16095 aaatacaagatgtcgtatgtatgcggtacatccaaagatgaaaatcactaccgtatacatgag 16033  T

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Target: scaffold0227; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 16168 - 16123
Alignment:
Q  100 aaagagcaatgttctatttatattttttaaaagataaatataaggt 145  Q
    |||||| ||||||||||||| ||||||||||||||||||| |||||    
T  16168 aaagagaaatgttctatttaaattttttaaaagataaatacaaggt 16123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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