View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14393_high_18 (Length: 322)

Name: NF14393_high_18
Description: NF14393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14393_high_18
NF14393_high_18
[»] chr6 (61 HSPs)
chr6 (1-322)||(22010204-22010543)
chr6 (1-322)||(14741941-14742283)
chr6 (95-322)||(14737195-14737423)
chr6 (1-322)||(11857213-11857552)
chr6 (95-253)||(28155200-28155356)
chr6 (95-254)||(6438797-6438954)
chr6 (95-251)||(16839047-16839201)
chr6 (95-254)||(33330062-33330219)
chr6 (95-250)||(6005724-6005877)
chr6 (95-254)||(33335559-33335716)
chr6 (95-255)||(5343777-5343935)
chr6 (1-110)||(30125033-30125141)
chr6 (1-63)||(16579024-16579086)
chr6 (1-63)||(16616294-16616356)
chr6 (1-63)||(27647483-27647545)
chr6 (1-150)||(6097822-6097970)
chr6 (1-109)||(2171981-2172088)
chr6 (1-63)||(3073265-3073327)
chr6 (1-63)||(16554469-16554531)
chr6 (1-63)||(16631025-16631087)
chr6 (1-62)||(5674245-5674306)
chr6 (1-62)||(22709568-22709629)
chr6 (1-62)||(23896880-23896941)
chr6 (1-62)||(26253605-26253666)
chr6 (1-61)||(6439008-6439068)
chr6 (1-43)||(5266596-5266638)
chr6 (1-63)||(6136470-6136532)
chr6 (1-43)||(14737100-14737142)
chr6 (1-63)||(25420812-25420874)
chr6 (1-63)||(34166681-34166743)
chr6 (1-110)||(411701-411809)
chr6 (95-225)||(5674359-5674488)
chr6 (1-60)||(5343990-5344049)
chr6 (1-63)||(13150864-13150926)
chr6 (48-98)||(14737128-14737177)
chr6 (1-41)||(28155105-28155145)
chr6 (1-43)||(5016984-5017026)
chr6 (1-63)||(6026849-6026911)
chr6 (1-43)||(16652731-16652773)
chr6 (1-43)||(31085961-31086003)
chr6 (1-63)||(33342611-33342673)
chr6 (1-63)||(34151843-34151905)
chr6 (1-63)||(34164459-34164521)
chr6 (95-151)||(5266487-5266543)
chr6 (166-226)||(16554655-16554714)
chr6 (166-226)||(16631211-16631270)
chr6 (166-226)||(16652898-16652957)
chr6 (95-150)||(6136363-6136418)
chr6 (1-60)||(16839256-16839315)
chr6 (170-205)||(22709499-22709534)
chr6 (1-60)||(33329948-33330007)
chr6 (170-204)||(2171959-2171993)
chr6 (189-227)||(5266431-5266469)
chr6 (170-204)||(5343920-5343954)
chr6 (5-43)||(24714938-24714976)
chr6 (14-43)||(603772-603801)
chr6 (48-109)||(5266550-5266610)
chr6 (2-43)||(18234650-18234691)
chr6 (22-62)||(5413942-5413982)
chr6 (166-206)||(16578861-16578900)
chr6 (166-206)||(16616480-16616519)
[»] chr7 (50 HSPs)
chr7 (1-322)||(24023834-24024173)
chr7 (1-322)||(12397150-12397477)
chr7 (1-322)||(4873367-4873706)
chr7 (1-316)||(31109085-31109423)
chr7 (1-229)||(12406594-12406842)
chr7 (95-255)||(16880373-16880531)
chr7 (95-255)||(16885228-16885386)
chr7 (95-255)||(24265806-24265964)
chr7 (95-254)||(21811868-21812025)
chr7 (95-255)||(24260950-24261108)
chr7 (1-322)||(2058261-2058589)
chr7 (1-109)||(20357043-20357150)
chr7 (1-109)||(21640301-21640408)
chr7 (1-62)||(39730949-39731010)
chr7 (1-109)||(24789442-24789549)
chr7 (1-109)||(43504598-43504705)
chr7 (1-59)||(1532900-1532958)
chr7 (1-63)||(1562510-1562572)
chr7 (1-63)||(6592844-6592906)
chr7 (1-63)||(32060811-32060873)
chr7 (1-62)||(47264190-47264251)
chr7 (1-62)||(48408414-48408475)
chr7 (1-109)||(18414152-18414259)
chr7 (1-109)||(21646520-21646627)
chr7 (1-60)||(21811754-21811813)
chr7 (1-63)||(6595060-6595122)
chr7 (1-63)||(20343515-20343577)
chr7 (1-62)||(2479883-2479944)
chr7 (1-62)||(18409322-18409383)
chr7 (1-62)||(21983790-21983851)
chr7 (1-62)||(44847635-44847696)
chr7 (1-62)||(21989454-21989515)
chr7 (95-257)||(24789556-24789715)
chr7 (1-61)||(18392705-18392765)
chr7 (189-322)||(20357231-20357351)
chr7 (100-151)||(21640238-21640289)
chr7 (95-242)||(1533033-1533177)
chr7 (189-262)||(21640149-21640220)
chr7 (1-60)||(16880586-16880645)
chr7 (1-60)||(16885441-16885500)
chr7 (1-60)||(24260836-24260895)
chr7 (1-43)||(79955-79997)
chr7 (95-204)||(6592683-6592792)
chr7 (95-204)||(6594899-6595008)
chr7 (1-44)||(49092237-49092280)
chr7 (170-204)||(1533014-1533048)
chr7 (170-204)||(21640279-21640313)
chr7 (170-204)||(24260931-24260965)
chr7 (1-110)||(25767422-25767524)
chr7 (14-43)||(46515831-46515860)
[»] chr4 (47 HSPs)
chr4 (1-322)||(9228701-9229040)
chr4 (1-322)||(9223914-9224253)
chr4 (1-254)||(3814320-3814590)
chr4 (25-322)||(18712294-18712612)
chr4 (1-322)||(51520696-51521035)
chr4 (1-254)||(5732961-5733232)
chr4 (95-254)||(18856023-18856180)
chr4 (95-254)||(45347446-45347603)
chr4 (95-254)||(45356927-45357084)
chr4 (1-253)||(56141526-56141797)
chr4 (1-244)||(24742302-24742562)
chr4 (1-63)||(13992801-13992863)
chr4 (1-110)||(31495778-31495886)
chr4 (1-61)||(18856234-18856294)
chr4 (1-61)||(18860446-18860506)
chr4 (1-63)||(8392997-8393059)
chr4 (1-63)||(8395206-8395268)
chr4 (1-61)||(45347332-45347392)
chr4 (1-63)||(7122282-7122344)
chr4 (1-63)||(7124504-7124566)
chr4 (1-62)||(28467993-28468054)
chr4 (1-62)||(31985143-31985204)
chr4 (1-43)||(29761182-29761224)
chr4 (1-62)||(5148225-5148286)
chr4 (1-45)||(5143807-5143851)
chr4 (1-45)||(8689052-8689096)
chr4 (1-63)||(5135664-5135726)
chr4 (1-63)||(5137890-5137952)
chr4 (1-43)||(16628361-16628403)
chr4 (1-43)||(38151926-38151968)
chr4 (1-42)||(3778116-3778157)
chr4 (2-43)||(16622783-16622824)
chr4 (189-244)||(29761002-29761055)
chr4 (95-151)||(29761073-29761129)
chr4 (1-44)||(5268707-5268750)
chr4 (1-43)||(6742904-6742946)
chr4 (95-204)||(7122396-7122505)
chr4 (1-43)||(10047932-10047974)
chr4 (166-226)||(8393183-8393242)
chr4 (166-226)||(8395392-8395451)
chr4 (170-225)||(13992618-13992671)
chr4 (95-150)||(7124618-7124673)
chr4 (95-150)||(8393111-8393166)
chr4 (1-43)||(36314719-36314761)
chr4 (1-43)||(36328928-36328970)
chr4 (1-43)||(54867745-54867787)
chr4 (48-109)||(29761136-29761196)
[»] chr2 (30 HSPs)
chr2 (1-317)||(39811492-39811829)
chr2 (1-250)||(32247091-32247337)
chr2 (95-251)||(19349584-19349738)
chr2 (95-251)||(19344726-19344880)
chr2 (1-262)||(9295877-9296155)
chr2 (1-244)||(11098402-11098662)
chr2 (1-244)||(14291850-14292110)
chr2 (1-73)||(44310486-44310558)
chr2 (1-109)||(4484800-4484907)
chr2 (1-109)||(30832937-30833044)
chr2 (1-62)||(25410189-25410250)
chr2 (1-62)||(32289164-32289225)
chr2 (1-63)||(12647890-12647952)
chr2 (1-110)||(6266290-6266398)
chr2 (1-62)||(40739380-40739441)
chr2 (1-62)||(3492300-3492361)
chr2 (1-48)||(36757433-36757480)
chr2 (1-43)||(8389639-8389681)
chr2 (1-45)||(28258685-28258729)
chr2 (1-43)||(10706741-10706783)
chr2 (1-43)||(21630511-21630553)
chr2 (1-43)||(33528113-33528155)
chr2 (1-43)||(39483443-39483485)
chr2 (1-37)||(20522794-20522830)
chr2 (170-205)||(25410120-25410155)
chr2 (170-205)||(30833032-30833067)
chr2 (170-204)||(3492232-3492266)
chr2 (9-43)||(23077968-23078002)
chr2 (29-62)||(35522138-35522171)
chr2 (170-225)||(4484662-4484715)
[»] scaffold0355 (1 HSPs)
scaffold0355 (1-317)||(3352-3689)
[»] chr5 (66 HSPs)
chr5 (95-322)||(15044925-15045151)
chr5 (1-322)||(27450053-27450394)
chr5 (1-322)||(43598963-43599303)
chr5 (1-322)||(43604455-43604795)
chr5 (1-322)||(43609947-43610287)
chr5 (1-322)||(27445209-27445551)
chr5 (95-254)||(28807205-28807362)
chr5 (95-251)||(33768488-33768642)
chr5 (95-251)||(33791620-33791774)
chr5 (95-254)||(37561076-37561233)
chr5 (1-322)||(1456653-1457008)
chr5 (95-251)||(2785679-2785833)
chr5 (95-322)||(43592518-43592743)
chr5 (95-254)||(31396619-31396776)
chr5 (95-254)||(37556254-37556411)
chr5 (95-254)||(31401476-31401633)
chr5 (95-322)||(31180506-31180720)
chr5 (1-109)||(29402565-29402672)
chr5 (1-110)||(30631825-30631933)
chr5 (1-257)||(29751455-29751708)
chr5 (1-62)||(16407657-16407718)
chr5 (1-110)||(18442109-18442217)
chr5 (1-110)||(9789685-9789793)
chr5 (1-110)||(29719981-29720089)
chr5 (1-109)||(24136361-24136468)
chr5 (1-109)||(26177482-26177589)
chr5 (1-63)||(22536775-22536837)
chr5 (1-63)||(29722168-29722230)
chr5 (1-63)||(29752312-29752374)
chr5 (1-130)||(15464981-15465109)
chr5 (1-62)||(16409093-16409154)
chr5 (1-61)||(10592859-10592919)
chr5 (81-225)||(35388038-35388183)
chr5 (1-62)||(15045203-15045264)
chr5 (1-62)||(36931859-36931920)
chr5 (1-61)||(25077721-25077781)
chr5 (1-61)||(25135690-25135750)
chr5 (1-61)||(40379693-40379753)
chr5 (1-60)||(37556140-37556199)
chr5 (1-43)||(31180773-31180815)
chr5 (1-43)||(43592797-43592839)
chr5 (1-62)||(9352823-9352884)
chr5 (1-61)||(16544009-16544069)
chr5 (1-61)||(16546231-16546291)
chr5 (100-152)||(30631762-30631814)
chr5 (1-61)||(40381904-40381964)
chr5 (1-60)||(28807091-28807150)
chr5 (1-60)||(37560962-37561021)
chr5 (1-43)||(14520796-14520838)
chr5 (1-62)||(26170373-26170434)
chr5 (100-144)||(29402684-29402728)
chr5 (166-225)||(10593044-10593102)
chr5 (95-251)||(24136201-24136354)
chr5 (95-204)||(25077835-25077944)
chr5 (95-204)||(25135804-25135913)
chr5 (1-35)||(35388196-35388230)
chr5 (2-43)||(12083667-12083708)
chr5 (1-60)||(2785888-2785947)
chr5 (170-205)||(24136338-24136373)
chr5 (287-322)||(30631699-30631734)
chr5 (1-60)||(31396505-31396564)
chr5 (1-60)||(33768697-33768756)
chr5 (1-60)||(33791829-33791888)
chr5 (1-43)||(11916460-11916502)
chr5 (22-62)||(25412396-25412436)
chr5 (1-29)||(43625605-43625633)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-322)||(34569-34908)
[»] chr8 (37 HSPs)
chr8 (95-254)||(39784454-39784611)
chr8 (1-269)||(25327679-25327965)
chr8 (1-322)||(7289442-7289772)
chr8 (1-255)||(10683754-10684026)
chr8 (1-322)||(6311591-6311920)
chr8 (95-251)||(35745695-35745849)
chr8 (1-322)||(18852642-18852971)
chr8 (1-322)||(30655939-30656267)
chr8 (1-262)||(4759549-4759827)
chr8 (1-262)||(18870036-18870314)
chr8 (95-262)||(10688728-10688893)
chr8 (1-109)||(33037302-33037409)
chr8 (1-109)||(36979892-36979999)
chr8 (1-130)||(31042924-31043052)
chr8 (1-61)||(7412876-7412936)
chr8 (1-61)||(39784340-39784400)
chr8 (95-262)||(1261544-1261710)
chr8 (1-63)||(2627334-2627396)
chr8 (1-63)||(3439103-3439165)
chr8 (1-62)||(26288440-26288501)
chr8 (1-62)||(26301697-26301758)
chr8 (1-62)||(26313691-26313752)
chr8 (1-109)||(1261430-1261537)
chr8 (100-225)||(36979756-36979880)
chr8 (1-43)||(10688633-10688675)
chr8 (1-43)||(25689576-25689618)
chr8 (189-262)||(33037490-33037561)
chr8 (1-63)||(42575832-42575894)
chr8 (100-151)||(33037421-33037472)
chr8 (1-43)||(5701967-5702009)
chr8 (1-63)||(15290158-15290220)
chr8 (1-63)||(15470527-15470589)
chr8 (1-43)||(4456575-4456617)
chr8 (170-205)||(1261525-1261560)
chr8 (1-60)||(35745904-35745963)
chr8 (1-43)||(23799107-23799149)
chr8 (170-204)||(33037397-33037431)
[»] chr1 (38 HSPs)
chr1 (1-317)||(41390825-41391170)
chr1 (95-317)||(41398480-41398712)
chr1 (1-254)||(1054529-1054800)
chr1 (1-254)||(39445796-39446067)
chr1 (95-249)||(44023506-44023658)
chr1 (95-249)||(25444721-25444873)
chr1 (95-249)||(25439528-25439680)
chr1 (95-225)||(43988078-43988208)
chr1 (95-322)||(24786954-24787168)
chr1 (1-225)||(24202267-24202491)
chr1 (95-243)||(24793776-24793921)
chr1 (2-109)||(51765007-51765113)
chr1 (1-110)||(20622697-20622805)
chr1 (1-61)||(44023392-44023452)
chr1 (1-63)||(9036018-9036080)
chr1 (1-63)||(9986801-9986863)
chr1 (1-63)||(21053555-21053617)
chr1 (1-62)||(19365784-19365845)
chr1 (1-61)||(44203233-44203293)
chr1 (1-62)||(19360928-19360989)
chr1 (1-62)||(25439414-25439475)
chr1 (1-62)||(25444607-25444668)
chr1 (1-62)||(40281974-40282035)
chr1 (1-43)||(24793681-24793723)
chr1 (1-62)||(13604111-13604172)
chr1 (1-62)||(21536128-21536189)
chr1 (2-62)||(26644390-26644450)
chr1 (1-43)||(13598967-13599009)
chr1 (1-43)||(37070334-37070376)
chr1 (1-43)||(41398764-41398806)
chr1 (95-204)||(44203347-44203456)
chr1 (2-43)||(16124197-16124238)
chr1 (166-226)||(9036204-9036263)
chr1 (170-205)||(19361023-19361058)
chr1 (170-205)||(19365879-19365914)
chr1 (1-43)||(3282273-3282315)
chr1 (95-255)||(20622533-20622691)
chr1 (6-43)||(29652381-29652418)
[»] chr3 (78 HSPs)
chr3 (1-254)||(18656742-18657014)
chr3 (95-254)||(2672548-2672705)
chr3 (95-254)||(2676704-2676861)
chr3 (1-317)||(28503334-28503662)
chr3 (95-266)||(24968406-24968575)
chr3 (1-317)||(28501167-28501495)
chr3 (95-255)||(8512540-8512698)
chr3 (95-255)||(8517420-8517578)
chr3 (95-255)||(32475784-32475942)
chr3 (1-322)||(40372271-40372600)
chr3 (95-255)||(32480642-32480800)
chr3 (1-322)||(22172677-22173041)
chr3 (1-244)||(7167607-7167867)
chr3 (95-322)||(8738652-8738867)
chr3 (95-262)||(9090890-9091054)
chr3 (2-244)||(27352097-27352356)
chr3 (1-109)||(8477880-8477987)
chr3 (1-62)||(23198453-23198514)
chr3 (1-150)||(7782548-7782696)
chr3 (1-62)||(23200652-23200713)
chr3 (1-62)||(26928096-26928157)
chr3 (1-63)||(3617049-3617111)
chr3 (1-63)||(54634725-54634787)
chr3 (2-63)||(6716101-6716162)
chr3 (2-63)||(25637029-25637090)
chr3 (1-62)||(37726222-37726283)
chr3 (3-63)||(800703-800763)
chr3 (1-63)||(1306526-1306588)
chr3 (1-62)||(33386153-33386214)
chr3 (1-62)||(37408052-37408113)
chr3 (1-60)||(2672434-2672493)
chr3 (1-60)||(2676590-2676649)
chr3 (100-225)||(8477744-8477868)
chr3 (1-63)||(4599030-4599092)
chr3 (1-63)||(4601251-4601313)
chr3 (1-63)||(10055820-10055882)
chr3 (1-63)||(10058042-10058104)
chr3 (1-63)||(10060264-10060326)
chr3 (1-63)||(10062486-10062548)
chr3 (1-63)||(10064708-10064770)
chr3 (1-63)||(10066930-10066992)
chr3 (1-62)||(27453504-27453565)
chr3 (1-62)||(36029640-36029701)
chr3 (189-244)||(2671268-2671321)
chr3 (2-62)||(10210994-10211054)
chr3 (1-45)||(27974449-27974493)
chr3 (1-45)||(32143868-32143912)
chr3 (1-43)||(6718303-6718345)
chr3 (1-43)||(8738557-8738599)
chr3 (1-43)||(9090795-9090837)
chr3 (1-63)||(10208793-10208855)
chr3 (1-43)||(21711768-21711810)
chr3 (1-43)||(27027273-27027315)
chr3 (1-43)||(30709274-30709316)
chr3 (1-43)||(40734090-40734132)
chr3 (1-43)||(45282600-45282642)
chr3 (32-109)||(2671111-2671187)
chr3 (1-45)||(27985973-27986017)
chr3 (1-60)||(32475997-32476056)
chr3 (1-60)||(32480855-32480914)
chr3 (1-43)||(16264896-16264938)
chr3 (5-63)||(27038588-27038646)
chr3 (1-43)||(39032033-39032075)
chr3 (2-43)||(48438782-48438823)
chr3 (95-151)||(2671194-2671250)
chr3 (1-36)||(1730924-1730959)
chr3 (170-204)||(1306459-1306493)
chr3 (170-204)||(32475927-32475961)
chr3 (170-204)||(32480785-32480819)
chr3 (1-43)||(35926057-35926098)
chr3 (1-43)||(40592260-40592302)
chr3 (1-43)||(40735021-40735063)
chr3 (169-226)||(6716289-6716345)
chr3 (266-322)||(7167538-7167595)
chr3 (14-43)||(43404486-43404515)
chr3 (22-62)||(9634816-9634856)
chr3 (170-225)||(23198269-23198322)
chr3 (166-226)||(45282767-45282826)
[»] scaffold0259 (2 HSPs)
scaffold0259 (95-255)||(1868-2026)
scaffold0259 (1-60)||(1754-1813)
[»] scaffold0028 (2 HSPs)
scaffold0028 (95-255)||(148573-148731)
scaffold0028 (1-60)||(148459-148518)
[»] scaffold0464 (2 HSPs)
scaffold0464 (95-254)||(659-816)
scaffold0464 (1-61)||(870-930)
[»] scaffold0197 (2 HSPs)
scaffold0197 (95-255)||(13913-14071)
scaffold0197 (95-254)||(18793-18950)
[»] scaffold0009 (1 HSPs)
scaffold0009 (95-254)||(176579-176736)
[»] scaffold0286 (2 HSPs)
scaffold0286 (1-109)||(21955-22062)
scaffold0286 (170-204)||(22050-22084)
[»] scaffold0491 (3 HSPs)
scaffold0491 (1-110)||(11629-11737)
scaffold0491 (1-63)||(9230-9292)
scaffold0491 (170-225)||(11493-11546)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-109)||(17447-17554)
[»] scaffold0140 (1 HSPs)
scaffold0140 (1-130)||(7927-8055)
[»] scaffold1455 (1 HSPs)
scaffold1455 (1-61)||(1724-1784)
[»] scaffold0565 (1 HSPs)
scaffold0565 (1-63)||(3108-3170)
[»] scaffold0665 (3 HSPs)
scaffold0665 (95-167)||(8091-8163)
scaffold0665 (1-43)||(8216-8258)
scaffold0665 (48-109)||(8170-8230)
[»] scaffold0674 (2 HSPs)
scaffold0674 (1-62)||(4234-4295)
scaffold0674 (95-150)||(4126-4181)
[»] scaffold0510 (1 HSPs)
scaffold0510 (1-62)||(1099-1160)
[»] scaffold0087 (2 HSPs)
scaffold0087 (1-62)||(43450-43511)
scaffold0087 (1-45)||(36340-36384)
[»] scaffold0006 (3 HSPs)
scaffold0006 (1-62)||(132768-132829)
scaffold0006 (1-43)||(6252-6294)
scaffold0006 (1-43)||(3060-3102)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-61)||(5874-5934)
[»] scaffold1519 (1 HSPs)
scaffold1519 (22-109)||(519-605)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-45)||(45744-45788)
[»] scaffold0036 (1 HSPs)
scaffold0036 (5-43)||(86153-86191)


Alignment Details
Target: chr6 (Bit Score: 188; Significance: 1e-102; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 22010204 - 22010543
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||| |    
T  22010204 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagtta-gtttgcaggacgccaaatcg 22010302  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     |||||||||||||||||| | ||||||||||||||||||||||| ||| |||| ||| |||||||| ||||||||||    
T  22010303 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcaaatcgtgacac 22010402  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatgag 279  Q
    ||||||||||||||||| |||||||||||||| || |||||||  |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  22010403 gatctagggaaatcgtggcacgatttcttcagagggagactag--tatatattgtgttcttgtgcttttttgaagaagaacttaagagagcttgtatgag 22010500  T
Q  280 ctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    ||| |||||||||||||||||||||||||||||||||||||||    
T  22010501 cttagagagagaacttggatagcaaaggagggaaccaatgggt 22010543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 14741941 - 14742283
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||| |||||||||||||||||| |    
T  14741941 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggtcgtgagcta-gtttgcaggacgccaaatcg 14742039  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     |||||||||||||||||| | ||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||    
T  14742040 tggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgggtccgttgcagatcgtgacac 14742139  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgctttttt---gaaggagggcttaagagagcttgtat 276  Q
    |||||| |||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||   ||| ||| | ||||||||||||||||    
T  14742140 gatctaaggaaatcgtggcacgatttcttcaggggaagactag--tatatattgtgttcttgtgcttttttggagaaagagagtttaagagagcttgtat 14742237  T
Q  277 gagctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  14742238 gagctttgagagagaacttggataacaaaggagggaaccaatgggt 14742283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 95 - 322
Target Start/End: Original strand, 14737195 - 14737423
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  14737195 aaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgggtccgttgcagatcgtgacacgatctagggaaatcg 14737294  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgctttttt---gaaggagggcttaagagagcttgtatgagctttgagagaga 291  Q
    || |||||||||||||||||||||||||  ||||||||||||||||||||||||||   ||| |||  ||||||||||||||||||||||||||||||||    
T  14737295 tggcacgatttcttcaggggaagactag--tatatattgtgttcttgtgcttttttggagaaagagaacttaagagagcttgtatgagctttgagagaga 14737392  T
Q  292 acttggatagcaaaggagggaaccaatgggt 322  Q
    ||||||||| |||||||||||||||||||||    
T  14737393 acttggataacaaaggagggaaccaatgggt 14737423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 11857552 - 11857213
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||| |    
T  11857552 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagcta-gtttgcaggacgccaaatcg 11857454  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     |||||||| ||||||||| | |||||||| |||||||||||||| |||||||| ||| |||||||| ||||||||||    
T  11857453 tggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtaacactgataaggacttgtcaaccttgggtccgttgcaaatcgtgacac 11857354  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgctttttt-gaaggagggcttaagagagcttgtatga 278  Q
    ||| | ||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||||||||||||    ||||  |||||||||||||| ||||    
T  11857353 gat-ttgggaaatcgtggcacgatttcttcagaggaagactag--tatatattgtgttcttgtgcttttttactgggagaacttaagagagcttgaatga 11857257  T
Q  279 gctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  11857256 gcttagagagagaacttggatagcaaaggagggaaccaatgggt 11857213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 95 - 253
Target Start/End: Original strand, 28155200 - 28155356
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| |||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28155200 aaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 28155299  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaa 253  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  28155300 tgacacgatttcttcaggggaggactag--tatatattgtgttcttgtgcttttttgaa 28155356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 95 - 254
Target Start/End: Complemental strand, 6438954 - 6438797
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6438954 aaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtcaacctgggaaccgttgcagatcgtgacacgatctagggaaatcg 6438855  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    ||||||||||||||||||| | |||||||||  |||||||||||||||||||||||||||    
T  6438854 tgacacgatttcttcagggaaggactagtat--atattgtgttcttgtgcttttttgaag 6438797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 95 - 251
Target Start/End: Complemental strand, 16839201 - 16839047
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16839201 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttgggaccgttgcagatcgtgacacgatctagggaaatcg 16839102  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttg 251  Q
    ||||||||||||||||||| | |||||||||||| |  |||||||||||||||||||    
T  16839101 tgacacgatttcttcagggcaggactagtatataaa--gtgttcttgtgcttttttg 16839047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 95 - 254
Target Start/End: Original strand, 33330062 - 33330219
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33330062 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 33330161  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    || |||||||||||||||| | ||||||||| || |  ||||||||||||||||||||||    
T  33330162 tggcacgatttcttcagggcaggactagtatttaaa--gtgttcttgtgcttttttgaag 33330219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 95 - 250
Target Start/End: Complemental strand, 6005877 - 6005724
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6005877 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 6005778  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgctttttt 250  Q
    || |||||||||||||||| | ||||||||| || |  ||||||||||||||||||    
T  6005777 tggcacgatttcttcagggcaggactagtatttaaa--gtgttcttgtgctttttt 6005724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 95 - 254
Target Start/End: Original strand, 33335559 - 33335716
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33335559 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 33335658  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    || |||||||||||||||| | ||||||||| || |  |||||| |||||||||||||||    
T  33335659 tggcacgatttcttcagggcaggactagtatttaaa--gtgttcatgtgcttttttgaag 33335716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 95 - 255
Target Start/End: Complemental strand, 5343935 - 5343777
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  5343935 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgttgcatatcgtgacacgatctagggaaatcg 5343836  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaagg 255  Q
    || ||||||||||||||||   |||||||||||| |  |||||||||||||  ||||||||    
T  5343835 tggcacgatttcttcagggctggactagtatataaa--gtgttcttgtgctcatttgaagg 5343777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 30125033 - 30125141
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||| |||| ||||||||||||||||||| |    
T  30125033 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagct-agtttgcaggacgccaaatcg 30125131  T
Q  101 tgacacgatt 110  Q
    || |||||||    
T  30125132 tggcacgatt 30125141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16579086 - 16579024
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  16579086 caaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc 16579024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16616294 - 16616356
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  16616294 caaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc 16616356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27647483 - 27647545
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||    
T  27647483 caaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttc 27647545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 6097970 - 6097822
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||| ||||||||||| |||||| |||||||| |||| |||||||||||||||||  |  ||||| ||||  |||||||||  || |||| |    
T  6097970 caaatttgtggtttggaagaacagggaaatcctgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgctaaatcg 6097872  T
Q  101 tgacacgattcagaaacttgttggttaagtatcactgataaggactggtc 150  Q
    ||||||||||   ||||||| | ||||||| ||  |||||||||||||||    
T  6097871 tgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 6097822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 2172088 - 2171981
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||  |  ||||| ||||  |||||||||  ||||||| |    
T  2172088 caaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcg 2171990  T
Q  101 tgacacgat 109  Q
    |||||||||    
T  2171989 tgacacgat 2171981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3073327 - 3073265
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    ||||||||||||||||||||||||  |||||||||||||| |||| |||||||||||||||||    
T  3073327 caaatttgtggtctggaagaacaggaaaatcgtgacacgaatttggcatcgtgacacgatttc 3073265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16554469 - 16554531
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| |||||||||||| |||||||  ||||||||||||||||    
T  16554469 caaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc 16554531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16631025 - 16631087
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| |||||||||||| |||||||  ||||||||||||||||    
T  16631025 caaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc 16631087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5674245 - 5674306
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||||||||||||||||||||||||||||||||| || |||| |||||||||| |||||    
T  5674245 caaatttgtggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacatgattt 5674306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22709629 - 22709568
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| || |||||||||||||    
T  22709629 caaatttgtggtctggaagaacagagaaatcatgacacgaatttggcaacgtgacacgattt 22709568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23896941 - 23896880
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||| || ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  23896941 caaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattt 23896880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26253605 - 26253666
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||||||||||| |||||||||||||||||||||||| |||| |||||||||| |||||    
T  26253605 caaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacaagattt 26253666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6439068 - 6439008
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||  ||||||||||||||    
T  6439068 caaatttatggtctggaagaacatagaaatcgtgacacgattttggaatcgtgacacgatt 6439008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5266638 - 5266596
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5266638 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 5266596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6136532 - 6136470
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||  |||| |||||||||||    
T  6136532 caaatttgtggtttggaagaacagggaaatcgtgacacgattttggaatcgagacacgatttc 6136470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 14737100 - 14737142
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14737100 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 14737142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 25420812 - 25420874
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||  | ||||||||||||||    
T  25420812 caaatttgtggtctggaagaacagggaaatcgtgacacaattttgggaccgtgacacgatttc 25420874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 34166681 - 34166743
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  34166681 caaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc 34166743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 411701 - 411809
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||| || ||||||||||||||| |||| ||| ||||||| |||||  |  ||||| |||| ||| ||||||  ||||||| |    
T  411701 caaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcattgtgacacaatttcgtggtgccgtgagct-agtctgcagggtgccaaatcg 411799  T
Q  101 tgacacgatt 110  Q
    ||||||||||    
T  411800 tgacacgatt 411809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 225
Target Start/End: Original strand, 5674359 - 5674488
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgacacgatctagggaaatc 193  Q
    |||| |||||||||||  |||||||| | ||||||||||  |||||||||||||||| |||| |||||    ||| |||||||||||||||  |||||||    
T  5674359 aaatcgtgacacgattttgaaacttgctcgttaagtatccgtgataaggactggtcataccttgggacgtacgcaaatcgtgacacgatct--ggaaatc 5674456  T
Q  194 gtgacacgatttcttcaggggaagactagtat 225  Q
    |||||||||||   |||| ||||| |||||||    
T  5674457 gtgacacgattgtatcagaggaaggctagtat 5674488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 5344049 - 5343990
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||||||||| ||| ||||||||||||||||| |||||||| | ||||||||||||||    
T  5344049 caaatttgtggtttgggagaacagagaaatcgtgtcacgatttggtcatcgtgacacgat 5343990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13150864 - 13150926
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  13150864 caaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc 13150926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 14737128 - 14737177
Alignment:
Q  48 atcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaat 98  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  14737128 atcgtgacacgatttcaagtggccgtgagct-agtttgcaggacgccaaat 14737177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28155105 - 28155145
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgat 41  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  28155105 caaatttgtggtctggaagaacagagcaatcgtgacacgat 28155145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5016984 - 5017026
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| |||||||||||| |||||||||||||||||    
T  5016984 caaatttgtggtttggaagaacagaaaaatcgtgacacgattt 5017026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 6026849 - 6026911
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| |||||||| || |||||||||||||||||  | ||| |||||||||||||    
T  6026849 caaatttgtggtttggaagaatagggaaatcgtgacacgattgcggcattgtgacacgatttc 6026911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16652731 - 16652773
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    ||||||||||||||| |||||||| ||||||||||||||||||    
T  16652731 caaatttgtggtctgaaagaacagggaaatcgtgacacgattt 16652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31085961 - 31086003
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| | ||||||||||||||||||||||||||||    
T  31085961 caaatttgtggtttagaagaacagagaaatcgtgacacgattt 31086003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 33342673 - 33342611
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||  |||| ||| |||||||    
T  33342673 caaatttgtggtttggaagaacatggaaatcgtgacacgattttgggatcgcgacgcgatttc 33342611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 34151843 - 34151905
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||  ||||||||||| ||||||||||||||||| ||  |||||||| |||||||    
T  34151843 caaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttc 34151905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 34164459 - 34164521
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||  ||||||||||| ||||||||||||||||| ||  |||||||| |||||||    
T  34164459 caaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttc 34164521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 5266543 - 5266487
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca 151  Q
    |||| ||||||||||||||||||||| |  |||||||||  ||||||||||||||||    
T  5266543 aaatcgtgacacgattcagaaacttgctcattaagtatccttgataaggactggtca 5266487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 16554655 - 16554714
Alignment:
Q  166 gcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaagactagtata 226  Q
    ||||||||||||||||| | |||||||||||||||||||||  ||| ||||| ||||||||    
T  16554655 gcagatcgtgacacgattt-gggaaatcgtgacacgatttcaacagaggaaggctagtata 16554714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 16631211 - 16631270
Alignment:
Q  166 gcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaagactagtata 226  Q
    ||||||||||||||||| | |||||||||||||||||||||  ||| ||||| ||||||||    
T  16631211 gcagatcgtgacacgattt-gggaaatcgtgacacgatttcaacagaggaaggctagtata 16631270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 16652898 - 16652957
Alignment:
Q  166 gcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaagactagtata 226  Q
    ||||||||||||||||| | |||||||||||||||||||||  ||| ||||| ||||||||    
T  16652898 gcagatcgtgacacgattt-gggaaatcgtgacacgatttcaacagaggaaggctagtata 16652957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 6136418 - 6136363
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc 150  Q
    |||| |||||||||| |||||||||| | ||||||||||  |||||||||||||||    
T  6136418 aaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 6136363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16839315 - 16839256
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||||||||| ||||||||||||| ||||||| | |||||| |  |||||||||||||    
T  16839315 caaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 16839256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 205
Target Start/End: Complemental strand, 22709534 - 22709499
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgattt 205  Q
    ||||||||||||||| ||||||||||||||||||||    
T  22709534 atcgtgacacgatcttgggaaatcgtgacacgattt 22709499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 33329948 - 33330007
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||||||||| ||||||||||||| ||||||| | |||||| |  |||||||||||||    
T  33329948 caaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 33330007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 2171993 - 2171959
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgatt 204  Q
    ||||||||||||||| |||||||||||||||||||    
T  2171993 atcgtgacacgatcttgggaaatcgtgacacgatt 2171959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 5266469 - 5266431
Alignment:
Q  189 aaatcgtgacacgatttcttcaggggaagactagtatat 227  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  5266469 aaatcgtgacacgattgcttcagaggaagactagtatat 5266431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 5343954 - 5343920
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgatt 204  Q
    ||||||||||||||| |||||||||||||||||||    
T  5343954 atcgtgacacgatcttgggaaatcgtgacacgatt 5343920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 24714976 - 24714938
Alignment:
Q  5 tttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  24714976 tttgtggtttggaaaaacagagaaatcgtgacacgattt 24714938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 43
Target Start/End: Complemental strand, 603801 - 603772
Alignment:
Q  14 tggaagaacagagaaatcgtgacacgattt 43  Q
    ||||||||||||||||||||||||||||||    
T  603801 tggaagaacagagaaatcgtgacacgattt 603772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 5266610 - 5266550
Alignment:
Q  48 atcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattgtgacacgat 109  Q
    |||||||||||||||| ||  ||||| ||||| |||||||||||||||||| ||| ||||||    
T  5266610 atcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacgccaaatcgtggcacgat 5266550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 18234691 - 18234650
Alignment:
Q  2 aaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    ||||||||||| |||||||||||||||||  |||||||||||    
T  18234691 aaatttgtggtttggaagaacagagaaatgttgacacgattt 18234650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 5413982 - 5413942
Alignment:
Q  22 cagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||||||||||||| |  |||||||||||||||    
T  5413982 cagagaaatcgtgacacgatttggtaatcgtgacacgattt 5413942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 16578900 - 16578861
Alignment:
Q  166 gcagatcgtgacacgatctagggaaatcgtgacacgatttc 206  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  16578900 gcagatcgtgacacgattt-gggaaatcgtgacacgatttc 16578861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 16616480 - 16616519
Alignment:
Q  166 gcagatcgtgacacgatctagggaaatcgtgacacgatttc 206  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  16616480 gcagatcgtgacacgattt-gggaaatcgtgacacgatttc 16616519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 24023834 - 24024173
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||| |  ||||| |||||||||||||||||| |    
T  24023834 caaatttgtggtctggaagaacagagaaatcgtgacacgattgtggcatcgtggcacgatttcaagtggcagagagcta-gtttgcaggacgccaaatcg 24023932  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24023933 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 24024032  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggctta--agagagcttgtatg 277  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    |||||||||||||||||||||| | | | ||  ||||||||||||||    
T  24024033 gatctagggaaatcgtggcacgatttcttcaggggaagactagtatata----gtgttcttgtgcttttttgaagtaagacataagagagagcttgtatg 24024128  T
Q  278 agctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  24024129 agctttgagagagaacttggatagcaaaggagggaaccaatgggt 24024173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 12397477 - 12397150
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggac--------g 92  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||| ||||| ||||||||| |        |    
T  12397477 caaatttgtggtctggaagaacagagaaatcgcgacacgattttggtatcgtgacacgatttcaagtggccgtgagcta-gtttgcaggccatgatcttg 12397379  T
Q  93 ccaaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaat 192  Q
      |||| ||||||||||||||||||||| | ||||||||||||||||||||||| ||| |||| ||| |||||||| ||||||||||||| | |||||||    
T  12397378 ggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcaaatcgtgacacgatttggggaaat 12397279  T
Q  193 cgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtg-cttttttgaaggagggcttaagagagcttgtatgagctttgagagaga 291  Q
    |||| |||||||||||||| |||| ||||||||  |||||||||||||||| ||||||||||| ||  ||||||||||||||||||||||| ||||||||    
T  12397278 cgtggcacgatttcttcagaggaatactagtat--atattgtgttcttgtgccttttttgaagaagaacttaagagagcttgtatgagcttagagagaga 12397181  T
Q  292 acttggatagcaaaggagggaaccaatgggt 322  Q
    |||||||||||||||||||||||||||||||    
T  12397180 acttggatagcaaaggagggaaccaatgggt 12397150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 4873706 - 4873367
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||| |    
T  4873706 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagata-gtttgcaggacgccaaatcg 4873608  T
Q  101 tgacacgat---------------------tcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    || ||||||                     ||||||||||| | ||||||||||||||||||||||| |||  ||| ||| |||||||| ||||||||||    
T  4873607 tggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatcactgataaggacttgtcttccttgggtccgttgcaaatcgtgacac 4873508  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatgag 279  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||  ||||||||||||||||||||||||||| ||  |||||||||||||| | |||    
T  4873507 gatctagggaaatcgtggcacgatttcttcagaggaagactagtat--atattgtgttcttgtgcttttttgaagaagaacttaagagagcttggaagag 4873410  T
Q  280 ctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    ||| ||||||||||||||||| |||||||||||||||||||||    
T  4873409 cttagagagagaacttggataacaaaggagggaaccaatgggt 4873367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 31109085 - 31109423
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||| | ||||||||||||||||||||||||||| |    
T  31109085 caaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtgcctgtaagctaagtttgcaggacgccaaatcg 31109184  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     |||||||||||||||||| ||||||||||| ||||||||||||| |||  ||| ||| |||||||||||||||||||    
T  31109185 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtataactgataaggacttgtctgccttggggccgttgcagatcgtgacac 31109284  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggctta--agagagcttgtatg 277  Q
    ||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||     ||||  ||||||||||||||    
T  31109285 gatctagggaaatcgtggcacgatttcttcagaggaagactag--tatatattgtgttcttgtgcttttttgaagataaacttaagagagagcttgtatg 31109382  T
Q  278 agctt-tgagag-agaacttggatagcaaaggagggaacca 316  Q
    |||||  ||||| | ||||||||||||||||||||||||||    
T  31109383 agcttaagagagaaaaacttggatagcaaaggagggaacca 31109423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 12406842 - 12406594
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| |||||||||| |    
T  12406842 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagcta-gtttgcaagacgccaaatcg 12406744  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     |||||||||||||||||| | ||||||||||||||||||||||| ||| |||| ||| |||||||| ||||||||||    
T  12406743 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcaaatcgtgacac 12406644  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatat 229  Q
    ||| | ||||||||||| |||||||||||||| |||||||||||||||||    
T  12406643 gatttggggaaatcgtggcacgatttcttcagaggaagactagtatatat 12406594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 95 - 255
Target Start/End: Complemental strand, 16880531 - 16880373
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16880531 aaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 16880432  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaagg 255  Q
    || |||||||||||| ||| | ||||||||| || |  |||||||||||||  ||||||||    
T  16880431 tggcacgatttcttctgggcaggactagtatttaaa--gtgttcttgtgctcatttgaagg 16880373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 95 - 255
Target Start/End: Complemental strand, 16885386 - 16885228
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16885386 aaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 16885287  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaagg 255  Q
    || |||||||||||| ||| | ||||||||| || |  |||||||||||||  ||||||||    
T  16885286 tggcacgatttcttctgggcaggactagtatttaaa--gtgttcttgtgctcatttgaagg 16885228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 95 - 255
Target Start/End: Original strand, 24265806 - 24265964
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24265806 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcg 24265905  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaagg 255  Q
    || ||||||||| |||||  | ||||||||| || |  ||||||||||||| |||||||||    
T  24265906 tggcacgatttcctcaggacaggactagtatttaaa--gtgttcttgtgctcttttgaagg 24265964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 95 - 254
Target Start/End: Original strand, 21811868 - 21812025
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| |||||||||| |||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||| ||| |||||||| |||||||||    
T  21811868 aaatcgtgacacgatccagaaacttgctagttaagtatctctgataaggactggtcaacctggagaccgttgcagattgtgtcacgatcttgggaaatcg 21811967  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    || ||||||||  |||||| | ||||||  ||||||||||||||||||||||||||||||    
T  21811968 tggcacgatttactcagggcaggactag--tatatattgtgttcttgtgcttttttgaag 21812025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 95 - 255
Target Start/End: Original strand, 24260950 - 24261108
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||| || ||||||||| | |||||||||||||||||||||||||    
T  24260950 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttgaggaccgttgaaaatcgtgacacgatctagggaaatcg 24261049  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaagg 255  Q
    || ||||||||| |||||  | ||||||||| || |  |||||||||||||  ||||||||    
T  24261050 tggcacgatttcatcaggacaggactagtatttaaa--gtgttcttgtgctcatttgaagg 24261108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 2058589 - 2058261
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgcc------ 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | || ||||| |||| |||||||||||||||          
T  2058589 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttgaggt-gccgtgagct-agtttgcaggacgccaaatcg 2058492  T
Q  95 ---------------aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgaca 178  Q
                   |||| ||||||||||||||||||||| | ||||||||||  |||||||||||||||| |||| |||      ||| |||||||||    
T  2058491 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgaca 2058392  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatga 278  Q
    ||||||  |||||||||| ||||||| |||||| ||||| ||||  ||||||||||||||||||||   ||||||         ||||||||||| | ||    
T  2058391 cgatct--ggaaatcgtggcacgattgcttcagaggaaggctag--tatatattgtgttcttgtgcagatttgaa---------aagagagcttggaaga 2058305  T
Q  279 gctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    |||| ||||||||||||||||  |||||||||||||||| ||||    
T  2058304 gcttagagagagaacttggattacaaaggagggaaccaaagggt 2058261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 20357043 - 20357150
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||| ||||||||||||||||||| |    
T  20357043 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagct-agtttgcaggacgccaaatcg 20357141  T
Q  101 tgacacgat 109  Q
    || ||||||    
T  20357142 tggcacgat 20357150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 21640408 - 21640301
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||| |||| ||||||||||||||||||| |    
T  21640408 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagct-agtttgcaggacgccaaatcg 21640310  T
Q  101 tgacacgat 109  Q
    |||||||||    
T  21640309 tgacacgat 21640301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39730949 - 39731010
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  39730949 caaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 39731010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 24789442 - 24789549
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||  |  ||||| |||| ||||||||||  ||||||| |    
T  24789442 caaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagct-agtttgcagggtgccaaatcg 24789540  T
Q  101 tgacacgat 109  Q
    || ||||||    
T  24789541 tggcacgat 24789549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 43504705 - 43504598
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||  |  ||||| ||||  |||||||||  ||||||| |    
T  43504705 caaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcg 43504607  T
Q  101 tgacacgat 109  Q
    |||||||||    
T  43504606 tgacacgat 43504598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 1532900 - 1532958
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacga 59  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  1532900 caaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacga 1532958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1562572 - 1562510
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  1562572 caaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc 1562510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6592906 - 6592844
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  6592906 caaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc 6592844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 32060873 - 32060811
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  32060873 caaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc 32060811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 47264251 - 47264190
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  47264251 caaatttgtggtttggaagaatagagaaatcgtgacacgattttggcatcgtgacacgattt 47264190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48408414 - 48408475
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||    
T  48408414 caaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 48408475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 18414259 - 18414152
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| ||||||| ||||||||   |  ||||| ||||  ||||||||| |||||||| |    
T  18414259 caaatttatggtctggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtggtgccgtgagct-ggtttgcagggcgccaaatcg 18414161  T
Q  101 tgacacgat 109  Q
    |||||||||    
T  18414160 tgacacgat 18414152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 21646627 - 21646520
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||| ||||||||||||||||||||||||| | |||| |||||||||||||||||  |  ||||| ||||  |||||||||  ||||||| |    
T  21646627 caaatttgtggtttggaagaacagagaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcg 21646529  T
Q  101 tgacacgat 109  Q
    |||||||||    
T  21646528 tgacacgat 21646520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21811754 - 21811813
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  21811754 caaatttgtggtctggaagaacagaggaatcgtgtcacgattttgccatcgtgacacgat 21811813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6595122 - 6595060
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||    
T  6595122 caaatttgtggtctggaaaaacagggaaatcgtgacacgattttgggatcgtgacacgatttc 6595060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 20343515 - 20343577
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||| ||||| || |||||||||||||||||    
T  20343515 caaatttgtggtctggaagaacagggaaatcgtgacgcgattgtggcatcgtgacacgatttc 20343577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2479944 - 2479883
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||| || |||||||||||||| |||||||||||||| ||||||||||||||||    
T  2479944 caaatttgtggtttgtaagaacagagaaattgtgacacgattttggcatcgtgacacgattt 2479883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18409383 - 18409322
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||    
T  18409383 caaatttgtgttctggaagaacagagaaatcgtaacacgaatttggcatcgtgacacgattt 18409322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21983851 - 21983790
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||||    
T  21983851 caaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcatcgtgacacgattt 21983790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44847635 - 44847696
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||    
T  44847635 caaatttgtggtttaaaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 44847696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21989515 - 21989454
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||| |||||||||||||||||||||||| |||||   ||||||||||||||||    
T  21989515 caaatttgtggtttggaagaacagagaaatcgtgacaagatttcatcatcgtgacacgattt 21989454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 95 - 257
Target Start/End: Original strand, 24789556 - 24789715
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgacacgatctagggaaatc 193  Q
    |||| |||||||||||  |||||||| | ||||||||||  |||||||||||||||| |||| |||      ||| ||| ||||||||| |  |||||||    
T  24789556 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcttgacacgattt--ggaaatc 24789653  T
Q  194 gtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggag 257  Q
    ||||||||||| |||||| ||||| |||||||||| |  |||||||||||| | ||||||||||    
T  24789654 gtgacacgattgcttcagaggaaggctagtatataaa--gtgttcttgtgcatctttgaaggag 24789715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18392765 - 18392705
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||  ||||||||||||||    
T  18392765 caaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgatt 18392705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 322
Target Start/End: Original strand, 20357231 - 20357351
Alignment:
Q  189 aaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatgagctttgagag 288  Q
    |||||||| ||||||| |||||| ||||||||||  |||||||||||||||||||| |||||||||          |||||||||   |||||| | |||    
T  20357231 aaatcgtggcacgattgcttcagaggaagactag--tatatattgtgttcttgtgc-tttttgaag----------gagagcttggtagagcttagtgag 20357317  T
Q  289 agaacttggatagcaaaggagggaaccaatgggt 322  Q
    |||||||||||| |||||||||||||||| ||||    
T  20357318 agaacttggataacaaaggagggaaccaaagggt 20357351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 21640289 - 21640238
Alignment:
Q  100 gtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca 151  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  21640289 gtgacacgattcagaaacttgctcattaagtatcactgataaggactggtca 21640238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 242
Target Start/End: Original strand, 1533033 - 1533177
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgacacgatctagggaaatc 193  Q
    |||| |||||||||||  |||||||  | ||||||||||  |||||||||||||| | |||| |||||     || |||||||||||||||  |||||||    
T  1533033 aaatcgtgacacgattgtgaaacttactcgttaagtatccttgataaggactggttataccttgggacatacacaaatcgtgacacgatct--ggaaatc 1533130  T
Q  194 gtgacacgatttcttcaggggaagactagtatatatattgtgttcttgt 242  Q
    ||| ||||||| |||||| ||||| ||||||||||||  ||||||||||    
T  1533131 gtggcacgattgcttcagaggaaggctagtatatata--gtgttcttgt 1533177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 262
Target Start/End: Complemental strand, 21640220 - 21640149
Alignment:
Q  189 aaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggctt 262  Q
    |||||||||||||||| ||||||  | ||||||||||||||  |||||||||||||| ||||||||||| ||||    
T  21640220 aaatcgtgacacgattgcttcagaaggagactagtatatat--tgtgttcttgtgctattttgaaggagagctt 21640149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16880645 - 16880586
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||| ||||| ||||||| ||||| ||||||| |||||||||| ||||||||||||||    
T  16880645 caaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacgat 16880586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16885500 - 16885441
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||| ||||| ||||||| ||||| ||||||| |||||||||| ||||||||||||||    
T  16885500 caaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacgat 16885441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 24260836 - 24260895
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||||||||| ||| ||||||||| ||||||| |||||||| | ||||||||||||||    
T  24260836 caaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 24260895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 79997 - 79955
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  79997 caaatttgtgatttggaagaacagagaaatcgtgacacgattt 79955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 204
Target Start/End: Complemental strand, 6592792 - 6592683
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtgacacgatctagggaaatc 193  Q
    |||| |||||||||| |||||||||| | ||||||||||  |||||||||||||||   ||| ||||| |  ||| ||||||||||||| | || |||||    
T  6592792 aaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgat-tgggaaaatc 6592694  T
Q  194 gtgacacgatt 204  Q
    |||||||||||    
T  6592693 gtgacacgatt 6592683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 204
Target Start/End: Complemental strand, 6595008 - 6594899
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtgacacgatctagggaaatc 193  Q
    |||| |||||||||| |||||||||| | ||||||||||  |||||||||||||||   ||| ||||| |  ||| ||||||||||||| | || |||||    
T  6595008 aaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgat-tgggaaaatc 6594910  T
Q  194 gtgacacgatt 204  Q
    |||||||||||    
T  6594909 gtgacacgatt 6594899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 49092280 - 49092237
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgatttt 44  Q
    ||||||||| || ||||||||||||||||| |||||||||||||    
T  49092280 caaatttgtagtttggaagaacagagaaattgtgacacgatttt 49092237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 204
Target Start/End: Original strand, 1533014 - 1533048
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgatt 204  Q
    ||||||||||||||| |||||||||||||||||||    
T  1533014 atcgtgacacgatcttgggaaatcgtgacacgatt 1533048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 21640313 - 21640279
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgatt 204  Q
    ||||||||||||||| |||||||||||||||||||    
T  21640313 atcgtgacacgatcttgggaaatcgtgacacgatt 21640279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 204
Target Start/End: Original strand, 24260931 - 24260965
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgatt 204  Q
    ||||||||||||||| |||||||||||||||||||    
T  24260931 atcgtgacacgatcttgggaaatcgtgacacgatt 24260965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 25767524 - 25767422
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||      |||||||||||||| | |||| |||||||||||||||||  |  ||||| ||||  |||||||||  ||||||| |    
T  25767524 caaatttgtggtctggaa------agaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcg 25767432  T
Q  101 tgacacgatt 110  Q
    ||||||||||    
T  25767431 tgacacgatt 25767422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 43
Target Start/End: Original strand, 46515831 - 46515860
Alignment:
Q  14 tggaagaacagagaaatcgtgacacgattt 43  Q
    ||||||||||||||||||||||||||||||    
T  46515831 tggaagaacagagaaatcgtgacacgattt 46515860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 184; Significance: 1e-99; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 9228701 - 9229040
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  |||||||||||||||||| |    
T  9228701 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctc-gtttgcaggacgccaaatcg 9228799  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     |||||||||||||||||| | ||||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||    
T  9228800 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcagatcgtgacac 9228899  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatgag 279  Q
    ||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||     ||||||||||||||||||||    
T  9228900 gatctagggaaatcgtggcacgatttcttcagaggaagactag--tatatattgtgttcttgtgcttttttgaagtgaatcttaagagagcttgtatgag 9228997  T
Q  280 ctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    ||| |||||||||||||||||||||||||||||||||||||||    
T  9228998 cttagagagagaacttggatagcaaaggagggaaccaatgggt 9229040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 9223914 - 9224253
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||| |    
T  9223914 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagcta-gtttgcaggacgccaaatcg 9224012  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     |||||||||||||||||| | ||||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||    
T  9224013 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcagatcgtgacac 9224112  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatgag 279  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||  |||||||||||||||| |||||||||||||     ||||||||||||||||||||    
T  9224113 gatctagggaaatcgtggcacaatttcttcagaggaagactag--tatatattgtgttcttctgcttttttgaagtgaatcttaagagagcttgtatgag 9224210  T
Q  280 ctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    ||| |||||||||||||||||||||||||||||||||||||||    
T  9224211 cttagagagagaacttggatagcaaaggagggaaccaatgggt 9224253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 3814590 - 3814320
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| |||||||||| |    
T  3814590 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagc-aagtttgcaagacgccaaatcg 3814492  T
Q  101 tg--------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacg 180  Q
    ||                    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |    
T  3814491 tgtcacgatttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctgagaaccgttgcagatcgtgacaag 3814392  T
Q  181 atctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  3814391 atctagggaaatcgtgacacgatttcttcaggggaagactagtat--atattgtgttcttgtgcttttttgaag 3814320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 25 - 322
Target Start/End: Original strand, 18712294 - 18712612
Alignment:
Q  25 agaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattgtg---------------------a 103  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||                     |    
T  18712294 agaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagcta-gtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtga 18712392  T
Q  104 cacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgat 203  Q
    ||||||||||||||||| | ||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||| ||||||| |||||||| ||||||    
T  18712393 cacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgggtccgttgaagatcgtgacacaatctaggaaaatcgtggcacgat 18712492  T
Q  204 ttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaag---agagcttgtatgagctttgagagagaacttggata 300  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| | | ||||||   ||| |||    ||||||| ||||||||||||||||    
T  18712493 ttcttcaggggaagactag--tatatattgtgttcttgtgcttttttgaagtaagacttaagagaagaacttaagagagcttttagagagaacttggata 18712590  T
Q  301 gcaaaggagggaaccaatgggt 322  Q
    ||||||||||||||||||||||    
T  18712591 gcaaaggagggaaccaatgggt 18712612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 51521035 - 51520696
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| |||||||||||||||||| |    
T  51521035 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagcta-gtttgcaggacgccaaatcg 51520937  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     |||||||||||||||||| | |||||||||| ||||||||||||| || |||| ||| | |  ||| ||||||||||    
T  51520936 tggcacgatcttgggaaatcatgacacgattcagaaacttgctcgttaagtatccctgataaggactgatctaccttgggtcagacgcaaatcgtgacac 51520837  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttg-aaggagggcttaagagagcttgtatga 278  Q
    ||| | ||||||||||| ||| ||| |||||| ||||| |||||||||||  |||||||||||||||||||  ||| ||| |||||||||||||| ||||    
T  51520836 gattt-gggaaatcgtggcacaattgcttcagaggaaggctagtatatat--tgtgttcttgtgcttttttacaagtaggacttaagagagcttgaatga 51520740  T
Q  279 gctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    |||| |||||||||||||||||| ||||||||||||||||||||    
T  51520739 gcttagagagagaacttggatagaaaaggagggaaccaatgggt 51520696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 5733232 - 5732961
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgt-aagctaagtttgcaggacgccaaatt 99  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||  |  ||||| |||| ||||||||||||||||||||     
T  5733232 caaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagc-aagtttgcaggacgccaaatc 5733134  T
Q  100 gtgacacgat---------------------tcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgaca 178  Q
    ||||||||||                     ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5733133 gtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgaca 5733034  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||  |||||||||||||||| ||||||||||    
T  5733033 cgatctagggaaatcgtggcacgatttcttcaggggaggactagtat--atattgtgttcttgtg-ttttttgaag 5732961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 95 - 254
Target Start/End: Complemental strand, 18856180 - 18856023
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  18856180 aaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctgggaaccgttgcagatcgtgacatgatctagggaaatcg 18856081  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    || ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  18856080 tggcacgatttcttcaggggaagactagtat--atattgtgttcttgtgcttttttgaag 18856023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 95 - 254
Target Start/End: Original strand, 45347446 - 45347603
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45347446 aaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctgggaaccgttgcagatcgtgacacgatctagggaaatcg 45347545  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    || ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  45347546 tggcacgatttcttcaggggaaaactag--tatatattgtgttcttgtgcttttttgaag 45347603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 95 - 254
Target Start/End: Original strand, 45356927 - 45357084
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45356927 aaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctgggaaccgttgcagatcgtgacacgatctagggaaatcg 45357026  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    ||||||||||||||| ||||| ||||||  ||||||||||||||||||||||||||||||    
T  45357027 tgacacgatttcttctggggaggactag--tatatattgtgttcttgtgcttttttgaag 45357084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 56141526 - 56141797
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaa---- 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  || || ||| ||||| ||||||||||||||||        
T  56141526 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttggaggggtcgtgagcta-gtttgcaggacgccaaaatc 56141624  T
Q  97 ------------------attgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgaca 178  Q
                      || ||||||||||||||||||||| | |||||||||| |||||||||||||||| |||| ||| | | |||| |||||||||    
T  56141625 gtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagatgcaaatcgtgaca 56141724  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaa 253  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  56141725 cgatcttgggaaatcgtggcacgatttcttcagaggaagactag--tatatattgtgttcttgtgcttttttgaa 56141797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 24742562 - 24742302
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||| ||||| |||||||||||||||||| |    
T  24742562 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacgccaaatcg 24742464  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgaca 178  Q
    ||                     |||||||||||||||||| | ||||||||||  |||||||||||||||| ||||||| || |  ||| |||||| ||    
T  24742463 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacggacgcaaatcgtgcca 24742364  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgc 244  Q
    ||||||  ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||    
T  24742363 cgatct--ggaaatcgtgacacgatttcttcagaggaagactagtat--atattgtgttcttgtgc 24742302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 13992863 - 13992801
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  13992863 caaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttc 13992801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 31495886 - 31495778
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||  |  ||||| ||||  |||||||||  ||||||| |    
T  31495886 caaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcg 31495788  T
Q  101 tgacacgatt 110  Q
    ||||||||||    
T  31495787 tgacacgatt 31495778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18856294 - 18856234
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  18856294 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 18856234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18860506 - 18860446
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  18860506 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 18860446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 8392997 - 8393059
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  8392997 caaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc 8393059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 8395206 - 8395268
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  8395206 caaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc 8395268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45347332 - 45347392
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||    
T  45347332 caaatttgtggtctggaagaacaaagaaatcgtgacacgattttggaatcgtgacacgatt 45347392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 7122282 - 7122344
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  7122282 caaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc 7122344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 7124504 - 7124566
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  7124504 caaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc 7124566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28467993 - 28468054
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||| ||||||||||||||||||||||||||| |||| |||||| |||||||||    
T  28467993 caaatttgtggtatggaagaacagagaaatcgtgacacgaatttggcatcgtaacacgattt 28468054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31985143 - 31985204
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||| |||| |||||||||||||||||||||||| |||| ||||||||||||||||    
T  31985143 caaatttgtgatctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 31985204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29761224 - 29761182
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29761224 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 29761182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5148286 - 5148225
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||| |||||||| ||||||||||||||||||||||  || |||||||||||||    
T  5148286 caaatttgtggtttggaagaatagagaaatcgtgacacgattttatcaccgtgacacgattt 5148225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5143851 - 5143807
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttg 45  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  5143851 caaatttgtggtttggaagaacagagaaatcgtgacacgattttg 5143807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8689052 - 8689096
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttg 45  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  8689052 caaatttgtggtttggaagaacagagaaatcgtgacacgattttg 8689096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5135664 - 5135726
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  5135664 caaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc 5135726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5137890 - 5137952
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  5137890 caaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc 5137952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16628361 - 16628403
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  16628361 caaatttgtggtttggaagaacagagaaatcgtgacacgattt 16628403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 38151926 - 38151968
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  38151926 caaatttgtggtttggaagaacagagaaatcgtgacacgattt 38151968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3778157 - 3778116
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgatt 42  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  3778157 caaatttgtggtttggaagaacagagaaatcgtgacacgatt 3778116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 16622783 - 16622824
Alignment:
Q  2 aaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  16622783 aaatttgtggtttggaagaacagagaaatcgtgacacgattt 16622824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 29761055 - 29761002
Alignment:
Q  189 aaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgc 244  Q
    |||||||| |||||||||||||| |||||||||||||  |||||||||||||||||    
T  29761055 aaatcgtggcacgatttcttcagaggaagactagtat--atattgtgttcttgtgc 29761002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 29761129 - 29761073
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca 151  Q
    |||| ||||||||||||||||||||| | ||||||||||  ||||||||||||||||    
T  29761129 aaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 29761073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5268707 - 5268750
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgatttt 44  Q
    |||||||||||| |||||||||||||||||||||||| ||||||    
T  5268707 caaatttgtggtttggaagaacagagaaatcgtgacaggatttt 5268750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6742904 - 6742946
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    ||||||| |||| ||||||||||||||||||||||||||||||    
T  6742904 caaatttatggtttggaagaacagagaaatcgtgacacgattt 6742946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 204
Target Start/End: Original strand, 7122396 - 7122505
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtgacacgatctagggaaatc 193  Q
    |||| |||||||||| |||||||||| | ||||||||||  |||||||||||||||   ||| ||||| |  ||| ||||||||||||| | || |||||    
T  7122396 aaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgat-tgggaaaatc 7122494  T
Q  194 gtgacacgatt 204  Q
    |||||||||||    
T  7122495 gtgacacgatt 7122505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10047974 - 10047932
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| |||||||||||| |||||||||||||||||    
T  10047974 caaatttgtggtttggaagaacagataaatcgtgacacgattt 10047932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 8393183 - 8393242
Alignment:
Q  166 gcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaagactagtata 226  Q
    ||||||||||||||||| | |||||||||||||||||||||  ||| ||||| ||||||||    
T  8393183 gcagatcgtgacacgattt-gggaaatcgtgacacgatttcaacagaggaaggctagtata 8393242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 8395392 - 8395451
Alignment:
Q  166 gcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaagactagtata 226  Q
    ||||||||||||||||| | |||||||||||||||||||||  ||| ||||| ||||||||    
T  8395392 gcagatcgtgacacgattt-gggaaatcgtgacacgatttcaacagaggaaggctagtata 8395451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 13992671 - 13992618
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaagactagtat 225  Q
    |||||||||||||||  |||||||||||||||||||  |||| |||||||||||||    
T  13992671 atcgtgacacgatct--ggaaatcgtgacacgattttatcagtggaagactagtat 13992618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 7124618 - 7124673
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc 150  Q
    |||| |||||||||| |||||||||| | ||||||||||  |||||||||||||||    
T  7124618 aaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 7124673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 8393111 - 8393166
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc 150  Q
    |||| |||||||||| |||||||||| | ||||||||||  |||||||||||||||    
T  8393111 aaatcgtgacacgatccagaaacttgctcgttaagtatccgtgataaggactggtc 8393166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36314719 - 36314761
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| | |||||| |||||||||||||||||||||    
T  36314719 caaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36314761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36328928 - 36328970
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| | |||||| |||||||||||||||||||||    
T  36328928 caaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36328970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 54867787 - 54867745
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| |||||||| |||||| ||||||||||||||    
T  54867787 caaatttgtggtttggaagaatagagaagtcgtgacacgattt 54867745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 29761196 - 29761136
Alignment:
Q  48 atcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattgtgacacgat 109  Q
    |||||||||||||||| ||  ||||| ||||| |||||||||||||||||| ||| ||||||    
T  29761196 atcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacgccaaatcgtggcacgat 29761136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 179; Significance: 1e-96; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 39811492 - 39811829
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||| |    
T  39811492 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagc-aagtttgcaggacgccaaatcg 39811590  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     |||||||||||||||||| ||||||||||||||||||||||||| |||  ||| ||| |||||||||||||||||||    
T  39811591 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggacttgtctgccttggggccgttgcagatcgtgacac 39811690  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggctta--agagagcttgtatg 277  Q
    ||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||||||||||||||| ||| ||||  ||||||||||||||    
T  39811691 gatctagggaaatcgtggcacgatttcttcagaggaagactag--tatatattgtgttcttgtgcttttttgaagtaggacttaagagagagcttgtatg 39811788  T
Q  278 agctttg-agagagaacttggatagcaaaggagggaaccaa 317  Q
    ||||||| | |||||||||||||||||||||||||||||||    
T  39811789 agctttgtacagagaacttggatagcaaaggagggaaccaa 39811829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 32247337 - 32247091
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |  || |||| ||| |||||||| ||| || |||| |    
T  32247337 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatg-ccgtgagccaagtttgctggatgcaaaatcg 32247239  T
Q  101 tgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtgacac 200  Q
    || ||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  32247238 tggcacgattcagaaacttgctcgttaagtatcactgataaagactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcac 32247139  T
Q  201 gatttcttcaggggaagactagtatatatattgtgttcttgtgctttttt 250  Q
    ||||||||||||||| |||||||||  ||||||||||||||||| |||||    
T  32247138 gatttcttcaggggaggactagtat--atattgtgttcttgtgccttttt 32247091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 95 - 251
Target Start/End: Complemental strand, 19349738 - 19349584
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19349738 aaatcgtgacacgattcagaaacttgttggttaagtatctctgataaggactggtcaacctgaggaccgttgcagatcgtgacacgatctagggaaatcg 19349639  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttg 251  Q
    || |||||||||||||||| | ||||||||| || |  |||||||||||||||||||    
T  19349638 tggcacgatttcttcagggcaggactagtatttaaa--gtgttcttgtgcttttttg 19349584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 95 - 251
Target Start/End: Complemental strand, 19344880 - 19344726
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19344880 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatcatgacacgatctagggaaatcg 19344781  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttg 251  Q
    || |||||||||||||||| | ||||||||| || |  |||||||||||||||||||    
T  19344780 tggcacgatttcttcagggcaggactagtatttaaa--gtgttcttgtgcttttttg 19344726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 9295877 - 9296155
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgcc------ 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||| ||||||||||| |||          
T  9295877 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagct-agtttgcaggatgccaaatcg 9295975  T
Q  95 ---------------aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgaca 178  Q
                   |||| ||||||||||||||||||||| |  |||||||||  |||||||||||||||| |||| ||| | |  ||| |||||||||    
T  9295976 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataaggactggtcataccttgggtcggacgcaaatcgtgaca 9296075  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggctt 262  Q
    ||||||  | |||||||||||||||| |||||| ||||||||||||| || |  ||||||||||||||||||| ||||| ||||    
T  9296076 cgatct--gaaaatcgtgacacgattgcttcagaggaagactagtatttaaa--gtgttcttgtgcttttttggaggagagctt 9296155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 11098402 - 11098662
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgcc------ 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  ||||| |||| |||||||||||||||          
T  11098402 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatagtgacacgatttcaaggtgccgtgagct-agtttgcaggacgccaaatcg 11098500  T
Q  95 ---------------aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtgaca 178  Q
                   |||| ||||||||||| ||||||||| | ||||||||||||||||||||||||||| ||||| |||      ||| |||||||||    
T  11098501 tggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatcactgataaggactggtcaaaccttgggttgtacgcaaatcgtgaca 11098600  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgc 244  Q
    ||||||  |||||||||| |||||||||||||| ||||||||||   |||||||||||||||||||    
T  11098601 cgatct--ggaaatcgtggcacgatttcttcagaggaagactag--catatattgtgttcttgtgc 11098662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 14292110 - 14291850
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgcc------ 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||  ||||| |||| |||||||||||||||          
T  14292110 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatctcgaggtgccgtgagct-agtttgcaggacgccaaatcg 14292012  T
Q  95 ---------------aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgaca 178  Q
                   |||| ||||||||||||||||||||| | |||||||| ||||||||||||||||||| |||| |||      ||| |||||||||    
T  14292011 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtaccactgataaggactggtcataccttgggttgtacgcaaatcgtgaca 14291912  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgc 244  Q
    ||||||  |||||||||| |||||||||||||| ||||||||||  ||||||||||||||||||||    
T  14291911 cgatct--ggaaatcgtggcacgatttcttcagaggaagactag--tatatattgtgttcttgtgc 14291850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 44310486 - 44310558
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgt 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44310486 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgt 44310558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 4484907 - 4484800
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |  ||||| |||| ||||||||||  ||||||| |    
T  4484907 caaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagct-agtttgcagggtgccaaatcg 4484809  T
Q  101 tgacacgat 109  Q
    |||||||||    
T  4484808 tgacacgat 4484800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 30832937 - 30833044
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||  |  ||||| ||||  |||||||||  ||||||| |    
T  30832937 caaatttgtggtctggaagaacagagaaatcgtgacatgaatttgacatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcg 30833035  T
Q  101 tgacacgat 109  Q
    |||||||||    
T  30833036 tgacacgat 30833044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25410250 - 25410189
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  25410250 caaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 25410189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32289164 - 32289225
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  32289164 caaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 32289225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 12647952 - 12647890
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  12647952 caaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc 12647890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 6266290 - 6266398
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||  |  ||||| ||||  |||||||||  ||||||| |    
T  6266290 caaatttgtggtctggaagaacatggaaatcgtgacacgaatttgacatcgtgacacaatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcg 6266388  T
Q  101 tgacacgatt 110  Q
    ||||||||||    
T  6266389 tgacacgatt 6266398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40739441 - 40739380
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||    
T  40739441 caaatttgtggtctggaagaacagacaaatcgtgacacgaatttggcatcgtgacacgattt 40739380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3492361 - 3492300
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||| ||||||||||||||||    
T  3492361 caaatttgtggtctgaaagaacagagaaattgtgacacgaatttggcatcgtgacacgattt 3492300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 36757433 - 36757480
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgaca 48  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  36757433 caaatttgtggtttggaagaacagaaaaatcgtgacacgattttgaca 36757480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8389639 - 8389681
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  8389639 caaatttgtggtttggaagaacagagaaatcgtgacacgattt 8389681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28258685 - 28258729
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttg 45  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  28258685 caaatttgtggtttggaaaaacagagaaatcgtgacacgattttg 28258729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10706741 - 10706783
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    ||||||||| || ||||||||||||||||||||||||||||||    
T  10706741 caaatttgttgtttggaagaacagagaaatcgtgacacgattt 10706783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21630553 - 21630511
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    ||||||||| || ||||||||||||||||||||||||||||||    
T  21630553 caaatttgtagtttggaagaacagagaaatcgtgacacgattt 21630511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33528113 - 33528155
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| ||||||||||||||||||||||||| ||||    
T  33528113 caaatttgtggtttggaagaacagagaaatcgtgacacaattt 33528155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39483485 - 39483443
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| ||||||||||||||||| ||||||||||||    
T  39483485 caaatttgtggtttggaagaacagagaaattgtgacacgattt 39483443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 20522830 - 20522794
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgaca 37  Q
    |||||||||||| ||||||||||||||||||||||||    
T  20522830 caaatttgtggtttggaagaacagagaaatcgtgaca 20522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 205
Target Start/End: Complemental strand, 25410155 - 25410120
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgattt 205  Q
    ||||||||||||||| ||||||||||||||||||||    
T  25410155 atcgtgacacgatcttgggaaatcgtgacacgattt 25410120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 30833032 - 30833067
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgattt 205  Q
    ||||||||||||||| ||||||||||||||||||||    
T  30833032 atcgtgacacgatcttgggaaatcgtgacacgattt 30833067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 3492266 - 3492232
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgatt 204  Q
    ||||||||||||||| |||||||||||||||||||    
T  3492266 atcgtgacacgatcttgggaaatcgtgacacgatt 3492232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 23077968 - 23078002
Alignment:
Q  9 tggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||| ||||||||||||||||||||||||||||||    
T  23077968 tggtttggaagaacagagaaatcgtgacacgattt 23078002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 35522171 - 35522138
Alignment:
Q  29 atcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||||||||||| ||||||||||||||||||    
T  35522171 atcgtgacacgatttggacatcgtgacacgattt 35522138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 4484715 - 4484662
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaagactagtat 225  Q
    |||||||||||||||  |||||||||||||||||||  |||| ||||| |||||||    
T  4484715 atcgtgacacgatct--ggaaatcgtgacacgattttatcagtggaaggctagtat 4484662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 3352 - 3689
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| |    
T  3352 caaatttgtggtctggaagaaaagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtgagcta-gtttgaaggacgccaaatcg 3450  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     |||||||||||||||||| | ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  3451 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcaatgataaggactagtcaacctggggaccgttgcagatcgtgacac 3550  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgctttttt--gaaggagggcttaagagagcttgtatg 277  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||  | || ||  |||||||||| |||||||    
T  3551 gatctaggaaaatcgtgacacgatttcttcaggggaagactagtatatat--tgtattcttgtgcttttttttgtagaagaacttaagagagattgtatg 3648  T
Q  278 agctttg-agagagaacttggatagcaaaggagggaaccaa 317  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  3649 agctttgtagagagaacttggatagcaaaggagggaaccaa 3689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 174; Significance: 1e-93; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 95 - 322
Target Start/End: Complemental strand, 15045151 - 15044925
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15045151 aaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcaacctggggtccgttgcagatcgtgacacgatctagggaaatcg 15045052  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatgagctttg-agagagaac 293  Q
    || ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||    
T  15045051 tggcacgatttcttcaggggaagactagtat--atattgtgttcttgtgcttttttgaagaagaacttaagagagcttgtatgagctttgtagagagaac 15044954  T
Q  294 ttggatagcaaaggagggaaccaatgggt 322  Q
    |||||||||||||||||||||||||||||    
T  15044953 ttggatagcaaaggagggaaccaatgggt 15044925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 27450394 - 27450053
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgcc------ 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| |||||||||||||||          
T  27450394 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagct-agtttgcaggacgccaaatcg 27450296  T
Q  95 ---------------aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
                   |||| ||||||||||||||||||||| | |||||||||| |||||||||||||||| |||| ||| | |  ||| ||||||||||    
T  27450295 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaatcgtgacac 27450196  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgctttttt---gaaggagggcttaagagagcttgtat 276  Q
    ||| | ||||||||||| ||||||| |||||| ||||| ||||  ||||||||||||||||||||||||||    ||  |   |||||||||||||| ||    
T  27450195 gat-ttgggaaatcgtggcacgattgcttcagaggaaggctag--tatatattgtgttcttgtgcttttttacaaaaaaaaaacttaagagagcttgaat 27450099  T
Q  277 gagctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  27450098 gagcttagagagagaacttggatagcaaaggagggaaccaatgggt 27450053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 43599303 - 43598963
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtgg-ccgtaagctaagtttgcaggacgccaaatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| || |||| ||||| ||||||||||||||||||     
T  43599303 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagcta-gtttgcaggacgccaaatc 43599205  T
Q  100 gtg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgaca 178  Q
    |||                     |||||||||||||||||| | |||||||||| |||||||||||||||| |||| ||| | |  ||| |||||||||    
T  43599204 gtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaatcgtgaca 43599105  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgctttttt-gaaggagggcttaagagagcttgtatg 277  Q
    |||| | ||||||||||||||||||| |||||| ||||| ||||  ||||||||||||||||||| ||||||    ||||  |||||||||||||| |||    
T  43599104 cgat-ttgggaaatcgtgacacgattgcttcagaggaaggctag--tatatattgtgttcttgtgtttttttactgggagaacttaagagagcttgaatg 43599008  T
Q  278 agctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  43599007 agcttagagagagaacttggatagcaaaggagggaaccaatgggt 43598963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 43604795 - 43604455
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtgg-ccgtaagctaagtttgcaggacgccaaatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| || |||| ||||| ||||||||||||||||||     
T  43604795 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagcta-gtttgcaggacgccaaatc 43604697  T
Q  100 gtg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgaca 178  Q
    |||                     |||||||||||||||||| | |||||||||| |||||||||||||||| |||| ||| | |  ||| |||||||||    
T  43604696 gtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaatcgtgaca 43604597  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgctttttt-gaaggagggcttaagagagcttgtatg 277  Q
    |||| | ||||||||||||||||||| |||||| ||||| ||||  ||||||||||||||||||| ||||||    ||||  |||||||||||||| |||    
T  43604596 cgat-ttgggaaatcgtgacacgattgcttcagaggaaggctag--tatatattgtgttcttgtgtttttttactgggagaacttaagagagcttgaatg 43604500  T
Q  278 agctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  43604499 agcttagagagagaacttggatagcaaaggagggaaccaatgggt 43604455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 43610287 - 43609947
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtgg-ccgtaagctaagtttgcaggacgccaaatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| || |||| ||||| ||||||||||||||||||     
T  43610287 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagcta-gtttgcaggacgccaaatc 43610189  T
Q  100 gtg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgaca 178  Q
    |||                     |||||||||||||||||| | |||||||||| |||||||||||||||| |||| ||| | |  ||| |||||||||    
T  43610188 gtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaatcgtgaca 43610089  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgctttttt-gaaggagggcttaagagagcttgtatg 277  Q
    |||| | ||||||||||||||||||| |||||| ||||| ||||  ||||||||||||||||||| ||||||    ||||  |||||||||||||| |||    
T  43610088 cgat-ttgggaaatcgtgacacgattgcttcagaggaaggctag--tatatattgtgttcttgtgtttttttactgggagaacttaagagagcttgaatg 43609992  T
Q  278 agctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  43609991 agcttagagagagaacttggatagcaaaggagggaaccaatgggt 43609947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 27445551 - 27445209
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgcc------ 94  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| |||||||||||||||          
T  27445551 caaatttgtggtctagaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagct-agtttgcaggacgccaaatcg 27445453  T
Q  95 ---------------aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
                   |||| ||||||||||||||||||||| | |||||||||| |||||||||||||||| |||| ||| | |  ||| ||||||||||    
T  27445452 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaatcgtgacac 27445353  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgctttttt----gaaggagggcttaagagagcttgta 275  Q
    ||| | ||||||||||| ||||||| |||||| ||||| ||||  ||||||||||||||||||||||||||     ||  |   |||||||||||||| |    
T  27445352 gat-ttgggaaatcgtggcacgattgcttcagaggaaggctag--tatatattgtgttcttgtgcttttttacaaaaaaaaaaacttaagagagcttgaa 27445256  T
Q  276 tgagctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  27445255 tgagcttagagagagaacttggatagcaaaggagggaaccaatgggt 27445209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 95 - 254
Target Start/End: Original strand, 28807205 - 28807362
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  28807205 aaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaactcg 28807304  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    || |||||||||||||||| | ||||||  |||||||| |||||||||||||||||||||    
T  28807305 tggcacgatttcttcagggcaggactag--tatatattatgttcttgtgcttttttgaag 28807362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 95 - 251
Target Start/End: Complemental strand, 33768642 - 33768488
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33768642 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 33768543  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttg 251  Q
    || |||||||||||||||| | ||||||||| || |  |||||||||||||||||||    
T  33768542 tggcacgatttcttcagggcatgactagtatttaaa--gtgttcttgtgcttttttg 33768488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 95 - 251
Target Start/End: Complemental strand, 33791774 - 33791620
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33791774 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 33791675  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttg 251  Q
    || |||||||||||||||| | ||||||||| || |  |||||||||||||||||||    
T  33791674 tggcacgatttcttcagggcaggactagtatttaaa--gtgttcttgtgcttttttg 33791620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 95 - 254
Target Start/End: Original strand, 37561076 - 37561233
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| |||||||||| |||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  37561076 aaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggttaacctggggaccgttgcagatcgtgacatgatctagggaaatcg 37561175  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    || |||||||||||||||| | ||||||  ||||||||||||||||||||||||||||||    
T  37561176 tggcacgatttcttcagggcaggactag--tatatattgtgttcttgtgcttttttgaag 37561233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 1456653 - 1457008
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| |||| ||||||||||||| |    
T  1456653 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagcta-gtttacaggacgccaaatcg 1456751  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     |||||||||||||||||| | |||||||||| |||||||||||| ||| |||| ||| | | |||| ||||||||||    
T  1456752 tggcacgatcttgggaaatcgtgacacgattcagaaacttgcttgttaagtatccctgataaggacttgtctaccttgggtcagatgcaaatcgtgacac 1456851  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgc-ttttttgaaggagggctt---------------a 263  Q
    | ||| ||||||||||| ||||||||||| || ||||||||||  |||||||||||||||||||| ||||||||||||| | ||               |    
T  1456852 ggtcttgggaaatcgtggcacgatttctttagaggaagactag--tatatattgtgttcttgtgctttttttgaaggagagtttttggaggaactcaaaa 1456949  T
Q  264 agagagcttgtatgagctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    | |||||||| | |||||| |||||||||||||||||||||||||||||||||||||||    
T  1456950 aaagagcttggaagagcttagagagagaacttggatagcaaaggagggaaccaatgggt 1457008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 95 - 251
Target Start/End: Complemental strand, 2785833 - 2785679
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2785833 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggagcgttgcagatcgtgacacgatctagggaaatcg 2785734  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttg 251  Q
    || |||||||||||||||| | ||||||||| || |  |||||||||||||||||||    
T  2785733 tggcacgatttcttcagggcaggactagtatttaaa--gtgttcttgtgcttttttg 2785679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 95 - 322
Target Start/End: Complemental strand, 43592743 - 43592518
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| | |||||||||| |||||||||||||||| |||| ||| | |  ||| ||||||||||||| | |||||||||    
T  43592743 aaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaatcgtgacacgat-ttgggaaatcg 43592645  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgctttttt-gaaggagggcttaagagagcttgtatgagctttgagagagaac 293  Q
    |||||||||| |||| | ||||| ||||  ||||||||||||||||||||||||||    ||||  |||||||||||||| |||||||| ||||||||||    
T  43592644 tgacacgattgcttcggaggaaggctag--tatatattgtgttcttgtgcttttttactgggagaacttaagagagcttgaatgagcttagagagagaac 43592547  T
Q  294 ttggatagcaaaggagggaaccaatgggt 322  Q
    |||||||||||||||||||||||||||||    
T  43592546 ttggatagcaaaggagggaaccaatgggt 43592518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 95 - 254
Target Start/End: Original strand, 31396619 - 31396776
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31396619 aaatcgtgacacgattcagacacttgttggttaagtttctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggtaatcg 31396718  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    ||||||||||||||||||| | |||| |||| || |  ||||||||||||||||||||||    
T  31396719 tgacacgatttcttcagggcaggacttgtatttaaa--gtgttcttgtgcttttttgaag 31396776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 95 - 254
Target Start/End: Original strand, 37556254 - 37556411
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||||||||||||||  ||||||||| |||||||||||| ||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||     
T  37556254 aaattgtgacacgatctagaaacttgctggttaagtatctctgataaggactggttaaccagaggaccgttgcagatcgtgacacgatctagggaaatca 37556353  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    || |||||||||||||||| | ||||||  ||||||||||||||||||||||||||||||    
T  37556354 tggcacgatttcttcagggcaggactag--tatatattgtgttcttgtgcttttttgaag 37556411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 95 - 254
Target Start/End: Original strand, 31401476 - 31401633
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| |||||| |||||||||||||| || |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31401476 aaatcgtgacatgattcagaaacttgctgcttaagtttctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggtaatcg 31401575  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    ||||||||||||||||||| | |||| |||| || |  ||||||||||||||||||||||    
T  31401576 tgacacgatttcttcagggcaggacttgtatttaaa--gtgttcttgtgcttttttgaag 31401633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 95 - 322
Target Start/End: Complemental strand, 31180720 - 31180506
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||| ||||  | |||||||||||||||||||||||||||||||| ||| | |  ||| ||||||||| ||||| |||||||||    
T  31180720 aaatcgtgacacgattcagagactttctcgttaagtatcactgataaggactggtcaaccttgggtcagacgcaaatcgtgacatgatcttgggaaatcg 31180621  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatgagctttgagagagaact 294  Q
    || ||||||| |||||| |||||||||||||  ||||||||||||||||| |||||||||  ||          ||||| | |||||| |||||||||||    
T  31180620 tggcacgattgcttcagaggaagactagtat--atattgtgttcttgtgc-tttttgaagcggg----------gcttggaagagcttagagagagaact 31180534  T
Q  295 tggatagcaaaggagggaaccaatgggt 322  Q
    |||||| |||||||||||||||| ||||    
T  31180533 tggataacaaaggagggaaccaaagggt 31180506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 29402565 - 29402672
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| | |||| ||||||||||||||||||| |    
T  29402565 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtggccatgagct-agtttgcaggacgccaaatcg 29402663  T
Q  101 tgacacgat 109  Q
    || ||||||    
T  29402664 tggcacgat 29402672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30631933 - 30631825
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||| |||  ||||||||||||||||||| |    
T  30631933 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagc-cagtttgcaggacgccaaatcg 30631835  T
Q  101 tgacacgatt 110  Q
    ||||||||||    
T  30631834 tgacacgatt 30631825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 29751708 - 29751455
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||| |||||||||||| || |||| ||||  |||||||||||  |  ||||| |||| || |||||||  ||||||| |    
T  29751708 caaatttgtggtctggaagaacagggaaatcgtgacatgaatttggcatcacgacacgatttcgtggtgccgtgagct-aggttgcagggtgccaaatcg 29751610  T
Q  101 tgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgacacgatctagggaaatcgtgaca 199  Q
    ||||||||||  |||||||| | ||||||||||  |||||||||||||||| |||| |||      ||| ||||||||||||| | || |||||||||||    
T  29751609 tgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgat-ttggaaaatcgtgaca 29751511  T
Q  200 cgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggag 257  Q
    ||||| ||| || ||||| |||||||||| |  |||||||||||| | ||||||||||    
T  29751510 cgattgctttagaggaaggctagtatataaa--gtgttcttgtgcatctttgaaggag 29751455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16407657 - 16407718
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16407657 caaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattt 16407718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18442217 - 18442109
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||| |  ||||| ||||  |||||||||  ||||||| |    
T  18442217 caaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagct-ggtttgcagggtgccaaatcg 18442119  T
Q  101 tgacacgatt 110  Q
    ||||||||||    
T  18442118 tgacacgatt 18442109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9789793 - 9789685
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||  |  ||||| ||||  |||||||||  ||||||| |    
T  9789793 caaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcg 9789695  T
Q  101 tgacacgatt 110  Q
    ||||||||||    
T  9789694 tgacacgatt 9789685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 29719981 - 29720089
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||  |  ||||| |||| ||| ||||||  ||||||| |    
T  29719981 caaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagct-agtctgcagggtgccaaatcg 29720079  T
Q  101 tgacacgatt 110  Q
    ||||||||||    
T  29720080 tgacacgatt 29720089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 24136468 - 24136361
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||| |||||  |  ||||| |||| ||||||||||  ||||||| |    
T  24136468 caaatttgtggtctggaagaacacagaaatcgtgacacgaatttggcatcgtgacacaatttcgtgatgccgtgagct-agtttgcagggtgccaaatcg 24136370  T
Q  101 tgacacgat 109  Q
    |||||||||    
T  24136369 tgacacgat 24136361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 26177482 - 26177589
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||  |  ||||| ||||  |||||||||  ||||||| |    
T  26177482 caaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcg 26177580  T
Q  101 tgacacgat 109  Q
    |||||||||    
T  26177581 tgacacgat 26177589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 22536837 - 22536775
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||    
T  22536837 caaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttc 22536775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 29722168 - 29722230
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  29722168 caaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttc 29722230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29752374 - 29752312
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  29752374 caaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttc 29752312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 15465109 - 15464981
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||  |||||||||||||||   |  ||||| ||||  |||||||||  ||||||| |    
T  15465109 caaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcg 15465011  T
Q  101 tgacacgattcagaaacttgttggttaagt 130  Q
    ||||||||||   ||||||| |||||||||    
T  15465010 tgacacgattttcaaacttgctggttaagt 15464981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16409093 - 16409154
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||    
T  16409093 caaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 16409154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10592859 - 10592919
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  10592859 caaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 10592919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 35388183 - 35388038
Alignment:
Q  81 gtttgcaggacgccaaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggac---cgttgcagatcgtga 176  Q
    |||||||||  |||||||||||||||||||   ||||||| | ||||||||||  |||||||||||||||| |||| |||||   |||| || |||||||    
T  35388183 gtttgcagggtgccaaattgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgtt-caaatcgtga 35388085  T
Q  177 cacgatctagggaaatcgtgacacgatttcttcaggggaagactagtat 225  Q
    ||||||||  |||||||||||||||||||  |||| ||||| |||||||    
T  35388084 cacgatct--ggaaatcgtgacacgattttatcagaggaaggctagtat 35388038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15045264 - 15045203
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||||| || ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  15045264 caaatttgtagtttggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt 15045203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36931859 - 36931920
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||| ||||||||||||||||||||||||||| |||| ||||||| ||||||||    
T  36931859 caaatttgtggtttggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattt 36931920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25077721 - 25077781
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  |||||||| |||||    
T  25077721 caaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgatt 25077781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25135690 - 25135750
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  |||||||| |||||    
T  25135690 caaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgatt 25135750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40379693 - 40379753
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||  ||||||||||||||    
T  40379693 caaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgatt 40379753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37556140 - 37556199
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||||||||||||||||||||||| |||||||||||||||| |  |||||||||||||    
T  37556140 caaatttgtggtctggaagaacagagtaatcgtgacacgatttggtaatcgtgacacgat 37556199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31180815 - 31180773
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31180815 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 31180773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43592839 - 43592797
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  43592839 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43592797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9352823 - 9352884
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||| || |||||||||||||||||||| ||||| || ||||||||||||||||    
T  9352823 caaatttgtggtttgaaagaacagagaaatcgtgacgcgattgtggcatcgtgacacgattt 9352884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16544009 - 16544069
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||  ||||||||||||||    
T  16544009 caaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgatt 16544069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16546231 - 16546291
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||  ||||||||||||||    
T  16546231 caaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgatt 16546291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 30631814 - 30631762
Alignment:
Q  100 gtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaa 152  Q
    ||||||||||||||||||||| | |||||||||| ||||||||||||||||||    
T  30631814 gtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcaa 30631762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40381904 - 40381964
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||  ||||||||||||||    
T  40381904 caaatttgtggtctgaaagaacagggaaatcgtgccacgattttggaatcgtgacacgatt 40381964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28807091 - 28807150
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    ||||||| |||||||||||||||||| ||||||| ||||||||||  |||||||||||||    
T  28807091 caaatttatggtctggaagaacagaggaatcgtgtcacgattttgcaatcgtgacacgat 28807150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37560962 - 37561021
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||||||||||||||||||||||| ||||||||||||||||    |||||||||||||    
T  37560962 caaatttgtggtctggaagaacagagtaatcgtgacacgatttgataatcgtgacacgat 37561021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14520838 - 14520796
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  14520838 caaatttgtggtttggaagaacagagaaatcgtgacacgattt 14520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26170373 - 26170434
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||| |||| ||||||||||| ||||||||||||||| ||||  |||||||||||||||    
T  26170373 caaatttatggtatggaagaacagggaaatcgtgacacgaatttggtatcgtgacacgattt 26170434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 29402684 - 29402728
Alignment:
Q  100 gtgacacgattcagaaacttgttggttaagtatcactgataagga 144  Q
    ||||||||||||||||||||| | |||||||||||||||||||||    
T  29402684 gtgacacgattcagaaacttgctcgttaagtatcactgataagga 29402728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 10593044 - 10593102
Alignment:
Q  166 gcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaagactagtat 225  Q
    ||||||||||||||||| | |||||||||||||||||||||  ||| |||||||||||||    
T  10593044 gcagatcgtgacacgattt-gggaaatcgtgacacgatttcaacagaggaagactagtat 10593102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 251
Target Start/End: Complemental strand, 24136354 - 24136201
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgacacgatctagggaaatc 193  Q
    |||| |||||||||||   ||||||| | ||||||||||  |||||||||||||||| |||| |||||    ||| |||||||||||||||  |||||||    
T  24136354 aaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgcaaatcgtgacacgatct--ggaaatc 24136257  T
Q  194 gtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttg 251  Q
    ||| |||||||   |||| ||||  |||||||||| |  |||||||||||| ||||||    
T  24136256 gtggcacgattgtatcagaggaaagctagtatataaa--gtgttcttgtgcatttttg 24136201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 204
Target Start/End: Original strand, 25077835 - 25077944
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtgacacgatctagggaaatc 193  Q
    |||| |||||||||| |||||||||| | ||||||||||  |||||||||||||||   ||| ||||| |  ||| ||||||||||||| | || |||||    
T  25077835 aaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgat-tgggaaaatc 25077933  T
Q  194 gtgacacgatt 204  Q
    |||||||||||    
T  25077934 gtgacacgatt 25077944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 204
Target Start/End: Original strand, 25135804 - 25135913
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtgacacgatctagggaaatc 193  Q
    |||| |||||||||| |||||||||| | ||||||||||  |||||||||||||||   ||| ||||| |  ||| ||||||||||||| | || |||||    
T  25135804 aaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgat-tgggaaaatc 25135902  T
Q  194 gtgacacgatt 204  Q
    |||||||||||    
T  25135903 gtgacacgatt 25135913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 35388230 - 35388196
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtga 35  Q
    |||||||||||||||||||||||||||||||||||    
T  35388230 caaatttgtggtctggaagaacagagaaatcgtga 35388196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 12083667 - 12083708
Alignment:
Q  2 aaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||| |||| ||||||||||||||||||||||||||||||    
T  12083667 aaatttatggtttggaagaacagagaaatcgtgacacgattt 12083708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2785947 - 2785888
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||||||||| ||||||||||||| ||||||| | |||||| |  |||||||||||||    
T  2785947 caaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 2785888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 205
Target Start/End: Complemental strand, 24136373 - 24136338
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgattt 205  Q
    ||||||||||||||| ||||||||||||||||||||    
T  24136373 atcgtgacacgatcttgggaaatcgtgacacgattt 24136338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 287 - 322
Target Start/End: Complemental strand, 30631734 - 30631699
Alignment:
Q  287 agagaacttggatagcaaaggagggaaccaatgggt 322  Q
    |||||||||||||| |||||||||||||||||||||    
T  30631734 agagaacttggataacaaaggagggaaccaatgggt 30631699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31396505 - 31396564
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||||||||| ||| ||||||||| ||||||| |||||||| |  |||||||||||||    
T  31396505 caaatttgtggtttgggagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 31396564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 33768756 - 33768697
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||||||||| ||||||||||||| ||||||| | |||||| |  |||||||||||||    
T  33768756 caaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 33768697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 33791888 - 33791829
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||||||||| ||||||||||||| ||||||| | |||||| |  |||||||||||||    
T  33791888 caaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 33791829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 11916460 - 11916502
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| || |||||||||||||||||||||| ||||    
T  11916460 caaatttgtggtttgaaagaacagagaaatcgtgacacaattt 11916502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 25412396 - 25412436
Alignment:
Q  22 cagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||||||||||||| |  |||||||||||||||    
T  25412396 cagagaaatcgtgacacgatttggcaatcgtgacacgattt 25412436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 43625633 - 43625605
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaa 29  Q
    |||||||||||||||||||||||||||||    
T  43625633 caaatttgtggtctggaagaacagagaaa 43625605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 34569 - 34908
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| || |  ||||||| |||||||||| |    
T  34569 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacactatttcaagtggccgttagttt-gtttgcatgacgccaaatcg 34667  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     |||||||||||||||||| | ||||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||    
T  34668 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcagatcgtgacac 34767  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatgag 279  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||  |||||||||||||||| |||||||||||||     ||||||||||||||||||||    
T  34768 gatctagggaaatcgtggcactatttcttcagaggaagactag--tatatattgtgttcttttgcttttttgaagtgaatcttaagagagcttgtatgag 34865  T
Q  280 ctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    ||| |||||||||||||||||||||||||||||||||||||||    
T  34866 cttagagagagaacttggatagcaaaggagggaaccaatgggt 34908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 6e-74; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 95 - 254
Target Start/End: Original strand, 39784454 - 39784611
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39784454 aaatcgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 39784553  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    || |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  39784554 tggcacgatttcttcaggggaagactag--tatatattgtgttcttgtgcttttttgaag 39784611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 25327679 - 25327965
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaatt- 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||| || ||||| ||||||||||||||||||      
T  25327679 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcttcgtggcacgatttcaagtggctgtgagcta-gtttgcaggacgccaaatca 25327777  T
Q  100 --------------------gtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
                        ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||| ||| ||||||||| |||||||||    
T  25327778 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgggtccgttgcagctcgtgacac 25327877  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagag 269  Q
    ||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||  ||||||||||    
T  25327878 gatctagggaaatcgtggcacgatttcttcaggggaagactag--tatatattgtgttcttgtgcttttttgaagaagaacttaagagag 25327965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 7289442 - 7289772
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtg-gccgtaagctaagtttgcaggacgccaaatt 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| | ||| | ||||| ||||||||||||||||||     
T  7289442 caaatttgtggtctggaagaacagagaaatagtgacacgattttggcatcgtgacacgatttcaagggagccatgagcta-gtttgcaggacgccaaatc 7289540  T
Q  100 gtga---------------------cacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgaca 178  Q
    ||||                     ||||||||||||||||| | |||||||||| |||||||||||| ||| |||| ||  | | |||| |||||||||    
T  7289541 gtgacacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtctaccttggatcagatgcaaatcgtgaca 7289640  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatga 278  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||||||||||||||          ||||||||||| | ||    
T  7289641 cgatcttgggaaatcgtggcacgatttcttcagaggaagactag--tatatattgtgttcttgtgcttttttga----------aagagagcttggaaga 7289728  T
Q  279 gctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  7289729 gcttagagagagaacttggatagcaaaggagggaaccaatgggt 7289772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 10683754 - 10684026
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| ||||| |||||||||||||||||| |    
T  10683754 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcta-gtttgcaggacgccaaatcg 10683852  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     |||||||||||||||||| | |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  10683853 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcaacttggggaccgttgcagatcgtgacac 10683952  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaagg 255  Q
    ||||||||||||||||| ||||||||| |||||  | ||||||||| || |  ||||||||||||| |||||||||    
T  10683953 gatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaa--gtgttcttgtgctcttttgaagg 10684026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 6311920 - 6311591
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  ||||| ||||| |||||||||||||||||| |    
T  6311920 caaatttgtggtctggaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcta-gtttgcaggacgccaaatcg 6311822  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     |||||||||||||||||| | ||||||||||||| ||||||||| |||||||| ||| | | |||| ||||||||||    
T  6311821 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtcaaccttgggtcagatgcaaatcgtgacac 6311722  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatgag 279  Q
    |||   ||||||||||| ||| |||||||||| |||||||||||||  |||||||||||||||||||||||||           |||||||||| | |||    
T  6311721 gattgtgggaaatcgtggcacaatttcttcagaggaagactagtat--atattgtgttcttgtgcttttttga----------gagagagcttggaagag 6311634  T
Q  280 ctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    ||| |||| ||||||||||||||||||||||||||||| ||||    
T  6311633 cttagagatagaacttggatagcaaaggagggaaccaaagggt 6311591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 95 - 251
Target Start/End: Complemental strand, 35745849 - 35745695
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35745849 aaatcgtgacacgattcagaaacttgctggttaagtatctatgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 35745750  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttg 251  Q
    || |||||||||||||||| | ||||||||| || |  |||||||||||||||||||    
T  35745749 tggcacgatttcttcagggcaggactagtatttaaa--gtgttcttgtgcttttttg 35745695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 18852642 - 18852971
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||  ||||| ||||| |||||||||||||||||| |    
T  18852642 caaatttgtggtctggaagaacagagaaatcgtgatacgattttggcatcgtgacacgatttcaaggtgccgtgagcta-gtttgcaggacgccaaatcg 18852740  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgaca 178  Q
    ||                     |||||||||||||||||| | |||||||||||||||||||||||||||| |||| ||| | |  |||||||||||||    
T  18852741 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcagacgcagatcgtgaca 18852840  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatga 278  Q
    |||| |  |||||||||| ||||||| |||||| ||||||||||  ||||||||||||||||||||||||||||||          ||||||||| | ||    
T  18852841 cgattt--ggaaatcgtggcacgattgcttcagaggaagactag--tatatattgtgttcttgtgcttttttgaag----------gagagcttggaaga 18852926  T
Q  279 gctttgagagag-aacttggatagcaaaggagggaaccaatgggt 322  Q
    |||| ||||||| |||||||||| |||||||||||||||| ||||    
T  18852927 gcttagagagagaaacttggataacaaaggagggaaccaaagggt 18852971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 30656267 - 30655939
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgcc------ 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||| |||||||||||||||          
T  30656267 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagct-agtttgcaggacgccaaatcg 30656169  T
Q  95 ---------------aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtgaca 178  Q
                   |||| ||||||||||||||||||||| | ||||||||||  ||||||||||||||| ||||| ||| | |  ||| |||||||||    
T  30656168 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtgaca 30656069  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatga 278  Q
    ||||||  |||||||||| ||||||| |||||| ||||||||||  ||||||||||||||||||| ||||||||||          ||||||||| | ||    
T  30656068 cgatct--ggaaatcgtggcacgattgcttcagaggaagactag--tatatattgtgttcttgtgtttttttgaag----------gagagcttggaaga 30655983  T
Q  279 gctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
    ||||  |||||||||||||||| |||||||||||||||| ||||    
T  30655982 gcttaaagagagaacttggataacaaaggagggaaccaaagggt 30655939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 4759549 - 4759827
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| ||||| |||||||||||||||||| |    
T  4759549 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacgccaaatcg 4759647  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgaca 178  Q
    ||                     |||||||| ||||||||| | ||||||||||  |||||||||||||||| |||| || || |  ||| |||||||||    
T  4759648 tggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggacgcaaatcgtgaca 4759747  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggctt 262  Q
    ||||||  ||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||| |||||||||| ||||    
T  4759748 cgatct--ggaaatcgtgacacgatttcttcagaggaagactag--tatatattgtgttcttgtgcttgtttgaaggagagctt 4759827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 18870036 - 18870314
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  | ||| ||||| |||||||||||||||||| |    
T  18870036 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagatgtcgtgagcta-gtttgcaggacgccaaatcg 18870134  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgaca 178  Q
    ||                     |||||||||||||||||| | ||||||||||||| |||||||||||||| |||| ||| | |  |||||||||||||    
T  18870135 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggactggtcataccttgggtcagacgcagatcgtgaca 18870234  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggctt 262  Q
    |||| |  | |||||||| ||||||| |||||| | ||||||||  ||||||||||||||||||||||||||||||||| ||||    
T  18870235 cgattt--gaaaatcgtggcacgattgcttcagagaaagactag--tatatattgtgttcttgtgcttttttgaaggagagctt 18870314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 95 - 262
Target Start/End: Original strand, 10688728 - 10688893
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| | ||||||||||||| ||||||||| |||||||| ||| | | |||| |||||||||||||   |||||||||    
T  10688728 aaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtcaaccttgggtcagatgcaaatcgtgacacgattgtgggaaatcg 10688827  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggctt 262  Q
    || ||| |||||||||| ||||||||||  ||||||||||||||||||||  ||||||| ||| ||||    
T  10688828 tggcacaatttcttcagaggaagactag--tatatattgtgttcttgtgcagttttgaaagagagctt 10688893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 33037302 - 33037409
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||| |||| ||||||||||||||||||| |    
T  33037302 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagct-agtttgcaggacgccaaatcg 33037400  T
Q  101 tgacacgat 109  Q
    |||||||||    
T  33037401 tgacacgat 33037409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 36979999 - 36979892
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||| |||| ||||||||||||||||||| |    
T  36979999 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagct-agtttgcaggacgccaaatcg 36979901  T
Q  101 tgacacgat 109  Q
    || ||||||    
T  36979900 tggcacgat 36979892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 31042924 - 31043052
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||  |  ||||| ||||  |||||||||  ||||||| |    
T  31042924 caaatttgtggtctggaagaatagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagct-ggtttgcagggtgccaaatcg 31043022  T
Q  101 tgacacgattcagaaacttgttggttaagt 130  Q
    |||||||||||  ||||||| | |||||||    
T  31043023 tgacacgattctcaaacttgctcgttaagt 31043052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7412936 - 7412876
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  7412936 caaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 7412876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39784340 - 39784400
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  39784340 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 39784400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 95 - 262
Target Start/End: Original strand, 1261544 - 1261710
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggac---cgttgcagatcgtgacacgatctagggaa 190  Q
    |||| |||||||||||   ||||||| | ||||||||||  |||||||||||||||| |||| |||||   |||| || |||||||||||||||  ||||    
T  1261544 aaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacatacgtt-caaatcgtgacacgatct--ggaa 1261640  T
Q  191 atcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggctt 262  Q
    |||||||||||||||  |||| ||||| ||||||| || |  ||||||||||||||||||||||||| ||||    
T  1261641 atcgtgacacgattttatcagaggaaggctagtatttaaa--gtgttcttgtgcttttttgaaggagagctt 1261710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 2627334 - 2627396
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  2627334 caaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttc 2627396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3439103 - 3439165
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  3439103 caaatttgtggtttggaagaacagagaaatcgtgacacgattgtggcatcgtgacacgatttc 3439165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26288501 - 26288440
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  26288501 caaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattt 26288440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26301758 - 26301697
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  26301758 caaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattt 26301697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26313752 - 26313691
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  26313752 caaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattt 26313691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 1261430 - 1261537
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||| |||||||||| |||||||| ||||||| |||| |||||||||||||||||  |  ||||| |||| ||||||||||  ||||||| |    
T  1261430 caaatttgtggtttggaagaacacagaaatcgcgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-agtttgcagggtgccaaatcg 1261528  T
Q  101 tgacacgat 109  Q
    |||||||||    
T  1261529 tgacacgat 1261537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 225
Target Start/End: Complemental strand, 36979880 - 36979756
Alignment:
Q  100 gtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgacacgatctagggaaatcgtgac 198  Q
    ||||||||||||||||||||| | |||||||||| ||||||||||||||||| |||| |||      ||| |||||||||||||||  |||||||||| |    
T  36979880 gtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcataccttgggttgtacgcaaatcgtgacacgatct--ggaaatcgtggc 36979783  T
Q  199 acgatttcttcaggggaagactagtat 225  Q
    |||||| |||||| ||||| |||||||    
T  36979782 acgattgcttcagaggaaggctagtat 36979756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10688633 - 10688675
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10688633 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 10688675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25689576 - 25689618
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25689576 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 25689618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 262
Target Start/End: Original strand, 33037490 - 33037561
Alignment:
Q  189 aaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggctt 262  Q
    |||||||||||||||| ||||||  | |||||||||||  ||||||||||||||||||||||||||||| ||||    
T  33037490 aaatcgtgacacgattgcttcagaaggagactagtata--tattgtgttcttgtgcttttttgaaggagagctt 33037561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 42575894 - 42575832
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||  |||| |||||||||||    
T  42575894 caaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttc 42575832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 33037421 - 33037472
Alignment:
Q  100 gtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca 151  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  33037421 gtgacacgattcagaaacttgctcattaagtatcactgataaggactggtca 33037472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5701967 - 5702009
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  5701967 caaatttgtggtttggaagaacagagaaatcgtgacacgattt 5702009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 15290158 - 15290220
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||  || | |||||||||||    
T  15290158 caaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttc 15290220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 15470527 - 15470589
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||  || | |||||||||||    
T  15470527 caaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttc 15470589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4456617 - 4456575
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  4456617 caaatttgtggtttggaagaacaaagaaatcgtgacacgattt 4456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 1261525 - 1261560
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgattt 205  Q
    ||||||||||||||| ||||||||||||||||||||    
T  1261525 atcgtgacacgatcttgggaaatcgtgacacgattt 1261560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 35745963 - 35745904
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||||||||| ||||||||||||| ||||||| | |||||| |  |||||||||||||    
T  35745963 caaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 35745904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23799107 - 23799149
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| || ||||||||||||||||| |||||||||    
T  23799107 caaatttgtggtttgaaagaacagagaaatcgtaacacgattt 23799149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 204
Target Start/End: Original strand, 33037397 - 33037431
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgatt 204  Q
    ||||||||||||||| |||||||||||||||||||    
T  33037397 atcgtgacacgatcttgggaaatcgtgacacgatt 33037431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 141; Significance: 6e-74; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 41391170 - 41390825
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgcca----- 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||  ||  ||||| |||  ||||||||||||||||         
T  41391170 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagc-cagtttgcaggacgccaaatcg 41391073  T
Q  96 ----------------aattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
                    ||| |||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  41391072 tggcacgatcttgggaaatcgtgacatgattcagaaacttgctcattaagtatcactgataaggactggtcaacctggggtccgctgcagatcgtgacac 41390973  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggaggg-----------cttaagaga 268  Q
    ||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| || |           |||||||||    
T  41390972 gatctagggaaatcgtggcacgatttcttcaggggaagactag--tatatattgtgttcttgtgcttttttgaagtagagttgagaaagaacttaagaga 41390875  T
Q  269 gcttgtatgagc-tttgagagagaacttggatagcaaaggagggaaccaa 317  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41390874 gcttgtatgagcttttgagagagaacttggatagcaaaggagggaaccaa 41390825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 95 - 317
Target Start/End: Complemental strand, 41398712 - 41398480
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |  |||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  41398712 aaatcgtgacacgattcagaaacttgctcattaagtatcattgataaggactggtcaacctggggtccgctgcagatcgtgacacgatctagggaaatcg 41398613  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggaggg-----------cttaagagagcttgtatgagc-tt 282  Q
    || ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| || |           ||||||||||||||||||||| ||    
T  41398612 tggcacgatttcttcaggggaagactagtat--atattgtgttcttgtgcttttttgaagtagagttgagaaagaacttaagagagcttgtatgagcttt 41398515  T
Q  283 tgagagagaacttggatagcaaaggagggaaccaa 317  Q
    |||||||||||||||||||||||||||||||||||    
T  41398514 tgagagagaacttggatagcaaaggagggaaccaa 41398480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 1054529 - 1054800
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||  | ||| |||| ||| |||||||||||||||||||| |    
T  1054529 caaatttgtggtctggaagaacagagaaatcgtgtcacgattttggaatcgtgatacgattggaggtg-ccgtgagccaagtttgcaggacgccaaatcg 1054627  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1054628 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtcaacctgggaaccgttgcagatcgtgacac 1054727  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    |||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  1054728 gatctagggaaatcgtgacacgatttcttcaggggaggactag--tatatattgtgttcttgtgcttttttgaag 1054800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 39446067 - 39445796
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |  || |||| ||| |||||||||||||||||||| |    
T  39446067 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatg-ccgtgagccaagtttgcaggacgccaaatcg 39445969  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     ||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39445968 tggcacgatcttgggaaatcatgacacgatccagaaacttgctcgttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 39445869  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    ||||||||||||||||| |||||||||||||||| | |||||||||  |||||||||||||||||||||||||||    
T  39445868 gatctagggaaatcgtggcacgatttcttcagggcaggactagtat--atattgtgttcttgtgcttttttgaag 39445796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 95 - 249
Target Start/End: Original strand, 44023506 - 44023658
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44023506 aaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 44023605  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttt 249  Q
    || |||||||||||||||||| |||| |  |||||||||||||||||||||||||    
T  44023606 tggcacgatttcttcaggggaggactgg--tatatattgtgttcttgtgcttttt 44023658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 95 - 249
Target Start/End: Original strand, 25444721 - 25444873
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25444721 aaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtcaacctagggaccgttgcagatcgtgacacgatctagggaaatcg 25444820  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttt 249  Q
    || |||||||||||||||||| ||||||  ||| |||||||||||||||||||||    
T  25444821 tggcacgatttcttcaggggaggactag--tatttattgtgttcttgtgcttttt 25444873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 95 - 249
Target Start/End: Original strand, 25439528 - 25439680
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| |||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25439528 aaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtcaacctggggactgttgcagatcgtgacacgatctagggaaatcg 25439627  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttt 249  Q
    || |||||||||||||||||| ||||||  ||| |||||||||||||||||||||    
T  25439628 tggcacgatttcttcaggggaggactag--tatttattgtgttcttgtgcttttt 25439680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 95 - 225
Target Start/End: Original strand, 43988078 - 43988208
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  43988078 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgttgcatatcgtgacacgatctagggaaatcg 43988177  T
Q  195 tgacacgatttcttcaggggaagactagtat 225  Q
    || |||||||||||||||| | |||||||||    
T  43988178 tggcacgatttcttcagggcaggactagtat 43988208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 95 - 322
Target Start/End: Original strand, 24786954 - 24787168
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtgacacgatctagggaaatc 193  Q
    |||| ||||||||||||||||||||| | ||||||||||  ||||||||||||||| ||||| ||| | |  ||| |||||||||||||||  |||||||    
T  24786954 aaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtgacacgatct--ggaaatc 24787051  T
Q  194 gtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatgagctttgagagagaac 293  Q
    ||| ||||||| |||||| ||||||||||  ||||||||||||||||||||||||||||||          ||||||||| | |||||| ||||||||||    
T  24787052 gtggcacgattgcttcagaggaagactag--tatatattgtgttcttgtgcttttttgaag----------gagagcttggaagagcttagagagagaac 24787139  T
Q  294 ttggatagcaaaggagggaaccaatgggt 322  Q
    ||||||| |||||||||||||||| ||||    
T  24787140 ttggataacaaaggagggaaccaaagggt 24787168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 24202267 - 24202491
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||  |  ||||| ||||  |||||||||  ||||||| |    
T  24202267 caaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcg 24202365  T
Q  101 tgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggac---cgttgcagatcgtgacacgatctagggaaatcgtg 196  Q
    ||||||||||   ||||||| | ||||||||||  |||||||||||||||| | || |||||   |||| || |||||||||||||||  ||||||||||    
T  24202366 tgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcatatcttgggacgcacgtt-caaatcgtgacacgatct--ggaaatcgtg 24202462  T
Q  197 acacgatttcttcaggggaagactagtat 225  Q
    ||||||||   |||| ||||| |||||||    
T  24202463 acacgattgtatcagaggaaggctagtat 24202491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 95 - 243
Target Start/End: Original strand, 24793776 - 24793921
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtgacacgatctagggaaatc 193  Q
    |||| ||||||||||||||||||||| | ||||||||||  ||||||||||||||| ||||| ||| | |  ||| |||||||||||||||  |||||||    
T  24793776 aaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtgacacgatct--ggaaatc 24793873  T
Q  194 gtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtg 243  Q
    ||| ||||||| |||||| ||||||||||  |||||||||||||||||||    
T  24793874 gtggcacgattgcttcagaggaagactag--tatatattgtgttcttgtg 24793921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 51765007 - 51765113
Alignment:
Q  2 aaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattgt 101  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |  ||||| ||||  |||||||||  ||||||| ||    
T  51765007 aaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcgt 51765105  T
Q  102 gacacgat 109  Q
    ||||||||    
T  51765106 gacacgat 51765113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 20622805 - 20622697
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||  |  ||||| |||| ||| ||||||  ||||||| |    
T  20622805 caaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagct-agtctgcagggtgccaaatcg 20622707  T
Q  101 tgacacgatt 110  Q
    ||||||||||    
T  20622706 tgacacgatt 20622697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44023392 - 44023452
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  44023392 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 44023452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9036018 - 9036080
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  9036018 caaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc 9036080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9986801 - 9986863
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  9986801 caaatttgtggtctggaagaacagggaaatcgtgacacgaatttgacatcgtaacacgatttc 9986863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 21053555 - 21053617
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  21053555 caaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttc 21053617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19365784 - 19365845
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||    
T  19365784 caaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 19365845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44203233 - 44203293
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  44203233 caaatttgtggtctggaagaacagggaaatcgtgacacgattttggaatcgtgacacgatt 44203293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19360928 - 19360989
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||  |||||||||||||||    
T  19360928 caaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattt 19360989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25439414 - 25439475
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||||||||||||||||| |||||||||||||||| |  |||||||||||||||    
T  25439414 caaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgattt 25439475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25444607 - 25444668
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||||||||||||||||| |||||||||||||||| |  |||||||||||||||    
T  25444607 caaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgattt 25444668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40281974 - 40282035
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||||||||||||||||| || ||||||||||||||| |||| ||||||||||||||||    
T  40281974 caaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcatcgtgacacgattt 40282035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 24793681 - 24793723
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24793681 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 24793723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13604111 - 13604172
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||  |||||| ||||||||    
T  13604111 caaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattt 13604172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21536128 - 21536189
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||| ||||||||||||||||||||||||||||||   || |||||||||||||    
T  21536128 caaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgacacgattt 21536189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 26644390 - 26644450
Alignment:
Q  2 aaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||| |||||| |||||||||    
T  26644390 aaatttgtggtttggaagaacagaggaatcgtgatacgattttgtcatcgtaacacgattt 26644450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13599009 - 13598967
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  13599009 caaatttgtggtttggaagaacagagaaatcgtgacacgattt 13598967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37070376 - 37070334
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  37070376 caaatttgtggtttggaagaacagagaaatcgtgacacgattt 37070334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41398806 - 41398764
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  41398806 caaatttgtggtctgaaagaacagagaaatcgtgacacgattt 41398764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 204
Target Start/End: Original strand, 44203347 - 44203456
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtgacacgatctagggaaatc 193  Q
    |||| |||||||||| |||||||||| | ||||||||||  |||||||||||||||   ||| ||||| |  ||| ||||||||||||| | || |||||    
T  44203347 aaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgat-tgggaaaatc 44203445  T
Q  194 gtgacacgatt 204  Q
    |||||||||||    
T  44203446 gtgacacgatt 44203456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 16124197 - 16124238
Alignment:
Q  2 aaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    ||||||||||| |||||||||||||||||||||| |||||||    
T  16124197 aaatttgtggtttggaagaacagagaaatcgtgatacgattt 16124238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 9036204 - 9036263
Alignment:
Q  166 gcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaagactagtata 226  Q
    ||||||||||||||||| | || ||||||||||||||||||  ||| ||||||||||||||    
T  9036204 gcagatcgtgacacgat-tgggaaaatcgtgacacgatttcaacagaggaagactagtata 9036263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 19361023 - 19361058
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgattt 205  Q
    ||||||||||||||| ||||||||||||||||||||    
T  19361023 atcgtgacacgatcttgggaaatcgtgacacgattt 19361058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 19365879 - 19365914
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgattt 205  Q
    ||||||||||||||| ||||||||||||||||||||    
T  19365879 atcgtgacacgatcttgggaaatcgtgacacgattt 19365914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3282315 - 3282273
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    ||||||||||||  ||||||||||| |||||||||||||||||    
T  3282315 caaatttgtggttaggaagaacagaaaaatcgtgacacgattt 3282273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 255
Target Start/End: Complemental strand, 20622691 - 20622533
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgacacgatctagggaaatc 193  Q
    |||| |||||||||||  |||||||| | ||||||||||  |||||||||||||||| |||| |||      ||| |||||| || ||| | || |||||    
T  20622691 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggtggtacgcaaatcgtggcatgat-ttggaaaatc 20622593  T
Q  194 gtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaagg 255  Q
    ||||||| ||| |||||| ||||| |||||||||| |  |||||||||||| | ||||||||    
T  20622592 gtgacacaattgcttcagaggaaggctagtatataaa--gtgttcttgtgcatctttgaagg 20622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 29652418 - 29652381
Alignment:
Q  6 ttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  29652418 ttgtggtttggaagaacagagaaatcgtgatacgattt 29652381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 2e-64; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 18657014 - 18656742
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgt-aagctaagtttgcaggacgccaaatt 99  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||  |  ||||| |||| ||||||||||||||||||||     
T  18657014 caaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagc-aagtttgcaggacgccaaatc 18656916  T
Q  100 gtgacacgat---------------------tcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgaca 178  Q
    ||||||||||                     ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18656915 gtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgaca 18656816  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||| || |  ||||||||||||||||||||||    
T  18656815 cgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaa--gtgttcttgtgcttttttgaag 18656742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 95 - 254
Target Start/End: Original strand, 2672548 - 2672705
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2672548 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 2672647  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    || |||||||||||||||| | ||||||||| || |  ||||||||||||||||||||||    
T  2672648 tggcacgatttcttcagggcaggactagtatttaaa--gtgttcttgtgcttttttgaag 2672705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 95 - 254
Target Start/End: Original strand, 2676704 - 2676861
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2676704 aaatcgtgacacgattcagaaacttgctggttaagaatctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 2676803  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    || |||||||||||||||| | ||||||||| || |  ||||||||||||||||||||||    
T  2676804 tggcacgatttcttcagggcaggactagtatttaaa--gtgttcttgtgcttttttgaag 2676861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 28503334 - 28503662
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| |||||| ||||||||||| |    
T  28503334 caaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagcta-gtttgctggacgccaaatcg 28503432  T
Q  101 tgacacgat---------------------tcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    || ||||||                     ||||||||||| | |||||||||| |||||||||||| |||||||| ||| | |  ||| ||||||||||    
T  28503433 tggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatccctgataaggacttgtcaaccttgggtcagacgcaaatcgtgacac 28503532  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatgag 279  Q
    ||||| ||||||||||| ||||||| |||||| ||||||||||  ||||||||||||||||||||||||||||||||| ||||   |||||||    |||    
T  28503533 gatcttgggaaatcgtggcacgattgcttcagaggaagactag--tatatattgtgttcttgtgcttttttgaaggagagcttggaagagctt---agag 28503627  T
Q  280 ctttgagagagaacttggatagcaaaggagggaaccaa 317  Q
        ||||||||||||||||| ||||||||||||||||    
T  28503628 ---agagagagaacttggataacaaaggagggaaccaa 28503662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 95 - 266
Target Start/End: Complemental strand, 24968575 - 24968406
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  24968575 aaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaacctggggaccgttgcaaatcgtgccacgatctagggaaatcg 24968476  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaaga 266  Q
    || |||||||||||||||| ||||||||||| || |  |||||||||||||| |||||| | ||||||||||    
T  24968475 tggcacgatttcttcagggcaagactagtatttaaa--gtgttcttgtgcttatttgaaagggggcttaaga 24968406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 28501167 - 28501495
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| ||||||||||| |||||| |    
T  28501167 caaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagcta-gtttgcaggacaccaaatcg 28501265  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
    ||                     |||||||||||||||||| | |||||||||| |||||||||||| |||||||| ||| | |  ||| ||| ||||||    
T  28501266 tggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtcaaccttgggtcagacgcaaatcatgacac 28501365  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatgag 279  Q
    ||||| ||||||||||| ||||||| |||||| ||||||||||  |||||||||||| |||||||||||||||||||| ||||   |||||||    |||    
T  28501366 gatcttgggaaatcgtggcacgattgcttcagaggaagactag--tatatattgtgtacttgtgcttttttgaaggagagcttggaagagctt---agag 28501460  T
Q  280 ctttgagagagaacttggatagcaaaggagggaaccaa 317  Q
        ||||||||||||||||| ||||||||||||||||    
T  28501461 ---agagagagaacttggataacaaaggagggaaccaa 28501495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 95 - 255
Target Start/End: Complemental strand, 8512698 - 8512540
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8512698 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcg 8512599  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaagg 255  Q
    || ||||||||| |||||  | ||||||||| || |  ||||||||||||| |||||||||    
T  8512598 tggcacgatttcctcaggacaggactagtatttaaa--gtgttcttgtgctcttttgaagg 8512540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 95 - 255
Target Start/End: Complemental strand, 8517578 - 8517420
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8517578 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcg 8517479  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaagg 255  Q
    || ||||||||| |||||  | ||||||||| || |  ||||||||||||| |||||||||    
T  8517478 tggcacgatttcctcaggacaggactagtatttaaa--gtgttcttgtgctcttttgaagg 8517420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 95 - 255
Target Start/End: Complemental strand, 32475942 - 32475784
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||    
T  32475942 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcatcttggggaccgttgcatatcgtgacacgatctagggaaatcg 32475843  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaagg 255  Q
    || |||||||||||| ||| | ||||||||| || |  |||||||||||||  ||||||||    
T  32475842 tggcacgatttcttctgggcaggactagtatttaaa--gtgttcttgtgctcatttgaagg 32475784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 40372271 - 40372600
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||| ||||| |||||||||||||||||| |    
T  40372271 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacgccaaatcg 40372369  T
Q  101 tg---------------------acacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgaca 178  Q
    ||                     |||||||||||||||||| | ||||||||||  |||||||||||||||| ||||||| || |  ||| |||||| ||    
T  40372370 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacggacgcaaatcgtgcca 40372469  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatga 278  Q
    ||||||  ||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||   ||||          |||||||||||| | ||    
T  40372470 cgatct--ggaaatcgtgacacgatttcttcagaggaagactagtatatat--tgtgttcttgtgcagatttg----------taagagagcttggaaga 40372555  T
Q  279 gctttgagagagaa-cttggatagcaaaggagggaaccaatgggt 322  Q
    |||| ||||||||| |||||||  |||||||||||||||| ||||    
T  40372556 gcttagagagagaaacttggattacaaaggagggaaccaaagggt 40372600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 95 - 255
Target Start/End: Complemental strand, 32480800 - 32480642
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||    
T  32480800 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcatcttggggaccgttgcatatcgtgacacgatctagggaaatcg 32480701  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaagg 255  Q
    || ||||||||||||  || | ||||||||| || |  |||||||||||||  ||||||||    
T  32480700 tggcacgatttcttctaggcaggactagtatttaaa--gtgttcttgtgctcatttgaagg 32480642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 22172677 - 22173041
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgcc------ 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||| |||  |||||||||||||||          
T  22172677 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagc-cagtttgcaggacgccaaatcg 22172775  T
Q  95 ---------------aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacac 179  Q
                   |||| ||||||||||||||||||||| | |||||| ||| ||||||||||||||||||||| ||  |||||||| ||||||||||    
T  22172776 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaaggatctctgataaggactggtcaaccttggttccgttgcaaatcgtgacac 22172875  T
Q  180 gat-------------------ctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggc 260  Q
    |||                    | ||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||||||||||||||| ||  |    
T  22172876 gatttgggaaatcgtggcacgatttgggaaatcgtggcacgatttcttcagaggaagactag--tatatattgtgttcttgtgcttttttgaagaagaac 22172973  T
Q  261 ------ttaagagagcttgtatgagctttgagagagaacttggatagcaaaggagggaaccaatgggt 322  Q
            || ||||||||||||||||| || |||||||||||||||||||| |||||||||||||||    
T  22172974 aaaaaaaaaaaagagcttgtatgagcttagaaagagaacttggatagcaaagtagggaaccaatgggt 22173041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 7167867 - 7167607
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgcc------ 94  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||| |||| |||||||||||||||          
T  7167867 caaatttgtgttctggaagaacagagaaatcgtgacacgattttggcatcgtgacacaatttcaaggtgccgtgagct-agtttgcaggacgccaaatcg 7167769  T
Q  95 ---------------aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgaca 178  Q
                   |||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| |||| ||| | |  ||| |||||||||    
T  7167768 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcagacgcaaatcgtgaca 7167669  T
Q  179 cgatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgc 244  Q
    |||| |  | ||||| || |||||||||||||| ||||||||||  ||||||||||||||||||||    
T  7167668 cgattt--gaaaatcatggcacgatttcttcagaggaagactag--tatatattgtgttcttgtgc 7167607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 95 - 322
Target Start/End: Original strand, 8738652 - 8738867
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgacacgatctagggaaatc 193  Q
    |||| ||||||||||||||||||||| | ||||||||||  |||||||||||||||| |||| || || |  ||| ||||||||| |||||  |||||||    
T  8738652 aaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggacgcaaatcgtgacatgatct--ggaaatc 8738749  T
Q  194 gtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggcttaagagagcttgtatgagctttgagagag-aa 292  Q
    ||| ||||||| |||||| ||||| ||||  ||||||||||||||||||||||||||||||          ||||||||| | |||||| ||||||| ||    
T  8738750 gtggcacgattgcttcagaggaagtctag--tatatattgtgttcttgtgcttttttgaag----------gagagcttggaagagcttagagagagaaa 8738837  T
Q  293 cttggatagcaaaggagggaaccaatgggt 322  Q
    ||||||| ||||||||||||||||||||||    
T  8738838 cttggattgcaaaggagggaaccaatgggt 8738867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 95 - 262
Target Start/End: Original strand, 9090890 - 9091054
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgacacgatctagggaaatc 193  Q
    |||| ||||||||||||||||||||| | ||||||||||  |||||||||||||||| |||| || || |  ||| ||||||||| |||||  |||||||    
T  9090890 aaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggacgcaaatcgtgacatgatct--ggaaatc 9090987  T
Q  194 gtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaaggagggctt 262  Q
    ||| ||||||| |||||| ||||| ||||  ||||||||||||||||||||||||||||||||| ||||    
T  9090988 gtggcacgattgcttcagaggaagtctag--tatatattgtgttcttgtgcttttttgaaggagagctt 9091054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 2 - 244
Target Start/End: Original strand, 27352097 - 27352356
Alignment:
Q  2 aaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgcca------ 95  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||  ||||| ||||  |||||||| || |||          
T  27352097 aaatttgtggtctcgaagaacagaaaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagct-tgtttgcagaacaccaaatcgt 27352195  T
Q  96 ---------------aattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgacac 179  Q
                   ||| ||||||||||||||||||||| | ||||| |||||||||||||||||||||| |||| ||||| |  ||| ||||||||||    
T  27352196 ggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaattatcactgataaggactggtcataccttgggacggacgcaaatcgtgacac 27352295  T
Q  180 gatctagggaaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgc 244  Q
    ||| |  |||||||||| ||||||| |||||| ||||| |||  |||||||||||||||||||||    
T  27352296 gattt--ggaaatcgtggcacgattgcttcagaggaaggcta--atatatattgtgttcttgtgc 27352356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 8477987 - 8477880
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||  ||||| |||| ||||||| ||| ||||||| |    
T  8477987 caaatttgtggtctggaagaacagagaaattgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagct-agtttgctggatgccaaatcg 8477889  T
Q  101 tgacacgat 109  Q
    || ||||||    
T  8477888 tggcacgat 8477880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23198514 - 23198453
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23198514 caaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattt 23198453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 7782696 - 7782548
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||| ||||||||| ||||||||||||||| |||| |||||||||||||||||  |  || || ||||  |||||||||  ||||||| |    
T  7782696 caaatttgtggtctagaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgcggtgagct-ggtttgcagggtgccaaatcg 7782598  T
Q  101 tgacacgattcagaaacttgttggttaagtatcactgataaggactggtc 150  Q
    ||||||||||   ||||||| | ||||||| ||  |||||||||||||||    
T  7782597 tgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 7782548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23200713 - 23200652
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  23200713 caaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 23200652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26928096 - 26928157
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  26928096 caaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 26928157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3617049 - 3617111
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  3617049 caaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc 3617111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 54634725 - 54634787
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  54634725 caaatttgtggtctggaagaacagggaaatcgtgacacgattttggcattgtgacacgatttc 54634787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 6716101 - 6716162
Alignment:
Q  2 aaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  6716101 aaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc 6716162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 25637029 - 25637090
Alignment:
Q  2 aaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    ||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||    
T  25637029 aaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttc 25637090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37726283 - 37726222
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  37726283 caaatttgtggtttggaagaacagagaaatcgtgacacgaatttgatatcgtgacacgattt 37726222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 800703 - 800763
Alignment:
Q  3 aatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  800703 aatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttc 800763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1306588 - 1306526
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    ||||||| ||||||||||||||||||||||||||||| || |||| |||||||||||||||||    
T  1306588 caaatttatggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacacgatttc 1306526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33386153 - 33386214
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||||||||| | |||||||||||||||||||||||| |||| ||||||||||||||||    
T  33386153 caaatttgtggtccgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 33386214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37408052 - 37408113
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||| |||||||||| |||||||||||||||||| || ||||||||||||||||    
T  37408052 caaatttgtggtttggaagaacaaagaaatcgtgacacgattgtggcatcgtgacacgattt 37408113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2672434 - 2672493
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||  |||||||||||||    
T  2672434 caaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgat 2672493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2676590 - 2676649
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||  |||||||||||||    
T  2676590 caaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgat 2676649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 100 - 225
Target Start/End: Complemental strand, 8477868 - 8477744
Alignment:
Q  100 gtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgacacgatctagggaaatcgtgac 198  Q
    ||||||||||| ||||||||| | ||||||||||  |||||||||||||||| |||| |||      ||| |||||||||||||||  ||||||||||||    
T  8477868 gtgacacgattgagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgatct--ggaaatcgtgac 8477771  T
Q  199 acgatttcttcaggggaagactagtat 225  Q
    |||||| |||||| ||||| |||||||    
T  8477770 acgattgcttcagaggaaggctagtat 8477744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 4599092 - 4599030
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||  |||| |||||||||||    
T  4599092 caaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttc 4599030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 4601313 - 4601251
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||  |||| |||||||||||    
T  4601313 caaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttc 4601251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10055820 - 10055882
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  10055820 caaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc 10055882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10058042 - 10058104
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  10058042 caaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc 10058104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10060264 - 10060326
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  10060264 caaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc 10060326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10062486 - 10062548
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  10062486 caaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc 10062548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10064708 - 10064770
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  10064708 caaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc 10064770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10066930 - 10066992
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  10066930 caaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc 10066992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27453565 - 27453504
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||||||||||| |||| ||||||||| ||||||||| |||| ||||||||||||||||    
T  27453565 caaatttgtggtctgaaagagcagagaaattgtgacacgaatttggcatcgtgacacgattt 27453504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36029701 - 36029640
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||| |||||||||||||||||||||||||||||||  || |||| ||||||||    
T  36029701 caaatttgtggtttggaagaacagagaaatcgtgacacgattttatcaacgtgtcacgattt 36029640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 2671268 - 2671321
Alignment:
Q  189 aaatcgtgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgc 244  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  2671268 aaatcgtgacacgatttcttcagaggaagactag--tatatattgtgttcttgtgc 2671321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 10210994 - 10211054
Alignment:
Q  2 aaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||  |||||||| ||||||    
T  10210994 aaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt 10211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27974449 - 27974493
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttg 45  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  27974449 caaatttgtggtttggaagaacagagaaatcgtgacacgattttg 27974493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32143912 - 32143868
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttg 45  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  32143912 caaatttgtggtctgaaagaacagagaaatcgtgacacgattttg 32143868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6718303 - 6718345
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  6718303 caaatttgtggtctggaagaacagggaaatcgtgacacgattt 6718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8738557 - 8738599
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  8738557 caaatttgtggtctggaagaacagagaaatcgtgacatgattt 8738599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9090795 - 9090837
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  9090795 caaatttgtggtctggaagaacagagaaatcgtgacatgattt 9090837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10208793 - 10208855
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||  |||||||| |||||||    
T  10208793 caaatttgtggtttggaagaacagggaaatcatgacacgattttggtatcgtgacgcgatttc 10208855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21711810 - 21711768
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  21711810 caaatttgtggtttggaagaacagagaaatcgtgacacgattt 21711768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27027315 - 27027273
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  27027315 caaatttgtggtttggaagaacagagaaatcgtgacacgattt 27027273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 30709274 - 30709316
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  30709274 caaatttgtggtttggaagaacagagaaatcgtgacacgattt 30709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40734090 - 40734132
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  40734090 caaatttgtggtttggaagaacagagaaatcgtgacacgattt 40734132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 45282600 - 45282642
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  45282600 caaatttgtggtctggaagaacagggaaatcgtgacacgattt 45282642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 2671111 - 2671187
Alignment:
Q  32 gtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattgtgacacgat 109  Q
    |||||||||||||| |||||||||| |||||||||  ||||| |||| ||||||||||| ||||||| ||| ||||||    
T  2671111 gtgacacgattttggcatcgtgacatgatttcaaggtgccgtgagct-agtttgcaggatgccaaatcgtggcacgat 2671187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27985973 - 27986017
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttg 45  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  27985973 caaatttgtggtttggaataacagagaaatcgtgacacgattttg 27986017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 32476056 - 32475997
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||||||||| ||| ||||||||| ||||||| |||||||| | ||||||||||||||    
T  32476056 caaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 32475997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 32480914 - 32480855
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||||||||| ||| ||||||||| ||||||| |||||||| | ||||||||||||||    
T  32480914 caaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 32480855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16264938 - 16264896
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  16264938 caaatttgtggtttggaagaacagcgaaatcgtgacacgattt 16264896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 27038646 - 27038588
Alignment:
Q  5 tttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||| ||||| ||||||||||||||||||||||||   || ||||||||||||||    
T  27038646 tttgtggtttggaaaaacagagaaatcgtgacacgatttcatcaacgtgacacgatttc 27038588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39032033 - 39032075
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    ||||||||| || ||||||||||||||||||||||||||||||    
T  39032033 caaatttgttgtttggaagaacagagaaatcgtgacacgattt 39032075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 48438823 - 48438782
Alignment:
Q  2 aaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  48438823 aaatttgtggtttgtaagaacagagaaatcgtgacacgattt 48438782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 2671194 - 2671250
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca 151  Q
    |||| ||||||||||| ||||||||| | ||||||||||  ||||||||||||||||    
T  2671194 aaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtca 2671250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 1730924 - 1730959
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgac 36  Q
    |||||||||||| |||||||||||||||||||||||    
T  1730924 caaatttgtggtttggaagaacagagaaatcgtgac 1730959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 1306493 - 1306459
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgatt 204  Q
    ||||||||||||||| |||||||||||||||||||    
T  1306493 atcgtgacacgatcttgggaaatcgtgacacgatt 1306459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 32475961 - 32475927
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgatt 204  Q
    ||||||||||||||| |||||||||||||||||||    
T  32475961 atcgtgacacgatcttgggaaatcgtgacacgatt 32475927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 32480819 - 32480785
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgatt 204  Q
    ||||||||||||||| |||||||||||||||||||    
T  32480819 atcgtgacacgatcttgggaaatcgtgacacgatt 32480785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 35926098 - 35926057
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||| ||| ||||||||||||||||||||||||||||||    
T  35926098 caaatttg-ggtttggaagaacagagaaatcgtgacacgattt 35926057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40592260 - 40592302
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| ||||||||| |||||||||||||| |||||    
T  40592260 caaatttgtggtttggaagaacggagaaatcgtgacatgattt 40592302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40735021 - 40735063
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| |||| ||||||| |||||||||||||||||    
T  40735021 caaatttgtggtttggatgaacagataaatcgtgacacgattt 40735063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 6716289 - 6716345
Alignment:
Q  169 gatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaagactagtata 226  Q
    |||||||||||||| | || ||||||||||||||||||  ||| ||||||||||||||    
T  6716289 gatcgtgacacgattt-ggaaaatcgtgacacgatttcaacagaggaagactagtata 6716345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 7167595 - 7167538
Alignment:
Q  266 agagcttgtatgagctttgagagagaa-cttggatagcaaaggagggaaccaatgggt 322  Q
    |||||||| | |||||| ||||||||| |||||||| |||||||||||||||| ||||    
T  7167595 agagcttggaagagcttagagagagaaacttggataacaaaggagggaaccaaagggt 7167538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 43
Target Start/End: Complemental strand, 43404515 - 43404486
Alignment:
Q  14 tggaagaacagagaaatcgtgacacgattt 43  Q
    ||||||||||||||||||||||||||||||    
T  43404515 tggaagaacagagaaatcgtgacacgattt 43404486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 9634856 - 9634816
Alignment:
Q  22 cagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||||||||||||| |  |||||||||||||||    
T  9634856 cagagaaatcgtgacacgatttggcaatcgtgacacgattt 9634816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 23198322 - 23198269
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaagactagtat 225  Q
    ||||||||||||| |  |||||||||||||||||||  |||| |||||||||||||    
T  23198322 atcgtgacacgattt--ggaaatcgtgacacgattttatcagtggaagactagtat 23198269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 45282767 - 45282826
Alignment:
Q  166 gcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaagactagtata 226  Q
    ||||||||||||||||| | || ||||||||||||||||||  ||| ||||| ||||||||    
T  45282767 gcagatcgtgacacgat-tgggaaaatcgtgacacgatttcaacagaggaaggctagtata 45282826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 114; Significance: 8e-58; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 95 - 255
Target Start/End: Original strand, 1868 - 2026
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1868 aaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaaccttgggaccgttgcagatcgtgacacgatctagggaaatcg 1967  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaagg 255  Q
    ||||||||||||||||||| | |||||||||||| |  |||||||||||||| ||||||||    
T  1968 tgacacgatttcttcagggcaggactagtatataaa--gtgttcttgtgcttatttgaagg 2026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1754 - 1813
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||| ||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||    
T  1754 caaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 1813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 114; Significance: 8e-58; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 95 - 255
Target Start/End: Original strand, 148573 - 148731
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  148573 aaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaaccttgggaccgttgcagatcgtgacacgatctagggaaatcg 148672  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaagg 255  Q
    ||||||||||||||||||| | |||||||||||| |  |||||||||||||| ||||||||    
T  148673 tgacacgatttcttcagggcaggactagtatataaa--gtgttcttgtgcttatttgaagg 148731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 148459 - 148518
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgat 60  Q
    |||||| ||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||    
T  148459 caaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 148518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 95 - 254
Target Start/End: Complemental strand, 816 - 659
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||    
T  816 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaactttggttccgttgcagatcgtgacacgatctagggaaatcg 717  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    ||||||||||||||||||||| |||| |  ||||||||||||||||||||||||||||||    
T  716 tgacacgatttcttcaggggaggactgg--tatatattgtgttcttgtgcttttttgaag 659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 930 - 870
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  930 caaatttgtggtatggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 95 - 255
Target Start/End: Original strand, 13913 - 14071
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13913 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcg 14012  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaagg 255  Q
    || ||||||||| |||||  | ||||||||| || |  ||||||||||||| |||||||||    
T  14013 tggcacgatttcctcaggacaggactagtatttaaa--gtgttcttgtgctcttttgaagg 14071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 95 - 254
Target Start/End: Original strand, 18793 - 18950
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||||||||||| |||||||||||||||| ||||||||    
T  18793 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaagactggtcatcctggggaccgttgcaaatcgtgacacgatctaaggaaatcg 18892  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    || |||||||||||||||| | |||||  |||| ||  ||||||||||||||||||||||    
T  18893 tggcacgatttcttcagggcaggacta--atatttaaagtgttcttgtgcttttttgaag 18950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 95 - 254
Target Start/End: Original strand, 176579 - 176736
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 194  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||    
T  176579 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaactttgggtccgttgcagatcgtgacacgatctagggaaatcg 176678  T
Q  195 tgacacgatttcttcaggggaagactagtatatatattgtgttcttgtgcttttttgaag 254  Q
    || ||||||||| |||||  | ||||||||| || |  ||||||||||||| ||||||||    
T  176679 tggcacgatttcctcaggacaggactagtatttaaa--gtgttcttgtgctcttttgaag 176736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 21955 - 22062
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||||||||||| |||| || |||| ||||||||||||||||| ||  ||||| |||| ||||||||||||||||||| |    
T  21955 caaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgaggtgccgtgagct-agtttgcaggacgccaaatcg 22053  T
Q  101 tgacacgat 109  Q
    |||||||||    
T  22054 tgacacgat 22062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 204
Target Start/End: Original strand, 22050 - 22084
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgatt 204  Q
    ||||||||||||||| |||||||||||||||||||    
T  22050 atcgtgacacgatcttgggaaatcgtgacacgatt 22084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11737 - 11629
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |  ||||| ||||  |||||||||  ||||||| |    
T  11737 caaaattgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagct-ggtttgcagggtgccaaatcg 11639  T
Q  101 tgacacgatt 110  Q
    ||||||||||    
T  11638 tgacacgatt 11629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9292 - 9230
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  9292 caaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttc 9230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 11546 - 11493
Alignment:
Q  170 atcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaagactagtat 225  Q
    |||||||||||||||  |||||||||||||||||||  |||| ||||| |||||||    
T  11546 atcgtgacacgatct--ggaaatcgtgacacgattttatcagtggaaggctagtat 11493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 17447 - 17554
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||  |  ||||| ||||  |||||||||  ||||||| |    
T  17447 caaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcg 17545  T
Q  101 tgacacgat 109  Q
    |||||||||    
T  17546 tgacacgat 17554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 7927 - 8055
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattg 100  Q
    ||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||   |  ||||| || |  |||||||||  ||||||| |    
T  7927 caaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag-ttggtttgcagggtgccaaatcg 8025  T
Q  101 tgacacgattcagaaacttgttggttaagt 130  Q
    ||||||||||   |||||||||||||||||    
T  8026 tgacacgattttcaaacttgttggttaagt 8055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1724 - 1784
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  1724 caaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3170 - 3108
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  3170 caaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc 3108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 8163 - 8091
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgc 167  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||| ||| |||||||    
T  8163 aaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgggtccgttgc 8091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8258 - 8216
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8258 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 8216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 8230 - 8170
Alignment:
Q  48 atcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattgtgacacgat 109  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||    
T  8230 atcgtgacacgatttcaagtggccgtgagct-agtttgcaggacgccaaatcgtggcacgat 8170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4295 - 4234
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||||||||    
T  4295 caaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattt 4234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 4181 - 4126
Alignment:
Q  95 aaattgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc 150  Q
    |||| |||||||||| |||||||||| | ||||||||||  |||||||||||||||    
T  4181 aaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 4126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1099 - 1160
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||| || ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  1099 caaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattt 1160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 43450 - 43511
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    ||||||| |||| |||||||| |||||||||||||||||||| || ||||||||||||||||    
T  43450 caaatttatggtttggaagaatagagaaatcgtgacacgattgtggcatcgtgacacgattt 43511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36340 - 36384
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttg 45  Q
    |||||||||||| |||||||||||||||||| ||| |||||||||    
T  36340 caaatttgtggtttggaagaacagagaaatcatgatacgattttg 36384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 132768 - 132829
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 62  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||  |||||| ||||||||    
T  132768 caaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattt 132829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6294 - 6252
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  6294 caaatttgtggtttggaagaacagagaaatcgtgacacgattt 6252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3102 - 3060
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||||||| |||||||||||||||||| |||||||||||    
T  3102 caaatttgtggtttggaagaacagagaaatcatgacacgattt 3060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5874 - 5934
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatt 61  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||   |||||||||||||    
T  5874 caaatttgtggtctggaagaacagggaaatcgtgccacgattttggagtcgtgacacgatt 5934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 519 - 605
Alignment:
Q  22 cagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtaagctaagtttgcaggacgccaaattgtgacacgat 109  Q
    ||||||||||||||||||| |||| |||||||||||||||||  |  ||||| |||| ||||||||||  ||||||| ||||||||||    
T  519 cagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-agtttgcagggtgccaaatcgtgacacgat 605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 45788 - 45744
Alignment:
Q  1 caaatttgtggtctggaagaacagagaaatcgtgacacgattttg 45  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||    
T  45788 caaatttgtggtttggaagaacagagaaatcgtgacacaattttg 45744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 86191 - 86153
Alignment:
Q  5 tttgtggtctggaagaacagagaaatcgtgacacgattt 43  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  86191 tttgtggtttggaagaatagagaaatcgtgacacgattt 86153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University