View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14393_low_32 (Length: 211)
Name: NF14393_low_32
Description: NF14393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14393_low_32 |
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Alignment Details
Target: chr3 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 37147071 - 37146892
Alignment:
| Q |
1 |
tattcctttttagagttgttaagcacatcaagtttcaaagtttgttttgtcgacgccgcaccggtcccgctgtaacttgtgatatcttgttcattcttta |
100 |
Q |
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| T |
37147071 |
tattcctttttagagttgttaagcacatcaagtttcaaagtttgttttgtcgacgccgcaccggtcc-gctgtaacttgtgatatcttgttcatt-ttta |
37146974 |
T |
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| Q |
101 |
tgtttgattgagattgttggactcagaagagtgttctgcttgctgcgttgtagggcgtttggttcttggtttcgttctgtgt |
182 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37146973 |
tgtttgattgagattgttggactcagaagagtgttctgcttgctgcgttgtagggcgtttggttcttggtttcgttctgtgt |
37146892 |
T |
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