View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14394_high_19 (Length: 241)

Name: NF14394_high_19
Description: NF14394
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14394_high_19
NF14394_high_19
[»] chr8 (27 HSPs)
chr8 (1-199)||(35866769-35866954)
chr8 (77-193)||(28562583-28562699)
chr8 (78-193)||(28568080-28568195)
chr8 (78-193)||(28575673-28575788)
chr8 (77-197)||(27035153-27035273)
chr8 (84-193)||(26628822-26628931)
chr8 (75-197)||(36068238-36068360)
chr8 (77-197)||(3585609-3585729)
chr8 (77-197)||(11174222-11174342)
chr8 (77-197)||(11646324-11646444)
chr8 (78-197)||(7147071-7147190)
chr8 (78-197)||(40058303-40058422)
chr8 (78-197)||(40918731-40918850)
chr8 (77-197)||(30999523-30999643)
chr8 (77-197)||(43275398-43275518)
chr8 (77-197)||(2539929-2540049)
chr8 (89-193)||(27563878-27563982)
chr8 (78-197)||(37345729-37345848)
chr8 (78-193)||(45400770-45400885)
chr8 (95-197)||(20546310-20546412)
chr8 (107-193)||(13880984-13881070)
chr8 (91-193)||(10180881-10180983)
chr8 (113-168)||(37510457-37510512)
chr8 (107-183)||(167632-167708)
chr8 (107-166)||(13327788-13327847)
chr8 (130-187)||(33751233-33751289)
chr8 (107-183)||(11993902-11993978)
[»] chr5 (34 HSPs)
chr5 (78-193)||(734339-734454)
chr5 (78-197)||(25683229-25683348)
chr5 (84-185)||(39071052-39071153)
chr5 (77-197)||(37900622-37900742)
chr5 (76-187)||(10285056-10285167)
chr5 (74-197)||(30720488-30720611)
chr5 (78-197)||(40886610-40886729)
chr5 (85-193)||(11319718-11319826)
chr5 (77-197)||(12806852-12806972)
chr5 (77-192)||(1056624-1056737)
chr5 (78-197)||(36561099-36561218)
chr5 (112-193)||(11795317-11795398)
chr5 (76-197)||(23097722-23097843)
chr5 (80-199)||(16983413-16983532)
chr5 (77-197)||(25773807-25773927)
chr5 (107-192)||(16054274-16054359)
chr5 (107-192)||(30402991-30403076)
chr5 (78-187)||(26168076-26168185)
chr5 (78-186)||(1055773-1055885)
chr5 (121-193)||(21638931-21639003)
chr5 (115-181)||(15629310-15629376)
chr5 (131-187)||(11797714-11797770)
chr5 (76-116)||(39070881-39070921)
chr5 (107-166)||(42174263-42174322)
chr5 (107-197)||(12723097-12723187)
chr5 (107-197)||(12784580-12784670)
chr5 (77-123)||(21639770-21639816)
chr5 (107-192)||(31802780-31802864)
chr5 (107-183)||(1297890-1297966)
chr5 (107-183)||(4175632-4175708)
chr5 (120-192)||(4985318-4985390)
chr5 (125-193)||(7408340-7408408)
chr5 (107-183)||(9076062-9076138)
chr5 (107-183)||(42911541-42911617)
[»] chr3 (36 HSPs)
chr3 (78-193)||(18355868-18355983)
chr3 (89-193)||(54086714-54086818)
chr3 (75-186)||(6901730-6901840)
chr3 (78-197)||(13365001-13365120)
chr3 (78-197)||(46694110-46694229)
chr3 (75-185)||(29375302-29375412)
chr3 (75-187)||(19241665-19241777)
chr3 (77-197)||(36881438-36881558)
chr3 (77-197)||(23087930-23088050)
chr3 (78-197)||(3383234-3383353)
chr3 (87-186)||(24064389-24064488)
chr3 (76-163)||(26783661-26783748)
chr3 (78-197)||(32834989-32835108)
chr3 (89-192)||(48436387-48436490)
chr3 (77-187)||(48820508-48820618)
chr3 (76-197)||(13703370-13703491)
chr3 (78-197)||(199013-199132)
chr3 (107-193)||(52805057-52805142)
chr3 (115-193)||(53559648-53559726)
chr3 (95-197)||(43750294-43750396)
chr3 (113-184)||(1455186-1455257)
chr3 (83-186)||(19896935-19897038)
chr3 (119-168)||(37293595-37293644)
chr3 (85-186)||(52009051-52009158)
chr3 (106-172)||(31873891-31873957)
chr3 (84-186)||(48963288-48963390)
chr3 (107-192)||(48151994-48152079)
chr3 (107-192)||(48214076-48214161)
chr3 (107-171)||(17755357-17755421)
chr3 (107-171)||(19056677-19056741)
chr3 (139-197)||(37781094-37781152)
chr3 (75-116)||(13364840-13364881)
chr3 (107-192)||(32980649-32980734)
chr3 (137-197)||(2154186-2154246)
chr3 (107-183)||(34266599-34266675)
chr3 (137-197)||(43159907-43159967)
[»] chr2 (33 HSPs)
chr2 (78-192)||(40756911-40757025)
chr2 (75-197)||(22388135-22388257)
chr2 (107-186)||(19976497-19976576)
chr2 (84-193)||(37284525-37284632)
chr2 (77-197)||(23366947-23367067)
chr2 (77-197)||(28110094-28110214)
chr2 (77-184)||(32838928-32839035)
chr2 (77-197)||(3519065-3519185)
chr2 (81-193)||(36447420-36447532)
chr2 (78-197)||(12969740-12969859)
chr2 (78-193)||(39561895-39562005)
chr2 (77-197)||(1102659-1102779)
chr2 (77-197)||(39938328-39938448)
chr2 (78-197)||(37673743-37673862)
chr2 (78-197)||(1646445-1646564)
chr2 (107-166)||(14779964-14780023)
chr2 (112-186)||(34242143-34242217)
chr2 (107-178)||(1002760-1002831)
chr2 (85-183)||(4917933-4918031)
chr2 (119-193)||(27900991-27901065)
chr2 (107-183)||(479131-479207)
chr2 (107-183)||(15677449-15677525)
chr2 (139-187)||(28401396-28401444)
chr2 (107-166)||(14541340-14541399)
chr2 (107-192)||(13753964-13754049)
chr2 (107-183)||(36375580-36375656)
chr2 (151-192)||(36917009-36917050)
chr2 (107-183)||(10812208-10812284)
chr2 (107-183)||(11560205-11560281)
chr2 (151-191)||(32901136-32901176)
chr2 (107-183)||(34357187-34357263)
chr2 (137-197)||(43077331-43077391)
chr2 (107-183)||(44360443-44360519)
[»] chr4 (38 HSPs)
chr4 (78-193)||(19692884-19692999)
chr4 (78-193)||(19703469-19703584)
chr4 (85-192)||(6128956-6129063)
chr4 (77-197)||(22321267-22321387)
chr4 (75-197)||(21310579-21310701)
chr4 (74-192)||(32543642-32543760)
chr4 (77-197)||(14261202-14261322)
chr4 (77-197)||(24706246-24706366)
chr4 (77-197)||(25704809-25704929)
chr4 (78-197)||(12071718-12071837)
chr4 (78-197)||(40122487-40122606)
chr4 (78-173)||(50839031-50839126)
chr4 (79-197)||(21064919-21065037)
chr4 (77-197)||(20249013-20249133)
chr4 (77-197)||(44568995-44569115)
chr4 (88-197)||(50768020-50768129)
chr4 (75-197)||(21661532-21661654)
chr4 (75-197)||(21670296-21670418)
chr4 (88-193)||(18507276-18507381)
chr4 (107-193)||(48652386-48652472)
chr4 (95-186)||(31892401-31892492)
chr4 (117-188)||(51777771-51777841)
chr4 (143-192)||(26676645-26676694)
chr4 (106-192)||(8735400-8735486)
chr4 (85-152)||(26676577-26676645)
chr4 (107-183)||(39683870-39683946)
chr4 (120-192)||(42629342-42629414)
chr4 (107-183)||(53599942-53600018)
chr4 (107-183)||(56576259-56576335)
chr4 (80-171)||(20714322-20714413)
chr4 (155-192)||(20714426-20714463)
chr4 (107-183)||(3436223-3436299)
chr4 (137-177)||(26906551-26906591)
chr4 (107-183)||(38542432-38542508)
chr4 (131-183)||(38617852-38617904)
chr4 (107-183)||(42513182-42513258)
chr4 (107-183)||(44069043-44069119)
chr4 (111-183)||(50623430-50623502)
[»] chr6 (22 HSPs)
chr6 (75-197)||(17942601-17942723)
chr6 (77-197)||(15064694-15064814)
chr6 (76-197)||(8235783-8235904)
chr6 (77-197)||(8626640-8626760)
chr6 (77-197)||(13757365-13757485)
chr6 (78-197)||(29260350-29260469)
chr6 (77-197)||(1605736-1605856)
chr6 (78-197)||(7761458-7761577)
chr6 (75-193)||(20398235-20398353)
chr6 (78-197)||(4129585-4129703)
chr6 (75-186)||(1814762-1814873)
chr6 (115-193)||(3798261-3798339)
chr6 (88-187)||(26860932-26861031)
chr6 (78-197)||(31559738-31559857)
chr6 (78-197)||(30734483-30734602)
chr6 (131-197)||(847829-847895)
chr6 (137-197)||(31244891-31244951)
chr6 (107-166)||(30236987-30237046)
chr6 (107-192)||(3849074-3849159)
chr6 (152-193)||(14287149-14287190)
chr6 (81-170)||(24120645-24120734)
chr6 (107-183)||(22050058-22050134)
[»] chr1 (34 HSPs)
chr1 (85-193)||(24876723-24876831)
chr1 (75-197)||(23526397-23526519)
chr1 (77-197)||(284491-284611)
chr1 (77-193)||(51064753-51064869)
chr1 (78-197)||(34458724-34458843)
chr1 (77-197)||(40783656-40783776)
chr1 (86-197)||(40261293-40261404)
chr1 (78-197)||(321784-321903)
chr1 (78-197)||(23045279-23045398)
chr1 (78-193)||(31003787-31003902)
chr1 (78-197)||(47037852-47037971)
chr1 (83-197)||(46771796-46771910)
chr1 (78-185)||(18396864-18396971)
chr1 (77-186)||(24771905-24772014)
chr1 (77-187)||(1837826-1837937)
chr1 (83-193)||(14925626-14925734)
chr1 (85-192)||(25929261-25929368)
chr1 (115-186)||(40052501-40052572)
chr1 (75-192)||(23166848-23166965)
chr1 (78-193)||(27143014-27143127)
chr1 (85-197)||(31061463-31061578)
chr1 (77-197)||(33082902-33083022)
chr1 (84-197)||(27210961-27211074)
chr1 (85-172)||(40562293-40562380)
chr1 (114-169)||(14350510-14350565)
chr1 (147-193)||(3657236-3657282)
chr1 (114-172)||(1749457-1749515)
chr1 (107-192)||(19455542-19455626)
chr1 (107-192)||(32347987-32348072)
chr1 (107-171)||(19093277-19093341)
chr1 (115-185)||(17581069-17581139)
chr1 (107-192)||(5597832-5597917)
chr1 (107-183)||(35531447-35531523)
chr1 (137-197)||(51613450-51613510)
[»] chr7 (21 HSPs)
chr7 (75-197)||(27813969-27814091)
chr7 (77-197)||(47110608-47110728)
chr7 (77-197)||(36453123-36453243)
chr7 (78-193)||(16662255-16662370)
chr7 (78-193)||(17636615-17636730)
chr7 (77-197)||(25614352-25614472)
chr7 (78-197)||(10981666-10981785)
chr7 (76-197)||(40349120-40349240)
chr7 (113-197)||(3091671-3091755)
chr7 (107-193)||(27941013-27941099)
chr7 (77-183)||(16360549-16360654)
chr7 (107-187)||(24456794-24456874)
chr7 (136-197)||(3498813-3498874)
chr7 (107-189)||(7743427-7743509)
chr7 (81-193)||(8380100-8380210)
chr7 (107-192)||(35112438-35112523)
chr7 (107-183)||(31399089-31399165)
chr7 (120-186)||(37983300-37983366)
chr7 (107-183)||(33257890-33257966)
chr7 (113-167)||(28200488-28200542)
chr7 (151-187)||(6737258-6737294)
[»] scaffold0939 (1 HSPs)
scaffold0939 (108-186)||(1110-1188)
[»] scaffold0168 (1 HSPs)
scaffold0168 (77-193)||(7830-7946)
[»] scaffold1770 (1 HSPs)
scaffold1770 (78-197)||(320-438)
[»] scaffold0054 (1 HSPs)
scaffold0054 (78-186)||(45622-45730)
[»] scaffold0025 (1 HSPs)
scaffold0025 (112-192)||(65199-65279)
[»] scaffold0343 (1 HSPs)
scaffold0343 (88-193)||(6911-7015)
[»] scaffold0076 (1 HSPs)
scaffold0076 (77-193)||(15322-15438)
[»] scaffold0056 (1 HSPs)
scaffold0056 (88-193)||(71245-71350)
[»] scaffold0062 (1 HSPs)
scaffold0062 (106-186)||(295-375)
[»] scaffold0060 (1 HSPs)
scaffold0060 (77-193)||(10904-11025)
[»] scaffold0001 (1 HSPs)
scaffold0001 (131-192)||(419639-419700)
[»] scaffold0172 (1 HSPs)
scaffold0172 (107-183)||(26283-26359)
[»] scaffold0129 (1 HSPs)
scaffold0129 (77-129)||(19007-19059)
[»] scaffold0009 (1 HSPs)
scaffold0009 (137-197)||(147270-147330)


Alignment Details
Target: chr8 (Bit Score: 139; Significance: 7e-73; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 35866954 - 35866769
Alignment:
Q  1 gttctatgcatgtacatttgacaattaatcaagcgattaaccatgctaattaacttcttatttagcagctcataatatactccctccgtttcacaatact 100  Q
    |||||||||||||||||||||||||||||||||||||||||             ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  35866954 gttctatgcatgtacatttgacaattaatcaagcgattaac-------------ttcttatttggcagctcataatatactccatccgtttcacaatact 35866868  T
Q  101 tgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttacatatct 199  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35866867 tgtctattttggagaataattttgtttcattttacttgtcactttcaagtttcaattcaacattaattattggtttatcaataatactcttacatatct 35866769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 77 - 193
Target Start/End: Complemental strand, 28562699 - 28562583
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||| ||||||||||| |  |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28562699 atactccctccgtctcacaatacttatccattttgaagaattattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 28562600  T
Q  177 atcaataatactcttac 193  Q
    ||||||| |||||||||    
T  28562599 atcaatattactcttac 28562583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 28568195 - 28568080
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28568195 tactccctccatttcacaatacttgtccattttggagaattattttgtttcattttacttgtcactttgaagtttcaatgcaacattaattattggttta 28568096  T
Q  178 tcaataatactcttac 193  Q
    |||||| ||| |||||    
T  28568095 tcaatattacccttac 28568080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 28575788 - 28575673
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28575788 tactccctccatttcacaatacttgtccattttggagaattattttgtttcattttacttgtcactttgaagtttcaatgcaacattaattattggttta 28575689  T
Q  178 tcaataatactcttac 193  Q
    |||||| ||| |||||    
T  28575688 tcaatattacccttac 28575673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 27035273 - 27035153
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||    
T  27035273 atactgcctccgtttcataatacttgttcattttggagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtctt 27035174  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| |||||||||    
T  27035173 gtcaataatacccttacatat 27035153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 26628822 - 26628931
Alignment:
Q  84 ctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||||||||| ||||  ||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  26628822 ctccgtttcacaatacatgttgcttttggagaataattttgtttcactttatttgtcattttcaagtttcaatgcaacattaattattgatttatcaata 26628921  T
Q  184 atactcttac 193  Q
    |||| |||||    
T  26628922 atacccttac 26628931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 197
Target Start/End: Complemental strand, 36068360 - 36068238
Alignment:
Q  75 atatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggt 174  Q
    ||||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||      
T  36068360 atatactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgac 36068261  T
Q  175 ttatcaataatactcttacatat 197  Q
    || |||||||||| ||| |||||    
T  36068260 ttgtcaataatacccttgcatat 36068238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 3585729 - 3585609
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||| ||||||||| ||||||||| |||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||    
T  3585729 atactccatccgtttcataatacttgtctattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgactt 3585630  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  3585629 gtcaataatacccttgcatat 3585609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 11174222 - 11174342
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||| |||||  |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||    
T  11174222 atactccctccgtttcataatacttgttcattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtctt 11174321  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  11174322 gtcaataatacccttgcatat 11174342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 11646324 - 11646444
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||    
T  11646324 atactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgactt 11646423  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  11646424 gtcaataatacccttgcatat 11646444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 7147190 - 7147071
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||     
T  7147190 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 7147091  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  7147090 tcaataatacccttgcatat 7147071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 40058303 - 40058422
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||     
T  40058303 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 40058402  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  40058403 tcaataatacccttgcatat 40058422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 40918731 - 40918850
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||     
T  40918731 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 40918830  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  40918831 tcaataatacccttgcatat 40918850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 30999523 - 30999643
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||  ||    
T  30999523 atactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgttactttcaagtttcaatgcaacattaattattgtctt 30999622  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  30999623 gtcaataatacccttgcatat 30999643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 43275398 - 43275518
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||   ||    
T  43275398 atactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattatctt 43275497  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  43275498 gtcaataatacccttgcatat 43275518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 2539929 - 2540049
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||| ||||||||| |||||||||  |||||  |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||    
T  2539929 atactccttccgtttcataatacttgtccattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtctt 2540028  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  2540029 gtcaataatacccttgcatat 2540049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 27563878 - 27563982
Alignment:
Q  89 tttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatact 188  Q
    |||||| ||||||||   |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||     
T  27563878 tttcacgatacttgtcgcttttggagaacaattttgtttcatattacttgtcactttcaagtttcaatgcaacattaattattgacttgtcaataatacc 27563977  T
Q  189 cttac 193  Q
    |||||    
T  27563978 cttac 27563982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 37345848 - 37345729
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||| ||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||  ||     
T  37345848 tactccttccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcattttcaagtttcaatgcaacattaattattgtcttg 37345749  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  37345748 tcaataatacccttgcatat 37345729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 78 - 193
Target Start/End: Original strand, 45400770 - 45400885
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||  ||   ||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||||  ||||    
T  45400770 tactccctccgtttcataatacaagtcgtttttggagaataattttgtttcactttatttgtcacttttaaatttcaatgcaacattaattattaattta 45400869  T
Q  178 tcaataatactcttac 193  Q
    ||||||||| ||||||    
T  45400870 tcaataatattcttac 45400885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 20546310 - 20546412
Alignment:
Q  95 aatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttaca 194  Q
    |||||||||  |||||| |||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||||  || |||||||||| ||||||    
T  20546310 aatacttgtccattttgaagaataattttgtttcacaatacttgtcactttcaggtttcaatgcaacattaattattgtcttgtcaataatacccttaca 20546409  T
Q  195 tat 197  Q
    |||    
T  20546410 tat 20546412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 13880984 - 13881070
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttac 193  Q
    |||||| ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| ||| | ||||||| ||||||    
T  13880984 ttttggtgaataattttgtttcaaattacttgtcactttcaagtttcaatgcaatattaattattgatttgttaataataatcttac 13881070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 193
Target Start/End: Original strand, 10180881 - 10180983
Alignment:
Q  91 tcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactct 190  Q
    ||||||||||| |   |||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||| ||||   ||| |||||||||| ||    
T  10180881 tcacaatacttatcacttttggagaacaattttgtttcacattacttgtcactttcaagtttcaatgcaacattagttatgaatttgtcaataataccct 10180980  T
Q  191 tac 193  Q
    |||    
T  10180981 tac 10180983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 37510512 - 37510457
Alignment:
Q  113 agaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaatt 168  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||| || |||||||    
T  37510512 agaataattttgtttcattttacttatcacttttaagtttcaatgtaaaattaatt 37510457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 167708 - 167632
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| |||||||||| | ||||  ||||||||||||  |||||||||||||||| | ||| |||| |||||    
T  167708 ttttggagaaaaattttgttttaatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaata 167632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 13327788 - 13327847
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaa 166  Q
    |||||||||| |||||||||||  ||||  ||||||||||||  ||||||||||||||||    
T  13327788 ttttggagaaaaattttgtttctatttaactgtcactttcaaagttcaatgcaacattaa 13327847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 33751233 - 33751289
Alignment:
Q  130 ttttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatac 187  Q
    |||||||| ||| ||||||  |||||||||| ||||||||||| ||||||||||||||    
T  33751233 ttttactt-tcattttcaaagttcaatgcaatattaattattgttttatcaataatac 33751289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 11993902 - 11993978
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| |||||||||||  ||||  ||||||||||||  || ||||||||||||| | ||| |||| |||||    
T  11993902 ttttggagaaaaattttgtttctatttaactgtcactttcaaagtttaatgcaacattaaatgttgttttaccaata 11993978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 3e-47; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 78 - 193
Target Start/End: Original strand, 734339 - 734454
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    ||||||| ||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  734339 tactcccaccgtttcacaatacttgtccattttggagaataattttgtttcactttacttgtcactttcaagtttcaatacaacattaattattggttta 734438  T
Q  178 tcaataatactcttac 193  Q
    ||||||||||||||||    
T  734439 tcaataatactcttac 734454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 25683229 - 25683348
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||     
T  25683229 tactccctccgtttcataatacttgtccattttggagaataattttgtttcataaaacttgtcactttcaagtttcaatgcaacattaattattgttttg 25683328  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| |||||||||    
T  25683329 tcaataatacccttacatat 25683348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 39071153 - 39071052
Alignment:
Q  84 ctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    ||||| |||||||||||||| |||||| |||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  39071153 ctccgattcacaatacttgtctatttttgagaataattttgtttcactttacttgtcacttttaagtatcaatgcaacattaattattggtttatcaata 39071054  T
Q  184 at 185  Q
    ||    
T  39071053 at 39071052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 37900622 - 37900742
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||| ||||||||| ||||||||| ||||||| |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||    
T  37900622 atactccttccgtttcataatacttgtctattttgaagaataattttgtttcacgatacttgtcactttcaagtttcaatgcaacattaattattgtctt 37900721  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  37900722 gtcaataatacccttgcatat 37900742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 10285056 - 10285167
Alignment:
Q  76 tatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtt 175  Q
    |||||||||||||||||| ||||||||| ||||||  |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  |    
T  10285056 tatactccctccgtttcataatacttgtctattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtct 10285155  T
Q  176 tatcaataatac 187  Q
    | ||||||||||    
T  10285156 tgtcaataatac 10285167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 74 - 197
Target Start/End: Original strand, 30720488 - 30720611
Alignment:
Q  74 aatatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattgg 173  Q
    |||||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||| ||||||     
T  30720488 aatatactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattagttattgt 30720587  T
Q  174 tttatcaataatactcttacatat 197  Q
     || |||||||||| ||| |||||    
T  30720588 cttgtcaataatacccttgcatat 30720611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 40886610 - 40886729
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||     
T  40886610 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 40886709  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  40886710 tcaataatacccttgcatat 40886729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 11319826 - 11319718
Alignment:
Q  85 tccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataa 184  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||| |||| || ||||||||| |||| ||||||| ||||||||||||||||| |||||    
T  11319826 tccgtttcataatacttgtctattttagagaataattttgtttcactttatttatcactttcaggttttaatgcaatattaattattggtttattaataa 11319727  T
Q  185 tactcttac 193  Q
    |||||||||    
T  11319726 tactcttac 11319718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 12806852 - 12806972
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   |||||||| |||||||||||||||||||||||||||||||  ||    
T  12806852 atactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtctctttcaagtttcaatgcaacattaattattgtctt 12806951  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  12806952 gtcaataatacccttgcatat 12806972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 1056624 - 1056737
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    |||||||||||||||||||||||||||   ||||||||||||||||| ||||| || |||  ||||||||||||||||||||||||||||||||| ||||    
T  1056624 atactccctccgtttcacaatacttgtcacttttggagaataattttatttcaatt-acta-tcactttcaagtttcaatgcaacattaattattagttt 1056721  T
Q  177 atcaataatactctta 192  Q
     |||||||||||||||    
T  1056722 gtcaataatactctta 1056737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 36561099 - 36561218
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  ||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||| |||||  ||     
T  36561099 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaagtattgtcttg 36561198  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  36561199 tcaataatacccttgcatat 36561218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 11795317 - 11795398
Alignment:
Q  112 gagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttac 193  Q
    |||||||||||||||||| |||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11795317 gagaataattttgtttcactttatttatcactttcaagtttcaatgcaacattaattataggtttatcaataatactcttac 11795398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 23097722 - 23097843
Alignment:
Q  76 tatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtt 175  Q
    |||||||| ||||||||| |||||||||  ||||||||||||||||||||||||   ||||||| ||||||| |||||||||||| |||||||||||  |    
T  23097722 tatactccttccgtttcataatacttgtccattttggagaataattttgtttcacaatacttgttactttcatgtttcaatgcaatattaattattgtct 23097821  T
Q  176 tatcaataatactcttacatat 197  Q
    | |||||||||| |||||||||    
T  23097822 tgtcaataatacccttacatat 23097843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 199
Target Start/End: Complemental strand, 16983532 - 16983413
Alignment:
Q  80 ctccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatc 179  Q
    ||||||| |||| | ||||||||| ||||||| |||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||  || ||    
T  16983532 ctccctctgttttataatacttgtctattttgaagaataattttgtttcacaatacttgtcacttttaagtttcaatgcaacattaattattgtcttttc 16983433  T
Q  180 aataatactcttacatatct 199  Q
    |||||||| ||| |||||||    
T  16983432 aataatacccttgcatatct 16983413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 25773927 - 25773807
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    |||||| |||||||||| |||||||||  ||||| |||||||| |||||||||   ||||| ||||||||||||||||||||||||||||||||||  ||    
T  25773927 atactctctccgtttcataatacttgtccattttagagaataagtttgtttcacaatacttatcactttcaagtttcaatgcaacattaattattgtctt 25773828  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  25773827 gtcaataatacccttgcatat 25773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 16054359 - 16054274
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    |||||||||||||||||| |||| |||  |||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  16054359 ttttggagaataattttggttcactttggttgtcactttcaagtttcaatgcaacattaattattagtttgtcaataataccctta 16054274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 30402991 - 30403076
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    |||| |||||||||||| ||||||||||||||||||||| |||||||||| ||| ||||||||||||||| |||||||||| ||||    
T  30402991 ttttagagaataattttatttcattttacttgtcacttttaagtttcaatacaaaattaattattggtttgtcaataataccctta 30403076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 26168185 - 26168076
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||| |||||||||| |||| |||   |||| |||||||||||||||||| |||| ||||||||||||||||||||||||| |||||| ||| ||||     
T  26168185 tactccttccgtttcacgatacatgtcgtttttagagaataattttgtttcactttaattgtcactttcaagtttcaatgcaagattaatgatttgtttg 26168086  T
Q  178 tcaataatac 187  Q
    | ||||||||    
T  26168085 ttaataatac 26168076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 1055773 - 1055885
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtca----ctttcaagtttcaatgcaacattaattattgg 173  Q
    |||||| |||||||| ||||| ||||   ||||||||||||| |||| |||| ||||||||||     || |||||||||||||||||||||| ||||||    
T  1055773 tactccttccgtttcccaatatttgtcgtttttggagaataaatttgcttcactttacttgtctgtctctctcaagtttcaatgcaacattaaatattgg 1055872  T
Q  174 tttatcaataata 186  Q
    ||| | |||||||    
T  1055873 tttgttaataata 1055885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 21639003 - 21638931
Alignment:
Q  121 tttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttac 193  Q
    |||||| || || ||||||||| || |||||| ||||||||||||| ||||||||| |||||||| |||||||    
T  21639003 tttgttccacttgacttgtcacatttaagtttaaatgcaacattaaatattggtttgtcaataattctcttac 21638931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 15629376 - 15629310
Alignment:
Q  115 aataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaa 181  Q
    ||||||||||||||| ||||||||| | ||| || |||||||||| |||||||||||  ||||||||    
T  15629376 aataattttgtttcactttacttgttatttttaaatttcaatgcagcattaattattaatttatcaa 15629310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 11797770 - 11797714
Alignment:
Q  131 tttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatac 187  Q
    ||||||||||| |||||| ||||||| |||||||||||||| |||| ||||| ||||    
T  11797770 tttacttgtcattttcaaatttcaatacaacattaattattagtttgtcaatgatac 11797714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 39070881 - 39070921
Alignment:
Q  76 tatactccctccgtttcacaatacttgtttattttggagaa 116  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  39070881 tatactccctccgtttcacaatacttgttcattttgaagaa 39070921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 42174263 - 42174322
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaa 166  Q
    ||||| ||||||||||||||||| ||||| ||||||||| |  ||||||||||| |||||    
T  42174263 ttttgaagaataattttgtttcaatttacctgtcacttttatatttcaatgcaatattaa 42174322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 12723187 - 12723097
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttacatat 197  Q
    |||||||||| ||||||||| |  |||| |||||||||| ||  |||||||||||| ||||| ||| |||| ||||| ||| |||| ||||    
T  12723187 ttttggagaaaaattttgttcctatttaattgtcacttttaaagttcaatgcaacactaattgttgttttaccaatattacccttatatat 12723097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 12784670 - 12784580
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttacatat 197  Q
    |||||||||| ||||||||| |  ||||  ||||||||||||  |||||||||||| ||||| ||| |||| ||||| ||| |||| ||||    
T  12784670 ttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacactaattgttgttttaccaatattacccttatatat 12784580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 21639816 - 21639770
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataatttt 123  Q
    |||| |||||| ||||||||||||||||  |||||||||||||||||    
T  21639816 ataccccctccatttcacaatacttgttgcttttggagaataatttt 21639770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 31802780 - 31802864
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    |||||||||| |||||||||||| ||||  ||||| ||||||  |||||||||||||||| | ||| |||| ||||| ||| ||||    
T  31802780 ttttggagaa-aattttgtttcaatttaactgtcattttcaaagttcaatgcaacattaaatgttgttttaccaatattaccctta 31802864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 1297966 - 1297890
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| | ||||||| |  ||||  ||||||||||||  |||||||||||||||| ||||| |||| |||||    
T  1297966 ttttggagaaaatttttgttcctatttaactgtcactttcaaaattcaatgcaacattaaatattgttttaccaata 1297890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 4175708 - 4175632
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| | ||||||| |  ||||  ||||||||||||  |||||||||||||||| | ||| ||||||||||    
T  4175708 ttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatcaata 4175632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 4985390 - 4985318
Alignment:
Q  120 ttttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    |||||||||  ||||  ||||||||||||  |||||||||||||||| || || |||||||||| ||| ||||    
T  4985390 ttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaataatgttttatcaatattaccctta 4985318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 7408340 - 7408408
Alignment:
Q  125 tttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttac 193  Q
    ||||| |||| |||||||||||||  ||||| |||| ||||| ||||| |||| ||||| |||||||||    
T  7408340 tttcaatttaattgtcactttcaaagttcaaagcaatattaaatattgttttaccaatattactcttac 7408408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 9076062 - 9076138
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    ||||||| || ||||||||| |  ||||  ||||||||||||  |||||||||||||||| | ||| ||||||||||    
T  9076062 ttttggataaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatcaata 9076138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 42911541 - 42911617
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| | ||||||| |  ||||  ||||||||||||  |||||||||||||||| ||||| |||| |||||    
T  42911541 ttttggagaaaatttttgttactatttaactgtcactttcaaagttcaatgcaacattaaatattgttttaccaata 42911617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 78 - 193
Target Start/End: Original strand, 18355868 - 18355983
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  18355868 tactccctccgtttcacaatacttgtccattttgaagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacattaattattgattta 18355967  T
Q  178 tcaataatactcttac 193  Q
    |||||||||| |||||    
T  18355968 tcaataatacccttac 18355983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 54086818 - 54086714
Alignment:
Q  89 tttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatact 188  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||     
T  54086818 tttcacaatacttgtccattttggagaatacttttgtttcattttatttgtcactttcaagtttcaatacaacattaattattgatttatcaataatacc 54086719  T
Q  189 cttac 193  Q
    |||||    
T  54086718 cttac 54086714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 75 - 186
Target Start/End: Complemental strand, 6901840 - 6901730
Alignment:
Q  75 atatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggt 174  Q
    ||||| || ||||||||||||||| ||||  |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |    
T  6901840 atatagtcgctccgtttcacaata-ttgtccattttggagaataattttgtttcactttacttgtcacttttaagtttcaatgcaacattaatcattgat 6901742  T
Q  175 ttatcaataata 186  Q
    ||||||||||||    
T  6901741 ttatcaataata 6901730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 13365120 - 13365001
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||     
T  13365120 tactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 13365021  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  13365020 tcaataatacccttgcatat 13365001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 46694110 - 46694229
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||     
T  46694110 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 46694209  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  46694210 tcaataatacccttgcatat 46694229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 29375412 - 29375302
Alignment:
Q  75 atatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggt 174  Q
    ||||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||      
T  29375412 atatactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtc 29375313  T
Q  175 ttatcaataat 185  Q
    || ||||||||    
T  29375312 ttgtcaataat 29375302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 75 - 187
Target Start/End: Original strand, 19241665 - 19241777
Alignment:
Q  75 atatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggt 174  Q
    ||||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||      
T  19241665 atatactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcacttttaagtttcaatgcaacattaattattgac 19241764  T
Q  175 ttatcaataatac 187  Q
    || ||||||||||    
T  19241765 ttgtcaataatac 19241777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 36881558 - 36881438
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   |||||||| |||||||||||||||||||||||||||||||  ||    
T  36881558 atactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtctt 36881459  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  36881458 gtcaataatacccttgcatat 36881438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 23087930 - 23088050
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||| ||||||||||| |||||||||  |||||  |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||    
T  23087930 atacttcctccgtttcataatacttgtcgattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtctt 23088029  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  23088030 gtcaataatacccttgcatat 23088050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 3383353 - 3383234
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||| | ||||| | |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||     
T  3383353 tactcctttcgttttataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 3383254  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||||||| |||||    
T  3383253 tcaataatactcttgcatat 3383234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 186
Target Start/End: Complemental strand, 24064488 - 24064389
Alignment:
Q  87 cgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataata 186  Q
    ||||||||||||| |||   ||||||||||||||||| ||||| ||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  24064488 cgtttcacaatacatgtcgtttttggagaataattttatttcactttacatgtcactttcaagttttaatgtaacattaattattggtttatcaataata 24064389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 26783748 - 26783661
Alignment:
Q  76 tatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacat 163  Q
    |||||| ||||||||| ||||||||||| ||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26783748 tatacttcctccgttttacaatacttgtctattttaaagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacat 26783661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 32834989 - 32835108
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  ||| | ||||||||||| |||||||  ||||||||| |||||||||||||||||||||||| ||||| |||     
T  32834989 tactccctccgtttcataatacttgtccattgtagagaataatttcgtttcatagtacttgtcattttcaagtttcaatgcaacattaagtattgttttg 32835088  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| |||| ||||    
T  32835089 tcaataatacccttaaatat 32835108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 192
Target Start/End: Complemental strand, 48436490 - 48436387
Alignment:
Q  89 tttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatact 188  Q
    |||||||||| ||||   |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| | || ||||||||||     
T  48436490 tttcacaatatttgtcacttttggagaataattttgtttcacattacttgtcactttcaagtttcaatgcaacattaattattagcttgtcaataataca 48436391  T
Q  189 ctta 192  Q
    ||||    
T  48436390 ctta 48436387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 48820618 - 48820508
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||| ||||||||||| |||||||||  |||||  | |||||||||||||||   |||||||||||||||||||||||||||||||||||||||| |||    
T  48820618 atacttcctccgtttcataatacttgtccattttaaaaaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtttt 48820519  T
Q  177 atcaataatac 187  Q
     ||||||||||    
T  48820518 gtcaataatac 48820508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 13703491 - 13703370
Alignment:
Q  76 tatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtt 175  Q
    |||||||| ||||||||| |||||||||  ||| || ||||||| ||||||| |   ||||||||||||||||||||||||||||||||||||||||  |    
T  13703491 tatactccatccgtttcataatacttgtccattctgaagaataaatttgttttacaatacttgtcactttcaagtttcaatgcaacattaattattgtgt 13703392  T
Q  176 tatcaataatactcttacatat 197  Q
    | |||||||||| ||| |||||    
T  13703391 tgtcaataatacccttgcatat 13703370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 199132 - 199013
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||| ||||| |||| ||||  ||||| || |||||||||||||||   || |||||| |||||||||||||||||||||||||||||| |||     
T  199132 tactccctccatttcataatagttgtccattttagaaaataattttgtttcacaatatttgtcattttcaagtttcaatgcaacattaattattgttttg 199033  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  199032 tcaataatacccttgcatat 199013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 52805057 - 52805142
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttac 193  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||| || |||||    
T  52805057 ttttggagaataattt-gttttattttacttgtcactttcaagtttcgatgcaacatttattattgatttatcaataacacccttac 52805142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 193
Target Start/End: Original strand, 53559648 - 53559726
Alignment:
Q  115 aataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttac 193  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||| ||||| ||||||||| ||||    
T  53559648 aataattttgtttcaatttacttgtcactctcaagtttcaatgcaacattaatcattgatttattaataatactgttac 53559726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 43750396 - 43750294
Alignment:
Q  95 aatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttaca 194  Q
    |||||||||  |||||  |||||||||| |||||    ||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| ||    
T  43750396 aatacttgtccattttttagaataatttggtttctcaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatactcttgca 43750297  T
Q  195 tat 197  Q
    |||    
T  43750296 tat 43750294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 1455186 - 1455257
Alignment:
Q  113 agaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataa 184  Q
    ||||||| ||||||| | |||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  1455186 agaataaatttgttttactttacttgtcactttccaatttcaatgcaacattaattattggtttgtcaataa 1455257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 19896935 - 19897038
Alignment:
Q  83 cctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaat 182  Q
    |||||||||||| |||| ||||  ||||| | ||||||||||||| | || |||| |  ||||||||||| ||| |||||||||||||||||||||||||    
T  19896935 cctccgtttcaccatacatgttgcttttgaaaaataattttgttttacttcacttctttctttcaagttttaatacaacattaattattggtttatcaat 19897034  T
Q  183 aata 186  Q
    ||||    
T  19897035 aata 19897038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 37293644 - 37293595
Alignment:
Q  119 attttgtttcattttacttgtcactttcaagtttcaatgcaacattaatt 168  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37293644 attttgtttcattttacttgtccctttcaagtttcaatgcaacattaatt 37293595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 52009051 - 52009158
Alignment:
Q  85 tccgtttcacaatacttgtttattttggagaataattttgttt------cattttacttgtcactttcaagtttcaatgcaacattaattattggtttat 178  Q
    |||||||||||||||||||   ||||||  |||||||||||||      ||| |||||||||||||||||||||| ||||||||||||||||||  || |    
T  52009051 tccgtttcacaatacttgtcgcttttgggaaataattttgtttaataatcatattacttgtcactttcaagtttcgatgcaacattaattattgtcttgt 52009150  T
Q  179 caataata 186  Q
    ||||||||    
T  52009151 caataata 52009158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 31873891 - 31873957
Alignment:
Q  106 attttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattg 172  Q
    ||||| |||||||||||| |||||   |||||||| |||||||||||||||||||||||||||||||    
T  31873891 attttagagaataattttatttcacaatacttgtccctttcaagtttcaatgcaacattaattattg 31873957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 48963390 - 48963288
Alignment:
Q  84 ctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    ||||| |||| | ||||| | |||||| |||||||||||| ||||||  || || ||| ||| ||||||||||||||||||||||||||  || ||||||    
T  48963390 ctccgattcatattacttatctattttagagaataattttatttcataatatttatcatttttaagtttcaatgcaacattaattattgtcttgtcaata 48963291  T
Q  184 ata 186  Q
    |||    
T  48963290 ata 48963288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 48151994 - 48152079
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    |||||||||| || ||||||||| ||||  ||||||||||||  |||||||||||||||| | ||| |||| ||||| ||| ||||    
T  48151994 ttttggagaaaaaatttgtttcaatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattaccctta 48152079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 48214076 - 48214161
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    |||||||||| || ||||||||| ||||  ||||||||||||  |||||||||||||||| | ||| |||| ||||| ||| ||||    
T  48214076 ttttggagaaaaaatttgtttcaatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattaccctta 48214161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 17755421 - 17755357
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattatt 171  Q
    ||||||||||||||||| ||| ||||||||||| | ||  |||||||||||||| | ||||||||    
T  17755421 ttttggagaataattttattttattttacttgttatttcaaagtttcaatgcaataataattatt 17755357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 19056741 - 19056677
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattatt 171  Q
    ||||||||||||||||| ||| ||||||||||| | ||  |||||||||||||| | ||||||||    
T  19056741 ttttggagaataattttattttattttacttgttatttcaaagtttcaatgcaataataattatt 19056677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 37781152 - 37781094
Alignment:
Q  139 tcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttacatat 197  Q
    |||||||||| ||||||| |||  |||||||||||||| |||||||||| |||| ||||    
T  37781152 tcactttcaaatttcaatccaaagttaattattggtttgtcaataatacccttaaatat 37781094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 13364840 - 13364881
Alignment:
Q  75 atatactccctccgtttcacaatacttgtttattttggagaa 116  Q
    ||||||||||||||||||| ||||| |||| |||||||||||    
T  13364840 atatactccctccgtttcaaaatacatgttcattttggagaa 13364881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 32980649 - 32980734
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    |||||||||||  |||||||||  ||||  ||||||||||||  |||||| ||||||||| || || |||||||||| ||| ||||    
T  32980649 ttttggagaatttttttgtttctatttaactgtcactttcaaaattcaatacaacattaaataatgttttatcaatattaccctta 32980734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 2154246 - 2154186
Alignment:
Q  137 tgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttacatat 197  Q
    ||||||||||||  |||||||||||||||| | |||  ||||||||| |||||||| ||||    
T  2154246 tgtcactttcaaagttcaatgcaacattaaatgttgtcttatcaatattactcttagatat 2154186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 34266675 - 34266599
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| | |||||||||  ||||  ||||| ||||||  |||||||||||||||| | ||| ||||||||||    
T  34266675 ttttggagaaaatttttgtttctatttaactgtcattttcaaagttcaatgcaacattaaatgttgttttatcaata 34266599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 43159967 - 43159907
Alignment:
Q  137 tgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttacatat 197  Q
    ||||||||||||  |||||||||||||||| | ||| |||||||||| ||| |||| ||||    
T  43159967 tgtcactttcaaaattcaatgcaacattaaatgttgatttatcaatattacccttaaatat 43159907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 3e-44; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 40756911 - 40757025
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  40756911 tactccctccgtttcataatacttgtccattttggagaataattttgtttcactttagttgtcactttcaagtttcaatgcaacattaattattggttta 40757010  T
Q  178 tcaataatactctta 192  Q
    |||||||||| ||||    
T  40757011 tcaataataccctta 40757025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 197
Target Start/End: Original strand, 22388135 - 22388257
Alignment:
Q  75 atatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggt 174  Q
    ||||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||      
T  22388135 atatactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtc 22388234  T
Q  175 ttatcaataatactcttacatat 197  Q
    || |||||||||| ||| |||||    
T  22388235 ttgtcaataatacccttgcatat 22388257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 107 - 186
Target Start/End: Complemental strand, 19976576 - 19976497
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataata 186  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19976576 ttttggaaaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattagtttatcaataata 19976497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 37284525 - 37284632
Alignment:
Q  84 ctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||||||||||| | | ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||| ||||||| ||    
T  37284525 ctccgtttcacaatactt-tctcttttggagaataattttgtttcactttacttgtcattttcaagtttcaatgcaacatt-attattgatttatcacta 37284622  T
Q  184 atactcttac 193  Q
    ||||||||||    
T  37284623 atactcttac 37284632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 23367067 - 23366947
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||||  ||    
T  23367067 atactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatacaacattaattattgtctt 23366968  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  23366967 gtcaataatacccttgcatat 23366947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 28110094 - 28110214
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||| |||||||||||||||| || |   |||||||||| ||  ||||||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  28110094 atacttcctccgtttcacaatatttatcgtttttggagaaaaaacttgtttcacattacttgtcattttcaagtttcaatgcaacattaattattggttt 28110193  T
Q  177 atcaataatactcttacatat 197  Q
    ||||||||||| |||||||||    
T  28110194 atcaataatacccttacatat 28110214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 32838928 - 32839035
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||| || | |||||||||| |||   ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  32838928 atactccatctgcttcacaatacatgtcgtttttgaagaataattttgtttcattttacttgtcactttcaagtttcaatgcaatattaattatttgttt 32839027  T
Q  177 atcaataa 184  Q
    ||||||||    
T  32839028 atcaataa 32839035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 3519185 - 3519065
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||| ||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||  ||    
T  3519185 atacttcctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgtaacattaattattgtctt 3519086  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  3519085 gtcaataatacccttgcatat 3519065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 81 - 193
Target Start/End: Complemental strand, 36447532 - 36447420
Alignment:
Q  81 tccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatca 180  Q
    ||||||||||||||||||| |||   |||| |||||||||||||||||| |||| | ||||||||||| |||||||||||  ||||||||||||||||||    
T  36447532 tccctccgtttcacaatacatgtcgcttttagagaataattttgtttcactttattcgtcactttcaaatttcaatgcaatgttaattattggtttatca 36447433  T
Q  181 ataatactcttac 193  Q
    ||||||| |||||    
T  36447432 ataatacacttac 36447420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 12969740 - 12969859
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||||||||   ||| |||| ||||||||||||||||||| |||||||||||  ||     
T  12969740 tactccctccgtttcataatacttgtccattttggagaataattttgtttcacaatacatgtctctttcaagtttcaatgcaatattaattattgtcttc 12969839  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| |||| ||||    
T  12969840 tcaataatacccttaaatat 12969859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 78 - 193
Target Start/End: Original strand, 39561895 - 39562005
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||||||||| |||   |||||||||||||||||||||||     ||||||||||| || |||||||||||||||||||||||||||     
T  39561895 tactccctccgtttcacaatacatgtcgtttttggagaataattttgtttca-----cttgtcacttttaaatttcaatgcaacattaattattggtttg 39561989  T
Q  178 tcaataatactcttac 193  Q
    |||||||||| |||||    
T  39561990 tcaataatacccttac 39562005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 1102779 - 1102659
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  ||||  ||||||||||||||||||   |||| |||||||||||||||||||||||||||||||||||  ||    
T  1102779 atactccctccgtttcataatacttgtccatttgagagaataattttgtttcacaatactcgtcactttcaagtttcaatgcaacattaattattgtctt 1102680  T
Q  177 atcaataatactcttacatat 197  Q
     ||||||| || ||| |||||    
T  1102679 gtcaataacacccttgcatat 1102659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 39938448 - 39938328
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||| | |||||||||  ||||| ||||||||||||||||||   ||||||||||||| |||||| |||||||||||||||||||  ||    
T  39938448 atactccctccgttttataatacttgtccattttagagaataattttgtttcacaatacttgtcacttttaagttttaatgcaacattaattattgtctt 39938349  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  39938348 gtcaataatacccttgcatat 39938328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 37673743 - 37673862
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||| ||||||||| |||||||||  ||||| |||||||| |||||||||   |||||||||||| |||||||||||||||||||||||||||  ||     
T  37673743 tactccttccgtttcataatacttgtccattttagagaataactttgtttcaaaatacttgtcacttccaagtttcaatgcaacattaattattgtcttg 37673842  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  37673843 tcaataatacccttgcatat 37673862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 1646564 - 1646445
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| ||||| |||  ||||| ||||||||||||||||||   ||||| |||||||||||||||||||||||||||| ||||   ||     
T  1646564 tactccctccgtttcataatacctgtccattttagagaataattttgtttcacaatacttatcactttcaagtttcaatgcaacattaagtattatcttg 1646465  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  1646464 tcaataatacccttgcatat 1646445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 14780023 - 14779964
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaa 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14780023 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaagattaa 14779964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 34242217 - 34242143
Alignment:
Q  112 gagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataata 186  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||| ||||| |||||||||||||||||||    
T  34242217 gagaataattttgtttcattttactggtcacttttaagttttaatgcaatattaaatattggtttatcaataata 34242143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 1002760 - 1002831
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttat 178  Q
    ||||||||||| ||||| ||| ||||||||||||| |||||| | |||||||||||||||||||||||||||    
T  1002760 ttttggagaattattttattttattttacttgtcattttcaaatctcaatgcaacattaattattggtttat 1002831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 4918031 - 4917933
Alignment:
Q  85 tccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||||||| ||||   ||||| | || ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||||| || ||||||    
T  4918031 tccgtttcacaatatttgtcatttttgaaaaacaattttgcttcacattacttgtcactttcgaattttaattcaacattaattattggcttgtcaata 4917933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 27900991 - 27901065
Alignment:
Q  119 attttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttac 193  Q
    ||||| ||||||||||||| ||||||||||||||| ||| || |||||| |||  ||| |||||||||| |||||    
T  27900991 attttatttcattttacttttcactttcaagtttcgatgtaatattaataattaatttgtcaataatacccttac 27901065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 479207 - 479131
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| ||||||||| |  ||||  ||||||||||||  |||||||||||||||| | ||| ||||||||||    
T  479207 ttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatcaata 479131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 15677525 - 15677449
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| ||||||||| |  ||||  ||||||||||||  |||||||||||||||| ||||  ||||||||||    
T  15677525 ttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatattattttatcaata 15677449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 187
Target Start/End: Original strand, 28401396 - 28401444
Alignment:
Q  139 tcactttcaagtttcaatgcaacattaattattggtttatcaataatac 187  Q
    ||||||||||||||||| || ||||||||||||| ||| ||||||||||    
T  28401396 tcactttcaagtttcaaggccacattaattattgatttgtcaataatac 28401444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 14541340 - 14541399
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaa 166  Q
    |||||||||| ||| |||||||| ||||  ||||||||||||  ||||||||||||||||    
T  14541340 ttttggagaaaaatattgtttcaatttaactgtcactttcaaagttcaatgcaacattaa 14541399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 13753964 - 13754049
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    |||||||||| | ||||||| || ||||  ||||||||||||  |||||| ||||||||| | ||| |||||||||| ||| ||||    
T  13753964 ttttggagaacatttttgttccaatttaactgtcactttcaaagttcaatacaacattaaatgttgttttatcaatattaccctta 13754049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 36375580 - 36375656
Alignment:
Q  107 ttttggagaataattttgtttc-attttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| ||||||||| | |||| ||| |||||||||||  |||||||||||||||| | ||| ||||||||||    
T  36375580 ttttggagaaaaattttgttcctatttgact-gtcactttcaaagttcaatgcaacattaaatgttgttttatcaata 36375656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 36917050 - 36917009
Alignment:
Q  151 ttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    |||||||||||||||||||| | ||||||||||||| |||||    
T  36917050 ttcaatgcaacattaattatagttttatcaataatagtctta 36917009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 10812208 - 10812284
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| ||||||||| |  ||||  ||||||||||||  |||||||||||||||| | ||| |||| |||||    
T  10812208 ttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaata 10812284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 11560281 - 11560205
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| | |||||||||  ||||  ||||||||||||  |||||||||||||||| | ||| |||| |||||    
T  11560281 ttttggagaaaatttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaata 11560205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 32901136 - 32901176
Alignment:
Q  151 ttcaatgcaacattaattattggtttatcaataatactctt 191  Q
    ||||||||||||||||||  || ||||||||||||||||||    
T  32901136 ttcaatgcaacattaattgatgatttatcaataatactctt 32901176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 34357187 - 34357263
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| || |||||| |  |||| |||||||||||||  |||||||||||||||| | ||| |||| |||||    
T  34357187 ttttggagaaaaaatttgttcctatttaattgtcactttcaaagttcaatgcaacattaaatgttgttttaccaata 34357263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 43077331 - 43077391
Alignment:
Q  137 tgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttacatat 197  Q
    ||||||||||||  |||||||||||||||| ||||| |||| ||||| ||| |||| ||||    
T  43077331 tgtcactttcaaagttcaatgcaacattaaatattgttttaccaatattacccttagatat 43077391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 44360443 - 44360519
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||||  |||||||||  ||||  ||||||||||||  |||||||||||||||| |  || ||||||||||    
T  44360443 ttttggagaatttttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgatgttttatcaata 44360519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 19692999 - 19692884
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||| ||||| ||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19692999 tactccatccgtatcacaatacttgtctattttagagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacattaattattggttta 19692900  T
Q  178 tcaataatactcttac 193  Q
    ||||||| || |||||    
T  19692899 tcaataacacccttac 19692884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 19703584 - 19703469
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||| ||||| ||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19703584 tactccatccgtatcacaatacttgtctattttagagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacattaattattggttta 19703485  T
Q  178 tcaataatactcttac 193  Q
    ||||||| || |||||    
T  19703484 tcaataacacccttac 19703469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 6128956 - 6129063
Alignment:
Q  85 tccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataa 184  Q
    ||||||||||||||| |||   ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6128956 tccgtttcacaatacatgtcgcttttgaagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataa 6129055  T
Q  185 tactctta 192  Q
    ||| ||||    
T  6129056 taccctta 6129063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 22321267 - 22321387
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||    
T  22321267 atactccctccgtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtctt 22321366  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  22321367 gtcaataatacccttgcatat 22321387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 197
Target Start/End: Complemental strand, 21310701 - 21310579
Alignment:
Q  75 atatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggt 174  Q
    ||||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||      
T  21310701 atatactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtc 21310602  T
Q  175 ttatcaataatactcttacatat 197  Q
    || |||||||||| ||| |||||    
T  21310601 ttgtcaataatacccttgcatat 21310579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 32543760 - 32543642
Alignment:
Q  74 aatatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattgg 173  Q
    |||||||||| || ||||||||||||||||   |||| |||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||    
T  32543760 aatatactccttctgtttcacaatacttgtcgcttttagagaataattttgtttcattttacttgttactttcaagttttaatgcgacattaattattgg 32543661  T
Q  174 tttatcaataatactctta 192  Q
    ||| ||| |||||| ||||    
T  32543660 tttgtcattaataccctta 32543642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 14261322 - 14261202
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   |||||||| |||||||||||||||||||||||||||||||  ||    
T  14261322 atactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtctt 14261223  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  14261222 gtcaataatacccttgcatat 14261202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 24706246 - 24706366
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   |||||||| |||||||||||||||||||||||||||||||  ||    
T  24706246 atactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtctt 24706345  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  24706346 gtcaataatacccttgcatat 24706366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 25704929 - 25704809
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   |||||||||||||||||||||| |||||||||||||||||  ||    
T  25704929 atactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcagtgcaacattaattattgtctt 25704830  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  25704829 gtcaataatacccttgcatat 25704809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 12071837 - 12071718
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  ||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||| |||  ||     
T  12071837 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattcttgtcttg 12071738  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  12071737 tcaataatacccttgcatat 12071718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 40122487 - 40122606
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    ||||| |||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||     
T  40122487 tactctctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 40122586  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  40122587 tcaataatacccttgcatat 40122606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 173
Target Start/End: Original strand, 50839031 - 50839126
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattgg 173  Q
    |||||||||| |||||||||||||||   |||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||    
T  50839031 tactccctccatttcacaatacttgtcgcttttggagaataattttgtttcacattacttgtcattttcaagtttcaatgcaacattaattattgg 50839126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 197
Target Start/End: Complemental strand, 21065037 - 21064919
Alignment:
Q  79 actccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttat 178  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||||||   ||||| || ||||||| |||||||||||||||||||||||  ||      
T  21065037 actccctccgtttcataatacttgttcattttagagaataattttgtttcacaatacttatcgctttcaaatttcaatgcaacattaattattgtcttga 21064938  T
Q  179 caataatactcttacatat 197  Q
    |||||||||||||||||||    
T  21064937 caataatactcttacatat 21064919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 20249013 - 20249133
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    |||||| |||||||||| |||||||||  ||||||||||||||||||||||||   ||| |||| ||||||||||||||||||| |||||||||||  ||    
T  20249013 atactcactccgtttcataatacttgtccattttggagaataattttgtttcacaatacctgtctctttcaagtttcaatgcaatattaattattgtctt 20249112  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| |||||||||    
T  20249113 gtcaataatacccttacatat 20249133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 44569115 - 44568995
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   |||||||| |||||| ||||||||||||||||||||||||  ||    
T  44569115 atactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcatgtttcaatgcaacattaattattgtctt 44569016  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  44569015 gtcaataatacccttgcatat 44568995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 50768129 - 50768020
Alignment:
Q  88 gtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatac 187  Q
    |||||| |||||||||  ||||| ||||||||||||||||||   || |||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  50768129 gtttcataatacttgtccattttagagaataattttgtttcacaatatttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 50768030  T
Q  188 tcttacatat 197  Q
     |||||||||    
T  50768029 ccttacatat 50768020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 197
Target Start/End: Original strand, 21661532 - 21661654
Alignment:
Q  75 atatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggt 174  Q
    |||| |||||||||||||| |||||||||  ||||| ||||||||||||||||||   || || |||||||||||||||||||||||||||| |||||      
T  21661532 atatgctccctccgtttcataatacttgtccattttagagaataattttgtttcacaatatttatcactttcaagtttcaatgcaacattaagtattgtc 21661631  T
Q  175 ttatcaataatactcttacatat 197  Q
    || |||||||||| ||| |||||    
T  21661632 ttgtcaataatacccttgcatat 21661654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 197
Target Start/End: Original strand, 21670296 - 21670418
Alignment:
Q  75 atatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggt 174  Q
    |||| |||||||||||||| |||||||||  ||||| ||||||||||||||||||   || || |||||||||||||||||||||||||||| |||||      
T  21670296 atatgctccctccgtttcataatacttgtccattttagagaataattttgtttcacaatatttatcactttcaagtttcaatgcaacattaagtattgtc 21670395  T
Q  175 ttatcaataatactcttacatat 197  Q
    || |||||||||| ||| |||||    
T  21670396 ttgtcaataatacccttgcatat 21670418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 193
Target Start/End: Original strand, 18507276 - 18507381
Alignment:
Q  88 gtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatac 187  Q
    ||||||||||||||||   |||| ||| ||||||||||||||  || ||||||||||||||||||||||||||||||||||||||  || |||||||||     
T  18507276 gtttcacaatacttgtcgcttttagagcataattttgtttcacatttcttgtcactttcaagtttcaatgcaacattaattattgacttgtcaataatat 18507375  T
Q  188 tcttac 193  Q
    ||||||    
T  18507376 tcttac 18507381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 48652472 - 48652386
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttac 193  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||| ||||| ||||||||||||| ||||| |||||||| |||||    
T  48652472 ttttggagaataattttgtttcactttacttgttactttaaagttttaatgcgacattaattattgatttattaataatacccttac 48652386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 186
Target Start/End: Complemental strand, 31892492 - 31892401
Alignment:
Q  95 aatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataata 186  Q
    ||||||||| ||| ||||||||||||||||||| |   ||||||||||||| |||||| |||| ||||||||||||||  || |||||||||    
T  31892492 aatacttgtctatcttggagaataattttgttttacaatacttgtcacttttaagttttaatgtaacattaattattgtcttgtcaataata 31892401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 51777841 - 51777771
Alignment:
Q  117 taattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatact 188  Q
    ||||||||||| | ||||||||||||||| |||||  | ||||||||||||||||||||| |||||||||||    
T  51777841 taattttgttttactttacttgtcacttttaagtta-agtgcaacattaattattggtttgtcaataatact 51777771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 26676645 - 26676694
Alignment:
Q  143 tttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  26676645 tttcaagttttaatgcaacaataattattgatttatcaataatactctta 26676694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 8735400 - 8735486
Alignment:
Q  106 attttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    ||||| ||||| |||||||||||  |||| |||||||||||||  |||||||||| ||||| ||||| |||| ||||| || |||||    
T  8735400 attttagagaaaaattttgtttctatttaattgtcactttcaaagttcaatgcaatattaaatattgttttaccaatattattctta 8735486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 26676577 - 26676645
Alignment:
Q  85 tccgtttcacaatacttgtt-tattttggagaataattttgtttcattttacttgtcactttcaagttt 152  Q
    ||||||||||||||||||   | ||||  ||||||||||||||| | ||||||||||||||||||||||    
T  26676577 tccgtttcacaatacttgccatttttttaagaataattttgttttactttacttgtcactttcaagttt 26676645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 39683946 - 39683870
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    ||||| |||| |||||||||||  ||||  ||||||||| ||  |||||||||||||||| ||||| ||||||||||    
T  39683946 ttttgtagaaaaattttgtttctatttaactgtcacttttaaagttcaatgcaacattaaatattgttttatcaata 39683870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 42629342 - 42629414
Alignment:
Q  120 ttttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    |||| ||||| |||| |||||||||||||  |||||||||||||||| | ||| |||||||||| ||| ||||    
T  42629342 ttttatttcaatttaattgtcactttcaaagttcaatgcaacattaaattttgttttatcaatattaccctta 42629414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 53600018 - 53599942
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| ||||||||| |  ||||  ||||||||||||  |||||||||||||||| ||||| |||| |||||    
T  53600018 ttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatattgttttaccaata 53599942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 56576335 - 56576259
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| ||||||||| |  ||||  ||||||||||||  |||||||||||||||| ||||| |||| |||||    
T  56576335 ttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatattgttttaccaata 56576259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 171
Target Start/End: Original strand, 20714322 - 20714413
Alignment:
Q  80 ctccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattatt 171  Q
    |||||| ||||||||||||  |||   |||| |||||||| ||| |||||| ||| || ||| ||| || ||||||||||||||||||||||    
T  20714322 ctccctacgtttcacaatatctgtcacttttagagaataaatttatttcatattatttatcatttttaaatttcaatgcaacattaattatt 20714413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 20714426 - 20714463
Alignment:
Q  155 atgcaacattaattattggtttatcaataatactctta 192  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  20714426 atgcaacattaattattggtttgtcaataataccctta 20714463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 3436299 - 3436223
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| ||||||||| |  ||||  ||||||||||||  |||||||||||||||| | ||| |||| |||||    
T  3436299 ttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaata 3436223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 26906591 - 26906551
Alignment:
Q  137 tgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    ||||||||||||| |||||||||||||||| ||||| ||||    
T  26906591 tgtcactttcaaggttcaatgcaacattaaatattgtttta 26906551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 38542508 - 38542432
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| ||||||||| |  ||||  ||||||||||||  |||| ||||||||||| ||||| |||| |||||    
T  38542508 ttttggagaaaaattttgttcctatttaaatgtcactttcaaaattcagtgcaacattaaatattgttttaccaata 38542432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 38617852 - 38617904
Alignment:
Q  131 tttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||| |||||||||||||  || ||||||||||||| ||||| ||||||||||    
T  38617852 tttaattgtcactttcaaagtttaatgcaacattaaatattgttttatcaata 38617904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 42513258 - 42513182
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| ||||||||| |  ||||  ||||||||||||  |||||||||||||||| | ||| |||| |||||    
T  42513258 ttttggagaaaaattttgttactatttaagtgtcactttcaaagttcaatgcaacattaaatgttgttttaccaata 42513182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 44069043 - 44069119
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    ||||| |||| ||||||||| |  ||||  ||||||||||||  |||||||||||||||| | ||| ||||||||||    
T  44069043 ttttgtagaaaaattttgttcctatttaagtgtcactttcaaagttcaatgcaacattaaatgttgttttatcaata 44069119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 50623430 - 50623502
Alignment:
Q  111 ggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||| || ||||||||  |||| |||||||||||||  |||||||||||||||| | ||| |||| |||||    
T  50623430 ggagaaaaaatttgtttctatttaattgtcactttcaaagttcaatgcaacattaaatgttgttttaccaata 50623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 8e-42; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 75 - 197
Target Start/End: Complemental strand, 17942723 - 17942601
Alignment:
Q  75 atatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggt 174  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||| |    
T  17942723 atatactccctccgtttcataatacttgtccattttggagaataattttgttttataatacttgtcactttcaagtttcaatgcaacattaattattgtt 17942624  T
Q  175 ttatcaataatactcttacatat 197  Q
    || |||||||||| |||||||||    
T  17942623 ttgtcaataatacccttacatat 17942601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 15064694 - 15064814
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||  ||    
T  15064694 atactccctccgtttcataatacttgtccattttggagaataattttgtttcataatacttgtcactttcaagtttcaatacaacattaattattgtctt 15064793  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  15064794 gtcaataatacccttgcatat 15064814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 8235904 - 8235783
Alignment:
Q  76 tatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtt 175  Q
    |||||| | ||||||||| ||||||||| |||||| ||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  |    
T  8235904 tatacttcatccgtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaatattaattattgtct 8235805  T
Q  176 tatcaataatactcttacatat 197  Q
    |||||||||||| |||||||||    
T  8235804 tatcaataatacccttacatat 8235783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 8626760 - 8626640
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   |||||||| |||||||||||||||||||||||||||||||  ||    
T  8626760 atactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtctt 8626661  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  8626660 gtcaataatacccttgcatat 8626640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 13757485 - 13757365
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||| ||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||    
T  13757485 atactccatccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtctt 13757386  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  13757385 gtcaataatacccttgcatat 13757365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 29260469 - 29260350
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||| ||||||||||||||||||||||||||| ||  ||     
T  29260469 tactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcattttcaagtttcaatgcaacattaattactgtcttg 29260370  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| |||||||||    
T  29260369 tcaataatacccttacatat 29260350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 1605856 - 1605736
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   |||||||||||||||| ||||||| |||||||||||||||  ||    
T  1605856 atactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtctt 1605757  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  1605756 gtcaataatacccttgcatat 1605736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 7761577 - 7761458
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  ||||| ||||||||||||||||||   || ||||||||||||||||||||||||| ||||||||||  |||     
T  7761577 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatatttgtcactttcaagtttcaatgcaatattaattattattttg 7761478  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  7761477 tcaataatacccttgcatat 7761458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 20398235 - 20398353
Alignment:
Q  75 atatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggt 174  Q
    ||||||||||| ||||||||||||| |||   ||||||| ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||       
T  20398235 atatactcccttcgtttcacaatacatgtcacttttggaaaataattttgtttcactttacttgccactttcaagttttaatgcaacattaattattaaa 20398334  T
Q  175 ttatcaataatactcttac 193  Q
    || |||||||||| |||||    
T  20398335 ttgtcaataatacccttac 20398353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 4129703 - 4129585
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  ||||| || |||||||||||||||   |||||||||||||||||||||||||||||||||| |||||  ||     
T  4129703 tactccctccgtttcataatacttgtccattttagaaaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaa-tattgtcttg 4129605  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  4129604 tcaataatacccttgcatat 4129585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 186
Target Start/End: Complemental strand, 1814873 - 1814762
Alignment:
Q  75 atatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggt 174  Q
    ||||||| ||| ||||||||||||| |||   ||||| ||||||||||| ||||| ||||||||||||||| || || |||||||||||| |||||||||    
T  1814873 atatacttccttcgtttcacaatacatgtcacttttgaagaataattttatttcactttacttgtcacttttaatttccaatgcaacattgattattggt 1814774  T
Q  175 ttatcaataata 186  Q
    || |||||||||    
T  1814773 ttgtcaataata 1814762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 3798339 - 3798261
Alignment:
Q  115 aataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttac 193  Q
    |||| |||||||||| |||||||||||||||||||||| |||||||||||||||||  ||||||||||||||| |||||    
T  3798339 aatagttttgtttcactttacttgtcactttcaagttttaatgcaacattaattatgagtttatcaataatacccttac 3798261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 187
Target Start/End: Complemental strand, 26861031 - 26860932
Alignment:
Q  88 gtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatac 187  Q
    |||||||||||| |||   ||||||||||||| ||||||||| ||||||||||| ||||| |||||||| ||||||| ||||||| ||| ||||||||||    
T  26861031 gtttcacaatacatgtcatttttggagaataagtttgtttcactttacttgtcattttcatgtttcaatacaacattgattattgatttgtcaataatac 26860932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 31559738 - 31559857
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| ||||||| |  ||||| |||||||||||| ||| |   ||||||| ||||||||||||||||||||||||||||||||  ||     
T  31559738 tactccctccgtttcataatacttctccattttagagaataattttattttacaatacttgttactttcaagtttcaatgcaacattaattattgtcttg 31559837  T
Q  178 tcaataatactcttacatat 197  Q
    | |||||||| ||| |||||    
T  31559838 ttaataatacccttgcatat 31559857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 30734483 - 30734602
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||| ||||| ||||| |||||||||  |||||||| ||||||||||||| |   || |||||| |||||| ||||||||||||||||||||||   |||    
T  30734483 tacttcctccttttcataatacttgtccattttggaaaataattttgttttacaatagttgtcattttcaaatttcaatgcaacattaattattatctta 30734582  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  30734583 tcaataatacccttgcatat 30734602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 847829 - 847895
Alignment:
Q  131 tttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttacatat 197  Q
    ||||||||||| ||||||  |||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  847829 tttacttgtcattttcaaagttcaatgcaacattaattattgctttgtcaataatactcttaaatat 847895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 31244951 - 31244891
Alignment:
Q  137 tgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttacatat 197  Q
    ||||||||||||  |||||||||||||||||| ||| |||||||||| || ||||| ||||    
T  31244951 tgtcactttcaaagttcaatgcaacattaattcttgttttatcaatattattcttagatat 31244891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 30236987 - 30237046
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaa 166  Q
    |||||||||| || ||||||||| ||||  ||||||||||||  ||||||||||||||||    
T  30236987 ttttggagaaaaaatttgtttcaatttaactgtcactttcaaaattcaatgcaacattaa 30237046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 3849074 - 3849159
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    |||||||||| ||||||||| |  ||||  ||||||||||||  |||||||||||||||| | ||| |||| ||||| || |||||    
T  3849074 ttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattattctta 3849159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 14287190 - 14287149
Alignment:
Q  152 tcaatgcaacattaattattggtttatcaataatactcttac 193  Q
    ||||||||||| ||||||||| |||||| |||||||||||||    
T  14287190 tcaatgcaacactaattattgatttatccataatactcttac 14287149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 24120734 - 24120645
Alignment:
Q  81 tccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattat 170  Q
    ||||||| ||||| || ||||||   |||||||||| | || |||||||  ||||||||||||||  ||||| ||||||||| |||||||    
T  24120734 tccctccatttcaaaaaacttgtcgtttttggagaaaatttgtgtttcacattacttgtcactttttagttttaatgcaacactaattat 24120645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 22050058 - 22050134
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||||  |||||||||  ||||  ||||||||||||  |||||||||||||||| |  || ||||||||||    
T  22050058 ttttggagaatttttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgatgttttatcaata 22050134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 24876831 - 24876723
Alignment:
Q  85 tccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataa 184  Q
    ||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||    
T  24876831 tccgtctcacaatacttgtcgtttttggagaataattttgtttcattttacttgtcactttcaagtgtcaatgcgacattaattattggtttgtcaataa 24876732  T
Q  185 tactcttac 193  Q
    |||||||||    
T  24876731 tactcttac 24876723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 75 - 197
Target Start/End: Complemental strand, 23526519 - 23526397
Alignment:
Q  75 atatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggt 174  Q
    ||||||||||||||||||| |||||||||  |||||| |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||      
T  23526519 atatactccctccgtttcataatacttgtccattttgaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtc 23526420  T
Q  175 ttatcaataatactcttacatat 197  Q
    || |||||||||| |||||||||    
T  23526419 ttgtcaataatacccttacatat 23526397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 284611 - 284491
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||    
T  284611 atactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgactt 284512  T
Q  177 atcaataatactcttacatat 197  Q
    ||||||||||| ||| |||||    
T  284511 atcaataatacccttgcatat 284491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 77 - 193
Target Start/End: Original strand, 51064753 - 51064869
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||| || ||||||||||||||||  ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||| ||||    
T  51064753 atactccgtctgtttcacaatacttgtccattttagagaataattttgtttcactttatttgtcactttcaagtttcaatgcaacgttaattattagttt 51064852  T
Q  177 atcaataatactcttac 193  Q
    ||||||||||| |||||    
T  51064853 atcaataatacccttac 51064869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 34458724 - 34458843
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||| ||||||||||||||  |||   ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  34458724 tactccttccgtttcacaatatatgtcgcttttggagaataattttgtttcactttacttgtcactttcaagtttcgatgcaacattaattattggttta 34458823  T
Q  178 tcaataatactcttacatat 197  Q
     | ||||||| |||||||||    
T  34458824 ccgataatacccttacatat 34458843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 40783656 - 40783776
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||    
T  40783656 atactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtctt 40783755  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  40783756 gtcaataatacccttgcatat 40783776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 40261293 - 40261404
Alignment:
Q  86 ccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataat 185  Q
    |||||||||||||  |||   ||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40261293 ccgtttcacaatatatgtcgcttttgaagaataattttgtttcacattacttgtcactttcaagtttcaatgcaacattaattattggtttgtcaataat 40261392  T
Q  186 actcttacatat 197  Q
    || |||||||||    
T  40261393 acccttacatat 40261404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 321903 - 321784
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  ||||| ||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||     
T  321903 tactccctccgtttcataatacttgtccattttagagaatatttttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 321804  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  321803 tcaataatacccttgcatat 321784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 23045279 - 23045398
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  ||||| ||||||||||||||||||   |||||||| |||||||||||||||||||||||||||||||  ||     
T  23045279 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttg 23045378  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  23045379 tcaataatacccttgcatat 23045398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 193
Target Start/End: Original strand, 31003787 - 31003902
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    ||||||||| |||||||||||||| |   |||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||| |||||||     
T  31003787 tactccctctgtttcacaatacttatcgcttttggagaataattttgtttcacattacttgccactttcaagtttcaatgcaacattaattgttggtttg 31003886  T
Q  178 tcaataatactcttac 193  Q
    || ||||||| |||||    
T  31003887 tccataatacccttac 31003902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 47037852 - 47037971
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| ||||||||| ||||||  ||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||  ||     
T  47037852 tactccctccgtttcataatacttgtctattttaaagaataattttgttttacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 47037951  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  47037952 tcaataatacccttgcatat 47037971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 46771910 - 46771796
Alignment:
Q  83 cctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaat 182  Q
    ||||||||||| |||||||||| |||||| |||||||||||||||||   ||||| ||||||||||||||||||| |||||||||||||   || |||||    
T  46771910 cctccgtttcataatacttgttcattttgaagaataattttgtttcacaatacttatcactttcaagtttcaatgtaacattaattattttcttgtcaat 46771811  T
Q  183 aatactcttacatat 197  Q
    |||||||||||||||    
T  46771810 aatactcttacatat 46771796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 78 - 185
Target Start/End: Complemental strand, 18396971 - 18396864
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||||| |  | | |||||||||||||||||||||||||||||||||||||  ||     
T  18396971 tactccctccatttcacaatacttgttgcttttggagaataattttgttttacataatttgtcactttcaagtttcaatgcaacattaattattgacttt 18396872  T
Q  178 tcaataat 185  Q
    ||||||||    
T  18396871 tcaataat 18396864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 24771905 - 24772014
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||| |||| ||||||||||||||||||| ||||||||||| |||    
T  24771905 atactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacatgtctctttcaagtttcaatgcaatattaattattgtttt 24772004  T
Q  177 atcaataata 186  Q
     |||||||||    
T  24772005 ttcaataata 24772014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 1837826 - 1837937
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcatt---ttacttgtcactttcaagtttcaatgcaacattaattattgg 173  Q
    ||||||| ||||||||| ||||| |||||  |||| ||||||||||||||||| |   |||||||||||||| ||||||||||||||||||||||||||     
T  1837826 atactccatccgtttcataatacatgttt--tttgaagaataattttgtttcaataatttacttgtcacttttaagtttcaatgcaacattaattattga 1837923  T
Q  174 tttatcaataatac 187  Q
    ||||||||||||||    
T  1837924 tttatcaataatac 1837937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 14925734 - 14925626
Alignment:
Q  83 cctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaat 182  Q
    |||||||||||||||||||||   |||| ||| |||||||||||||| ||||||||||  ||||||||||||||||||| |||  ||||||||| |||||    
T  14925734 cctccgtttcacaatacttgtcgtttttagagcataattttgtttcactttacttgtcgttttcaagtttcaatgcaacctta--tattggtttgtcaat 14925637  T
Q  183 aatactcttac 193  Q
    |||||||||||    
T  14925636 aatactcttac 14925626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 25929368 - 25929261
Alignment:
Q  85 tccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataa 184  Q
    |||||||||||||||||||   ||||  |||||||||||||||||||| ||||| | |||||||||||||| |||||||||| ||||| |||||||||||    
T  25929368 tccgtttcacaatacttgtcgcttttaaagaataattttgtttcatttcacttgcccctttcaagtttcaacgcaacattaaatattgatttatcaataa 25929269  T
Q  185 tactctta 192  Q
    ||| ||||    
T  25929268 taccctta 25929261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 40052501 - 40052572
Alignment:
Q  115 aataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataata 186  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40052501 aataattttgtttcacattacttgtcactttcaagtttcaatgcaacattaattattggtttgtcaataata 40052572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 192
Target Start/End: Original strand, 23166848 - 23166965
Alignment:
Q  75 atatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggt 174  Q
    ||||||||  |||||||||||||||| ||   |||| ||||||||||||||||||  ||| || | |||||||||||||||| ||||||||||||||| |    
T  23166848 atatactctatccgtttcacaatactcgtcgcttttagagaataattttgtttcacattatttattactttcaagtttcaatacaacattaattattgat 23166947  T
Q  175 ttatcaataatactctta 192  Q
    || |||||||||||||||    
T  23166948 ttgtcaataatactctta 23166965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 78 - 193
Target Start/End: Original strand, 27143014 - 27143127
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||| |||| |||| |||| ||||   |||||||||||||||||||||||  ||||||||||||  ||||||||||| |||||||||||||||||||     
T  27143014 tactccatccgcttcataataattgtcgcttttggagaataattttgtttcacattacttgtcact--caagtttcaatacaacattaattattggtttg 27143111  T
Q  178 tcaataatactcttac 193  Q
    |||||||||| |||||    
T  27143112 tcaataatacccttac 27143127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 197
Target Start/End: Original strand, 31061463 - 31061578
Alignment:
Q  85 tccgtttcacaatacttgtttattttggagaataattttgtttcattttact---tgtcactttcaagtttcaatgcaacattaattattggtttatcaa 181  Q
    |||||||||||||||||||   ||||||| ||||||||| |||||  |||||   ||||||| ||||||||||||||||||||||||||||||||  |||    
T  31061463 tccgtttcacaatacttgtcacttttggaaaataattttatttcacattactacttgtcactctcaagtttcaatgcaacattaattattggtttgacaa 31061562  T
Q  182 taatactcttacatat 197  Q
    |||||| || ||||||    
T  31061563 taataccctcacatat 31061578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 33083022 - 33082902
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||||||||  |||||  |||||||||||||||||   ||| |||| ||||||| ||||||||||| |||||||||||  ||    
T  33083022 atactccctccgtttcataatacttgtccattttaaagaataattttgtttcacaatacatgtctctttcaaatttcaatgcaatattaattattgtctt 33082923  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| |||| ||||    
T  33082922 ctcaataatacccttaaatat 33082902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 27210961 - 27211074
Alignment:
Q  84 ctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| |||| ||||  |||||  |||||||||||||||||   |||||||||| || ||||||||||||||||||||||||||  || ||||||    
T  27210961 ctccgtttcataatatttgtccatttttaagaataattttgtttcacaatacttgtcacatttaagtttcaatgcaacattaattattgtcttgtcaata 27211060  T
Q  184 atactcttacatat 197  Q
    |||| ||| |||||    
T  27211061 atacccttgcatat 27211074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 40562293 - 40562380
Alignment:
Q  85 tccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattg 172  Q
    ||||||| | |||||||||  |||||| ||||| ||||||||| |   ||||||||||||||||||||||||||||||||||||||||    
T  40562293 tccgttttataatacttgtccattttgaagaatgattttgttttacaatacttgtcactttcaagtttcaatgcaacattaattattg 40562380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 14350510 - 14350565
Alignment:
Q  114 gaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaatta 169  Q
    |||||||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  14350510 gaataattttgttttatattacttgtcactttaaagtttcaatgcaacattaatta 14350565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 3657282 - 3657236
Alignment:
Q  147 aagtttcaatgcaacattaattattggtttatcaataatactcttac 193  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  3657282 aagtttcaatgcaacattaattattggtttgtcaataatacttttac 3657236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 1749515 - 1749457
Alignment:
Q  114 gaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattg 172  Q
    ||||||||||||||||   ||||||| ||||| ||||||||||||||||||| ||||||    
T  1749515 gaataattttgtttcacaatacttgttacttttaagtttcaatgcaacattagttattg 1749457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 19455626 - 19455542
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    |||||||||| | |||||||||| |||| |||||||||||||  |||||||||||||||| | ||| |||| ||||| ||| ||||    
T  19455626 ttttggagaa-atttttgtttcaatttaattgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattaccctta 19455542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 32347987 - 32348072
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    |||||||||| |||||||||||| ||||  || |||||||||  |||||||||||||||| | ||| |||| ||||| ||| ||||    
T  32347987 ttttggagaaaaattttgtttcaatttaactgccactttcaaagttcaatgcaacattaaatgttgttttaccaatattaccctta 32348072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 19093277 - 19093341
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattatt 171  Q
    |||||||||| ||||||||| |  ||||| ||||||||||||  |||||||||||||||| ||||    
T  19093277 ttttggagaaaaattttgttcctatttacctgtcactttcaaagttcaatgcaacattaaatatt 19093341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 17581069 - 17581139
Alignment:
Q  115 aataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataat 185  Q
    ||||||||||||| | |||| |||||| |||||| ||||||| |||| |||||| || |||| ||||||||    
T  17581069 aataattttgttttactttatttgtcattttcaaatttcaatccaacgttaattttttgtttgtcaataat 17581139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 5597832 - 5597917
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    |||||||||||  |||||||||  ||||  |||||||| |||  |||||||||||||||| || || |||||||||| ||| ||||    
T  5597832 ttttggagaatttttttgtttctatttaactgtcacttccaaagttcaatgcaacattaaataatgttttatcaatattaccctta 5597917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 35531523 - 35531447
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| ||||||||| |  ||||  ||||||||||||  |||||||||||||||| | ||| |||| |||||    
T  35531523 ttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaata 35531447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 51613450 - 51613510
Alignment:
Q  137 tgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttacatat 197  Q
    ||||||||||||  ||||||||| |||||| | ||| |||||||||| |||||||| ||||    
T  51613450 tgtcactttcaaagttcaatgcatcattaaatgttgttttatcaatattactcttagatat 51613510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 197
Target Start/End: Complemental strand, 27814091 - 27813969
Alignment:
Q  75 atatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggt 174  Q
    ||||||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||      
T  27814091 atatactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtg 27813992  T
Q  175 ttatcaataatactcttacatat 197  Q
    || |||||||||| ||| |||||    
T  27813991 ttgtcaataatacccttgcatat 27813969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 47110728 - 47110608
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| ||||||| || ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||    
T  47110728 atactccctccgtttcataatacttattcattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtctt 47110629  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  47110628 gtcaataatacccttgcatat 47110608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 36453123 - 36453243
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    |||||| |||||||||| |||||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||    
T  36453123 atactctctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtctt 36453222  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  36453223 gtcaataatacccttgcatat 36453243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 16662370 - 16662255
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||| |||||||||||||||   ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||| |||     
T  16662370 tactccctccatttcacaatacttgtcacttttgaagaataattttgttttaaattacttgtcactttcaagtttcaatgcaacattaattattgatttg 16662271  T
Q  178 tcaataatactcttac 193  Q
    ||| |||||| |||||    
T  16662270 tcattaatacccttac 16662255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 17636730 - 17636615
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||| |||||||||||||||   ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||| |||     
T  17636730 tactccctccatttcacaatacttgtcacttttgaagaataattttgttttaaattacttgtcactttcaagtttcaatgcaacattaattattgatttg 17636631  T
Q  178 tcaataatactcttac 193  Q
    ||| |||||| |||||    
T  17636630 tcattaatacccttac 17636615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 25614352 - 25614472
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||||||||||||| |||| ||||  ||||| ||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||  ||    
T  25614352 atactccctccgtttcataataattgtccattttagagaataattttgtttcacaatacttgtcacttttaagtttcaatgcaacattaattattgtctt 25614451  T
Q  177 atcaataatactcttacatat 197  Q
     |||||||||| ||| |||||    
T  25614452 gtcaataatacccttgcatat 25614472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 10981785 - 10981666
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||| ||||| |||| ||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||     
T  10981785 tactccctccatttcataatatttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 10981686  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  10981685 tcaataatacccttgcatat 10981666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 40349240 - 40349120
Alignment:
Q  76 tatactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtt 175  Q
    |||||||||||||||||| |||||||||  ||||| ||||||||||| ||||||   ||||||||||||| |||||||||||||||||||||||||| ||    
T  40349240 tatactccctccgtttcataatacttgtccattttagagaataattt-gtttcacaatacttgtcacttttaagtttcaatgcaacattaattattgttt 40349142  T
Q  176 tatcaataatactcttacatat 197  Q
      |||||||||| ||| |||||    
T  40349141 ggtcaataatacccttgcatat 40349120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 3091755 - 3091671
Alignment:
Q  113 agaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttacatat 197  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  3091755 agaataattttgtttcactttacttgtcatttttaagtttcaatgcaacattaaatattggtttgtcaataatacccttacatat 3091671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 27941013 - 27941099
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttac 193  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||| || |||||||||| |||||    
T  27941013 ttttggagaacaattttgtttcacattacttgtcactttcaagtttcattgcaacattaattattggcttgtcaataatacccttac 27941099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 183
Target Start/End: Complemental strand, 16360654 - 16360549
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||| || ||||||||||| ||||   |||||||||||||||| | |||| |||||||||||||||||||||||||| ||||||||| |||||||||    
T  16360654 atactccttctgtttcacaatatttgtcgtttttggagaataattt-gcttcactttacttgtcactttcaagtttcaatacaacattaaatattggttt 16360556  T
Q  177 atcaata 183  Q
     ||||||    
T  16360555 gtcaata 16360549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 187
Target Start/End: Original strand, 24456794 - 24456874
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatac 187  Q
    ||||| ||||||||||||||| | ||||||||||||| |||||||||||||||||||||| || |  ||||||||||||||    
T  24456794 ttttgaagaataattttgtttaactttacttgtcactctcaagtttcaatgcaacattaactactaatttatcaataatac 24456874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 3498813 - 3498874
Alignment:
Q  136 ttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttacatat 197  Q
    ||||||| ||||| ||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  3498813 ttgtcacattcaactttcaatgcaaaattaattattgatttatcgataatactcttacatat 3498874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 7743427 - 7743509
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactc 189  Q
    ||||| ||||||||||| ||||| |||| |||||| ||| ||||||||||||||  ||||||||||| || ||| ||||||||    
T  7743427 ttttgaagaataattttatttcactttatttgtcatttttaagtttcaatgcaatgttaattattggattctcagtaatactc 7743509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 193
Target Start/End: Complemental strand, 8380210 - 8380100
Alignment:
Q  81 tccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatca 180  Q
    ||||||||||| ||||||| |||   |||||||||||||   ||||||| |||  |||||||||| |||||||||| |||||||| |||||||||| | |    
T  8380210 tccctccgttttacaatacatgtcgtttttggagaataa--ctgtttcactttttttgtcacttttaagtttcaatacaacattagttattggtttgtta 8380113  T
Q  181 ataatactcttac 193  Q
    | ||||| |||||    
T  8380112 aaaatacccttac 8380100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 35112438 - 35112523
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    |||||||||| |||||||||||| ||||  ||||||||||||  |||| ||||||||||| ||||| |||| ||||| ||| ||||    
T  35112438 ttttggagaaaaattttgtttcaatttaactgtcactttcaaagttcattgcaacattaaatattgttttaccaatattaccctta 35112523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 31399165 - 31399089
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| || |||||||| ||||| |||||||||||||  |||||||||||||||| | ||| |||| |||||    
T  31399165 ttttggagaaaaaatttgtttctttttaattgtcactttcaaagttcaatgcaacattaaatgttgttttaccaata 31399089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 37983366 - 37983300
Alignment:
Q  120 ttttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataata 186  Q
    |||| |||||||||| |||||||||| || | |||||| ||||||||||||| |||| |||||||||    
T  37983366 ttttatttcattttatttgtcacttttaaatatcaatgtaacattaattattagtttgtcaataata 37983300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 33257890 - 33257966
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| |||||||||||| ||||  | ||||||||||  |||||||||||||||| | ||| |||| |||||    
T  33257890 ttttggagaaaaattttgtttcaatttaactatcactttcaaagttcaatgcaacattaaatgttgttttaccaata 33257966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 28200542 - 28200488
Alignment:
Q  113 agaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaat 167  Q
    |||| |||||||||||| ||||||||||||||| |||||| ||| || |||||||    
T  28200542 agaacaattttgtttcactttacttgtcacttttaagttttaatacagcattaat 28200488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 6737294 - 6737258
Alignment:
Q  151 ttcaatgcaacattaattattggtttatcaataatac 187  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  6737294 ttcaatgcaatattaattattgttttatcaataatac 6737258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0939 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0939
Description:

Target: scaffold0939; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 1188 - 1110
Alignment:
Q  108 tttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataata 186  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||    
T  1188 tttggagaataattttgttttattttacttgtcatttttaagtttcgatgcaacattaattattggtttatcaataata 1110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 193
Target Start/End: Complemental strand, 7946 - 7830
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    ||||||| || ||||||||||||||||   ||||  |||||||||||  ||||  ||||||||||||||||||||| ||||||||||||||||| |||||    
T  7946 atactccatctgtttcacaatacttgtcgtttttaaagaataattttaattcacattacttgtcactttcaagttttaatgcaacattaattatcggttt 7847  T
Q  177 atcaataatactcttac 193  Q
     ||||||||||||||||    
T  7846 gtcaataatactcttac 7830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 438 - 320
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  ||||| || |||||||||||||||   |||||||||||||||||||||||||||||||||| |||||  ||     
T  438 tactccctccgtttcataatacttgtccattttagaaaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaa-tattgtcttg 340  T
Q  178 tcaataatactcttacatat 197  Q
    |||||||||| ||| |||||    
T  339 tcaataatacccttgcatat 320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 78 - 186
Target Start/End: Complemental strand, 45730 - 45622
Alignment:
Q  78 tactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 177  Q
    |||||||||||||||| |||||||||  ||||| ||||||||||||||||||   ||| |||| ||||||| ||||||||||| |||||||||||  |||    
T  45730 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacatgtctctttcaaatttcaatgcaatattaattattgtatta 45631  T
Q  178 tcaataata 186  Q
    |||||||||    
T  45630 tcaataata 45622  T

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Target: scaffold0025 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 192
Target Start/End: Original strand, 65199 - 65279
Alignment:
Q  112 gagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    ||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||||||||| |||||||||| ||||    
T  65199 gagaataattttgtttcatattacttgtcacttttaaatttcaatgcaatattaattattggtttgtcaataataccctta 65279  T

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Target: scaffold0343 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 88 - 193
Target Start/End: Original strand, 6911 - 7015
Alignment:
Q  88 gtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatac 187  Q
    ||||||||||||||||   |||||||||||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||   | ||||||||||    
T  6911 gtttcacaatacttgtcgtttttggagaataattttgtttcatattatttgtc-cgtttaagtttcaatgcaacattaattattgacgtgtcaataatac 7009  T
Q  188 tcttac 193  Q
    ||||||    
T  7010 tcttac 7015  T

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Target: scaffold0076 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 193
Target Start/End: Original strand, 15322 - 15438
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttt 176  Q
    |||||| ||| ||||||||||| ||| | ||||| | ||| ||| |||||||| ||||| ||| ||||| |||||||||||||||||||||||| |||||    
T  15322 atactcactctgtttcacaatatttgataattttagtgaacaatattgtttcactttacatgtaacttttaagtttcaatgcaacattaattatcggttt 15421  T
Q  177 atcaataatactcttac 193  Q
     |||||||||| |||||    
T  15422 gtcaataatacgcttac 15438  T

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Target: scaffold0056 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 88 - 193
Target Start/End: Complemental strand, 71350 - 71245
Alignment:
Q  88 gtttcacaatacttgtttattttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatac 187  Q
    ||||||||||||||||   ||||| ||||||||||| |||||  |||||||||||||| |||||| ||||||| ||||||||||||||| | ||| ||||    
T  71350 gtttcacaatacttgtcgtttttgaagaataattttatttcacattacttgtcacttttaagtttgaatgcaaaattaattattggtttgttaattatac 71251  T
Q  188 tcttac 193  Q
     |||||    
T  71250 ccttac 71245  T

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Target: scaffold0062 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 295 - 375
Alignment:
Q  106 attttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataata 186  Q
    ||||| ||||||||||||||||||   ||||||||||||| || ||| |||||||||||||||||||  || |||||||||    
T  295 attttagagaataattttgtttcacaatacttgtcacttttaaattttaatgcaacattaattattgtcttgtcaataata 375  T

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Target: scaffold0060 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 193
Target Start/End: Complemental strand, 11025 - 10904
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataatttt-----gtttcattttacttgtcactttcaagtttcaatgcaacattaattatt 171  Q
    ||||||||| | ||||||||||||||||  ||||||||||| |||||     ||| |  |||||||||||| || ||||||  |||||||||||| ||||    
T  11025 atactcccttcatttcacaatacttgttgcttttggagaattattttaatttgttccgctttacttgtcacatttaagtttatatgcaacattaaatatt 10926  T
Q  172 ggtttatcaataatactcttac 193  Q
    | ||| ||||||||| ||||||    
T  10925 gatttgtcaataatattcttac 10904  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 419700 - 419639
Alignment:
Q  131 tttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactctta 192  Q
    |||| |||||||||||||  ||||||||||| |||| | ||| |||||||||| ||||||||    
T  419700 tttatttgtcactttcaaaattcaatgcaactttaaatgttgttttatcaatattactctta 419639  T

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Target: scaffold0172 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 26359 - 26283
Alignment:
Q  107 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 183  Q
    |||||||||| || ||||||||  |||| |||||||||| ||  |||||||||||||||| | ||| |||| |||||    
T  26359 ttttggagaaaaaatttgtttctatttaattgtcacttttaaagttcaatgcaacattaaatgttgttttaccaata 26283  T

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Target: scaffold0129 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 19007 - 19059
Alignment:
Q  77 atactccctccgtttcacaatacttgtttattttggagaataattttgtttca 129  Q
    |||||| |||| ||| |||||||||||   |||||||||||||||||||||||    
T  19007 atactctctcctttttacaatacttgtcgtttttggagaataattttgtttca 19059  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 147330 - 147270
Alignment:
Q  137 tgtcactttcaagtttcaatgcaacattaattattggtttatcaataatactcttacatat 197  Q
    ||||||||||||  |||||||||||||||| | ||| |||||||||| ||| |||| ||||    
T  147330 tgtcactttcaaagttcaatgcaacattaaatgttgttttatcaatattacccttagatat 147270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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