View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14394_high_20 (Length: 239)

Name: NF14394_high_20
Description: NF14394
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14394_high_20
NF14394_high_20
[»] chr3 (42 HSPs)
chr3 (118-239)||(49989335-49989456)
chr3 (1-73)||(41998220-41998292)
chr3 (1-63)||(2051296-2051358)
chr3 (1-61)||(49951549-49951609)
chr3 (1-63)||(38535310-38535372)
chr3 (1-61)||(44676955-44677015)
chr3 (1-61)||(51473339-51473399)
chr3 (1-63)||(14654200-14654262)
chr3 (1-63)||(16701275-16701337)
chr3 (1-63)||(43678296-43678358)
chr3 (1-63)||(49720844-49720906)
chr3 (1-62)||(32730872-32730933)
chr3 (13-69)||(47431691-47431747)
chr3 (1-63)||(51828441-51828503)
chr3 (1-63)||(51829023-51829085)
chr3 (77-122)||(49990775-49990820)
chr3 (1-61)||(22370599-22370659)
chr3 (1-60)||(329850-329909)
chr3 (1-60)||(55389609-55389668)
chr3 (1-63)||(330319-330381)
chr3 (1-63)||(34104639-34104701)
chr3 (1-63)||(40275094-40275156)
chr3 (1-63)||(41998711-41998773)
chr3 (1-63)||(50662895-50662957)
chr3 (1-63)||(52375814-52375876)
chr3 (1-62)||(30513724-30513785)
chr3 (1-62)||(52237300-52237361)
chr3 (11-63)||(37075687-37075739)
chr3 (1-63)||(46013906-46013968)
chr3 (1-63)||(51827958-51828020)
chr3 (1-63)||(55390080-55390142)
chr3 (1-61)||(16689361-16689421)
chr3 (1-63)||(25534891-25534953)
chr3 (1-63)||(40275577-40275638)
chr3 (13-63)||(49407797-49407847)
chr3 (1-63)||(49720372-49720434)
chr3 (13-63)||(51828540-51828590)
chr3 (14-63)||(27200187-27200236)
chr3 (13-62)||(36701591-36701640)
chr3 (19-63)||(14654690-14654734)
chr3 (13-61)||(40838655-40838703)
chr3 (13-61)||(40839147-40839195)
[»] chr7 (25 HSPs)
chr7 (1-63)||(15712366-15712428)
chr7 (1-62)||(9181534-9181595)
chr7 (1-61)||(25637681-25637741)
chr7 (1-63)||(7732970-7733032)
chr7 (1-63)||(16917714-16917776)
chr7 (1-63)||(48248075-48248137)
chr7 (1-62)||(27245687-27245748)
chr7 (1-63)||(11971335-11971397)
chr7 (1-61)||(5745642-5745702)
chr7 (4-63)||(28687594-28687653)
chr7 (1-61)||(14311770-14311830)
chr7 (2-57)||(35160660-35160715)
chr7 (1-63)||(786783-786845)
chr7 (1-63)||(16081300-16081362)
chr7 (4-61)||(26026804-26026861)
chr7 (1-61)||(26047960-26048020)
chr7 (11-63)||(34595265-34595317)
chr7 (1-63)||(27245204-27245266)
chr7 (1-62)||(5334302-5334363)
chr7 (13-68)||(5333876-5333931)
chr7 (1-68)||(39388751-39388818)
chr7 (1-63)||(48247588-48247650)
chr7 (3-64)||(9394215-9394275)
chr7 (16-61)||(40669706-40669751)
chr7 (1-61)||(787269-787329)
[»] chr4 (33 HSPs)
chr4 (1-63)||(14440311-14440373)
chr4 (1-63)||(21034236-21034298)
chr4 (1-63)||(28465564-28465626)
chr4 (1-63)||(34789383-34789445)
chr4 (1-68)||(24851312-24851379)
chr4 (3-61)||(35643558-35643616)
chr4 (1-63)||(56077807-56077869)
chr4 (1-62)||(54441052-54441113)
chr4 (1-61)||(41114160-41114220)
chr4 (1-63)||(12593025-12593087)
chr4 (1-63)||(26974284-26974346)
chr4 (1-63)||(36168814-36168876)
chr4 (1-63)||(41608898-41608960)
chr4 (1-61)||(28166007-28166067)
chr4 (1-61)||(45839033-45839092)
chr4 (1-62)||(1397597-1397658)
chr4 (1-61)||(16214978-16215038)
chr4 (1-63)||(19529177-19529239)
chr4 (1-63)||(21034720-21034782)
chr4 (3-61)||(33777635-33777693)
chr4 (1-63)||(46736656-46736718)
chr4 (1-63)||(46737138-46737200)
chr4 (1-62)||(28465083-28465144)
chr4 (1-62)||(34789866-34789927)
chr4 (1-62)||(54440573-54440634)
chr4 (13-61)||(229654-229702)
chr4 (1-61)||(6616675-6616735)
chr4 (1-68)||(19528865-19528932)
chr4 (13-63)||(12593518-12593568)
chr4 (1-63)||(33689830-33689892)
chr4 (1-63)||(55677441-55677503)
chr4 (1-62)||(44219377-44219438)
chr4 (1-61)||(14439831-14439891)
[»] chr2 (33 HSPs)
chr2 (1-63)||(33921095-33921157)
chr2 (1-63)||(38008434-38008496)
chr2 (1-63)||(5560052-5560114)
chr2 (1-63)||(11539638-11539700)
chr2 (1-63)||(20127737-20127799)
chr2 (1-63)||(4809362-4809424)
chr2 (1-63)||(43160494-43160556)
chr2 (1-62)||(649820-649881)
chr2 (2-61)||(9329915-9329974)
chr2 (1-63)||(4356239-4356301)
chr2 (1-63)||(6949452-6949514)
chr2 (1-63)||(16952936-16952998)
chr2 (1-63)||(17060907-17060969)
chr2 (3-63)||(62958-63018)
chr2 (1-61)||(13315496-13315556)
chr2 (1-63)||(42192241-42192303)
chr2 (1-63)||(42192726-42192788)
chr2 (1-61)||(15551158-15551218)
chr2 (1-68)||(11540121-11540188)
chr2 (1-63)||(649528-649590)
chr2 (13-63)||(14942341-14942391)
chr2 (1-63)||(24140157-24140219)
chr2 (1-63)||(38007951-38008013)
chr2 (1-63)||(44219645-44219707)
chr2 (1-63)||(44220128-44220190)
chr2 (10-63)||(6949936-6949989)
chr2 (10-63)||(25336092-25336145)
chr2 (13-63)||(13399914-13399964)
chr2 (1-63)||(16953417-16953479)
chr2 (1-63)||(20128220-20128282)
chr2 (13-63)||(31797272-31797322)
chr2 (10-63)||(32418160-32418213)
chr2 (11-63)||(28143522-28143574)
[»] chr8 (21 HSPs)
chr8 (1-61)||(18428245-18428305)
chr8 (1-68)||(599981-600048)
chr8 (1-63)||(5730818-5730880)
chr8 (1-63)||(15256314-15256376)
chr8 (1-63)||(41260272-41260334)
chr8 (1-61)||(9797210-9797270)
chr8 (1-59)||(18049595-18049653)
chr8 (1-63)||(34799080-34799142)
chr8 (1-62)||(2208716-2208777)
chr8 (1-62)||(28254427-28254488)
chr8 (3-63)||(16578581-16578641)
chr8 (11-61)||(35426845-35426895)
chr8 (1-63)||(15255854-15255916)
chr8 (1-63)||(28254909-28254971)
chr8 (1-63)||(35427295-35427357)
chr8 (1-63)||(42035773-42035835)
chr8 (1-61)||(35694361-35694421)
chr8 (14-61)||(28877385-28877432)
chr8 (1-63)||(9796727-9796789)
chr8 (1-63)||(34799566-34799628)
chr8 (16-65)||(35693867-35693916)
[»] chr5 (18 HSPs)
chr5 (1-63)||(8419103-8419165)
chr5 (1-63)||(28290127-28290189)
chr5 (1-63)||(18149734-18149796)
chr5 (1-61)||(14340401-14340461)
chr5 (1-68)||(15029792-15029859)
chr5 (1-63)||(19291357-19291419)
chr5 (1-63)||(15115575-15115637)
chr5 (1-63)||(32697709-32697771)
chr5 (1-62)||(39083361-39083421)
chr5 (11-63)||(41834552-41834604)
chr5 (1-60)||(38900648-38900707)
chr5 (13-63)||(4967266-4967316)
chr5 (13-79)||(10721771-10721837)
chr5 (13-63)||(27307062-27307112)
chr5 (1-63)||(38901123-38901185)
chr5 (17-61)||(4966819-4966863)
chr5 (14-62)||(16753066-16753114)
chr5 (1-61)||(21370689-21370749)
[»] chr1 (26 HSPs)
chr1 (1-63)||(37505068-37505130)
chr1 (1-62)||(34555865-34555926)
chr1 (2-61)||(37421429-37421488)
chr1 (1-63)||(10279030-10279092)
chr1 (1-61)||(21938566-21938626)
chr1 (1-63)||(9992155-9992218)
chr1 (1-61)||(50305268-50305328)
chr1 (1-63)||(9992638-9992700)
chr1 (1-61)||(29439405-29439465)
chr1 (3-63)||(30787283-30787343)
chr1 (1-61)||(45048158-45048218)
chr1 (3-62)||(44582544-44582603)
chr1 (1-63)||(16299164-16299226)
chr1 (1-63)||(23340184-23340246)
chr1 (1-63)||(29438931-29438993)
chr1 (1-62)||(44582059-44582120)
chr1 (13-62)||(50304441-50304490)
chr1 (13-61)||(17641864-17641912)
chr1 (1-65)||(44954709-44954773)
chr1 (12-63)||(50926735-50926786)
chr1 (1-63)||(2868191-2868253)
chr1 (11-65)||(23526657-23526711)
chr1 (1-62)||(2867913-2867974)
chr1 (1-62)||(10278550-10278611)
chr1 (13-61)||(37421163-37421211)
chr1 (1-61)||(44954229-44954289)
[»] scaffold0097 (2 HSPs)
scaffold0097 (9-63)||(46759-46813)
scaffold0097 (1-63)||(46267-46329)
[»] chr6 (12 HSPs)
chr6 (1-63)||(25472496-25472558)
chr6 (1-61)||(24640668-24640728)
chr6 (1-63)||(5114469-5114531)
chr6 (2-63)||(31573721-31573782)
chr6 (11-63)||(29891577-29891629)
chr6 (1-63)||(30251175-30251237)
chr6 (1-63)||(31073144-31073206)
chr6 (11-63)||(22534217-22534269)
chr6 (1-61)||(25468852-25468912)
chr6 (10-63)||(30250722-30250775)
chr6 (19-63)||(5120970-5121014)
chr6 (19-63)||(31574226-31574270)
[»] scaffold0712 (1 HSPs)
scaffold0712 (1-63)||(6393-6455)
[»] scaffold0709 (1 HSPs)
scaffold0709 (1-63)||(6411-6473)
[»] scaffold0007 (2 HSPs)
scaffold0007 (11-63)||(210830-210882)
scaffold0007 (11-62)||(205860-205911)


Alignment Details
Target: chr3 (Bit Score: 114; Significance: 6e-58; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 49989456 - 49989335
Alignment:
Q  118 caagtaattggggtttttaaaatatctttcttaggctactagaggttgcaaaatagttgaattccttgaagcacttgcaaagaatataaagtagtaggta 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  49989456 caagtaattggggtttttaaaatatctttcttaggctactagaggttgcaaaatagttgaattccttgaagcacttgcaaagtatataaagtagtaggta 49989357  T
Q  218 aaagcattgaagcatattttct 239  Q
    ||||||||||| ||||||||||    
T  49989356 aaagcattgaaacatattttct 49989335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 41998292 - 41998220
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagcttattctaaa 73  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| |||||||||    
T  41998292 taaaaaagataggaccattttcgcgagttggtcaaaatggtaggaccaaaagtgtaattaagcctattctaaa 41998220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 2051358 - 2051296
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  2051358 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 2051296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 49951609 - 49951549
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  49951609 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 49951549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38535372 - 38535310
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  38535372 taaaaaagataggaccattttcctgagttggtcaaaatggtaggaccaaaagtgtaattaagc 38535310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44676955 - 44677015
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  44676955 taaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 44677015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 51473339 - 51473399
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||    
T  51473339 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 51473399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 14654262 - 14654200
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||||    
T  14654262 taaaaaagataggaccattttcgtgagttggtcaaaatggtagtatcaaaagtgtaattaagc 14654200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16701275 - 16701337
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||| |||||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  16701275 taaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaagc 16701337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 43678358 - 43678296
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||| |||||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  43678358 taaaaaagatatgaccatgttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 43678296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 49720844 - 49720906
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  49720844 taaaaaagatatgaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 49720906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32730872 - 32730933
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    |||||||||||||||||||||| | ||||||| ||||||||| |||||||||||||||||||    
T  32730872 taaaaaagataggaccattttcttgagttggttaaaatggtatgaccaaaagtgtaattaag 32730933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 47431747 - 47431691
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagcttattc 69  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||    
T  47431747 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcctattc 47431691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 51828441 - 51828503
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||| ||| |||||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  51828441 taaaaaatatatgaccattttcgtgagttggtcaaagtggtaggaccaaaagtgtaattaagc 51828503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 51829023 - 51829085
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||| |||||||||||| ||||| ||||||| ||| ||||||||||||||||||||    
T  51829023 taaaaaagatacgaccattttcgtgagttgatcaaaatagtatgaccaaaagtgtaattaagc 51829085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 49990820 - 49990775
Alignment:
Q  77 agagttatttcgtgccagattgattgattgattctacggatcaagt 122  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  49990820 agagttatttcgtgccagattgattgattgattctacagatcaagt 49990775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22370659 - 22370599
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||| ||||||||||||||| ||||||||||||||  | ||||||||||||||||||    
T  22370659 taaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 22370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 329909 - 329850
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaatta 60  Q
    |||||||| ||||||||||||||| ||||||||||||||| |  ||||||||||||||||    
T  329909 taaaaaagttaggaccattttcgtgagttggtcaaaatggaagaaccaaaagtgtaatta 329850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 55389668 - 55389609
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaatta 60  Q
    |||||||| ||||||||||||||| |||||||| |||||| | |||||||||||||||||    
T  55389668 taaaaaaggtaggaccattttcgtgagttggtcgaaatgggaggaccaaaagtgtaatta 55389609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 330319 - 330381
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||| ||||||||||||||| ||||||||||||||  | ||||||| ||||||||||||    
T  330319 taaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaatgtgtaattaagc 330381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34104701 - 34104639
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||| ||||||||||| |||||||||||||||||  || ||||||||||| ||||    
T  34104701 taaaaaagatagaaccattttcgtgagttggtcaaaatggtagaacaaaaagtgtaatgaagc 34104639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40275156 - 40275094
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || ||||||||||||||| ||||||||||||||  | ||||||||||||||||||||    
T  40275156 taaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 40275094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 41998711 - 41998773
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| |||||||||||||||||||||  | ||||||||||||||||||||    
T  41998711 taaaagaggtaggaccaatttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaagc 41998773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 50662895 - 50662957
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||| ||| |||||||| |||| |||||||||||| |||||||||| |||||||||    
T  50662895 taaaaaagatatgactattttcgtgagtttgtcaaaatggtaggaccaaaagtataattaagc 50662957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 52375814 - 52375876
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || ||||||||||||||| ||||||||||||||  | ||||||||||||||||||||    
T  52375814 taaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagc 52375876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30513785 - 30513724
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    |||||||||||||||||||||||| |||| |||||||||  | |||||||| ||||||||||    
T  30513785 taaaaaagataggaccattttcgtgagtttgtcaaaatgcaaggaccaaaaatgtaattaag 30513724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 52237300 - 52237361
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    ||||| || ||||||||||||||| ||||||||||||||  | |||||||||||||||||||    
T  52237300 taaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaag 52237361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 37075739 - 37075687
Alignment:
Q  11 aggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||| ||||||||||||||   |||||||||||||||||||||    
T  37075739 aggaccattttcgtgagttggtcaaaatgcggagaccaaaagtgtaattaagc 37075687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 46013906 - 46013968
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||| |||||||| |  |||||||||||||| ||  |||||||||||||||||||    
T  46013906 taaaaaagatagaaccatttttgggagttggtcaaaatgatagtaccaaaagtgtaattaagc 46013968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 51828020 - 51827958
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| |||||| ||||||||||||||  | ||||||||||||||||||||    
T  51828020 taaaagagctaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 51827958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 55390080 - 55390142
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||| ||||||||||||||| | ||||| ||||||  | ||||||||||||||||||||    
T  55390080 taaaaaaggtaggaccattttcgtgaattggttaaaatgcgaggaccaaaagtgtaattaagc 55390142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16689421 - 16689361
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||| || |||||||| |||||| |||||||||||||| || |||||||| |||||||||    
T  16689421 taaaagaggtaggaccaatttcgtgagttggtcaaaatgctaggaccaaaactgtaattaa 16689361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25534953 - 25534891
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || ||||||||||||| | | ||||||||||||  | ||||||||||||||||||||    
T  25534953 taaaagaggtaggaccattttcatgaattggtcaaaatgcgaggaccaaaagtgtaattaagc 25534891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 40275577 - 40275638
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || ||||||||||| ||| ||||||||||||||  | ||||||||||||||||||||    
T  40275577 taaaagaggtaggaccattt-cgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 40275638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 49407847 - 49407797
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||| || |||||||||||  | ||||||||||||||||||||    
T  49407847 gaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagc 49407797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 49720434 - 49720372
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| |||||| ||||||||||||||  | || |||||||||||||||||    
T  49720434 taaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagc 49720372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 51828590 - 51828540
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| |||||||| ||||||||||||  | ||||||||||||||||||||    
T  51828590 gaccaatttcgtaatttggtcaaaatgcaaggaccaaaagtgtaattaagc 51828540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 27200187 - 27200236
Alignment:
Q  14 accattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||| || |||||||||||  | ||||||||||||||||||||    
T  27200187 accattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagc 27200236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 36701591 - 36701640
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    |||||||||||| || |||||||||||  | |||||||||||||||||||    
T  36701591 gaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaag 36701640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 14654690 - 14654734
Alignment:
Q  19 tttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||| ||||||||||||||  | ||||||||||||||||||||    
T  14654690 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 14654734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 40838703 - 40838655
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||| ||||||||||||||  | || |||||||||||||||    
T  40838703 gaccattttcgtgagttggtcaaaatgcgaggatcaaaagtgtaattaa 40838655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 40839147 - 40839195
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||| |||| |||||||||  | ||||||||||||||||||    
T  40839147 gaccattttcgtgagtttgtcaaaatgtgaggaccaaaagtgtaattaa 40839195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 15712428 - 15712366
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  15712428 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 15712366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9181595 - 9181534
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  9181595 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 9181534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25637681 - 25637741
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  25637681 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 25637741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 7732970 - 7733032
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  7732970 taaaaaagataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 7733032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16917776 - 16917714
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  16917776 taaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 16917714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 48248075 - 48248137
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||    
T  48248075 taaaaaagataggaccatttttgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 48248137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27245687 - 27245748
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||    
T  27245687 taaaaaagataggaccattttcgtgagttgatcaaaatggtaagaccaaaagtataattaag 27245748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 11971397 - 11971335
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||||| ||| ||||||||||||| |||||||||| |||||||||    
T  11971397 taaaaaagataggaccattttcgtgagtaggtcaaaatggtaggaccaaaagtataattaagc 11971335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5745702 - 5745642
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||||||||| |||||||||||| |||||||||||||| || ||||||||||||||||||    
T  5745702 taaaaaagatatgaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 5745642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 28687653 - 28687594
Alignment:
Q  4 aaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  28687653 aaaagatagaaccattttcgtgagttggtcaaaatgatatgaccaaaagtgtaattaagc 28687594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14311770 - 14311830
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||||||||||||||||||| || ||||||||||| ||||| ||| ||||||||||||||    
T  14311770 taaaaaagataggaccatttttgtgagttggtcaaattggtacgacaaaaagtgtaattaa 14311830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 35160715 - 35160660
Alignment:
Q  2 aaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaa 57  Q
    |||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||    
T  35160715 aaaaaaaatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaa 35160660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 786845 - 786783
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||| || |||||||||||| ||||||||||||||| | || |||||||||||||||||    
T  786845 taaaaaaggtatgaccattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaagc 786783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16081362 - 16081300
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||| | | ||||||||||||| | | ||||||||||||||||||||    
T  16081362 taaaaaagataggaccatttccatgagttggtcaaaatagaaggaccaaaagtgtaattaagc 16081300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 26026804 - 26026861
Alignment:
Q  4 aaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||||||||||||||||||| | || |||||||| ||| ||||||||||||||||||    
T  26026804 aaaagataggaccattttcgtgaatttgtcaaaatagtaggaccaaaagtgtaattaa 26026861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26048020 - 26047960
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||||||||| |||||||||||| |||||||| ||||||||  | |||||||||||||||    
T  26048020 taaaaaagatatgaccattttcgtgagttggtcgaaatggtagaatcaaaagtgtaattaa 26047960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 34595265 - 34595317
Alignment:
Q  11 aggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||| ||||||||||||||  | ||||||||||||||||||||    
T  34595265 aggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 34595317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 27245266 - 27245204
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| |||||| ||||||||||||||  | ||||||||||||||||||||    
T  27245266 taaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 27245204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5334302 - 5334363
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    ||||| || |||||| |||||||| ||||||||||||||  | |||||||||||||||||||    
T  5334302 taaaagaggtaggactattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaag 5334363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 5333931 - 5333876
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagcttatt 68  Q
    |||||||||||| ||||||||||||||  | || ||||||||||||||||| ||||    
T  5333931 gaccattttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcctatt 5333876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 39388751 - 39388818
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagcttatt 68  Q
    ||||| || |||||| | |||||| ||||||||||||||  | |||||||||||||||||||| ||||    
T  39388751 taaaagaggtaggacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcatatt 39388818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 48247650 - 48247588
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| |||||| ||||| ||||||||  | ||||||||||||||||||||    
T  48247650 taaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagc 48247588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 9394215 - 9394275
Alignment:
Q  3 aaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagct 64  Q
    |||||| |||||||||||| || || |||||||||||  | |||||||||||||||||||||    
T  9394215 aaaaaggtaggaccatttttgtgagctggtcaaaatgcga-gaccaaaagtgtaattaagct 9394275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 40669706 - 40669751
Alignment:
Q  16 cattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||||||| ||||||||||||||| | || |||||||||||||||    
T  40669706 cattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaa 40669751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 787269 - 787329
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||| || ||||||||||||||| |||||||||||||   |  |||||||||||||||||    
T  787269 taaaagaggtaggaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaa 787329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 14440311 - 14440373
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  14440311 taaaaaagataggaccattttcgtaagttggtcaaaatggtaggaccaaaagtataattaagc 14440373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21034298 - 21034236
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  21034298 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 21034236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28465564 - 28465626
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  28465564 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 28465626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34789445 - 34789383
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  34789445 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 34789383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24851379 - 24851312
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagcttatt 68  Q
    |||||||||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||| ||||    
T  24851379 taaaaaagatagcaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaagcctatt 24851312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 35643616 - 35643558
Alignment:
Q  3 aaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||    
T  35643616 aaaaagataggaccattttcgtgagttggtcaaaatggtaagaccaatagtgtgattaa 35643558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 56077807 - 56077869
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||| |||||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  56077807 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaagc 56077869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 54441052 - 54441113
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    |||||||||||||||||||||||| || || ||||||||||| |||||||||||||||||||    
T  54441052 taaaaaagataggaccattttcgtgagctgatcaaaatggtaggaccaaaagtgtaattaag 54441113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41114220 - 41114160
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||||||| ||||||| ||||||||||||||||| |||||||||||| |||||    
T  41114220 taaaaaagataggacccttttcgtgagttggtcaaaatggtaggaccaaaagtgtcattaa 41114160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 12593087 - 12593025
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||| || |||||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  12593087 taaaaaaggtatgaccattttcgtgagttggtcaaactggtaggaccaaaagtgtaattaagc 12593025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 26974346 - 26974284
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||| |||||||||||| |||| || ||||||||| ||||||||||||||||||||    
T  26974346 taaaaaagatatgaccattttcgtgagtttgttaaaatggtaggaccaaaagtgtaattaagc 26974284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 36168814 - 36168876
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||| |||||| ||||||||| ||||||||||||||||| |||||| |||||||||||||    
T  36168814 taaaaaaaataggatcattttcgtgagttggtcaaaatggtaggaccaagagtgtaattaagc 36168876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 41608898 - 41608960
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| |||||| ||||||||||||||||| ||||||||||||||||||||    
T  41608898 taaaagaggtaggaccaatttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 41608960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28166067 - 28166007
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||||| | |||||||    
T  28166067 taaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaaatttaattaa 28166007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45839033 - 45839092
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||||||||||| ||| ||||||||||||| ||| ||||||||||||||||||    
T  45839033 taaaaaagataggaccattt-cgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 45839092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1397658 - 1397597
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    |||||||||||||||||||||  | ||||||||||||||||  || ||||||||||||||||    
T  1397658 taaaaaagataggaccatttttatgagttggtcaaaatggttggatcaaaagtgtaattaag 1397597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16214978 - 16215038
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||||||||| || ||||||||||||||| |||||||| || |||||||||| |||||||    
T  16214978 taaaaaagatatgatcattttcgtaagttgatcaaaatgataggaccaaaagtataattaa 16215038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 19529177 - 19529239
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| |||||| | ||||||  ||||||||||||||||||| || |||||||||||||||||    
T  19529177 taaaagagatagaatcatttttataagttggtcaaaatggtaggagcaaaagtgtaattaagc 19529239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 21034720 - 21034782
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| ||||||||||| |||||| ||||||||||||||  | |||||||| |||||||||||    
T  21034720 taaaagagataggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaagc 21034782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 33777693 - 33777635
Alignment:
Q  3 aaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||| ||| || ||||||||| ||||||||||||||||| || |||||||||||||||    
T  33777693 aaaaaaatatgatcattttcgtgagttggtcaaaatggtaggaacaaaagtgtaattaa 33777635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 46736718 - 46736656
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||| ||| |||||||||||| ||||||||||||| |||  ||||||||| |||||||||    
T  46736718 taaaaaaaataagaccattttcgtgagttggtcaaaatagtagaaccaaaagtataattaagc 46736656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 46737138 - 46737200
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| |||||| ||||||||||||||  | ||||||||||||||||||||    
T  46737138 taaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 46737200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28465144 - 28465083
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    ||||| || ||||| || |||||||||||||||||||||| | ||| |||||||||||||||    
T  28465144 taaaagaggtaggatcaatttcgtaagttggtcaaaatggaaggactaaaagtgtaattaag 28465083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34789866 - 34789927
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    ||||| || |||||||| |||||| ||||||||||||||  | |||||||||||||||||||    
T  34789866 taaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 34789927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 54440634 - 54440573
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    ||||| || |||||||| |||||| ||||||||||||||  | |||||||||||||||||||    
T  54440634 taaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 54440573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 229654 - 229702
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||| || |||||||||||  ||||||||||||||||||||    
T  229654 gaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaa 229702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6616735 - 6616675
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||||| ||| |||||||||||| ||||| |||||||| ||  |||||||||||||||||    
T  6616735 taaaaaaaataagaccattttcgtgagttgatcaaaatgatagaaccaaaagtgtaattaa 6616675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19528932 - 19528865
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagcttatt 68  Q
    ||||| || |||||||| |||||| | ||||||||||||  | |||||||||||||||||||| ||||    
T  19528932 taaaagaggtaggaccaatttcgtgaattggtcaaaatgcaaggaccaaaagtgtaattaagcctatt 19528865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 12593518 - 12593568
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| |||||| ||||||||||||||  | ||||||||||||||||||||    
T  12593518 gaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 12593568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 33689892 - 33689830
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| ||| || ||||||||||||||  | ||||||||||||||||||||    
T  33689892 taaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 33689830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 55677441 - 55677503
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| |||||| |||||||||||||   | ||||||||||||||||||||    
T  55677441 taaaagaggtaggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaagc 55677503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44219438 - 44219377
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    ||||||||| ||||||| |||||| ||||||| |||||   | |||||||||||||||||||    
T  44219438 taaaaaagagaggaccaatttcgtgagttggttaaaatacgaggaccaaaagtgtaattaag 44219377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14439891 - 14439831
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||| || ||||| |||||| ||||||||||||||  | |||||||| |||||||||    
T  14439891 taaaaaaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 14439831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 33921095 - 33921157
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  33921095 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 33921157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 38008434 - 38008496
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  38008434 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 38008496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5560114 - 5560052
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  5560114 taaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 5560052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 11539700 - 11539638
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  11539700 taaaaaaaataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 11539638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 20127799 - 20127737
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||    
T  20127799 taaaaaagataggaccattttcgtgaattggtcaaaatggtaggaccaaaagtgtaattaagc 20127737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4809362 - 4809424
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||| |||||||||||||||| |||| |||||||||||| ||||||||||||||||||||    
T  4809362 taaaaaacataggaccattttcgtgagttagtcaaaatggtaggaccaaaagtgtaattaagc 4809424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43160494 - 43160556
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||||| |||| |||||||||||| |||| |||||||||||||||    
T  43160494 taaaaaagataggaccattttcgtgagtttgtcaaaatggtaggacctaaagtgtaattaagc 43160556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 649820 - 649881
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    ||||||| |||||||||||||||| |||||||||||||| || |||||||||||||||||||    
T  649820 taaaaaaaataggaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaag 649881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 9329974 - 9329915
Alignment:
Q  2 aaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||||||||||| || ||||||||||||| ||| ||||||||||||||||||    
T  9329974 aaaaaagataggaccatttttgtgagttggtcaaaattgtaggaccaaaagtgtaattaa 9329915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4356239 - 4356301
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||| ||||||| |||| |||||||||||||| || ||||||||||||||||||||    
T  4356239 taaaaaagatatgaccattatcgtgagttggtcaaaatgataggaccaaaagtgtaattaagc 4356301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6949514 - 6949452
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||||| |||| ||||||||| || |||||||| |||||||||||    
T  6949514 taaaaaagataggaccattttcgtgagttagtcaaaatgataggaccaaaaatgtaattaagc 6949452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16952998 - 16952936
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||| ||| |||||||| ||||||||||||||||| |||||||||| |||||||||    
T  16952998 taaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagc 16952936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 17060969 - 17060907
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||| ||| |||||||| ||||||||||||||||| |||||||||| |||||||||    
T  17060969 taaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagc 17060907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 63018 - 62958
Alignment:
Q  3 aaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||| ||||||||||||||| ||||||||||||||| | ||||| ||||||||||||||    
T  63018 aaaaaggtaggaccattttcgtgagttggtcaaaatggaaggaccataagtgtaattaagc 62958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13315556 - 13315496
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||||||||| |||||||||| | ||||||||||||||||| ||| ||||||||||||||    
T  13315556 taaaaaagatatgaccattttcatgagttggtcaaaatggtaggacaaaaagtgtaattaa 13315496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 42192303 - 42192241
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || ||||||||||||||| ||||||||||||||  | ||||||||||||||||||||    
T  42192303 taaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 42192241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 42192726 - 42192788
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || ||||||||||||||| ||||||||||||||  | ||||||||||||||||||||    
T  42192726 taaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagc 42192788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15551158 - 15551218
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||||| ||| ||||||||| || ||||||||||||||||| | ||||||||||||||||    
T  15551158 taaaaaatatatgaccatttttgtgagttggtcaaaatggtagggccaaaagtgtaattaa 15551218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 11540121 - 11540188
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagcttatt 68  Q
    ||||| || ||||||||||||||| ||||||||||||||  | |||||||||| ||||||||| ||||    
T  11540121 taaaagaggtaggaccattttcgtgagttggtcaaaatgcgatgaccaaaagtataattaagcctatt 11540188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 649590 - 649528
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| ||||||||||||||||| |||  | ||||||||||||||||||||    
T  649590 taaaagaggtaggaccaatttcgtaagttggtcaagatgcaaggaccaaaagtgtaattaagc 649528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 14942341 - 14942391
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||| || |||||||||||  ||||||||||||||||||||||    
T  14942341 gaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaagc 14942391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24140157 - 24140219
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||| ||||||||||||||| |||||||||| |||  | || |||||||||||||||||    
T  24140157 taaaaaaggtaggaccattttcgtgagttggtcaagatgcgaggaacaaaagtgtaattaagc 24140219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38008013 - 38007951
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| |||||| ||||||||||||||  | ||||||||||||||||||||    
T  38008013 taaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 38007951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 44219707 - 44219645
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||| ||||| |||||| || ||||| ||||||||| | ||||||||||||||||||||    
T  44219707 taaaaaaggtaggatcatttttgtgagttgatcaaaatggaaggaccaaaagtgtaattaagc 44219645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 44220128 - 44220190
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||| || |||||||||||| ||||||||||||||  | ||| ||||||||||||||||    
T  44220128 taaaaaaggtatgaccattttcgtgagttggtcaaaatgcgaggacaaaaagtgtaattaagc 44220190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 6949936 - 6949989
Alignment:
Q  10 taggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||| |||||| ||||||||||||||  | ||||||||||||||||||||    
T  6949936 taggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 6949989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 25336092 - 25336145
Alignment:
Q  10 taggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||| |||||| ||||||||||||||  | ||||||||||||||||||||    
T  25336092 taggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 25336145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 13399914 - 13399964
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||| ||||||||||||||||| ||| |||| || ||||||||    
T  13399914 gaccattttcgtgagttggtcaaaatggtaggactaaaattgcaattaagc 13399964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16953417 - 16953479
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| |||| | ||||||||||||||  | ||||||||||||||||||||    
T  16953417 taaaagaggtaggaccaatttcatgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 16953479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 20128220 - 20128282
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| |||||| ||||||| ||||||  | ||||||||||||||||||||    
T  20128220 taaaagaggtaggaccaatttcgtgagttggtaaaaatgcaaggaccaaaagtgtaattaagc 20128282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 31797272 - 31797322
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||| || |||||||||||  | ||||||||||||||||||||    
T  31797272 gaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaattaagc 31797322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 32418213 - 32418160
Alignment:
Q  10 taggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||| |||||| ||||||||||||||  | ||||| ||||||||||||||    
T  32418213 taggaccaatttcgtgagttggtcaaaatgcaaggaccataagtgtaattaagc 32418160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 28143522 - 28143574
Alignment:
Q  11 aggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||| || |||||||||||  | ||||||||||| ||||||||    
T  28143522 aggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagc 28143574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18428245 - 18428305
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  18428245 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 18428305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 599981 - 600048
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagcttatt 68  Q
    ||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  599981 taaaaaagatatgaccattttcgttagttggtcaaaatggtaggaccaaaagtgtaattaagcctatt 600048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5730880 - 5730818
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  5730880 taaaaaagataggactattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 5730818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 15256314 - 15256376
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  15256314 taaaaaagataggaccattttcatgagttggtcaaaatggtaggaccaaaagtgtaattaagc 15256376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 41260334 - 41260272
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  41260334 taaaaaagataggaccattttcatgagttggtcaaaatggtaggaccaaaagtgtaattaagc 41260272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9797210 - 9797270
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  9797210 taaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 9797270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 18049653 - 18049595
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaatt 59  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  18049653 taaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatt 18049595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34799142 - 34799080
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  34799142 taaaaaaaataggaccattttcatgagttggtcaaaatggtatgaccaaaagtgtaattaagc 34799080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2208777 - 2208716
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    ||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||||||    
T  2208777 taaaaaagataggacaattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaag 2208716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28254488 - 28254427
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    ||||| |||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  28254488 taaaatagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaag 28254427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 16578581 - 16578641
Alignment:
Q  3 aaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||  ||||||||||| |||| |||||||||||| ||||||||||||||||||||    
T  16578581 aaaaagatataaccattttcgtgagttcgtcaaaatggtaggaccaaaagtgtaattaagc 16578641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 35426895 - 35426845
Alignment:
Q  11 aggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||||| ||||||||||||||||| ||| ||||||||||||||    
T  35426895 aggaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaa 35426845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 15255916 - 15255854
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| |||||| ||||||||||||||  | ||||||||||||||||||||    
T  15255916 taaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 15255854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28254909 - 28254971
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| |||||| ||||||||||||||  | ||||||||||||||||||||    
T  28254909 taaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 28254971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35427295 - 35427357
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || ||| ||||||||||| ||||||||||||||  | ||||||||||||||||||||    
T  35427295 taaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagc 35427357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 42035835 - 42035773
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || ||| ||||||||||| ||||||||||||||  | ||||||||||||||||||||    
T  42035835 taaaagaggtagaaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 42035773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35694361 - 35694421
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||  |||||||||||| || |||| |||||||||| | ||||||||||||||||||    
T  35694361 taaaaaatgtaggaccatttttgtgagttagtcaaaatggaaggaccaaaagtgtaattaa 35694421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 28877385 - 28877432
Alignment:
Q  14 accattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||||||||| ||||||||||||||  | ||||||||||||||||||    
T  28877385 accattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 28877432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9796789 - 9796727
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| ||| || ||||||||||||||  | ||||||||||||||||||||    
T  9796789 taaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 9796727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 34799566 - 34799628
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| |||||| | ||||||||||||  | ||||||||||||||||||||    
T  34799566 taaaagaggtaggaccaatttcgttaattggtcaaaatgaaaggaccaaaagtgtaattaagc 34799628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 35693916 - 35693867
Alignment:
Q  16 cattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagctt 65  Q
    ||||||||||| ||||||||||||  | || |||||||||||||||||||    
T  35693916 cattttcgtaaattggtcaaaatgcaaggatcaaaagtgtaattaagctt 35693867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 8419103 - 8419165
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  8419103 taaaaaagataggaccatattcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 8419165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28290127 - 28290189
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  28290127 taaaaatgataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 28290189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 18149796 - 18149734
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||||| |||||||| |||||||| || |||||||||||||||||    
T  18149796 taaaaaagataggaccattttcgtgagttggtccaaatggtaggatcaaaagtgtaattaagc 18149734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14340461 - 14340401
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||||    
T  14340461 taaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaaatgtaattaa 14340401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15029792 - 15029859
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagcttatt 68  Q
    |||||||| || |||||||||||| ||||||||||||||| | |||||||||||||||||||| ||||    
T  15029792 taaaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaagtgtaattaagcctatt 15029859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 19291419 - 19291357
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||||||||||||| || ||||| ||||||| ||| ||||||||||||||||||||    
T  19291419 taaaaaagataggaccatttttgtgagttgttcaaaatagtaggaccaaaagtgtaattaagc 19291357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 15115575 - 15115637
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || ||||||||||||||| ||||||||||||||  | || |||||||||||||||||    
T  15115575 taaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggatcaaaagtgtaattaagc 15115637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 32697709 - 32697771
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| |||||| ||||||||||||||  | ||||||||||||||||||||    
T  32697709 taaaagaggtaggaccaatttcgtgagttggtcaaaatgcaatgaccaaaagtgtaattaagc 32697771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39083421 - 39083361
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    ||||||| |||||||||||||||| |||||||||||||| || || | ||||||||||||||    
T  39083421 taaaaaaaataggaccattttcgtgagttggtcaaaatgataggatc-aaagtgtaattaag 39083361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 41834552 - 41834604
Alignment:
Q  11 aggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||| || |||||||||||  | ||||||||||||||||||||    
T  41834552 aggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagc 41834604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38900707 - 38900648
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaatta 60  Q
    ||||| || ||||| ||||||||| ||||||||||||||  | |||||||||||||||||    
T  38900707 taaaagaggtaggatcattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatta 38900648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 4967266 - 4967316
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||| || ||||||||||||||  | ||||||||||||||||||||    
T  4967266 gaccatttttgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 4967316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 10721837 - 10721771
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagcttattctaaaatgaga 79  Q
    |||||||||||| || |||||||||||  | |||||||| ||||||||||| |||| ||||| ||||    
T  10721837 gaccattttcgtgagctggtcaaaatgtgaggaccaaaaatgtaattaagcatattttaaaaagaga 10721771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 27307112 - 27307062
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||| ||||||||||||||||  |  |||||||||||||||||||    
T  27307112 gaccattttcataagttggtcaaaatgcgagaaccaaaagtgtaattaagc 27307062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 38901123 - 38901185
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||| | |||||||||||||||   || |||||||||| | ||||||||||||||||||||    
T  38901123 taaaaagggtaggaccattttcgtgctttagtcaaaatggaaggaccaaaagtgtaattaagc 38901185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 4966863 - 4966819
Alignment:
Q  17 attttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||| ||||||||||||||  | ||||||||||||||||||    
T  4966863 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 4966819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 16753066 - 16753114
Alignment:
Q  14 accattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    ||||||||||| ||||||||||||||  | |||||||| ||||||||||    
T  16753066 accattttcgtgagttggtcaaaatgcgatgaccaaaaatgtaattaag 16753114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21370749 - 21370689
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||  ||||||||||| ||||||||||||| ||| ||| |||| | |||||||    
T  21370749 taaaaaagatataaccattttcgtcagttggtcaaaatagtaggacaaaaaatataattaa 21370689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 37505130 - 37505068
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  37505130 taaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 37505068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34555865 - 34555926
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  34555865 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaag 34555926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 37421429 - 37421488
Alignment:
Q  2 aaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||    
T  37421429 aaaaaagataggaccattttcgtgagttggtcaaaatggtatgactaaaagtgtaattaa 37421488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10279030 - 10279092
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||||| |||||||||||| |||| || |||||||||||||||||    
T  10279030 taaaaaagataggaccattttcgtgagttggtcaaaacggtaggatcaaaagtgtaattaagc 10279092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21938626 - 21938566
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||||||||| || ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  21938626 taaaaaagataagatcattttcgtgagttgatcaaaatggtaagaccaaaagtgtaattaa 21938566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9992218 - 9992155
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtc-aaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||| ||| |||||||| ||||||||| ||||||||||||||||||||    
T  9992218 taaaaaagataggaccatttccgtgagttggtcaaaaatggtaggaccaaaagtgtaattaagc 9992155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50305268 - 50305328
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||||||||||||| | ||||||| |||||||||  |||||||||||||||||    
T  50305268 taaaaaagataggaccattttcatgagttggttaaaatggtagaaccaaaagtgtaattaa 50305328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9992638 - 9992700
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||| | |||| |||||||||  | ||||||||||||||||||||    
T  9992638 taaaaaagataggaccattttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaagc 9992700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 29439405 - 29439465
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||||| ||||||||| ||||| ||||||||||  ||||||||||| ||||||    
T  29439405 taaaaaagataggatcattttcgtgagttgatcaaaatggtgggaccaaaagtgcaattaa 29439465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 30787283 - 30787343
Alignment:
Q  3 aaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||| |||||||||||| ||||| || |||||||| || |||||||||||||||||    
T  30787283 aaaaagatatgaccattttcgtgagttgatctaaatggtaggatcaaaagtgtaattaagc 30787343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 45048218 - 45048158
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||| || ||| ||||||||||||||||||||||||||  | ||||||||||||||||||    
T  45048218 taaaagaggtagaaccattttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaa 45048158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 44582544 - 44582603
Alignment:
Q  3 aaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    |||| |||| |||||||||||| ||||| |||||||||||  ||||||||||||||||||    
T  44582544 aaaatgatatgaccattttcgtgagttgatcaaaatggtagaaccaaaagtgtaattaag 44582603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16299164 - 16299226
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||| |||||||||||||||  ||||| ||||||||||| ||| |||||| |||||||||    
T  16299164 taaaaaaaataggaccattttcgcgagttgatcaaaatggtaggacaaaaagtataattaagc 16299226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 23340246 - 23340184
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| ||||||||||| |||||| ||||||||||||||  | || |||||||||||||||||    
T  23340246 taaaagagataggaccaatttcgtgagttggtcaaaatgcaatgatcaaaagtgtaattaagc 23340184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29438993 - 29438931
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||| |||||| ||||||||||||||  | ||||||||||||||||||||    
T  29438993 taaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 29438931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44582120 - 44582059
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    ||||| || |||||||| |||||| ||||||||||||||  | |||||||||||||||||||    
T  44582120 taaaagaggtaggaccaatttcgttagttggtcaaaatgtaaggaccaaaagtgtaattaag 44582059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 50304490 - 50304441
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    |||||||||||| ||||||||||||||  | |||||||||||||||||||    
T  50304490 gaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaag 50304441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 17641864 - 17641912
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||| ||||||||||||||  | ||||||||||||||||||    
T  17641864 gaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 17641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 44954709 - 44954773
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagctt 65  Q
    |||||||| || || ||||||| | ||||||||||||||  | ||||||||||||||||||||||    
T  44954709 taaaaaaggtatgatcattttcatgagttggtcaaaatgcgaggaccaaaagtgtaattaagctt 44954773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 50926735 - 50926786
Alignment:
Q  12 ggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||||| || |||||||||||  | ||||||||||||||||||||    
T  50926735 ggaccattttcgtgagctggtcaaaatgcgatgaccaaaagtgtaattaagc 50926786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 2868191 - 2868253
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || |||||||||||||||  |||||||||||||  | || |||||||||||||||||    
T  2868191 taaaagaggtaggaccattttcgtgtgttggtcaaaatgtgaggatcaaaagtgtaattaagc 2868253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 23526711 - 23526657
Alignment:
Q  11 aggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagctt 65  Q
    |||||||||||||| || |||||||||||  | |||||||||||||| |||||||    
T  23526711 aggaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaactaagctt 23526657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2867974 - 2867913
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    ||||| ||||| || ||||||||| ||||||||||||||  | |||||||| ||||||||||    
T  2867974 taaaagagatatgatcattttcgtgagttggtcaaaatgcgatgaccaaaattgtaattaag 2867913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10278611 - 10278550
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    ||||| || ||||| || |||||| ||||||||||||||  | |||||||||||||||||||    
T  10278611 taaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 10278550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 37421211 - 37421163
Alignment:
Q  13 gaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||| |||||| | ||||||||||||  ||||||||||||||||||||    
T  37421211 gaccaatttcgtgaattggtcaaaatgcaaagaccaaaagtgtaattaa 37421163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44954289 - 44954229
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||| || |||||||||||| |||||||||||||||   ||| |||| |||||||||    
T  44954289 taaaaaaggtatgaccattttcgtgagttggtcaaaatgggtggacaaaaaatgtaattaa 44954229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 46759 - 46813
Alignment:
Q  9 ataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  46759 ataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 46813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 46329 - 46267
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||| || ||| ||||||||||||||||||||||||||  | ||||||||||| ||||||||    
T  46329 taaaagaggtagaaccattttcgtaagttggtcaaaatgcgaggaccaaaagtgcaattaagc 46267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 25472496 - 25472558
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||| |||||||||||| ||||||||||||||||| || |||||||||||||||||    
T  25472496 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaagc 25472558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24640668 - 24640728
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||||| |||||||    
T  24640668 taaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtataattaa 24640728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5114531 - 5114469
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||||| ||||| ||||||||||| || ||||| |||||||||||    
T  5114531 taaaaaagataggaccattttcgtgagttgatcaaaatggtaggatcaaaaatgtaattaagc 5114469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 31573782 - 31573721
Alignment:
Q  2 aaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||| ||||||| |||||||| ||||||||||||||||| |||||||||| |||||||||    
T  31573782 aaaaaaaataggactattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagc 31573721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 29891577 - 29891629
Alignment:
Q  11 aggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||||   ||||||||||||||||| ||||||||||||||||||||    
T  29891577 aggaccattttcacgagttggtcaaaatggtaggaccaaaagtgtaattaagc 29891629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 30251175 - 30251237
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    ||||||||||| ||| ||||| || ||||||||||||| ||| || |||||||||||||||||    
T  30251175 taaaaaagatatgacaatttttgtgagttggtcaaaatagtaggatcaaaagtgtaattaagc 30251237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 31073206 - 31073144
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||||||||||| |  ||||||||||||   | ||||||||||||||||||||    
T  31073206 taaaaaagataggaccattttcatgtgttggtcaaaattaaaggaccaaaagtgtaattaagc 31073144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 22534217 - 22534269
Alignment:
Q  11 aggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||||| |||||||||||||   | ||||||||||||||||||||    
T  22534217 aggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagc 22534269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25468912 - 25468852
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaa 61  Q
    ||||| ||||| ||||| |||||| ||||||||||||||  | ||||||||||||||||||    
T  25468912 taaaagagatatgaccaatttcgtgagttggtcaaaatgtaaggaccaaaagtgtaattaa 25468852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 30250775 - 30250722
Alignment:
Q  10 taggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||| |||||| ||||||||||||||  | |||||||| |||||||||||    
T  30250775 taggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaagc 30250722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 5120970 - 5121014
Alignment:
Q  19 tttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||| ||||||||||||||  | ||||||||||||||||||||    
T  5120970 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 5121014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 31574226 - 31574270
Alignment:
Q  19 tttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||| ||||||||||||||  | ||||||||||||||||||||    
T  31574226 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 31574270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6455 - 6393
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||| ||||||||| | ||||| ||||||||||| ||||||||||| ||||||||    
T  6455 taaaaaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaagc 6393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6473 - 6411
Alignment:
Q  1 taaaaaagataggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||| ||||||||| | ||||| ||||||||||| ||||||||||| ||||||||    
T  6473 taaaaaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaagc 6411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 210830 - 210882
Alignment:
Q  11 aggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaagc 63  Q
    |||||||||||| | ||||||||||||||  | ||||||||||||||||||||    
T  210830 aggaccattttcatgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 210882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 205860 - 205911
Alignment:
Q  11 aggaccattttcgtaagttggtcaaaatggtaagaccaaaagtgtaattaag 62  Q
    |||||||||||||| ||||||||||||||  | ||| |||||||||||||||    
T  205860 aggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaag 205911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University