View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14395_high_19 (Length: 418)
Name: NF14395_high_19
Description: NF14395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14395_high_19 |
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Alignment Details
Target: chr6 (Bit Score: 355; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 22 - 408
Target Start/End: Complemental strand, 28994716 - 28994330
Alignment:
| Q |
22 |
aatgcatatgattttcctgcaacatgacatttgctttttaacaaagactgaactacctttcaaatgagcgacttcagaaatcgaaccggagttcttttca |
121 |
Q |
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| T |
28994716 |
aatgcatatgattttcctgcaacatgacatttgctttttaataaagactggactacctttcaaatgagcgactttaaaaatcgaaccggagttcttttca |
28994617 |
T |
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| Q |
122 |
taagggaaaatcatgttatcaactcttgcaagattttggttgatttttctgcactactgtaaaataactattagttgcattcaacttaataaaaaatttc |
221 |
Q |
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| T |
28994616 |
taagggaaaatcatgttatcaactcttgcaagattttggttgatttttctgcactattgtaaaataactattagttgcattcaacttaataaaaaatttc |
28994517 |
T |
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| Q |
222 |
ctcttctcaaactttatttaaaaatatagttatatatgtctactaagctcaatatatgataataacattttcctcttcctaccaaattaatcattaacat |
321 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |
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| T |
28994516 |
ctcttctcaaactttatttaaaaatatagttatatatgtctacaaagctcaatatatgataataacattttcctctttctaacaaattaatcattaacat |
28994417 |
T |
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| Q |
322 |
ttatctataaaaatcgtttttgtttgttctacatgtaccaaagattttgcaactaaattatgtatgttggaaaattatttatatttt |
408 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28994416 |
ttatctataaaaatcgtttttgtttgttctacatgtaccaaagattttgcaactaaattatgtatgttggaaaattatttatatttt |
28994330 |
T |
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