View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14395_low_25 (Length: 386)
Name: NF14395_low_25
Description: NF14395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14395_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 107 - 371
Target Start/End: Original strand, 39978969 - 39979233
Alignment:
| Q |
107 |
aaaggaagtccattgtttcctattccagaataaccaccagcaaatgtcatgaagttcttctggtccttcaaaccagcatcagttggtacatttcttgcac |
206 |
Q |
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| T |
39978969 |
aaaggaagtccattgtttcctattccagaataaccaccagcaaatgtcatgaagttcttctggtccttcaaaccagcatcagttggtacatttcttgcac |
39979068 |
T |
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| Q |
207 |
ttgttgtagccacaacaagagcaagaaccaacaacaacatacaccacttcgccatatctctcccacttactaggaatatgtataataactgcactcactc |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39979069 |
ttgttgtagccacaacaagagcaagaaccaacaacaacatacaccacttcgccatatctctcccacttactaggaatatgtataataactgcactcactc |
39979168 |
T |
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| Q |
307 |
tcgctctccctttgtgtcttaacctgagtacttgtgtggcaaagtgtgtttggggagtatctttt |
371 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39979169 |
tcactctccctttgtgtcttaacctgagtacttgtgtggcaaagtgtgtttggggagtatctttt |
39979233 |
T |
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