View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14395_low_39 (Length: 299)
Name: NF14395_low_39
Description: NF14395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14395_low_39 |
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Alignment Details
Target: chr1 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 8 - 282
Target Start/End: Original strand, 2134530 - 2134804
Alignment:
| Q |
8 |
agcacagaacccaaagaaactgattttattctttgatcgttttgcatgaagaaaagaagacatttgtatgtttctgctctctgcatgtgtcccaagccta |
107 |
Q |
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| T |
2134530 |
agcacagaacccaaagaaactgattttattctttgatcgttttgcatgaagaaaagaagacatttgtatgtttctgctctctgcatgtgtcccaagccta |
2134629 |
T |
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| Q |
108 |
gatagtgataggtcataagtgcttcaataataagataaagctaaaaacgtaacataacagatcaatttttaaccttgagccaactaggcacattgctctt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2134630 |
gatagtgataggtcataagtgcttcaataataagataaagctaaaaacgtaacataacagatcaatttttaaccttgagccaactaggcacattgctctt |
2134729 |
T |
|
| Q |
208 |
gtaccctgttgctaatattattacatcaaattccttttcttgtccatccaaaaattttgcaccatttcttgttat |
282 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2134730 |
gtaccctgttgctaatattattgcatcaaattccttttcttgtccatccaaaaattttgcaccatttcttgttat |
2134804 |
T |
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